Citrus Sinensis ID: 025587

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEEEcccccccccHHHHHHHHHHcccEEEEEEcccccccccccccccccccEEEcccEEEEccHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHccccEEEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccEEEccccccccccccccccccccccccHHHHHHccccHHHcccccccccccccccEEEEccccccEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccEEEEccHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHcccccEEEEEEEccEcccccccccccccccccccccHHHHHHHHHccccEEEEEccEEEcccccccHHHHHHccc
Coil and Loop (DISEMBL)
matlassssslllssppsklaqaslppslrlsfssySHLSslvsispssflacpassrrssvsaFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKEllgsghevtimtvgdensdkmkkppfnrFNEIVsaggktvwgdpaevgnvvGGVTFDVVldnngknldavrpvadwakssgvkQFLFISsagiykpadepphvegdvvkpdaghVQVEKYISENfsnwasfrpqymigsgnnkdcEEWFFDRK
Flexible Loop (DISEMBL)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVkasaaekkkvlivntnsgghAVIGFYLAKELLGSGHEVTIMTVgdensdkmkkpPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWasfrpqymigsgnnkDCEEWFFDRK
Low Complexity Region (SEG)
MATlassssslllssppsklaqaslppslrlsfssyshlsslvsispssflACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Disordered region (IsUnstruct)
************************************************************************EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV************FNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP*********DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFF***
Disordered Region (DISOPRED)
****************************************************************************VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Disordered Region (DISEMBL)
**************************PSLRLSFSSYSHLSSLVSISPSS*******************ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Disordered Region (DISPRO)
*************************************************FL************AFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q9LYA9	406	Chloroplast stem-loop bin	yes	no	0.776	0.477	0.815	2e-91
Q9SA52	378	Chloroplast stem-loop bin	no	no	0.688	0.455	0.335	1e-18

>sp|Q9LYA9|CP41A_ARATH Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1

 Score =  335 bits (858), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 159/195 (81%), Positives = 172/195 (88%), Gaps = 1/195 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60  TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query: 235 GSGNNKDCEEWFFDR 249
           GSGNNKDCEEWFFDR
Sbjct: 240 GSGNNKDCEEWFFDR 254

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA52|CP41B_ARATH Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 16/188 (8%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
           SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query: 130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct: 103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
            SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct: 161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query: 242 CEEWFFDR 249
            EEWFF R
Sbjct: 221 VEEWFFHR 228

Binds and cleaves RNA, particularly in stem-loops. Associates with pre-ribosomal particles in chloroplasts, and participates in chloroplast ribosomal RNA metabolism, probably during the final steps of 23S rRNA maturation. May enhance transcription by the plastid-encoded polymerase and translation in plastid via the stabilization of ribosome assembly intermediates. Required for chloroplast integrity. Involved in the regulation of the circadian system. Involved in the regulation of heteroglycans and monosaccharide mobilization.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
224066507	404	predicted protein [Populus trichocarpa]	0.8	0.495	0.85	2e-95
224082634	377	predicted protein [Populus trichocarpa]	0.792	0.525	0.833	2e-93
343172517	384	chloroplast stem-loop binding protein, p	0.82	0.533	0.786	9e-91
357440743	401	MRNA-binding protein [Medicago truncatul	0.988	0.615	0.701	1e-90
343172519	384	chloroplast stem-loop binding protein, p	0.82	0.533	0.786	1e-90
225436924	397	PREDICTED: uncharacterized protein At3g6	0.772	0.486	0.816	2e-90
297821230	408	hypothetical protein ARALYDRAFT_486816 [	0.776	0.475	0.815	4e-90
32746733	405	mRNA-binding protein precursor, partial	0.776	0.479	0.814	4e-90
15229384	406	chloroplast stem-loop binding protein-41	0.776	0.477	0.815	1e-89
449444637	409	PREDICTED: chloroplast stem-loop binding	0.768	0.469	0.812	8e-89

>gi|224066507|ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 170/200 (85%), Positives = 181/200 (90%)

Query: 50  FLACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
           F A P  SRR   S+FTVKASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGHEVTI+T
Sbjct: 53  FAAQPICSRRLFTSSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILT 112

Query: 110 VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRP 169
           VG+E+SDKMKKPPF+RF+EIVSAGGKTVWG+PAEVG VV G  FDVVLDNNGK+LDAVRP
Sbjct: 113 VGEESSDKMKKPPFSRFSEIVSAGGKTVWGNPAEVGKVVEGAAFDVVLDNNGKDLDAVRP 172

Query: 170 VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFR 229
           V DWAKS+GVKQFLFISSAGIYK  DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FR
Sbjct: 173 VVDWAKSAGVKQFLFISSAGIYKATDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFR 232

Query: 230 PQYMIGSGNNKDCEEWFFDR 249
           PQYMIGSGNNKDCEEWFFDR
Sbjct: 233 PQYMIGSGNNKDCEEWFFDR 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082634|ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|222856222|gb|EEE93769.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/198 (83%), Positives = 178/198 (89%)

Query: 52  ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG 111
           A P  SRR   S+F VKASAAEKKK+LIVNTNSGGHAVIGFY AKELLGSGHEV+I+TVG
Sbjct: 28  AYPTCSRRLFASSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVG 87

Query: 112 DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
           +E+SDKMKKPPF+RF+EIV AGGKTVWG+PAEVG  V G TFDVVLDNNGK+LD VRPV 
Sbjct: 88  EESSDKMKKPPFSRFSEIVGAGGKTVWGNPAEVGKAVEGATFDVVLDNNGKDLDTVRPVV 147

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQ 231
           DWAKS+GVKQFLFISSAGIYKP DEPPHVEGDVVK DAGHV VEKYI+E FS+WA FRPQ
Sbjct: 148 DWAKSAGVKQFLFISSAGIYKPTDEPPHVEGDVVKADAGHVGVEKYIAEIFSSWAIFRPQ 207

Query: 232 YMIGSGNNKDCEEWFFDR 249
           YMIGSGNNKDCEEWFFDR
Sbjct: 208 YMIGSGNNKDCEEWFFDR 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172517|gb|AEL98962.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 162/206 (78%), Positives = 179/206 (86%), Gaps = 1/206 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNTNSGGHAVIGFY AKELL SGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTNSGGHAVIGFYFAKELLASGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDR 249
           +WASFRPQYMIGSGNNKDCEEWFFDR
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDR 233

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440743|ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] gi|355479697|gb|AES60900.1| MRNA-binding protein [Medicago truncatula]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 176/251 (70%), Positives = 199/251 (79%), Gaps = 4/251 (1%)

Query: 1   MATLASSSSSLLLSSPPSKLAQASLPPSLRLSFSSYSHLSSLVSISPSSFLACPA--SSR 58
           MA LASSS +LL +S  S L    L  S  L  S  S L S      S+FL+ P+  S R
Sbjct: 1   MAMLASSSPTLLFTSTSSNLLP--LSHSCTLRLSFSSSLQSTSLSISSTFLSHPSLTSKR 58

Query: 59  RSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM 118
            ++ +  ++ ASAAEKKKVLI+NTNSGGHAVIGFY AKELLG+GH VTI+TVGDE+SDKM
Sbjct: 59  LANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVTILTVGDESSDKM 118

Query: 119 KKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG 178
           KKPPFNRF+EIVSAGG TVWG+PA+VG+VVGG  FDVVLDNNGK+L++VRPV DWAKS+G
Sbjct: 119 KKPPFNRFSEIVSAGGSTVWGNPADVGSVVGGEAFDVVLDNNGKDLESVRPVIDWAKSAG 178

Query: 179 VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGN 238
            KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI E F +WA FRPQYM GSGN
Sbjct: 179 AKQFLFISSAGIYKTTDEPPHVEGDAVKADAGHVGVEKYIEETFDSWAVFRPQYMTGSGN 238

Query: 239 NKDCEEWFFDR 249
           NKDCEEWFFDR
Sbjct: 239 NKDCEEWFFDR 249

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172519|gb|AEL98963.1| chloroplast stem-loop binding protein, partial [Silene latifolia]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 162/206 (78%), Positives = 180/206 (87%), Gaps = 1/206 (0%)

Query: 45  ISPSSFLACPASSRRSSV-SAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH 103
           I P + L  PA  R S+V S+F++ AS   KKKVLIVNT+SGGHAVIGFY AKELLGSGH
Sbjct: 28  IHPETTLFFPALCRNSNVGSSFSINASTGSKKKVLIVNTSSGGHAVIGFYFAKELLGSGH 87

Query: 104 EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN 163
           +VT+ TVGDE+SDKMKKPPFNRF+EI SAGGKTVWG+PAEVG VVG  +FDVVLDNNGK+
Sbjct: 88  QVTVFTVGDESSDKMKKPPFNRFSEITSAGGKTVWGNPAEVGKVVGEESFDVVLDNNGKD 147

Query: 164 LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS 223
           L+ VRPV DWAKSSGV+QFLFISSAGIYKP DEPPHVEGDVVK DA HV VE+YIS+ FS
Sbjct: 148 LETVRPVVDWAKSSGVEQFLFISSAGIYKPTDEPPHVEGDVVKADASHVAVEEYISQTFS 207

Query: 224 NWASFRPQYMIGSGNNKDCEEWFFDR 249
           +WASFRPQYMIGSGNNKDCEEWFFDR
Sbjct: 208 SWASFRPQYMIGSGNNKDCEEWFFDR 233

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436924|ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis vinifera] gi|147789789|emb|CAN73874.1| hypothetical protein VITISV_039540 [Vitis vinifera]

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/196 (81%), Positives = 172/196 (87%), Gaps = 3/196 (1%)

Query: 54  PASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE 113
           P S++R S S   VKA   +KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTIMTVG+E
Sbjct: 53  PTSTKRLSFSTLNVKA---QKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEE 109

Query: 114 NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADW 173
           NSDKMKKPPF+RF+EI SAGGKTVWGDPAEVG VV G  FDVVLDNNGK++D VRPV DW
Sbjct: 110 NSDKMKKPPFSRFSEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDIDTVRPVVDW 169

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYM 233
           AKSSGV+QFLFISSAGIYKP DEPPHVEGD+VK DAGHV VE YISE F +WA FRPQYM
Sbjct: 170 AKSSGVEQFLFISSAGIYKPTDEPPHVEGDIVKADAGHVGVETYISEVFGSWAIFRPQYM 229

Query: 234 IGSGNNKDCEEWFFDR 249
           IGSGNNKDCEEWFFDR
Sbjct: 230 IGSGNNKDCEEWFFDR 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821230|ref|XP_002878498.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata] gi|297324336|gb|EFH54757.1| hypothetical protein ARALYDRAFT_486816 [Arabidopsis lyrata subsp. lyrata]

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 159/195 (81%), Positives = 173/195 (88%), Gaps = 1/195 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  +KK VLIVNTNSGGHAVIGFY AKELL +GH VTIMTVGDE+
Sbjct: 62  TSRRLSPQGFTVKASSVGDKKNVLIVNTNSGGHAVIGFYFAKELLSAGHGVTIMTVGDES 121

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           SDKMKKPPFNRF+EI+S GGKTVWG+PA+V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 122 SDKMKKPPFNRFSEIISGGGKTVWGNPADVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 181

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 182 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVAVEKYLAETFGNWASFRPQYMI 241

Query: 235 GSGNNKDCEEWFFDR 249
           GSGNNKDCEEWFFDR
Sbjct: 242 GSGNNKDCEEWFFDR 256

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 158/194 (81%), Positives = 172/194 (88%)

Query: 56  SSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS 115
           S R S+   FTV+ASAAEKKKVLIVNTNSGGHAVIGFY AKELLGSGH+VTI+TVG+E+S
Sbjct: 60  SRRFSTFQYFTVQASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESS 119

Query: 116 DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAK 175
           DKMKK PFNRF+EI  AGG+T+WGDPA+VG ++ G  FD VLDNNGK+LDAVRPVADWAK
Sbjct: 120 DKMKKTPFNRFSEITGAGGRTIWGDPADVGKILEGEVFDAVLDNNGKDLDAVRPVADWAK 179

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
           SSG KQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYISE F +WASFRPQYMIG
Sbjct: 180 SSGAKQFLFISSAGIYKSTDEPPHVEGDAVKADAGHVGVEKYISEIFDSWASFRPQYMIG 239

Query: 236 SGNNKDCEEWFFDR 249
           SGNNKDCEEWFFDR
Sbjct: 240 SGNNKDCEEWFFDR 253

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229384|ref|NP_191873.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana] gi|75311698|sp|Q9LYA9.1|CP41A_ARATH RecName: Full=Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic; Short=CSP41-a; Flags: Precursor gi|16226201|gb|AAL16101.1|AF428269_1 AT3g63140/T20O10_240 [Arabidopsis thaliana] gi|7573443|emb|CAB87759.1| mRNA binding protein precursor-like [Arabidopsis thaliana] gi|16649035|gb|AAL24369.1| mRNA binding protein precursor-like [Arabidopsis thaliana] gi|22136252|gb|AAM91204.1| mRNA binding protein precursor-like [Arabidopsis thaliana] gi|332646919|gb|AEE80440.1| chloroplast stem-loop binding protein-41 [Arabidopsis thaliana]

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 159/195 (81%), Positives = 172/195 (88%), Gaps = 1/195 (0%)

Query: 56  SSRRSSVSAFTVKASA-AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
           +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct: 60  TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query: 115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
           S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct: 120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query: 175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
           KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct: 180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query: 235 GSGNNKDCEEWFFDR 249
           GSGNNKDCEEWFFDR
Sbjct: 240 GSGNNKDCEEWFFDR 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444637|ref|XP_004140080.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Cucumis sativus]

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 156/192 (81%), Positives = 174/192 (90%)

Query: 58  RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK 117
           R S+V +F+V+AS++ KKKVLIVNTNSGGHAVIGFY AK+LLGSGHEVTI+TVG+++SDK
Sbjct: 66  RPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDK 125

Query: 118 MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
           M KPPFNRF+EIVS GGKTVWGDPAE+G VV G +FDVVLDNNGK++D VRPV DWAKSS
Sbjct: 126 MNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSS 185

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSG 237
           GVKQFLFISSAGIYK  DEPPHVEGD VK DAGHV VEKYI+E FS+WA FRPQYMIGSG
Sbjct: 186 GVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQYMIGSG 245

Query: 238 NNKDCEEWFFDR 249
           NNKDCEEWFFDR
Sbjct: 246 NNKDCEEWFFDR 257

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2099222	406	CSP41A "AT3G63140" [Arabidopsi	0.776	0.477	0.815	1.3e-84
TAIR|locus:2203028	378	CRB "chloroplast RNA binding"	0.688	0.455	0.335	1.9e-20

TAIR|locus:2099222 CSP41A "AT3G63140" [Arabidopsis thaliana (taxid:3702)]

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 159/195 (81%), Positives = 172/195 (88%)

Query:    56 SSRRSSVSAFTVKASAA-EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN 114
             +SRR S   FTVKAS+  EKK VLIVNTNSGGHAVIGFY AKELL +GH VTI+TVGDE+
Sbjct:    60 TSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTVGDES 119

Query:   115 SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWA 174
             S+KMKKPPFNRF+EIVS GGKTVWG+PA V NVVGG TFDVVLDNNGK+LD VRPV DWA
Sbjct:   120 SEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPVVDWA 179

Query:   175 KSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMI 234
             KSSGVKQFLFISSAGIYK  ++PPHVEGD VK DAGHV VEKY++E F NWASFRPQYMI
Sbjct:   180 KSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRPQYMI 239

Query:   235 GSGNNKDCEEWFFDR 249
             GSGNNKDCEEWFFDR
Sbjct:   240 GSGNNKDCEEWFFDR 254

GO:0003729 "mRNA binding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

TAIR|locus:2203028 CRB "chloroplast RNA binding" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 63/188 (33%), Positives = 95/188 (50%)

Query:    70 SAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI 129
             SA+ +KK+LI+    GG   IG +L++ L+  GH+VT+ T G   S   K+ P     + 
Sbjct:    49 SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRG--KSPIAKQLPGESDQDF 102

Query:   130 VSAGGKTVW--GDPAEVGNVVGGVT---FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                  K +   GD  +   V   ++   FDVV D NG+  + V P+ +      ++Q+++
Sbjct:   103 ADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQYIY 160

Query:   185 ISSAGIYKPADEPPHVEGDVVKPDAGH---VQVEKYISENFSNWASFRPQYMIGSGNNKD 241
              SSAG+Y  +D  PH E D V P + H   ++ E  +     NW S RP Y+ G  N   
Sbjct:   161 CSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNP 220

Query:   242 CEEWFFDR 249
              EEWFF R
Sbjct:   221 VEEWFFHR 228


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.132   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       202   0.00090  111 3  11 23  0.40    33
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  180 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.07u 0.15s 18.22t   Elapsed:  00:00:00
  Total cpu time:  18.07u 0.15s 18.22t   Elapsed:  00:00:00
  Start:  Fri May 10 16:20:29 2013   End:  Fri May 10 16:20:29 2013

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0003723 "RNA binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0042631 "cellular response to water deprivation" evidence=IEP

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0016020 "membrane" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP;IMP

GO:0009658 "chloroplast organization" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005840 "ribosome" evidence=IDA

GO:0006364 "rRNA processing" evidence=IGI;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0032544 "plastid translation" evidence=IMP

GO:0045727 "positive regulation of translation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA;IMP

GO:0005996 "monosaccharide metabolic process" evidence=IMP

GO:0010297 "heteropolysaccharide binding" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042793 "transcription from plastid promoter" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LYA9	CP41A_ARATH	No assigned EC number	0.8153	0.776	0.4778	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_II0251	mRNA-binding protein (404 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00041064	hypothetical protein (230 aa)			•						0.429

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	250
PLN00016	378	PLN00016, PLN00016, RNA-binding protein; Provision	1e-124
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-25
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	6e-10
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-10
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	7e-10
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-09
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-06
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	1e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	3e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-04
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-04
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	0.003
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	0.003

>gnl|CDD|215029 PLN00016, PLN00016, RNA-binding protein; Provisional

 Score =  358 bits (921), Expect = e-124
 Identities = 145/227 (63%), Positives = 166/227 (73%)

Query: 23  ASLPPSLRLSFSSYSHLSSLVSISPSSFLACPASSRRSSVSAFTVKASAAEKKKVLIVNT 82
           A     LR S +S    SS  S    +  A    SRR+S  A    A+A EKKKVLIVNT
Sbjct: 1   ALSSSRLRSSSASSLLSSSSSSSISPALAARAQGSRRASQVAGAAAAAAVEKKKVLIVNT 60

Query: 83  NSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA 142
           NSGGHA IGFYLAKEL+ +GHEVT+ T G E S KMKK PF+RF+E+ SAG KTVWGDPA
Sbjct: 61  NSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPA 120

Query: 143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG 202
           +V + V G  FDVV DNNGK+LD V PVADWAKS G+KQFLF SSAG+YK +DEPPHVEG
Sbjct: 121 DVKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG 180

Query: 203 DVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDR 249
           D VKP AGH++VE Y+ +   NW SFRPQY+ G GNNKDCEEWFFDR
Sbjct: 181 DAVKPKAGHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDR 227

Length = 378

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score =  100 bits (251), Expect = 1e-25
 Identities = 55/190 (28%), Positives = 78/190 (41%), Gaps = 33/190 (17%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            K+LI+    GG   IG  L +ELL +GH+VT+   G       +  P       +  G 
Sbjct: 1   MKILII----GGTRFIGKALVEELLAAGHDVTVFNRG-------RTKP------DLPEGV 43

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + + GD      +  ++GG  FDVV+D        V    D  K   VKQ++FISSA +Y
Sbjct: 44  EHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQVERALDAFKGR-VKQYIFISSASVY 102

Query: 192 KPADEP-----PHVEGDVVKPD------AGHVQVEKYISENFS-NWASFRPQYMIGSGNN 239
                      P  E D V          G    E  + E  +  +   RP Y+ G G+ 
Sbjct: 103 LKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIVRPPYIYGPGDY 162

Query: 240 KDCEEWFFDR 249
                +FFDR
Sbjct: 163 TGRLAYFFDR 172

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 43/181 (23%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           +L+     GG   IG +L + LL  G+EV ++                R   + +   + 
Sbjct: 1   ILVT----GGTGFIGSHLVRRLLQEGYEVIVLGRR------------RRSESLNTGRIRF 44

Query: 137 VWGD---PAEVGNVVGGVTFDVVL--------DNNGK--------NLDAVRPVADWAKSS 177
             GD   P  +  ++  V  D V+          + +        N+     + + A+ +
Sbjct: 45  HEGDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRA 104

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GVK+F+F SS+ +Y    +PP  E   + P         A    VE Y           R
Sbjct: 105 GVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 230 P 230
            
Sbjct: 165 L 165

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 58.0 bits (140), Expect = 7e-10
 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 23/191 (12%)

Query: 75  KKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
            ++L+      G A  IG +L + LL +GH+V  +    +  D +         ++    
Sbjct: 1   MRILVT-----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRD 55

Query: 134 G--KTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSSGVKQFLFIS 186
              +   G P  V ++    +      ++       N+D    + + A+++GVK+F+F S
Sbjct: 56  LVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFAS 115

Query: 187 SAGIYKPADEPPHVEGDVVKPD------AGHVQVEKYISENFS----NWASFRPQYMIGS 236
           S  +      P  ++ D+  P          +  E+ +              RP  + G 
Sbjct: 116 SVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGP 175

Query: 237 GNNKDCEEWFF 247
           G+  D      
Sbjct: 176 GDKPDLSSGVV 186

Length = 314

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 56.2 bits (136), Expect = 7e-10
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 41/177 (23%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV----WGD 140
           G     G  L KELL  GH+VT                 +R      A G T       D
Sbjct: 5   GATGKTGRRLVKELLARGHQVT---------------ALSRNPSKAPAPGVTPVQKDLFD 49

Query: 141 PAEVGNVVGGVTFDVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            A++   + G   D V+D  G    + D V+ + D A  +GV++ + +S+AG+Y    + 
Sbjct: 50  LADLAEALAG--VDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLY---RDE 104

Query: 198 PHVEGDVVKPDAGHV-----QVEKYISENFSNWASFRP---------QYMIGSGNNK 240
           P        P            E+ +  +  +W   RP          Y IG+  + 
Sbjct: 105 PGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGTEGDP 161

Length = 182

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 42/165 (25%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTV---WGD 140
           GG   IG +L + LL  GHEV +                +R + +V  A    V   W +
Sbjct: 5   GGAGFIGSHLVRRLLERGHEVVV---------------IDRLDVVVHLAALVGVPASWDN 49

Query: 141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV 200
           P E         F+        N+     + + A+ +GVK+F++ SSA +Y   +  P  
Sbjct: 50  PDE--------DFET-------NVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEE 94

Query: 201 EGDVVKPD----AGHVQVEKYISENFSNW----ASFRPQYMIGSG 237
           E    +P        +  E  +     ++       R   + G G
Sbjct: 95  EETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPG 139

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 25/164 (15%)

Query: 77  VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT 136
           +LI    + G   IG  LA+ELL  GHEVT++     N+ ++ K       E V+     
Sbjct: 1   ILI--LGATGF--IGRALARELLEQGHEVTLL---VRNTKRLSKE----DQEPVAVVEGD 49

Query: 137 VWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
           +  D   + + V GV  DVV+          D    +++  R V + AK +GVK F+FIS
Sbjct: 50  L-RDLDSLSDAVQGV--DVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFIS 106

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           S G Y    E            A   + E  + E    +   RP
Sbjct: 107 SLGAYGDLHEETEPSPS-SPYLAVKAKTEAVLREASLPYTIVRP 149

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 32/166 (19%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN 146
            G  + +E L  GHEVT +     +  K+                K V GD     +V  
Sbjct: 11  TGSAIVREALARGHEVTALVR---DPAKLP---------AEHEKLKVVQGDVLDLEDVKE 58

Query: 147 VVGGVTFDVVLD--NNGKNL-------DAVRPVADWAKSSGVKQFLFISSAGIYKPADEP 197
            + G   D V+       +L       +  R +    K++GVK+ + +  AG      + 
Sbjct: 59  ALEG--QDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKV 116

Query: 198 PHVEGDVVKPD------AGHVQVEKYISENFSNWASFRPQYMIGSG 237
             V   ++ P         H ++ K + E+  +W + RP  +   G
Sbjct: 117 TLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALFDGG 162

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 24/149 (16%)

Query: 90  IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG 149
           +G  + + LL     V  + V +      K   F   + +    G   + DP  +     
Sbjct: 10  LGTAVVELLLAKVASVVAL-VRNPE----KAKAF-AADGVEVRQGD--YDDPETLERAFE 61

Query: 150 GVTFDVVL----DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV 205
           GV  D +L     +    +   +   D AK +GVK  +++S++G     D P  +  D  
Sbjct: 62  GV--DRLLLISPSDLEDRIQQHKNFIDAAKQAGVKHIVYLSASGA--DEDSPFLLARD-- 115

Query: 206 KPDAGHVQVEKYISENFSNWASFRP-QYM 233
                H   EKY+  +   +   RP  +M
Sbjct: 116 -----HGATEKYLEASGIPYTILRPGWFM 139

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 51/177 (28%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           KVL+V    G    +G ++ +ELL  G++V  +                R      A   
Sbjct: 1   KVLVV----GATGKVGRHVVRELLDRGYQVRALV---------------RDPS--QAEKL 39

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAV----------------------RPVADW 173
              G  AEV  VVG +T    L    + +DAV                        + D 
Sbjct: 40  EAAG--AEV--VVGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDA 95

Query: 174 AKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           AK +GVK+F+ +SS G  KP   P    G  +  DA     E Y+  +  ++   RP
Sbjct: 96  AKKAGVKRFVLVSSIGADKP-SHPLEALGPYL--DAKRK-AEDYLRASGLDYTIVRP 148

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 16/131 (12%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT----VGDENSDKMKKPPFNRFNEIVS 131
           KVL+    +G +  IG  L  +LL  G EV I        + +    + P  + F ++  
Sbjct: 1   KVLV----TGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLF- 55

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS---- 187
             G       A   +V+     D + D    N +  R +A  A   GVK+F+F+SS    
Sbjct: 56  -LGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVKVN 114

Query: 188 --AGIYKPADE 196
               +  P DE
Sbjct: 115 GEGTVGAPFDE 125

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 7e-04
 Identities = 46/185 (24%), Positives = 72/185 (38%), Gaps = 55/185 (29%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG- 134
            VL+  ++ G    IGF +A+ELL  G  V I +  +EN +K  K       E+   G  
Sbjct: 2   NVLVTASSRG----IGFNVARELLKKGARVVISSRNEENLEKALK-------ELKEYGEV 50

Query: 135 ---KTVWGDPAEVGNVV-------GGVTFDVVLDNNGK--------------------NL 164
              K    D  ++ N+V       GG+  D ++ N G                      L
Sbjct: 51  YAVKADLSDKDDLKNLVKEAWELLGGI--DALVWNAGNVRCEPCMLHEAGYSDWLEAALL 108

Query: 165 DAVRP-------VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY 217
             V P       +  W +       +++SS  + +P   PP V  DV +  AG VQ+ K 
Sbjct: 109 HLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM--PPLVLADVTR--AGLVQLAKG 164

Query: 218 ISENF 222
           +S  +
Sbjct: 165 VSRTY 169

Length = 259

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 23/126 (18%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---- 140
           GG   +G +L K LL +G +V ++   +   +  ++          +   + + GD    
Sbjct: 5   GGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLE---ADRVRVLEGDLTQP 61

Query: 141 -----PAEVGNVVGGVT----FDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLF 184
                 A    + G V          D           N+D    V + A    +++F +
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFHY 121

Query: 185 ISSAGI 190
           +S+A +
Sbjct: 122 VSTAYV 127

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 76  KVLIVNTN----SGGHAVIGFYLAKELLGSGHEVTIMT 109
           K+LI++       GG A     LA+EL+  GHEVT++T
Sbjct: 1   KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVIT 38

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 31/179 (17%), Positives = 55/179 (30%), Gaps = 55/179 (30%)

Query: 85  GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-------RFNEIVSAGGKTV 137
           G    IG Y+   L   G +V +    +    +      +        F+          
Sbjct: 7   GATGFIGRYVVNRLAKRGSQVIVPYRCEAY-ARRLLVMGDLGQVLFVEFDLR-------- 57

Query: 138 WGDPAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFI 185
             D   +   + G   DVV++  G+            +++    +A  AK +GV++ + I
Sbjct: 58  --DDESIRKALEGS--DVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMIGSG 237
           S+ G             D   P         G    E+ + E F      RP  + G  
Sbjct: 114 SALGA------------DANSPSKYLRSKAEG----EEAVREAFPEATIVRPSVVFGRE 156

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
PLN00016	378	RNA-binding protein; Provisional	99.98
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.93
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.93
PLN02572	442	UDP-sulfoquinovose synthase	99.92
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.89
PLN02427	386	UDP-apiose/xylose synthase	99.89
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.89
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.88
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.88
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.87
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.87
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.87
PLN00198	338	anthocyanidin reductase; Provisional	99.86
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.86
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.86
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.86
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.86
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.86
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.85
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.85
PLN02650	351	dihydroflavonol-4-reductase	99.85
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.85
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.84
PLN02206	442	UDP-glucuronate decarboxylase	99.84
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.84
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.84
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.84
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
PLN02240	352	UDP-glucose 4-epimerase	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.83
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.83
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.83
CHL00194	317	ycf39 Ycf39; Provisional	99.82
PLN02686	367	cinnamoyl-CoA reductase	99.82
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.81
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.81
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.8
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.8
PLN02583	297	cinnamoyl-CoA reductase	99.79
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.79
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.79
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.79
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.79
PLN03209	576	translocon at the inner envelope of chloroplast su	99.77
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.76
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.76
PRK07201	657	short chain dehydrogenase; Provisional	99.75
PLN02996	491	fatty acyl-CoA reductase	99.75
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.74
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.74
PLN02778	298	3,5-epimerase/4-reductase	99.73
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.73
PRK05865	854	hypothetical protein; Provisional	99.71
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.69
PRK06482	276	short chain dehydrogenase; Provisional	99.69
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.68
PRK12320	699	hypothetical protein; Provisional	99.67
PRK05993	277	short chain dehydrogenase; Provisional	99.66
PRK06180	277	short chain dehydrogenase; Provisional	99.66
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.66
PRK06179	270	short chain dehydrogenase; Provisional	99.65
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.64
PRK06182	273	short chain dehydrogenase; Validated	99.64
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.64
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.63
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.63
PLN02503	605	fatty acyl-CoA reductase 2	99.63
PLN02260	668	probable rhamnose biosynthetic enzyme	99.62
PRK08263	275	short chain dehydrogenase; Provisional	99.62
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.61
PRK12828	239	short chain dehydrogenase; Provisional	99.6
PRK09291	257	short chain dehydrogenase; Provisional	99.6
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.59
PRK06196	315	oxidoreductase; Provisional	99.59
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.59
PRK07024	257	short chain dehydrogenase; Provisional	99.59
PRK09186	256	flagellin modification protein A; Provisional	99.59
PRK10538	248	malonic semialdehyde reductase; Provisional	99.58
PRK06138	252	short chain dehydrogenase; Provisional	99.58
PRK07890	258	short chain dehydrogenase; Provisional	99.58
PRK12827	249	short chain dehydrogenase; Provisional	99.58
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK07454	241	short chain dehydrogenase; Provisional	99.57
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.57
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK06914	280	short chain dehydrogenase; Provisional	99.57
PRK08267	260	short chain dehydrogenase; Provisional	99.57
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.57
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.57
PRK12829	264	short chain dehydrogenase; Provisional	99.56
PRK08264	238	short chain dehydrogenase; Validated	99.56
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.56
PRK05717	255	oxidoreductase; Validated	99.56
PRK05693	274	short chain dehydrogenase; Provisional	99.55
PRK06194	287	hypothetical protein; Provisional	99.55
PRK12746	254	short chain dehydrogenase; Provisional	99.55
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK05876	275	short chain dehydrogenase; Provisional	99.55
PRK07067	257	sorbitol dehydrogenase; Provisional	99.55
PRK05875	276	short chain dehydrogenase; Provisional	99.54
PRK06101	240	short chain dehydrogenase; Provisional	99.54
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.54
PRK07775	274	short chain dehydrogenase; Provisional	99.54
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.54
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK09135	249	pteridine reductase; Provisional	99.54
PRK07577	234	short chain dehydrogenase; Provisional	99.54
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.53
PRK07774	250	short chain dehydrogenase; Provisional	99.53
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.53
PRK06398	258	aldose dehydrogenase; Validated	99.53
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.53
PRK08643	256	acetoin reductase; Validated	99.53
PRK07102	243	short chain dehydrogenase; Provisional	99.53
PRK07074	257	short chain dehydrogenase; Provisional	99.53
PRK06128	300	oxidoreductase; Provisional	99.52
PRK06523	260	short chain dehydrogenase; Provisional	99.52
PRK07060	245	short chain dehydrogenase; Provisional	99.52
PRK07109	334	short chain dehydrogenase; Provisional	99.52
PRK06500	249	short chain dehydrogenase; Provisional	99.52
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.52
PRK05650	270	short chain dehydrogenase; Provisional	99.52
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.52
PRK07825	273	short chain dehydrogenase; Provisional	99.52
PRK06197	306	short chain dehydrogenase; Provisional	99.52
PRK08251	248	short chain dehydrogenase; Provisional	99.52
PRK08265	261	short chain dehydrogenase; Provisional	99.51
PRK07326	237	short chain dehydrogenase; Provisional	99.51
PRK08339	263	short chain dehydrogenase; Provisional	99.51
PRK08628	258	short chain dehydrogenase; Provisional	99.51
PRK08017	256	oxidoreductase; Provisional	99.51
PRK07023	243	short chain dehydrogenase; Provisional	99.51
PRK07069	251	short chain dehydrogenase; Validated	99.51
PRK12939	250	short chain dehydrogenase; Provisional	99.51
PRK05866	293	short chain dehydrogenase; Provisional	99.51
PRK07856	252	short chain dehydrogenase; Provisional	99.51
PRK06949	258	short chain dehydrogenase; Provisional	99.5
PRK07904	253	short chain dehydrogenase; Provisional	99.5
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.5
PRK07806	248	short chain dehydrogenase; Provisional	99.5
PRK09242	257	tropinone reductase; Provisional	99.5
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.5
PRK07814	263	short chain dehydrogenase; Provisional	99.5
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.49
PRK06841	255	short chain dehydrogenase; Provisional	99.49
PRK06181	263	short chain dehydrogenase; Provisional	99.49
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.49
PRK07062	265	short chain dehydrogenase; Provisional	99.49
PRK06057	255	short chain dehydrogenase; Provisional	99.49
PRK07063	260	short chain dehydrogenase; Provisional	99.49
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.49
PRK08219	227	short chain dehydrogenase; Provisional	99.49
PRK07478	254	short chain dehydrogenase; Provisional	99.48
PRK06701	290	short chain dehydrogenase; Provisional	99.48
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.48
PRK06172	253	short chain dehydrogenase; Provisional	99.48
PRK12743	256	oxidoreductase; Provisional	99.48
PRK07985	294	oxidoreductase; Provisional	99.47
PLN02253	280	xanthoxin dehydrogenase	99.47
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.47
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.47
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.47
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.47
PRK08589	272	short chain dehydrogenase; Validated	99.47
PRK07035	252	short chain dehydrogenase; Provisional	99.46
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.46
PRK12747	252	short chain dehydrogenase; Provisional	99.46
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.45
COG2910	211	Putative NADH-flavin reductase [General function p	99.45
PRK06139	330	short chain dehydrogenase; Provisional	99.45
PLN02780	320	ketoreductase/ oxidoreductase	99.45
PRK08226	263	short chain dehydrogenase; Provisional	99.44
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.44
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.44
PRK06123	248	short chain dehydrogenase; Provisional	99.44
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.44
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.44
PRK07201	657	short chain dehydrogenase; Provisional	99.44
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.44
PRK06483	236	dihydromonapterin reductase; Provisional	99.43
PRK06114	254	short chain dehydrogenase; Provisional	99.43
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.43
PRK05872	296	short chain dehydrogenase; Provisional	99.43
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.43
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.43
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.43
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.43
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.43
PRK07576	264	short chain dehydrogenase; Provisional	99.42
PRK07677	252	short chain dehydrogenase; Provisional	99.42
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.42
PRK08703	239	short chain dehydrogenase; Provisional	99.42
PRK12742	237	oxidoreductase; Provisional	99.42
PRK07832	272	short chain dehydrogenase; Provisional	99.42
PRK12937	245	short chain dehydrogenase; Provisional	99.42
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.41
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.41
PRK05855	582	short chain dehydrogenase; Validated	99.41
PRK05854	313	short chain dehydrogenase; Provisional	99.41
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.4
PRK09134	258	short chain dehydrogenase; Provisional	99.4
PRK12744	257	short chain dehydrogenase; Provisional	99.4
PRK06198	260	short chain dehydrogenase; Provisional	99.4
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK09072	263	short chain dehydrogenase; Provisional	99.39
PRK06484	520	short chain dehydrogenase; Validated	99.39
PRK05867	253	short chain dehydrogenase; Provisional	99.39
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.39
PRK08324	681	short chain dehydrogenase; Validated	99.38
PRK08177	225	short chain dehydrogenase; Provisional	99.38
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.38
PRK06953	222	short chain dehydrogenase; Provisional	99.38
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.37
PRK07831	262	short chain dehydrogenase; Provisional	99.37
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.37
PRK08278	273	short chain dehydrogenase; Provisional	99.37
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.37
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.37
PRK06924	251	short chain dehydrogenase; Provisional	99.37
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.36
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.35
PRK07041	230	short chain dehydrogenase; Provisional	99.35
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.34
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.32
PRK07578	199	short chain dehydrogenase; Provisional	99.31
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.31
PRK06125	259	short chain dehydrogenase; Provisional	99.31
PRK06940	275	short chain dehydrogenase; Provisional	99.3
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.3
PRK05884	223	short chain dehydrogenase; Provisional	99.28
PRK06484	520	short chain dehydrogenase; Validated	99.27
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.27
PRK05599	246	hypothetical protein; Provisional	99.26
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.26
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.26
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.25
PRK12367	245	short chain dehydrogenase; Provisional	99.25
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.25
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.25
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.25
KOG2774	366	consensus NAD dependent epimerase [General functio	99.24
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.24
PRK07791	286	short chain dehydrogenase; Provisional	99.23
PRK08862	227	short chain dehydrogenase; Provisional	99.22
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.21
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.2
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.19
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.18
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.17
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.13
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.13
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.13
PRK08303	305	short chain dehydrogenase; Provisional	99.13
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.12
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.11
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.1
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.09
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.09
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.09
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.08
KOG0725	270	consensus Reductases with broad range of substrate	99.08
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.07
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.06
PLN00015	308	protochlorophyllide reductase	99.05
KOG1208	314	consensus Dehydrogenases with different specificit	99.02
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.99
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.97
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.95
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.95
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.92
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.87
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.83
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.82
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.82
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.81
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.78
COG1028	251	FabG Dehydrogenases with different specificities (	98.76
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.74
PTZ00325	321	malate dehydrogenase; Provisional	98.67
PRK08309	177	short chain dehydrogenase; Provisional	98.65
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.59
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.58
PRK06720	169	hypothetical protein; Provisional	98.52
PRK09620	229	hypothetical protein; Provisional	98.42
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.31
PLN00106	323	malate dehydrogenase	98.26
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.23
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.19
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.19
PRK05086	312	malate dehydrogenase; Provisional	98.11
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.03
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.01
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.89
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.84
PRK14982	340	acyl-ACP reductase; Provisional	97.82
COG3268	382	Uncharacterized conserved protein [Function unknow	97.79
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.78
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.78
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.75
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.75
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.74
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.7
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	97.7
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.58
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.58
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.55
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.53
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.53
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.51
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.5
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.49
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.45
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.45
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.43
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.42
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.41
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.39
PRK08328	231	hypothetical protein; Provisional	97.38
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.38
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.37
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.36
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.32
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.28
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.28
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.26
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.25
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.24
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.21
PRK09496	453	trkA potassium transporter peripheral membrane com	97.2
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.2
PRK08223	287	hypothetical protein; Validated	97.19
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.18
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.12
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.12
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.12
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.11
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.04
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.04
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.03
PRK09496	453	trkA potassium transporter peripheral membrane com	97.03
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	97.03
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.02
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.02
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.0
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.97
PRK04148	134	hypothetical protein; Provisional	96.95
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.91
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.9
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.9
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.87
PRK10669	558	putative cation:proton antiport protein; Provision	96.86
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.85
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.83
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.83
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.82
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.82
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.81
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.81
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.8
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.79
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	96.78
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.78
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.76
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.76
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.73
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.72
PLN02383	344	aspartate semialdehyde dehydrogenase	96.71
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.69
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.69
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.69
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.65
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.64
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.63
PRK07411	390	hypothetical protein; Validated	96.61
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.59
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.57
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.56
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.54
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.53
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.52
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.52
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.51
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.5
PRK05442	326	malate dehydrogenase; Provisional	96.5
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.49
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.48
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.47
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.47
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.47
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.47
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	96.44
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.43
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.43
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.42
PTZ00117	319	malate dehydrogenase; Provisional	96.41
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.39
PRK14851	679	hypothetical protein; Provisional	96.37
PRK14852	989	hypothetical protein; Provisional	96.36
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.35
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.32
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.31
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.3
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.3
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.29
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.28
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.27
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.26
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.26
PRK06223	307	malate dehydrogenase; Reviewed	96.24
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.24
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.24
PLN02775	286	Probable dihydrodipicolinate reductase	96.23
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.22
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.21
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.21
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.21
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.2
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.19
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.19
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.18
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.18
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.13
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.12
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.12
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.11
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	96.09
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.09
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.09
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.09
PRK07877	722	hypothetical protein; Provisional	96.09
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.08
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.05
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.05
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.03
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.03
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.03
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.02
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.01
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.01
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	96.0
PRK08655	437	prephenate dehydrogenase; Provisional	95.98
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.98
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.94
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.94
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.94
PLN00203	519	glutamyl-tRNA reductase	95.88
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.87
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.86
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.84
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	95.84
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.83
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.83
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	95.83
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.8
PLN02494	477	adenosylhomocysteinase	95.79
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.78
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.77
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.77
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.76
PRK08591	451	acetyl-CoA carboxylase biotin carboxylase subunit;	95.76
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.76
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.76
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.75
PRK05678	291	succinyl-CoA synthetase subunit alpha; Validated	95.75
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.74
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	95.74
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.73
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.73
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	95.72
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.72
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.71
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.69
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	95.65
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.64
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.62
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.62
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.61
PRK13886	241	conjugal transfer protein TraL; Provisional	95.6
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	95.6
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.58
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.58
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	95.54
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.53
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.53

>PLN00016 RNA-binding protein; Provisional

Probab=99.98  E-value=1e-31  Score=243.18  Aligned_cols=197  Identities=69%  Similarity=1.106  Sum_probs=159.2

Q ss_pred             cCccccccCcccccccccccccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc
Q 025587           52 ACPASSRRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS  131 (250)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~  131 (250)
                      ....+.|+.............++++|||||||||||||||++|+++|+++||+|++++|+.+....+...++..+.++..
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~  109 (378)
T PLN00016         30 ARAQGSRRASQVAGAAAAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS  109 (378)
T ss_pred             hccccccccccchhhhhhcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh
Confidence            33444444444333344556677899999999999999999999999999999999999876544444333333444444


Q ss_pred             CCceEEeCCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          132 AGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       132 ~~v~~v~~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      .+++++++|..++.+++....+|+|||+++.+..++.+++++|++.|+++||++||.++|+.....|+.|.++..+..++
T Consensus       110 ~~v~~v~~D~~d~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK  189 (378)
T PLN00016        110 AGVKTVWGDPADVKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGH  189 (378)
T ss_pred             cCceEEEecHHHHHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchH
Confidence            57899999988888888656699999999999999999999999999999999999999998777788888887776678


Q ss_pred             hHHHHHHHHhCCcEEEEecCeeecCCCCCCcccccee
Q 025587          212 VQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFD  248 (250)
Q Consensus       212 y~~~k~~~e~~~~~~ilRp~~i~G~~~~~~~~~~~~~  248 (250)
                      ..+|+++.+.+++|+++||+++||++....+..||++
T Consensus       190 ~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~  226 (378)
T PLN00016        190 LEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFD  226 (378)
T ss_pred             HHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHH
Confidence            8899999999999999999999999876666566543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.93  E-value=4.6e-25  Score=188.37  Aligned_cols=155  Identities=24%  Similarity=0.274  Sum_probs=130.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~  151 (250)
                      |+||||    ||.||||++.+.+|++.||+|+++++-........          ....++++.+   |.+.+.++|+..
T Consensus         1 ~~iLVt----GGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v----------~~~~~~f~~gDi~D~~~L~~vf~~~   66 (329)
T COG1087           1 MKVLVT----GGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIAL----------LKLQFKFYEGDLLDRALLTAVFEEN   66 (329)
T ss_pred             CeEEEe----cCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHh----------hhccCceEEeccccHHHHHHHHHhc
Confidence            589999    99999999999999999999999998653332110          1001345555   588999999998


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                      ++|+|||+||                .|+.+|.+++++|+++|+++|||-||+.+||.+...|+.|+.+..|. ++|+.+
T Consensus        67 ~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~-NPYG~s  145 (329)
T COG1087          67 KIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI-NPYGRS  145 (329)
T ss_pred             CCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC-CcchhH
Confidence            9999999999                48999999999999999999999999999999999999999999986 889988


Q ss_pred             HHHHHh---------CCcEEEEecCeeecCCCCCCccc
Q 025587          216 KYISEN---------FSNWASFRPQYMIGSGNNKDCEE  244 (250)
Q Consensus       216 k~~~e~---------~~~~~ilRp~~i~G~~~~~~~~~  244 (250)
                      |++.|.         +++++++|..++.|-...-..-+
T Consensus       146 Klm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe  183 (329)
T COG1087         146 KLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQ  183 (329)
T ss_pred             HHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCC
Confidence            887776         58999999999999876544333

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.93  E-value=1.1e-24  Score=195.27  Aligned_cols=160  Identities=22%  Similarity=0.205  Sum_probs=122.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+||||++|+++|+++|++|++++|.......................+.++.+|   .+.+.+++++
T Consensus        15 ~~~vlVt----GatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~   90 (348)
T PRK15181         15 PKRWLIT----GVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN   90 (348)
T ss_pred             CCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence            4799999    99999999999999999999999998653221100000000000011235566666   6678888876


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                        +|+|||+|+                .|+.++.+++++|++.++++|||+||.++|+...+.+..|.++..|. +.|+.
T Consensus        91 --~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y~~  167 (348)
T PRK15181         91 --VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL-SPYAV  167 (348)
T ss_pred             --CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC-ChhhH
Confidence              899999997                36789999999999999999999999999997666677787776665 78998


Q ss_pred             HHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          215 EKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       215 ~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +|...|.         +++++++||+++|||++++
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~  202 (348)
T PRK15181        168 TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNP  202 (348)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCC
Confidence            8866654         6999999999999998754

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.92  E-value=4.3e-24  Score=197.11  Aligned_cols=164  Identities=18%  Similarity=0.179  Sum_probs=117.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-c---cCCCC-C----CCccc---chhcCCceEEe
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-D---KMKKP-P----FNRFN---EIVSAGGKTVW  138 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~---~~~~~-~----~~~~~---~~~~~~v~~v~  138 (250)
                      ..++|+||||    ||+||||++|+++|+++|++|++++|..... +   ..... +    ...+.   .....+++++.
T Consensus        44 ~~~~k~VLVT----GatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~  119 (442)
T PLN02572         44 SSKKKKVMVI----GGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV  119 (442)
T ss_pred             cccCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence            3456899999    9999999999999999999999998532110 0   00000 0    00000   01123466666


Q ss_pred             CC---HHHHHhhhcCCcccEEEeCCC-------------------cCHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCC
Q 025587          139 GD---PAEVGNVVGGVTFDVVLDNNG-------------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPAD  195 (250)
Q Consensus       139 ~D---~~~l~~~l~~~~~d~Vi~~ag-------------------~~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~  195 (250)
                      +|   .+.+.+++++.++|+|||+|+                   .|+.++.+++++|++.+++ +||++||..+||...
T Consensus       120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~  199 (442)
T PLN02572        120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN  199 (442)
T ss_pred             CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence            66   778888888767999999995                   2677899999999998885 999999999999643


Q ss_pred             CCCccC-----------CC---CCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          196 EPPHVE-----------GD---VVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       196 ~~~~~e-----------~~---~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      . +++|           ++   +..|. +.|+.+|...|.         +++++++||+++|||+++.
T Consensus       200 ~-~~~E~~i~~~~~~~e~~~~~~~~P~-s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~  265 (442)
T PLN02572        200 I-DIEEGYITITHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDE  265 (442)
T ss_pred             C-CCcccccccccccccccccCCCCCC-CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcc
Confidence            1 2222           21   33443 679988876554         6999999999999998653

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.89  E-value=2.3e-22  Score=176.68  Aligned_cols=139  Identities=19%  Similarity=0.301  Sum_probs=116.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |+||||    ||+||||++|+++|+++| +|++++|....                   +..+..|.+.+.+++++.++|
T Consensus         1 m~iLVt----G~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-------------------~~~Dl~d~~~~~~~~~~~~~D   56 (299)
T PRK09987          1 MNILLF----GKTGQVGWELQRALAPLG-NLIALDVHSTD-------------------YCGDFSNPEGVAETVRKIRPD   56 (299)
T ss_pred             CeEEEE----CCCCHHHHHHHHHhhccC-CEEEecccccc-------------------ccCCCCCHHHHHHHHHhcCCC
Confidence            589999    999999999999999999 79988876421                   111233788899999876799


Q ss_pred             EEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||+|+                .|+.++.+++++|++.++ +||++||..||+.....|++|+++..|. +.|+..|..
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~-~~Yg~sK~~  134 (299)
T PRK09987         57 VIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPL-NVYGETKLA  134 (299)
T ss_pred             EEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCC-CHHHHHHHH
Confidence            9999998                357789999999999886 7999999999998777789999988876 789988877


Q ss_pred             HHh-----CCcEEEEecCeeecCCCC
Q 025587          219 SEN-----FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       219 ~e~-----~~~~~ilRp~~i~G~~~~  239 (250)
                      .|.     ..+++++||+++|||+.+
T Consensus       135 ~E~~~~~~~~~~~ilR~~~vyGp~~~  160 (299)
T PRK09987        135 GEKALQEHCAKHLIFRTSWVYAGKGN  160 (299)
T ss_pred             HHHHHHHhCCCEEEEecceecCCCCC
Confidence            776     357899999999999753

>PLN02427 UDP-apiose/xylose synthase

Probab=99.89  E-value=4.8e-22  Score=180.39  Aligned_cols=160  Identities=14%  Similarity=0.192  Sum_probs=115.8

Q ss_pred             cccccCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHH
Q 025587           69 ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (250)
Q Consensus        69 ~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l  144 (250)
                      ..+.+.|+||||    ||+||||++|+++|+++ |++|++++|..+....+......    ....+++++.+|   .+.+
T Consensus         9 ~~~~~~~~VlVT----GgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~----~~~~~~~~~~~Dl~d~~~l   80 (386)
T PLN02427          9 GKPIKPLTICMI----GAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV----PWSGRIQFHRINIKHDSRL   80 (386)
T ss_pred             CCcccCcEEEEE----CCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc----cCCCCeEEEEcCCCChHHH
Confidence            334556899999    99999999999999998 59999999876544332111000    011346677666   6778


Q ss_pred             HhhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC--
Q 025587          145 GNVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK--  206 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~--  206 (250)
                      .+++++  +|+|||+|+                .|+.++.+++++|++.+ ++||++||..+||.....+.+|+.+..  
T Consensus        81 ~~~~~~--~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~  157 (386)
T PLN02427         81 EGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQD  157 (386)
T ss_pred             HHHhhc--CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence            888876  799999997                24667899999999877 899999999999975333333332211  


Q ss_pred             -------------------CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          207 -------------------PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 -------------------~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                                         ...+.|+.+|.+.|.         +++++++||++||||+..
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~  218 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD  218 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCC
Confidence                               012468877765543         689999999999999753

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.89  E-value=2.8e-22  Score=174.65  Aligned_cols=148  Identities=24%  Similarity=0.387  Sum_probs=112.7

Q ss_pred             EEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC---HHHHHhhhcCC
Q 025587           78 LIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D---~~~l~~~l~~~  151 (250)
                      |||    ||+||+|++|+++|+++|  ++|+++++........         .....+.. ++++|   ++++.+++++ 
T Consensus         1 LVT----GgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~---------~~~~~~~~~~~~~Di~d~~~l~~a~~g-   66 (280)
T PF01073_consen    1 LVT----GGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK---------DLQKSGVKEYIQGDITDPESLEEALEG-   66 (280)
T ss_pred             CEE----cCCcHHHHHHHHHHHHCCCceEEEEcccccccccch---------hhhcccceeEEEeccccHHHHHHHhcC-
Confidence            699    999999999999999999  8999999876432210         01111222 55555   9999999998 


Q ss_pred             cccEEEeCCC---------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC-CCCCc---cCCCCCCC-CCCh
Q 025587          152 TFDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPH---VEGDVVKP-DAGH  211 (250)
Q Consensus       152 ~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~-~~~~~---~e~~~~~~-~~~~  211 (250)
                       +|+|||+|+               +|+.||++++++|++.++++|||+||.+++++. ...++   +|..+..+ ....
T Consensus        67 -~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~  145 (280)
T PF01073_consen   67 -VDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDP  145 (280)
T ss_pred             -CceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCc
Confidence             799999987               479999999999999999999999999998872 12232   44443321 2356


Q ss_pred             hHHHHHHHHh------C--------CcEEEEecCeeecCCCCC
Q 025587          212 VQVEKYISEN------F--------SNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       212 y~~~k~~~e~------~--------~~~~ilRp~~i~G~~~~~  240 (250)
                      |+.+|.++|.      +        ++.++|||..||||++..
T Consensus       146 Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~  188 (280)
T PF01073_consen  146 YAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR  188 (280)
T ss_pred             hHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc
Confidence            8888877775      2        678999999999998654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.88  E-value=2.6e-22  Score=168.98  Aligned_cols=146  Identities=27%  Similarity=0.421  Sum_probs=122.1

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCCcc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGVTF  153 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~~~  153 (250)
                      ||||    ||+||||++++++|+++|++|+.+.|+.......          ....+++++.+   |.+.+.+++++..+
T Consensus         1 IlI~----GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~----------~~~~~~~~~~~dl~~~~~~~~~~~~~~~   66 (236)
T PF01370_consen    1 ILIT----GATGFIGSALVRQLLKKGHEVIVLSRSSNSESFE----------EKKLNVEFVIGDLTDKEQLEKLLEKANI   66 (236)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHH----------HHHTTEEEEESETTSHHHHHHHHHHHTE
T ss_pred             EEEE----ccCCHHHHHHHHHHHHcCCccccccccccccccc----------cccceEEEEEeeccccccccccccccCc
Confidence            7999    9999999999999999999999999987543211          01114555555   48899999988778


Q ss_pred             cEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHH
Q 025587          154 DVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       154 d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                      |+|||+|+.                |+.++.++++++++.++++||++||..+|+.....+++|+++..+. +.|+.+|.
T Consensus        67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~-~~Y~~~K~  145 (236)
T PF01370_consen   67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPL-SPYGASKR  145 (236)
T ss_dssp             SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHS-SHHHHHHH
T ss_pred             eEEEEeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            999999983                5778999999999999999999999999999977789999888665 77998875


Q ss_pred             HHHh---------CCcEEEEecCeeecCC
Q 025587          218 ISEN---------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       218 ~~e~---------~~~~~ilRp~~i~G~~  237 (250)
                      ..|.         +++++++||+.+|||.
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  146 AAEELLRDYAKKYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccccccc
Confidence            5544         6899999999999999

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.88  E-value=7.8e-22  Score=170.07  Aligned_cols=159  Identities=23%  Similarity=0.282  Sum_probs=129.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      .++||||    ||.||||+|.+.+|+++||+|++++.-.... +.+     .+...+.  ...+.++.+|   .+.|+++
T Consensus         2 ~~~VLVt----GgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl-----~r~~~l~~~~~~v~f~~~Dl~D~~~L~kv   72 (343)
T KOG1371|consen    2 GKHVLVT----GGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESL-----KRVRQLLGEGKSVFFVEGDLNDAEALEKL   72 (343)
T ss_pred             CcEEEEe----cCCcceehHHHHHHHhCCCcEEEEecccccchhHH-----HHHHHhcCCCCceEEEEeccCCHHHHHHH
Confidence            5799999    9999999999999999999999999754322 111     1111222  2566666665   9999999


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      ++...+|.|+|+|+                .|+.++.++++.|++++++.+||.||+.+||.+...|++|.++.....++
T Consensus        73 F~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~p  152 (343)
T KOG1371|consen   73 FSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNP  152 (343)
T ss_pred             HhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCc
Confidence            99999999999998                47889999999999999999999999999999999999999998833488


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeec--CCCCCC
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIG--SGNNKD  241 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G--~~~~~~  241 (250)
                      |+.+|...|.         +..++.||..+++|  |....+
T Consensus       153 yg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~g  193 (343)
T KOG1371|consen  153 YGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIG  193 (343)
T ss_pred             chhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccC
Confidence            8888877665         36789999999999  544433

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.87  E-value=1.6e-21  Score=174.39  Aligned_cols=149  Identities=24%  Similarity=0.268  Sum_probs=113.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l  148 (250)
                      +|+||||    ||+||||++|+++|+++ ||+|++++|..+....+.          ...+++++.+|    .+.+.+++
T Consensus         1 m~~ilVt----GatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----------~~~~~~~~~~Dl~~~~~~~~~~~   66 (347)
T PRK11908          1 MKKVLIL----GVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----------NHPRMHFFEGDITINKEWIEYHV   66 (347)
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----------cCCCeEEEeCCCCCCHHHHHHHH
Confidence            3689999    99999999999999987 699999998654322111          11246666666    34566777


Q ss_pred             cCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC------C
Q 025587          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------K  206 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~------~  206 (250)
                      ++  +|+|||+|+                .|+.++.+++++|++.+ ++|||+||..+|+.....+++|++..      .
T Consensus        67 ~~--~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~  143 (347)
T PRK11908         67 KK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPIN  143 (347)
T ss_pred             cC--CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCC
Confidence            75  899999987                24778999999999987 79999999999997655566665432      1


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      ...+.|+.+|.+.|.         +++++++||+++|||+..
T Consensus       144 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~  185 (347)
T PRK11908        144 KPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLD  185 (347)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCcc
Confidence            123579888866543         689999999999999854

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.87  E-value=3e-21  Score=174.54  Aligned_cols=149  Identities=22%  Similarity=0.209  Sum_probs=114.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|+||||    ||+||||++++++|+++||+|++++|......  ...         ....+++.+|   .+.+.+++.
T Consensus        20 ~~~~IlVt----GgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~--~~~---------~~~~~~~~~Dl~d~~~~~~~~~   84 (370)
T PLN02695         20 EKLRICIT----GAGGFIASHIARRLKAEGHYIIASDWKKNEHM--SED---------MFCHEFHLVDLRVMENCLKVTK   84 (370)
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHhCCCEEEEEEecccccc--ccc---------cccceEEECCCCCHHHHHHHHh
Confidence            46899999    99999999999999999999999998653211  000         0113445555   566666666


Q ss_pred             CCcccEEEeCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC----CCccCCC--CCC
Q 025587          150 GVTFDVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----PPHVEGD--VVK  206 (250)
Q Consensus       150 ~~~~d~Vi~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~----~~~~e~~--~~~  206 (250)
                      +  +|+|||+|+                 .|+.++.+++++|++.++++||++||.++|+....    .++.|++  +..
T Consensus        85 ~--~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~  162 (370)
T PLN02695         85 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAE  162 (370)
T ss_pred             C--CCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCC
Confidence            5  799999995                 14778999999999999999999999999997532    2466654  455


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      |. +.|+..|...|.         +++++++||+++|||+++
T Consensus       163 p~-s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~  203 (370)
T PLN02695        163 PQ-DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGT  203 (370)
T ss_pred             CC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC
Confidence            54 789988866653         689999999999999754

>PLN02214 cinnamoyl-CoA reductase

Probab=99.87  E-value=2.8e-21  Score=172.88  Aligned_cols=156  Identities=17%  Similarity=0.190  Sum_probs=116.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .++|+||||    ||+||||++++++|+++||+|++++|+.+.....      .+..+.  ...++++.+|   .+++.+
T Consensus         8 ~~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~   77 (342)
T PLN02214          8 PAGKTVCVT----GAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT------HLRELEGGKERLILCKADLQDYEALKA   77 (342)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH------HHHHhhCCCCcEEEEecCcCChHHHHH
Confidence            356799999    9999999999999999999999999976432110      000011  1234555555   778888


Q ss_pred             hhcCCcccEEEeCCC-----------cCHHhHHHHHHHHHhCCCCEEEEEcCc-ccccCCCC---CCccCCCC------C
Q 025587          147 VVGGVTFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSA-GIYKPADE---PPHVEGDV------V  205 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag-----------~~~~~~~~ll~~~~~~~~~~~v~iSS~-~vy~~~~~---~~~~e~~~------~  205 (250)
                      ++++  +|+|||+|+           .|+.++.+++++|++.++++||++||. .+|+....   .+++|++.      .
T Consensus        78 ~~~~--~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~  155 (342)
T PLN02214         78 AIDG--CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK  155 (342)
T ss_pred             HHhc--CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcc
Confidence            8887  799999998           368899999999999999999999996 58875332   24677642      2


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .+ .+.|+.+|...|.         +++++++||++||||+..+
T Consensus       156 ~p-~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~  198 (342)
T PLN02214        156 NT-KNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP  198 (342)
T ss_pred             cc-ccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence            22 2568877755543         6899999999999998654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.87  E-value=4.5e-21  Score=176.62  Aligned_cols=150  Identities=18%  Similarity=0.205  Sum_probs=112.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..|+||||    ||+||||++|+++|+++||+|++++|...... ....     +  ....+++++.+|.  +...+.+ 
T Consensus       119 ~~mkILVT----GatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~-----~--~~~~~~~~~~~Di--~~~~~~~-  184 (436)
T PLN02166        119 KRLRIVVT----GGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVH-----L--FGNPRFELIRHDV--VEPILLE-  184 (436)
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhh-----h--ccCCceEEEECcc--ccccccC-
Confidence            45799999    99999999999999999999999998642211 1100     0  0112455666662  2223344 


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC-----CCCCCCC
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAG  210 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~-----~~~~~~~  210 (250)
                       +|+|||+|+                .|+.++.+++++|++.+. +||++||.++|+.....+.+|+.     +..+. +
T Consensus       185 -~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~-s  261 (436)
T PLN02166        185 -VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER-S  261 (436)
T ss_pred             -CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCC-C
Confidence             899999997                367889999999999886 89999999999987666777763     44443 6


Q ss_pred             hhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          211 HVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       211 ~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|+..|...|.         +++++++||+++|||++.
T Consensus       262 ~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~  299 (436)
T PLN02166        262 CYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMC  299 (436)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCC
Confidence            78877766654         689999999999999854

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.86  E-value=6.1e-21  Score=170.04  Aligned_cols=159  Identities=21%  Similarity=0.229  Sum_probs=115.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      +.++++||||    ||+||||++|+++|+++|++|+++.|+.+........  ..+.+  ..+++++.+|   .+++.++
T Consensus         6 ~~~~~~vlIt----G~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~--~~~~~~~~~Dl~d~~~~~~~   77 (338)
T PLN00198          6 PTGKKTACVI----GGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHL--RALQE--LGDLKIFGADLTDEESFEAP   77 (338)
T ss_pred             CCCCCeEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH--HhcCC--CCceEEEEcCCCChHHHHHH
Confidence            4557899999    9999999999999999999999999876432211000  00000  0135566665   7778888


Q ss_pred             hcCCcccEEEeCCC---------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccccCCC----CCCccCCC----
Q 025587          148 VGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHVEGD----  203 (250)
Q Consensus       148 l~~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~~----~~~~~e~~----  203 (250)
                      +++  +|+|||+|+               .|+.++.++++++++. ++++||++||..+|+...    ..+++|..    
T Consensus        78 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~  155 (338)
T PLN00198         78 IAG--CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDV  155 (338)
T ss_pred             Hhc--CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCch
Confidence            876  799999998               2577899999999886 589999999999998532    23444532    


Q ss_pred             -----CCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          204 -----VVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       204 -----~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                           +..| .+.|+.+|...|.         +++++++||+++|||++..
T Consensus       156 ~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~  205 (338)
T PLN00198        156 EFLTSEKPP-TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTS  205 (338)
T ss_pred             hhhhhcCCc-cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccC
Confidence                 1122 3668888865553         6899999999999998643

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.86  E-value=3.4e-21  Score=167.40  Aligned_cols=135  Identities=22%  Similarity=0.314  Sum_probs=112.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcccE
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV  155 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d~  155 (250)
                      +||||    ||+||||++++++|+++||+|++++|..                       .+..|.+.+.+++++.++|+
T Consensus         1 kilv~----G~tG~iG~~l~~~l~~~g~~v~~~~r~~-----------------------~d~~~~~~~~~~~~~~~~d~   53 (287)
T TIGR01214         1 RILIT----GANGQLGRELVQQLSPEGRVVVALTSSQ-----------------------LDLTDPEALERLLRAIRPDA   53 (287)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhcCCEEEEeCCcc-----------------------cCCCCHHHHHHHHHhCCCCE
Confidence            58999    9999999999999999999999999852                       11227888999998877899


Q ss_pred             EEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHH
Q 025587          156 VLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (250)
Q Consensus       156 Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~  219 (250)
                      |||+++.                |+.++.++++++++.+. +||++||.++|+.....+++|+++..+. ..|+.+|...
T Consensus        54 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~~K~~~  131 (287)
T TIGR01214        54 VVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPL-NVYGQSKLAG  131 (287)
T ss_pred             EEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCc-chhhHHHHHH
Confidence            9999982                45679999999998875 8999999999988767788898877664 6677666555


Q ss_pred             H-----hCCcEEEEecCeeecCCCC
Q 025587          220 E-----NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       220 e-----~~~~~~ilRp~~i~G~~~~  239 (250)
                      |     .+.+++++||+.+||++..
T Consensus       132 E~~~~~~~~~~~ilR~~~v~G~~~~  156 (287)
T TIGR01214       132 EQAIRAAGPNALIVRTSWLYGGGGG  156 (287)
T ss_pred             HHHHHHhCCCeEEEEeeecccCCCC
Confidence            4     4789999999999999853

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.86  E-value=1e-20  Score=169.51  Aligned_cols=158  Identities=16%  Similarity=0.115  Sum_probs=115.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++||||    ||+||||++++++|+++|++|+++.++.+........  ...  .....+.++.+|   .+.+.+++++
T Consensus         1 ~~~vlVt----GatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~   72 (355)
T PRK10217          1 MRKILIT----GGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL--APV--AQSERFAFEKVDICDRAELARVFTE   72 (355)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh--hhc--ccCCceEEEECCCcChHHHHHHHhh
Confidence            3689999    9999999999999999998866544332221111000  000  011234455555   7888888887


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHh---------CCCCEEEEEcCcccccCC--CCCCccCCC
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKS---------SGVKQFLFISSAGIYKPA--DEPPHVEGD  203 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~---------~~~~~~v~iSS~~vy~~~--~~~~~~e~~  203 (250)
                      .++|+|||+||                .|+.++.+++++|++         .++++||++||.++|+..  ...+++|+.
T Consensus        73 ~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~  152 (355)
T PRK10217         73 HQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETT  152 (355)
T ss_pred             cCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCC
Confidence            66999999998                367899999999986         356799999999999864  234688887


Q ss_pred             CCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          204 VVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +..+. +.|+.+|...|.         +++++++||+++|||++.+
T Consensus       153 ~~~p~-s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~  197 (355)
T PRK10217        153 PYAPS-SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP  197 (355)
T ss_pred             CCCCC-ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc
Confidence            77665 788887765443         6899999999999998743

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=8e-21  Score=169.67  Aligned_cols=158  Identities=16%  Similarity=0.137  Sum_probs=121.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+||||    ||+||||++|+++|+++|++|++++|..+..  ..+... ..........+++++.+|   .+.+.++++
T Consensus         1 ~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   75 (343)
T TIGR01472         1 KIALIT----GITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHI-YEDPHNVNKARMKLHYGDLTDSSNLRRIID   75 (343)
T ss_pred             CeEEEE----cCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhh-hhccccccccceeEEEeccCCHHHHHHHHH
Confidence            589999    9999999999999999999999999986421  111000 000000012345666665   788888888


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCC---EEEEEcCcccccCCCCCCccCCCCCCCCCC
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK---QFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~---~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~  210 (250)
                      +.++|+|||+|+                .|+.++.+++++|++.+++   +||++||..+||.....+++|+.+..|. +
T Consensus        76 ~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~  154 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR-S  154 (343)
T ss_pred             hCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC-C
Confidence            766899999998                2566899999999998764   8999999999998666678888887776 7


Q ss_pred             hhHHHHHHHHh---------CCcEEEEecCeeecCCC
Q 025587          211 HVQVEKYISEN---------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       211 ~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~  238 (250)
                      .|+.+|...|.         +++++..|+.++|||+.
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  191 (343)
T TIGR01472       155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRR  191 (343)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCC
Confidence            89988876663         57888999999999974

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=8.7e-21  Score=165.53  Aligned_cols=156  Identities=21%  Similarity=0.270  Sum_probs=118.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc---CCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~---~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      ++++|+||    ||+||||++|+++||++||.|++..|+++..++   +.+.     +. .....+.+.+|   ++.+.+
T Consensus         5 ~~~~VcVT----GAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l-----~~-a~~~l~l~~aDL~d~~sf~~   74 (327)
T KOG1502|consen    5 EGKKVCVT----GASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKL-----EG-AKERLKLFKADLLDEGSFDK   74 (327)
T ss_pred             CCcEEEEe----CCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhc-----cc-CcccceEEeccccccchHHH
Confidence            56899999    999999999999999999999999999866322   2111     11 11225566665   899999


Q ss_pred             hhcCCcccEEEeCCC---------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCC-----CCCCccCCCCC
Q 025587          147 VVGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPA-----DEPPHVEGDVV  205 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~-----~~~~~~e~~~~  205 (250)
                      ++++  +|+|+|+|.               ..++|+.|++++|++.. ++|+|++||...-...     +...++|....
T Consensus        75 ai~g--cdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~ws  152 (327)
T KOG1502|consen   75 AIDG--CDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWS  152 (327)
T ss_pred             HHhC--CCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCC
Confidence            9999  899999998               24789999999999977 9999999998654432     22345555433


Q ss_pred             CCC-----CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPD-----AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~-----~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ++.     ...|..+|.++|.         +++.+.+.|+.|+||.-.+
T Consensus       153 d~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  153 DLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             cHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence            221     2468877766655         6999999999999998655

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.86  E-value=6.9e-21  Score=170.56  Aligned_cols=154  Identities=21%  Similarity=0.242  Sum_probs=117.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+||||++++++|+++|++|++++|+.+........    + . ....+..+.+|   .+++.+++++
T Consensus         4 ~k~ilIt----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~-~-~~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         4 GKKVLVT----GHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFEL----L-N-LAKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             CCEEEEE----CCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHH----H-h-hcCCceEEEccCCCHHHHHHHHhh
Confidence            5799999    9999999999999999999999999876433211000    0 0 01234445554   7888888887


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCC-CCCccCCCCCCCCCChh
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~-~~~~~e~~~~~~~~~~y  212 (250)
                      .++|+|||+|+                .|+.++.++++++++.+ +++||++||..+|+... ..++.|.++..+. +.|
T Consensus        74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~-~~Y  152 (349)
T TIGR02622        74 FKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH-DPY  152 (349)
T ss_pred             cCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC-Ccc
Confidence            67899999998                36788999999998876 78999999999998643 3457777666554 667


Q ss_pred             HHHHHHHH----------------hCCcEEEEecCeeecCCC
Q 025587          213 QVEKYISE----------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       213 ~~~k~~~e----------------~~~~~~ilRp~~i~G~~~  238 (250)
                      +.+|...|                .+++++++||+.+|||++
T Consensus       153 ~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~  194 (349)
T TIGR02622       153 SSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD  194 (349)
T ss_pred             hhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence            77664332                168999999999999975

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.6e-20  Score=164.57  Aligned_cols=151  Identities=27%  Similarity=0.366  Sum_probs=117.6

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~~  152 (250)
                      +||||    ||+||||++|+++|+++||+|++++|.........            .++.++.+|   .+.+.+...+..
T Consensus         2 ~ILVt----G~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~   65 (314)
T COG0451           2 RILVT----GGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAKGVP   65 (314)
T ss_pred             eEEEE----cCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHhcCC
Confidence            49999    99999999999999999999999999875544221            234444444   455555555532


Q ss_pred             ccEEEeCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC-CCCCccCC-CCCCCCCChhH
Q 025587          153 FDVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEG-DVVKPDAGHVQ  213 (250)
Q Consensus       153 ~d~Vi~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~-~~~~~~e~-~~~~~~~~~y~  213 (250)
                       |+|||+++                 .|++++.+++++|++.++++|||.||.++|+.. ...+++|+ .+..|. +.|+
T Consensus        66 -d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~-~~Yg  143 (314)
T COG0451          66 -DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL-NPYG  143 (314)
T ss_pred             -CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC-CHHH
Confidence             99999998                 256789999999999999999999988877764 33467887 566665 3799


Q ss_pred             HHHHHHHh---------CCcEEEEecCeeecCCCCCCccc
Q 025587          214 VEKYISEN---------FSNWASFRPQYMIGSGNNKDCEE  244 (250)
Q Consensus       214 ~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~~~~  244 (250)
                      .+|...|.         +++++++||+.+|||++......
T Consensus       144 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~  183 (314)
T COG0451         144 VSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSS  183 (314)
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCc
Confidence            88877665         48999999999999998776433

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.86  E-value=6.2e-21  Score=168.41  Aligned_cols=159  Identities=18%  Similarity=0.175  Sum_probs=115.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..|+||||    ||+||||++++++|+++||+|++++|+.+........  ..+.. ...+++++.+|   ++.+.++++
T Consensus         3 ~~~~ilVt----GatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (322)
T PLN02662          3 EGKVVCVT----GASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHL--LALDG-AKERLHLFKANLLEEGSFDSVVD   75 (322)
T ss_pred             CCCEEEEE----CChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHH--HhccC-CCCceEEEeccccCcchHHHHHc
Confidence            35799999    9999999999999999999999999976432211000  00000 01245666666   677888888


Q ss_pred             CCcccEEEeCCC---------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcc--cccCC---CCCCccCCCCCCCC
Q 025587          150 GVTFDVVLDNNG---------------KNLDAVRPVADWAKSS-GVKQFLFISSAG--IYKPA---DEPPHVEGDVVKPD  208 (250)
Q Consensus       150 ~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~--vy~~~---~~~~~~e~~~~~~~  208 (250)
                      +  +|+|||+|+               .|+.++.++++++++. +++|||++||.+  +|+..   ...+++|+.+..+.
T Consensus        76 ~--~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~  153 (322)
T PLN02662         76 G--CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPA  153 (322)
T ss_pred             C--CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChh
Confidence            7  799999997               2578899999999887 899999999986  46532   22356776654432


Q ss_pred             -----CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          209 -----AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       209 -----~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                           .+.|+.+|.+.|.         +++++++||+++|||+..+
T Consensus       154 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~  199 (322)
T PLN02662        154 FCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQP  199 (322)
T ss_pred             HhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCC
Confidence                 2468877765543         6899999999999998643

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.85  E-value=1.7e-20  Score=181.22  Aligned_cols=151  Identities=21%  Similarity=0.274  Sum_probs=117.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH---HH-HHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AE-VGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~---~~-l~~  146 (250)
                      ..+|+||||    ||+||||++|+++|+++ ||+|++++|.......+          ....+++++.+|.   +. +.+
T Consensus       313 ~~~~~VLVT----GatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----------~~~~~~~~~~gDl~d~~~~l~~  378 (660)
T PRK08125        313 KRRTRVLIL----GVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----------LGHPRFHFVEGDISIHSEWIEY  378 (660)
T ss_pred             hcCCEEEEE----CCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----------cCCCceEEEeccccCcHHHHHH
Confidence            346899999    99999999999999986 79999999976432211          0112466777773   23 566


Q ss_pred             hhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC---CC
Q 025587          147 VVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV---KP  207 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~---~~  207 (250)
                      ++++  +|+|||+|+                .|+.++.+++++|++.+ ++|||+||..+||.....+++|+++.   .+
T Consensus       379 ~l~~--~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p  455 (660)
T PRK08125        379 HIKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGP  455 (660)
T ss_pred             HhcC--CCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCC
Confidence            6765  899999997                26788999999999988 89999999999997665678887643   11


Q ss_pred             ---CCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          208 ---DAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       208 ---~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                         ..+.|+.+|.+.|.         +++++++||+++|||++.
T Consensus       456 ~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~  499 (660)
T PRK08125        456 INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD  499 (660)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCcc
Confidence               23579988866554         689999999999999854

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=1.2e-20  Score=166.90  Aligned_cols=159  Identities=18%  Similarity=0.199  Sum_probs=115.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++||||    ||+||||++++++|+++||+|+++.|+.+..+.+.+..  .... ...+++++.+|   .+.+.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (322)
T PLN02986          4 GGKLVCVT----GASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLL--ALDG-AKERLKLFKADLLEESSFEQAIE   76 (322)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHH--hccC-CCCceEEEecCCCCcchHHHHHh
Confidence            35799999    99999999999999999999999999775432211000  0000 01245666666   677888888


Q ss_pred             CCcccEEEeCCC---------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccc--cCC---CCCCccCCCCCCC-
Q 025587          150 GVTFDVVLDNNG---------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKP-  207 (250)
Q Consensus       150 ~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy--~~~---~~~~~~e~~~~~~-  207 (250)
                      +  +|+|||+|+               .|+.++.+++++|++. +++|||++||.++|  +..   .+.+++|++...+ 
T Consensus        77 ~--~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  154 (322)
T PLN02986         77 G--CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPS  154 (322)
T ss_pred             C--CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChH
Confidence            7  799999997               2467899999999985 78999999998764  332   2334667654432 


Q ss_pred             ----CCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          208 ----DAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       208 ----~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                          ..+.|+.+|.+.|.         +++++++||+.+|||+..+
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~  200 (322)
T PLN02986        155 LCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQP  200 (322)
T ss_pred             HhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCC
Confidence                13668888766553         6999999999999997643

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=1.6e-20  Score=168.18  Aligned_cols=159  Identities=19%  Similarity=0.220  Sum_probs=114.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++||||    ||+||||++++++|+++|++|++++|+.+....+....  .... ....++++.+|   .+.+.++++
T Consensus         4 ~~k~iLVT----GatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~~~v~~Dl~d~~~~~~~~~   76 (351)
T PLN02650          4 QKETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL--DLPG-ATTRLTLWKADLAVEGSFDDAIR   76 (351)
T ss_pred             CCCEEEEe----CCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH--hccC-CCCceEEEEecCCChhhHHHHHh
Confidence            35799999    99999999999999999999999999765433211000  0000 01134556665   677888887


Q ss_pred             CCcccEEEeCCC---------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCC-CCCC-ccCCCCC------
Q 025587          150 GVTFDVVLDNNG---------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPA-DEPP-HVEGDVV------  205 (250)
Q Consensus       150 ~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~-~~~~-~~e~~~~------  205 (250)
                      +  +|+|||+|+               .|+.++.+++++|++.+ +++||++||.++|+.. ...+ ++|....      
T Consensus        77 ~--~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~  154 (351)
T PLN02650         77 G--CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCR  154 (351)
T ss_pred             C--CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhh
Confidence            6  799999997               25678999999999876 7899999999877653 2223 4555321      


Q ss_pred             --CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 --KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 --~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                        ....+.|+.+|.+.|.         +++++++||+++|||++..
T Consensus       155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~  200 (351)
T PLN02650        155 RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIST  200 (351)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCC
Confidence              1112468888866654         6999999999999998654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.85  E-value=9.3e-21  Score=165.88  Aligned_cols=136  Identities=21%  Similarity=0.233  Sum_probs=109.9

Q ss_pred             EEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcccEEE
Q 025587           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVL  157 (250)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d~Vi  157 (250)
                      |||    ||+||||++|++.|+++|++|+++.+..                      ..+..|.+++.++++..++|+||
T Consensus         1 lIt----Ga~GfiG~~l~~~L~~~g~~v~~~~~~~----------------------~~Dl~~~~~l~~~~~~~~~d~Vi   54 (306)
T PLN02725          1 FVA----GHRGLVGSAIVRKLEALGFTNLVLRTHK----------------------ELDLTRQADVEAFFAKEKPTYVI   54 (306)
T ss_pred             Ccc----cCCCcccHHHHHHHHhCCCcEEEeeccc----------------------cCCCCCHHHHHHHHhccCCCEEE
Confidence            689    9999999999999999999988765322                      01223788899988887799999


Q ss_pred             eCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC----CCCCCCChhHHHH
Q 025587          158 DNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHVQVEK  216 (250)
Q Consensus       158 ~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~----~~~~~~~~y~~~k  216 (250)
                      |+|+                 .|+.++.+++++|++.++++||++||..+|+.....|++|++    +..|....|+.+|
T Consensus        55 h~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  134 (306)
T PLN02725         55 LAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAK  134 (306)
T ss_pred             EeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHH
Confidence            9986                 256689999999999999999999999999987677888876    3334323588777


Q ss_pred             HHHHh---------CCcEEEEecCeeecCCCC
Q 025587          217 YISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       217 ~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .+.|.         +++++++||+.+|||++.
T Consensus       135 ~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~  166 (306)
T PLN02725        135 IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDN  166 (306)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEecceeCCCCC
Confidence            66553         689999999999999754

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=2.8e-20  Score=158.62  Aligned_cols=151  Identities=20%  Similarity=0.154  Sum_probs=123.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCC-----CccccCCCCCCCcccchhcCCceEEeC---CHHHH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGD-----ENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEV  144 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~-----~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l  144 (250)
                      |++|||    ||.||||++++++++++.  .+|+.++.-.     +.+..+.+          .++..++++   |.+.+
T Consensus         1 ~~iLVT----GGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~----------~~~~~fv~~DI~D~~~v   66 (340)
T COG1088           1 MKILVT----GGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED----------SPRYRFVQGDICDRELV   66 (340)
T ss_pred             CcEEEe----cCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc----------CCCceEEeccccCHHHH
Confidence            589999    999999999999999985  4577777532     22222211          234555555   58899


Q ss_pred             HhhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCCC--CCccCCCCC
Q 025587          145 GNVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADE--PPHVEGDVV  205 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~--~~~~e~~~~  205 (250)
                      .++++..++|+|+|+|+                .|+.||.++|+++++...+ ||+++||..|||....  ..++|.++.
T Consensus        67 ~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          67 DRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             HHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCC
Confidence            99999878999999998                5899999999999997754 9999999999998644  368999999


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|. ++|.++|+..++         |++++|.|+.+-|||.+.+
T Consensus       147 ~Ps-SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfp  189 (340)
T COG1088         147 NPS-SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP  189 (340)
T ss_pred             CCC-CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc
Confidence            997 999999987776         7999999999999998865

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.84  E-value=2.3e-20  Score=172.18  Aligned_cols=151  Identities=17%  Similarity=0.172  Sum_probs=111.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +.|+||||    ||+||||++|+++|+++|++|++++|..........      ......+++++.+|.  +.+.+.+  
T Consensus       118 ~~~kILVT----GatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~------~~~~~~~~~~i~~D~--~~~~l~~--  183 (442)
T PLN02206        118 KGLRVVVT----GGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM------HHFSNPNFELIRHDV--VEPILLE--  183 (442)
T ss_pred             CCCEEEEE----CcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhh------hhccCCceEEEECCc--cChhhcC--
Confidence            46899999    999999999999999999999999875322110000      001123456666662  2223444  


Q ss_pred             ccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC-----CCCCCCCh
Q 025587          153 FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGH  211 (250)
Q Consensus       153 ~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~-----~~~~~~~~  211 (250)
                      +|+|||+|+                .|+.++.+++++|++.++ +||++||..+|+.....+..|+.     +..+ .+.
T Consensus       184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~-~s~  261 (442)
T PLN02206        184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGV-RSC  261 (442)
T ss_pred             CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCc-cch
Confidence            899999997                367889999999999886 89999999999987666777763     2232 256


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      |+..|...|.         +++++++||+++|||+..
T Consensus       262 Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~  298 (442)
T PLN02206        262 YDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMC  298 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCC
Confidence            8777755544         689999999999999753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.84  E-value=3.1e-20  Score=166.54  Aligned_cols=157  Identities=18%  Similarity=0.153  Sum_probs=114.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ...|+||||    ||+||||++++++|+++|++|++++|+.+....+...    +.  ...+++++.+|   .+.+.+++
T Consensus         8 ~~~~~vLVt----G~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~   77 (353)
T PLN02896          8 SATGTYCVT----GATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSK----WK--EGDRLRLFRADLQEEGSFDEAV   77 (353)
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----hc--cCCeEEEEECCCCCHHHHHHHH
Confidence            446799999    9999999999999999999999999876433221100    00  01245566666   77788888


Q ss_pred             cCCcccEEEeCCCc------------------C-----HHhHHHHHHHHHhCC-CCEEEEEcCcccccCCC-----CCCc
Q 025587          149 GGVTFDVVLDNNGK------------------N-----LDAVRPVADWAKSSG-VKQFLFISSAGIYKPAD-----EPPH  199 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~------------------~-----~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~-----~~~~  199 (250)
                      .+  +|+|||+|+.                  |     +.++.+++++|++.+ +++||++||.++|+...     ..++
T Consensus        78 ~~--~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~  155 (353)
T PLN02896         78 KG--CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVV  155 (353)
T ss_pred             cC--CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCcc
Confidence            76  7999999982                  1     267889999998865 88999999999998532     1345


Q ss_pred             cCCCC--C------CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          200 VEGDV--V------KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~--~------~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +|+.+  .      .+..+.|+.+|.+.|.         +++++++||+++|||+...
T Consensus       156 ~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~  213 (353)
T PLN02896        156 DETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTP  213 (353)
T ss_pred             CcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCC
Confidence            66521  1      1122478888876664         6899999999999998653

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.84  E-value=1.8e-20  Score=164.71  Aligned_cols=146  Identities=17%  Similarity=0.287  Sum_probs=107.4

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHH-HHhhhcC--
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAE-VGNVVGG--  150 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~-l~~~l~~--  150 (250)
                      ||||    ||+||||++|+++|+++|++|+++.|+.+.....        ..+    ......|   .++ +.+++.+  
T Consensus         2 ilVt----Ga~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~----~~~~~~d~~~~~~~~~~~~~~~~   65 (308)
T PRK11150          2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNL----VDLDIADYMDKEDFLAQIMAGDD   65 (308)
T ss_pred             EEEe----cCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------Hhh----hhhhhhhhhhHHHHHHHHhcccc
Confidence            8999    9999999999999999999877776654321100        000    0111223   223 3333332  


Q ss_pred             -CcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          151 -VTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       151 -~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                       .++|+|||+|+              .|+.++.+++++|++.++ +||++||..+|+.....+..|.++..|. +.|+..
T Consensus        66 ~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~s  143 (308)
T PRK11150         66 FGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL-NVYGYS  143 (308)
T ss_pred             cCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC-CHHHHH
Confidence             25899999997              257789999999999887 6999999999998655567777777765 779988


Q ss_pred             HHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          216 KYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       216 k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |...|.         +++++++||+.+|||++..
T Consensus       144 K~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~  177 (308)
T PRK11150        144 KFLFDEYVRQILPEANSQICGFRYFNVYGPREGH  177 (308)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCC
Confidence            876553         6899999999999998654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=3.3e-20  Score=164.24  Aligned_cols=158  Identities=15%  Similarity=0.150  Sum_probs=116.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+||||++++++|+++||+|++++|+.+........ . ... -....++++.+|   .+++.+++++
T Consensus         5 ~k~vlVt----G~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~-~~~-~~~~~~~~~~~D~~d~~~~~~~~~~   77 (325)
T PLN02989          5 GKVVCVT----GASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHL-L-ALD-GAKERLKLFKADLLDEGSFELAIDG   77 (325)
T ss_pred             CCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHH-H-hcc-CCCCceEEEeCCCCCchHHHHHHcC
Confidence            5899999    9999999999999999999999998886543211000 0 000 001245566665   7778888876


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccccCC-----CCCCccCCCCCCCC
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA-----DEPPHVEGDVVKPD  208 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~-----~~~~~~e~~~~~~~  208 (250)
                        +|+|||+||                .|+.++.++++++.+. +.++||++||..+|+..     ...+++|+.+..|.
T Consensus        78 --~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  155 (325)
T PLN02989         78 --CETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS  155 (325)
T ss_pred             --CCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh
Confidence              799999998                2577899999999884 57899999998877543     23356787766542


Q ss_pred             -----CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          209 -----AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       209 -----~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                           .+.|+.+|...|.         +++++++||+++|||+..+
T Consensus       156 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~  201 (325)
T PLN02989        156 FAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQP  201 (325)
T ss_pred             HhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCC
Confidence                 2568877765553         6899999999999998754

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.84  E-value=6.8e-20  Score=161.64  Aligned_cols=148  Identities=24%  Similarity=0.354  Sum_probs=116.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+|+||++++++|+++||+|++++|+++....+.           ..+++++.+|   .+++.+++++ 
T Consensus         1 ~~vlIt----G~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~l~~~~~~-   64 (328)
T TIGR03466         1 MKVLVT----GATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-----------GLDVEIVEGDLRDPASLRKAVAG-   64 (328)
T ss_pred             CeEEEE----CCccchhHHHHHHHHHCCCEEEEEEecCccccccc-----------cCCceEEEeeCCCHHHHHHHHhC-
Confidence            479999    99999999999999999999999999875433221           1245555554   7788888876 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccC-CCCCCccCCCCCCCC--CChhHH
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD--AGHVQV  214 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~-~~~~~~~e~~~~~~~--~~~y~~  214 (250)
                       +|+|||+++              .|+.++.++++++++.++++||++||..+|+. ..+.+++|+.+..+.  ...|+.
T Consensus        65 -~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~  143 (328)
T TIGR03466        65 -CRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKR  143 (328)
T ss_pred             -CCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHH
Confidence             799999986              25778999999999999999999999999986 344577887766542  246776


Q ss_pred             HHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          215 EKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       215 ~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|.+.|.         +++++++||+.+||++..
T Consensus       144 sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~  177 (328)
T TIGR03466       144 SKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI  177 (328)
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCC
Confidence            6654432         689999999999999864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=7.6e-20  Score=163.08  Aligned_cols=160  Identities=17%  Similarity=0.113  Sum_probs=121.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc--cCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+||||++++++|+++|++|++++|..+...  .+...  .........++.++.+|   .+.+.++
T Consensus         5 ~~~~vlVT----GatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~   78 (340)
T PLN02653          5 PRKVALIT----GITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHI--YIDPHPNKARMKLHYGDLSDASSLRRW   78 (340)
T ss_pred             CCCEEEEE----CCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhh--ccccccccCceEEEEecCCCHHHHHHH
Confidence            45789999    99999999999999999999999998754211  11100  00000011235555555   7788888


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCC-----EEEEEcCcccccCCCCCCccCCCCCC
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~-----~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      ++...+|+|||+|+                .|+.++.++++++++.+++     +||++||..+||.... ++.|+++..
T Consensus        79 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~  157 (340)
T PLN02653         79 LDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFH  157 (340)
T ss_pred             HHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCC
Confidence            88766899999998                2567899999999998865     8999999999998665 788888887


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |. +.|+.+|...|.         +++++..|+.++|||+...
T Consensus       158 p~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~  199 (340)
T PLN02653        158 PR-SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE  199 (340)
T ss_pred             CC-ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc
Confidence            75 789988876665         4677888999999997543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=5.7e-20  Score=177.82  Aligned_cols=156  Identities=20%  Similarity=0.253  Sum_probs=116.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      +.|+||||    ||+||||++|+++|+++  ||+|++++|..  +....+...       ....+++++.+|   .+.+.
T Consensus         5 ~~~~VLVT----GatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~-------~~~~~v~~~~~Dl~d~~~~~   73 (668)
T PLN02260          5 EPKNILIT----GAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS-------KSSPNFKFVKGDIASADLVN   73 (668)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc-------ccCCCeEEEECCCCChHHHH
Confidence            46899999    99999999999999998  68999998753  111111100       012356777777   55566


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCC---ccCCCCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPP---HVEGDVV  205 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~---~~e~~~~  205 (250)
                      .++...++|+|||+|+                .|+.++.++++++++.+ +++||++||..+|+.....+   ..|+++.
T Consensus        74 ~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~  153 (668)
T PLN02260         74 YLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL  153 (668)
T ss_pred             HHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC
Confidence            6665456999999998                25678999999999987 89999999999999865432   3566666


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|. +.|+..|...|.         +++++++||+.||||++..
T Consensus       154 ~p~-~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~  196 (668)
T PLN02260        154 LPT-NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP  196 (668)
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc
Confidence            554 668877755543         6899999999999998653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.83  E-value=4.7e-20  Score=164.81  Aligned_cols=155  Identities=22%  Similarity=0.240  Sum_probs=118.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc----cCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD----KMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~----~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ++++||||    ||+||||++++++|+++|++|++++|......    .+...     ......+++++.+|   ++++.
T Consensus         4 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~l~   74 (352)
T PLN02240          4 MGRTILVT----GGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKEL-----AGDLGDNLVFHKVDLRDKEALE   74 (352)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHh-----hcccCccceEEecCcCCHHHHH
Confidence            35799999    99999999999999999999999987542211    00000     00011235555555   78888


Q ss_pred             hhhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~  209 (250)
                      ++++...+|+|||+++.                |+.++.+++++|++.++++||++||.++|+.....+++|+++..+. 
T Consensus        75 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~-  153 (352)
T PLN02240         75 KVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT-  153 (352)
T ss_pred             HHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC-
Confidence            88876569999999972                4678999999999989999999999999997767788999888775 


Q ss_pred             ChhHHHHHHHHh----------CCcEEEEecCeeecCC
Q 025587          210 GHVQVEKYISEN----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       210 ~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~  237 (250)
                      ..|+.+|...|.          +++++++|++++||++
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~  191 (352)
T PLN02240        154 NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAH  191 (352)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCC
Confidence            778877755543          4678999999999975

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.83  E-value=6.7e-20  Score=162.93  Aligned_cols=154  Identities=23%  Similarity=0.277  Sum_probs=114.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~  151 (250)
                      |+||||    ||+||||++++++|+++|++|++++|..+......    ..+.......+.++.+   |.+.+.+++...
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (338)
T PRK10675          1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVL----PVIERLGGKHPTFVEGDIRNEALLTEILHDH   72 (338)
T ss_pred             CeEEEE----CCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHH----HHHHHhcCCCceEEEccCCCHHHHHHHHhcC
Confidence            589999    99999999999999999999999987543221100    0000111123344444   477888888765


Q ss_pred             cccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC-CCCCChhHH
Q 025587          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPDAGHVQV  214 (250)
Q Consensus       152 ~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~-~~~~~~y~~  214 (250)
                      ++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+++. .+. +.|+.
T Consensus        73 ~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~-~~Y~~  151 (338)
T PRK10675         73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ-SPYGK  151 (338)
T ss_pred             CCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC-ChhHH
Confidence            69999999972                4568999999999999999999999999997766678888876 343 67887


Q ss_pred             HHHHHHh----------CCcEEEEecCeeecCC
Q 025587          215 EKYISEN----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       215 ~k~~~e~----------~~~~~ilRp~~i~G~~  237 (250)
                      +|...|.          +++++++|++.+||++
T Consensus       152 sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~  184 (338)
T PRK10675        152 SKLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCC
Confidence            6655442          4789999999999974

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.83  E-value=5.5e-20  Score=149.70  Aligned_cols=144  Identities=31%  Similarity=0.520  Sum_probs=115.2

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCCcc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~~~  153 (250)
                      |+|+    ||||++|++++++|+++||+|+++.|++++.+.             ..+++++.+|   ++.+.+++.+  +
T Consensus         1 I~V~----GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~~--~   61 (183)
T PF13460_consen    1 ILVF----GATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALKG--A   61 (183)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHTT--S
T ss_pred             eEEE----CCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhhh--c
Confidence            7999    999999999999999999999999999865542             3467788777   8888999997  7


Q ss_pred             cEEEeCCC---cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC--CCCChhHHHHHHHHhCCcEEEE
Q 025587          154 DVVLDNNG---KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK--PDAGHVQVEKYISENFSNWASF  228 (250)
Q Consensus       154 d~Vi~~ag---~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~--~~~~~y~~~k~~~e~~~~~~il  228 (250)
                      |+||++++   .+...++++++++++.+++|+|++|+.++|.........+..+..  ....+...|+.+.+.+++|+++
T Consensus        62 d~vi~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~iv  141 (183)
T PF13460_consen   62 DAVIHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIV  141 (183)
T ss_dssp             SEEEECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEE
T ss_pred             chhhhhhhhhcccccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEE
Confidence            99999998   457889999999999999999999999999865442111111110  0123344667777789999999


Q ss_pred             ecCeeecCCCC
Q 025587          229 RPQYMIGSGNN  239 (250)
Q Consensus       229 Rp~~i~G~~~~  239 (250)
                      ||+.+||+...
T Consensus       142 rp~~~~~~~~~  152 (183)
T PF13460_consen  142 RPGWIYGNPSR  152 (183)
T ss_dssp             EESEEEBTTSS
T ss_pred             ECcEeEeCCCc
Confidence            99999999744

...

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.83  E-value=2.2e-20  Score=163.31  Aligned_cols=142  Identities=25%  Similarity=0.386  Sum_probs=108.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      ||||||    ||+|++|++|++.|.++|++|+.+.|..                       ++..|.+.+.+.+...++|
T Consensus         1 MriLI~----GasG~lG~~l~~~l~~~~~~v~~~~r~~-----------------------~dl~d~~~~~~~~~~~~pd   53 (286)
T PF04321_consen    1 MRILIT----GASGFLGSALARALKERGYEVIATSRSD-----------------------LDLTDPEAVAKLLEAFKPD   53 (286)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHTTTSEEEEEESTTC-----------------------S-TTSHHHHHHHHHHH--S
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhhCCCEEEEeCchh-----------------------cCCCCHHHHHHHHHHhCCC
Confidence            699999    9999999999999999999999997763                       1123788899998877799


Q ss_pred             EEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||||+                +|+.++.+++++|++.|. ++||+||..||+.....|+.|++++.|. +.|+..|..
T Consensus        54 ~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~-~~YG~~K~~  131 (286)
T PF04321_consen   54 VVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPL-NVYGRSKLE  131 (286)
T ss_dssp             EEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----S-SHHHHHHHH
T ss_pred             eEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCC-CHHHHHHHH
Confidence            9999998                467889999999999887 9999999999998888889999999987 889988877


Q ss_pred             HHh-----CCcEEEEecCeeecCCCCCCccccc
Q 025587          219 SEN-----FSNWASFRPQYMIGSGNNKDCEEWF  246 (250)
Q Consensus       219 ~e~-----~~~~~ilRp~~i~G~~~~~~~~~~~  246 (250)
                      .|.     .-++.|+|++.+||+ ....+..|+
T Consensus       132 ~E~~v~~~~~~~~IlR~~~~~g~-~~~~~~~~~  163 (286)
T PF04321_consen  132 GEQAVRAACPNALILRTSWVYGP-SGRNFLRWL  163 (286)
T ss_dssp             HHHHHHHH-SSEEEEEE-SEESS-SSSSHHHHH
T ss_pred             HHHHHHHhcCCEEEEecceeccc-CCCchhhhH
Confidence            765     358999999999999 333444443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.82  E-value=7.6e-20  Score=161.87  Aligned_cols=136  Identities=18%  Similarity=0.289  Sum_probs=108.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    |||||||++++++|+++||+|++++|+.+....           +...+++++.+|   ++++.+++++ 
T Consensus         1 MkIlVt----GatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~-----------l~~~~v~~v~~Dl~d~~~l~~al~g-   64 (317)
T CHL00194          1 MSLLVI----GATGTLGRQIVRQALDEGYQVRCLVRNLRKASF-----------LKEWGAELVYGDLSLPETLPPSFKG-   64 (317)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh-----------HhhcCCEEEECCCCCHHHHHHHHCC-
Confidence            589999    999999999999999999999999998643321           122357777776   7888999988 


Q ss_pred             cccEEEeCCC-----------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH
Q 025587          152 TFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (250)
Q Consensus       152 ~~d~Vi~~ag-----------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e  220 (250)
                       +|+|||+++           .|+.++.+++++|+++|++|||++|+.+.+.... .+        ....++.+|+++.+
T Consensus        65 -~d~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~-~~--------~~~~K~~~e~~l~~  134 (317)
T CHL00194         65 -VTAIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPY-IP--------LMKLKSDIEQKLKK  134 (317)
T ss_pred             -CCEEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCC-Ch--------HHHHHHHHHHHHHH
Confidence             799999876           3677899999999999999999999965431110 01        11256778888888


Q ss_pred             hCCcEEEEecCeeecC
Q 025587          221 NFSNWASFRPQYMIGS  236 (250)
Q Consensus       221 ~~~~~~ilRp~~i~G~  236 (250)
                      .+++++++||+.+|+.
T Consensus       135 ~~l~~tilRp~~~~~~  150 (317)
T CHL00194        135 SGIPYTIFRLAGFFQG  150 (317)
T ss_pred             cCCCeEEEeecHHhhh
Confidence            8999999999988865

>PLN02686 cinnamoyl-CoA reductase

Probab=99.82  E-value=1.9e-19  Score=162.66  Aligned_cols=160  Identities=22%  Similarity=0.295  Sum_probs=113.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeCC---HHHHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~D---~~~l~  145 (250)
                      ..++|+||||    ||+||||++++++|+++||+|+++.|+.+..+.+....  .+.+  ....+++++.+|   .+.+.
T Consensus        50 ~~~~k~VLVT----GatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~--~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         50 DAEARLVCVT----GGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREME--MFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             CCCCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hhccccccCCceEEEEcCCCCHHHHH
Confidence            3567899999    99999999999999999999999888764332221100  0000  001235566665   77788


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhC-CCCEEEEEcCc--ccccCC--CC--CCccCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS-GVKQFLFISSA--GIYKPA--DE--PPHVEG  202 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~--~vy~~~--~~--~~~~e~  202 (250)
                      +++++  +|.|||+++                .|+.++.+++++|++. ++++||++||.  .+|+..  ..  .+++|+
T Consensus       124 ~~i~~--~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~  201 (367)
T PLN02686        124 EAFDG--CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE  201 (367)
T ss_pred             HHHHh--ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence            88887  799999876                2567899999999985 79999999996  477642  22  235554


Q ss_pred             CCC------CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          203 DVV------KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~------~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      ...      .+ .+.|+.+|...|.         +++++++||++||||+..
T Consensus       202 ~~~~~~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~  252 (367)
T PLN02686        202 SWSDESFCRDN-KLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFF  252 (367)
T ss_pred             CCCChhhcccc-cchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCC
Confidence            322      22 2568877755443         699999999999999754

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.81  E-value=6.8e-19  Score=154.25  Aligned_cols=152  Identities=16%  Similarity=0.165  Sum_probs=113.7

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +||||    ||+|+||++++++|+++|  ++|++++|....  .+.+.+     +.  ...+++++.+|   ++++.+++
T Consensus         1 ~ilIt----GatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~Dl~~~~~~~~~~   69 (317)
T TIGR01181         1 RILVT----GGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLAD-----LE--DNPRYRFVKGDIGDRELVSRLF   69 (317)
T ss_pred             CEEEE----cCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhh-----hc--cCCCcEEEEcCCcCHHHHHHHH
Confidence            58999    999999999999999987  789988874311  111100     00  11245555555   78888888


Q ss_pred             cCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCCCC-CccCCCCCCCCCC
Q 025587          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEP-PHVEGDVVKPDAG  210 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~-~~~e~~~~~~~~~  210 (250)
                      ++.++|+|||+++                .|+.++.++++++++.+.+ ++|++||..+|+..... ++.|.++..+. .
T Consensus        70 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~-~  148 (317)
T TIGR01181        70 TEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS-S  148 (317)
T ss_pred             hhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC-C
Confidence            8767899999997                2566789999999986543 89999999999975432 57787776665 6


Q ss_pred             hhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          211 HVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       211 ~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|+..|...|.         +++++++||+.+|||+..
T Consensus       149 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~  186 (317)
T TIGR01181       149 PYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQF  186 (317)
T ss_pred             chHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCC
Confidence            78877755443         689999999999999764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.81  E-value=6.3e-19  Score=157.73  Aligned_cols=153  Identities=18%  Similarity=0.156  Sum_probs=111.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCC--ccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      |+||||    ||+||||++++++|+++|++ |+++++...  ....+...       .....++++.+   |.+++.+++
T Consensus         1 mkilIT----GgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~   69 (352)
T PRK10084          1 MKILVT----GGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADV-------SDSERYVFEHADICDRAELDRIF   69 (352)
T ss_pred             CeEEEE----CCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhc-------ccCCceEEEEecCCCHHHHHHHH
Confidence            479999    99999999999999999976 555554321  11111000       00123344444   588888888


Q ss_pred             cCCcccEEEeCCC----------------cCHHhHHHHHHHHHhC---------CCCEEEEEcCcccccCCC--------
Q 025587          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS---------GVKQFLFISSAGIYKPAD--------  195 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~---------~~~~~v~iSS~~vy~~~~--------  195 (250)
                      +...+|+|||+|+                .|+.++.+++++|++.         ++++||++||..+|+...        
T Consensus        70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         70 AQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             HhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            7666999999998                4688999999999874         467999999999998631        


Q ss_pred             -C-CCccCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          196 -E-PPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 -~-~~~~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                       . .+++|+++..|. +.|+.+|...|.         +++++++|++.+|||+..
T Consensus       150 ~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~  203 (352)
T PRK10084        150 EELPLFTETTAYAPS-SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHF  203 (352)
T ss_pred             ccCCCccccCCCCCC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcC
Confidence             1 236777777665 678888766543         689999999999999853

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.80  E-value=7.4e-19  Score=156.07  Aligned_cols=156  Identities=22%  Similarity=0.276  Sum_probs=114.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++.+++||    ||+||+|++|+++|+++|  .+|++++..+.... +....    .......++.+.+|   ...+.++
T Consensus         3 ~~~~vlVt----GG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~----~~~~~~~v~~~~~D~~~~~~i~~a   73 (361)
T KOG1430|consen    3 KKLSVLVT----GGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAEL----TGFRSGRVTVILGDLLDANSISNA   73 (361)
T ss_pred             cCCEEEEE----CCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhh----hcccCCceeEEecchhhhhhhhhh
Confidence            45789999    999999999999999998  89999998763211 11110    00124567777787   5666666


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC-CCccCCCCCCCC-C
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVVKPD-A  209 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~-~~~~e~~~~~~~-~  209 (250)
                      +++  + .|+|+++                +|+.+|.+++++|++.|++++||+||..|...... ..-+|+.+.... .
T Consensus        74 ~~~--~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~  150 (361)
T KOG1430|consen   74 FQG--A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHI  150 (361)
T ss_pred             ccC--c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccc
Confidence            666  5 6777766                58999999999999999999999999998887654 333444333211 2


Q ss_pred             ChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          210 GHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       210 ~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +.|+.+|..+|.         .+..++|||..||||++..
T Consensus       151 d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~  190 (361)
T KOG1430|consen  151 DPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR  190 (361)
T ss_pred             cccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc
Confidence            467777766665         2679999999999999765

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.80  E-value=2e-18  Score=151.87  Aligned_cols=151  Identities=26%  Similarity=0.347  Sum_probs=115.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      +||||    ||+|+||++++++|+++|++|++++|...... .+...     ..  ..+++.+.+|   .+++.+++...
T Consensus         1 kvlV~----GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~D~~~~~~~~~~~~~~   69 (328)
T TIGR01179         1 KILVT----GGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG-----ER--ITRVTFVEGDLRDRELLDRLFEEH   69 (328)
T ss_pred             CEEEe----CCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh-----cc--ccceEEEECCCCCHHHHHHHHHhC
Confidence            58999    99999999999999999999998876432211 11000     00  0134455555   78888888765


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                      ++|+|||++|                .|+.++.+++++|++.++++||++||.++|+.....+++|+++..+. ..|+..
T Consensus        70 ~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~-~~y~~s  148 (328)
T TIGR01179        70 KIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI-NPYGRS  148 (328)
T ss_pred             CCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCC-CchHHH
Confidence            6999999998                25778999999999999999999999999987766678888877765 678766


Q ss_pred             HHHHH----------hCCcEEEEecCeeecCCC
Q 025587          216 KYISE----------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       216 k~~~e----------~~~~~~ilRp~~i~G~~~  238 (250)
                      |...|          .+++++++||+.+||+..
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~  181 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADP  181 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCC
Confidence            65444          368899999999999853

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.4e-18  Score=152.41  Aligned_cols=155  Identities=16%  Similarity=0.159  Sum_probs=109.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc--CCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK--MKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~--~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +++||||    ||+||||++++++|+++||+|++++|+.+....  ....    +.. ...+++++.+|   .+.+.+++
T Consensus         6 ~k~vlVT----GatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~d~~~~~~~l   76 (297)
T PLN02583          6 SKSVCVM----DASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRG----LSC-EEERLKVFDVDPLDYHSILDAL   76 (297)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHh----ccc-CCCceEEEEecCCCHHHHHHHH
Confidence            5789999    999999999999999999999999986422110  0000    000 01245555555   77788888


Q ss_pred             cCCcccEEEeCCC--------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccc--cCC---CCCCccCCCCCCCC
Q 025587          149 GGVTFDVVLDNNG--------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIY--KPA---DEPPHVEGDVVKPD  208 (250)
Q Consensus       149 ~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy--~~~---~~~~~~e~~~~~~~  208 (250)
                      .+  +|.|+|.++              .|+.++.++++++.+. ++++||++||...+  ++.   ...+++|+++..+.
T Consensus        77 ~~--~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~  154 (297)
T PLN02583         77 KG--CSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQN  154 (297)
T ss_pred             cC--CCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHH
Confidence            87  799998764              3578999999999886 68999999998764  311   22356676543211


Q ss_pred             -----CChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          209 -----AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       209 -----~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                           ...|+.+|.++|.         ++++++|||+.||||+..
T Consensus       155 ~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        155 FCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             HHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence                 1257776654443         699999999999999764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.79  E-value=9.3e-19  Score=159.30  Aligned_cols=150  Identities=21%  Similarity=0.296  Sum_probs=110.4

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ..++++||||    ||+|+||++++++|+++||+|++++|+.+........  .... ....+++++.+|   ++++.++
T Consensus        57 ~~~~~kVLVt----GatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~-~~~~~v~~v~~Dl~d~~~l~~~  129 (390)
T PLN02657         57 EPKDVTVLVV----GATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGK--EDTK-KELPGAEVVFGDVTDADSLRKV  129 (390)
T ss_pred             CCCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchh--hHHh-hhcCCceEEEeeCCCHHHHHHH
Confidence            4456899999    9999999999999999999999999987543211000  0000 011245566555   8888888


Q ss_pred             hcCC--cccEEEeCCC-----------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          148 VGGV--TFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       148 l~~~--~~d~Vi~~ag-----------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                      +++.  .+|+||||++           +|+.++.++++++++.|+++||++||.++|++...          ....+...
T Consensus       130 ~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~----------~~~sK~~~  199 (390)
T PLN02657        130 LFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLE----------FQRAKLKF  199 (390)
T ss_pred             HHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchH----------HHHHHHHH
Confidence            8753  4899999986           25678999999999999999999999987753211          01245566


Q ss_pred             HHHHHH--hCCcEEEEecCeeecCC
Q 025587          215 EKYISE--NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       215 ~k~~~e--~~~~~~ilRp~~i~G~~  237 (250)
                      |+.+.+  .+++|+++||+.+||+.
T Consensus       200 E~~l~~~~~gl~~tIlRp~~~~~~~  224 (390)
T PLN02657        200 EAELQALDSDFTYSIVRPTAFFKSL  224 (390)
T ss_pred             HHHHHhccCCCCEEEEccHHHhccc
Confidence            666665  68999999999999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.79  E-value=1.1e-18  Score=147.86  Aligned_cols=152  Identities=21%  Similarity=0.202  Sum_probs=116.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ...++|+||    ||.||||+||+++|+.+||+|++++.-..........      .......+.+..|  -+..++.+ 
T Consensus        25 ~~~lrI~it----GgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~------~~~~~~fel~~hd--v~~pl~~e-   91 (350)
T KOG1429|consen   25 SQNLRILIT----GGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEH------WIGHPNFELIRHD--VVEPLLKE-   91 (350)
T ss_pred             CCCcEEEEe----cCcchHHHHHHHHHHhcCCeEEEEecccccchhhcch------hccCcceeEEEee--chhHHHHH-
Confidence            345899999    9999999999999999999999999755332211100      0122344455444  23345555 


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC-----CCCCC
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-----KPDAG  210 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~-----~~~~~  210 (250)
                       +|-|+|+|+                .|+.++.+++-.|++.+ +||++.||.+|||++...|..|+...     .+ ++
T Consensus        92 -vD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigp-r~  168 (350)
T KOG1429|consen   92 -VDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGP-RS  168 (350)
T ss_pred             -hhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCc-hh
Confidence             699999988                47899999999999987 69999999999999988888776432     33 48


Q ss_pred             hhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          211 HVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       211 ~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|..+|.++|.         |+++.|.|+.++|||+..
T Consensus       169 cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~  206 (350)
T KOG1429|consen  169 CYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMH  206 (350)
T ss_pred             hhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccc
Confidence            89999977765         699999999999999754

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.79  E-value=2.1e-18  Score=148.38  Aligned_cols=134  Identities=22%  Similarity=0.271  Sum_probs=120.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |+||||    |++|++|..|++.|. .+++|+.++|..                       ++..|++.+.+++...++|
T Consensus         1 M~iLi~----G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~~PD   52 (281)
T COG1091           1 MKILIT----GANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRETRPD   52 (281)
T ss_pred             CcEEEE----cCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhhCCC
Confidence            359999    999999999999998 779999999875                       2233899999999988899


Q ss_pred             EEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||+|+                +|..+..+++++|++.|. ++|++||..||......|+.|+|+..|. +.||.+|++
T Consensus        53 vVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~-nvYG~sKl~  130 (281)
T COG1091          53 VVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPL-NVYGRSKLA  130 (281)
T ss_pred             EEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCCh-hhhhHHHHH
Confidence            9999998                578899999999999998 8999999999999888899999999998 899999998


Q ss_pred             HHhC-----CcEEEEecCeeecCCC
Q 025587          219 SENF-----SNWASFRPQYMIGSGN  238 (250)
Q Consensus       219 ~e~~-----~~~~ilRp~~i~G~~~  238 (250)
                      .|..     -+..|+|.+.+||...
T Consensus       131 GE~~v~~~~~~~~I~Rtswv~g~~g  155 (281)
T COG1091         131 GEEAVRAAGPRHLILRTSWVYGEYG  155 (281)
T ss_pred             HHHHHHHhCCCEEEEEeeeeecCCC
Confidence            8874     5799999999999976

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.79  E-value=1.7e-18  Score=153.78  Aligned_cols=138  Identities=21%  Similarity=0.299  Sum_probs=103.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+||||++++++|+++|  ++|++++|+......+.+.       ....+++++.+|   .+.+.++
T Consensus         3 ~~k~vLVT----GatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~-------~~~~~~~~v~~Dl~d~~~l~~~   71 (324)
T TIGR03589         3 NNKSILIT----GGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQK-------FPAPCLRFFIGDVRDKERLTRA   71 (324)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHH-------hCCCcEEEEEccCCCHHHHHHH
Confidence            35799999    999999999999999986  8999999876432211110       111245555555   7888888


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      +++  +|+|||+||                .|+.++.++++++++.++++||++||...+              .|. +.
T Consensus        72 ~~~--iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--------------~p~-~~  134 (324)
T TIGR03589        72 LRG--VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--------------NPI-NL  134 (324)
T ss_pred             Hhc--CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC--------------CCC-CH
Confidence            876  899999998                256789999999999999999999995422              111 45


Q ss_pred             hHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          212 VQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       212 y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      |+.+|...|            .+++++++|||++|||+.
T Consensus       135 Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~  173 (324)
T TIGR03589       135 YGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG  173 (324)
T ss_pred             HHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC
Confidence            777765443            368999999999999864

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.77  E-value=2.2e-18  Score=161.09  Aligned_cols=160  Identities=17%  Similarity=0.191  Sum_probs=110.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC-ccc--c-hhcCCceEEeCC---HHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-RFN--E-IVSAGGKTVWGD---PAEV  144 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~-~~~--~-~~~~~v~~v~~D---~~~l  144 (250)
                      .++++||||    ||+|+||++++++|+++|++|++++|+.+....+.+.... .+.  . ....+++++.+|   .+++
T Consensus        78 ~~gKvVLVT----GATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         78 KDEDLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            356899999    9999999999999999999999999987655432110000 000  0 001235566665   7778


Q ss_pred             HhhhcCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCC
Q 025587          145 GNVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~  210 (250)
                      .+++++  +|+|||++|.              |+.++.++++++++.+++|||++||.+++...... ............
T Consensus       154 ~~aLgg--iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~-~~~~sk~~~~~~  230 (576)
T PLN03209        154 GPALGN--ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPA-AILNLFWGVLCW  230 (576)
T ss_pred             HHHhcC--CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccc-cchhhHHHHHHH
Confidence            888877  7999999983              45689999999999999999999998764211100 000000000013


Q ss_pred             hhHHHHHHHHhCCcEEEEecCeeecCCC
Q 025587          211 HVQVEKYISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       211 ~y~~~k~~~e~~~~~~ilRp~~i~G~~~  238 (250)
                      +..+++++.+.+++|++||||.++++.+
T Consensus       231 KraaE~~L~~sGIrvTIVRPG~L~tp~d  258 (576)
T PLN03209        231 KRKAEEALIASGLPYTIVRPGGMERPTD  258 (576)
T ss_pred             HHHHHHHHHHcCCCEEEEECCeecCCcc
Confidence            4456777888899999999999998754

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.77  E-value=7.2e-18  Score=148.08  Aligned_cols=147  Identities=17%  Similarity=0.307  Sum_probs=103.7

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC--Ccc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG--VTF  153 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~--~~~  153 (250)
                      ||||    ||+||||++++++|+++|+ +|++++|..... .+        ..+....+..+..|.+.+..+.+.  .++
T Consensus         1 ilIt----GatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   67 (314)
T TIGR02197         1 IIVT----GGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF--------LNLADLVIADYIDKEDFLDRLEKGAFGKI   67 (314)
T ss_pred             CEEe----CCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh--------hhhhheeeeccCcchhHHHHHHhhccCCC
Confidence            6999    9999999999999999997 788887764321 11        111110111122235555554431  359


Q ss_pred             cEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC-CCCChhHHHHHH
Q 025587          154 DVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-PDAGHVQVEKYI  218 (250)
Q Consensus       154 d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~-~~~~~y~~~k~~  218 (250)
                      |+|||+|+              .|+.++.+++++|++.++ +||++||.++|+.... ++.|+++.. +. +.|+.+|..
T Consensus        68 D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~-~~Y~~sK~~  144 (314)
T TIGR02197        68 EAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPL-NVYGYSKFL  144 (314)
T ss_pred             CEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCC-CHHHHHHHH
Confidence            99999997              367889999999999887 8999999999997644 566666543 43 678866643


Q ss_pred             HHh-----------CCcEEEEecCeeecCCCC
Q 025587          219 SEN-----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       219 ~e~-----------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|.           +++++++||+.+|||+..
T Consensus       145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~  176 (314)
T TIGR02197       145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPREY  176 (314)
T ss_pred             HHHHHHHHhHhhccCCceEEEEEeeccCCCCC
Confidence            331           368999999999999864

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=1.4e-17  Score=142.59  Aligned_cols=151  Identities=18%  Similarity=0.214  Sum_probs=108.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l  148 (250)
                      .+|+||||    ||+|+||++++++|+++||+|+++.|+.+.......         ...+++++.+|    .+.+.+.+
T Consensus        16 ~~~~ilIt----GasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~l~~~~   82 (251)
T PLN00141         16 KTKTVFVA----GATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---------QDPSLQIVRADVTEGSDKLVEAI   82 (251)
T ss_pred             cCCeEEEE----CCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---------cCCceEEEEeeCCCCHHHHHHHh
Confidence            46899999    999999999999999999999999998754332110         01245666666    24555655


Q ss_pred             -cCCcccEEEeCCCc------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC-CCC----CC
Q 025587          149 -GGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV-KPD----AG  210 (250)
Q Consensus       149 -~~~~~d~Vi~~ag~------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~-~~~----~~  210 (250)
                       .+  +|+||+++|.            |..++.++++++++.++++||++||.++|+...+.+..+.... ++.    ..
T Consensus        83 ~~~--~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~  160 (251)
T PLN00141         83 GDD--SDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVA  160 (251)
T ss_pred             hcC--CCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHH
Confidence             34  8999999883            3457899999999999999999999999986433332221110 110    12


Q ss_pred             hhHHHHHHHHhCCcEEEEecCeeecCCC
Q 025587          211 HVQVEKYISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       211 ~y~~~k~~~e~~~~~~ilRp~~i~G~~~  238 (250)
                      +..+|+++.+.++++++|||+.+++...
T Consensus       161 k~~~e~~l~~~gi~~~iirpg~~~~~~~  188 (251)
T PLN00141        161 KLQAEKYIRKSGINYTIVRPGGLTNDPP  188 (251)
T ss_pred             HHHHHHHHHhcCCcEEEEECCCccCCCC
Confidence            3345666777789999999999998753

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.76  E-value=9.5e-18  Score=147.95  Aligned_cols=158  Identities=19%  Similarity=0.279  Sum_probs=115.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCcccc---CC-C-CCCCcccchhcCCceEEeCC--------
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDK---MK-K-PPFNRFNEIVSAGGKTVWGD--------  140 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~---~~-~-~~~~~~~~~~~~~v~~v~~D--------  140 (250)
                      ++||+|    |||||+|.+++.+|+.+- .+|+++.|..+.-..   +. . .....|++.....++.+.+|        
T Consensus         1 ~~vlLT----GATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL   76 (382)
T COG3320           1 RNVLLT----GATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGL   76 (382)
T ss_pred             CeEEEe----cCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCC
Confidence            479999    999999999999999985 599999997642111   11 0 11234455677788899888        


Q ss_pred             -HHHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCC----
Q 025587          141 -PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG----  202 (250)
Q Consensus       141 -~~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~----  202 (250)
                       ..++.++.+.  +|.|||+++             .|+.|+..+++.|...+.|.|+|+||++++.........+.    
T Consensus        77 ~~~~~~~La~~--vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~  154 (382)
T COG3320          77 SERTWQELAEN--VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI  154 (382)
T ss_pred             CHHHHHHHhhh--cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence             4566666655  899999998             58999999999999988899999999999876433222111    


Q ss_pred             CC---------CCCCCChhHHHHHHHHh---CCcEEEEecCeeecCCC
Q 025587          203 DV---------VKPDAGHVQVEKYISEN---FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~---------~~~~~~~y~~~k~~~e~---~~~~~ilRp~~i~G~~~  238 (250)
                      ++         ....++|+.+|+.+.+.   |++++|+|||+|.|...
T Consensus       155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence            11         11123455555544443   79999999999999976

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.76  E-value=2e-17  Score=143.62  Aligned_cols=142  Identities=25%  Similarity=0.352  Sum_probs=101.7

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcccEE
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d~V  156 (250)
                      ||||    ||+||||++++++|+++||+|++++|+.+..+.....           .+.  ..+.+.+.+.+.+  +|+|
T Consensus         1 vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~--~D~V   61 (292)
T TIGR01777         1 ILIT----GGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-----------GYK--PWAPLAESEALEG--ADAV   61 (292)
T ss_pred             CEEE----cccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-----------eee--cccccchhhhcCC--CCEE
Confidence            6999    9999999999999999999999999987654322100           111  1111334455555  8999


Q ss_pred             EeCCCc------------------CHHhHHHHHHHHHhCCCC--EEEEEcCcccccCCCCCCccCCCCCCCCCChh----
Q 025587          157 LDNNGK------------------NLDAVRPVADWAKSSGVK--QFLFISSAGIYKPADEPPHVEGDVVKPDAGHV----  212 (250)
Q Consensus       157 i~~ag~------------------~~~~~~~ll~~~~~~~~~--~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y----  212 (250)
                      ||+++.                  |+.++.++++++++.+++  +||+.|+.++|+.....++.|+++..+. ..|    
T Consensus        62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~-~~~~~~~  140 (292)
T TIGR01777        62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD-DFLAELC  140 (292)
T ss_pred             EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC-ChHHHHH
Confidence            999972                  466799999999998863  5777777789998766678888754332 222    


Q ss_pred             -HHHHHH---HHhCCcEEEEecCeeecCCC
Q 025587          213 -QVEKYI---SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       213 -~~~k~~---~e~~~~~~ilRp~~i~G~~~  238 (250)
                       ..|+.+   .+.+++++++||+.+|||.+
T Consensus       141 ~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~  170 (292)
T TIGR01777       141 RDWEEAAQAAEDLGTRVVLLRTGIVLGPKG  170 (292)
T ss_pred             HHHHHHhhhchhcCCceEEEeeeeEECCCc
Confidence             223322   23469999999999999964

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.5e-17  Score=160.42  Aligned_cols=151  Identities=21%  Similarity=0.282  Sum_probs=106.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHH--hCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH---------HH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELL--GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---------AE  143 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll--~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~---------~~  143 (250)
                      |+||||    ||+||||++|+++|+  ++|++|++++|+.... .+...    .......+++.+.+|.         +.
T Consensus         1 m~ILVT----GatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~   71 (657)
T PRK07201          1 MRYFVT----GGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEAL----AAYWGADRVVPLVGDLTEPGLGLSEAD   71 (657)
T ss_pred             CeEEEe----CCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHHH----HHhcCCCcEEEEecccCCccCCcCHHH
Confidence            589999    999999999999999  5899999999964221 11000    0000113466666662         23


Q ss_pred             HHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC--CC
Q 025587          144 VGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK--PD  208 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~--~~  208 (250)
                      +.++ +  ++|+|||+|+             .|+.++.+++++|++.++++||++||..+|+.... +..|.+...  ..
T Consensus        72 ~~~l-~--~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~  147 (657)
T PRK07201         72 IAEL-G--DIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGL  147 (657)
T ss_pred             HHHh-c--CCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCC
Confidence            4443 4  4899999998             37889999999999999999999999999986543 344443211  11


Q ss_pred             CChhHHHHHHHH------hCCcEEEEecCeeecCCC
Q 025587          209 AGHVQVEKYISE------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       209 ~~~y~~~k~~~e------~~~~~~ilRp~~i~G~~~  238 (250)
                      ...|+.+|...|      .+++++++||+.|||+..
T Consensus       148 ~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~  183 (657)
T PRK07201        148 PTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSR  183 (657)
T ss_pred             CCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCC
Confidence            244665554444      368999999999999864

>PLN02996 fatty acyl-CoA reductase

Probab=99.75  E-value=1.1e-17  Score=156.46  Aligned_cols=163  Identities=17%  Similarity=0.217  Sum_probs=114.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCcccc-------CCCC-CCC--------cccchhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDK-------MKKP-PFN--------RFNEIVSA  132 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~-------~~~~-~~~--------~~~~~~~~  132 (250)
                      -.+|+||||    |||||+|++|+++|++.+   .+|+++.|..+....       +.+. .+.        .+.+....
T Consensus         9 ~~~k~VlvT----GaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996          9 LENKTILVT----GATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             hCCCeEEEe----CCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            357899999    999999999999999865   468999997643221       1110 010        01111125


Q ss_pred             CceEEeCCH----------HHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhC-CCCEEEEEcCc
Q 025587          133 GGKTVWGDP----------AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSS-GVKQFLFISSA  188 (250)
Q Consensus       133 ~v~~v~~D~----------~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~  188 (250)
                      .++++.+|.          +.+.+++++  +|+|||+|+             .|+.++.+++++|++. ++++||++||.
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~--vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~  162 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWKE--IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA  162 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHhC--CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence            678888883          225566665  899999998             4789999999999985 78999999999


Q ss_pred             ccccCCCC----CCccCCCC----------------------------------------------CCCCCChhHHHHHH
Q 025587          189 GIYKPADE----PPHVEGDV----------------------------------------------VKPDAGHVQVEKYI  218 (250)
Q Consensus       189 ~vy~~~~~----~~~~e~~~----------------------------------------------~~~~~~~y~~~k~~  218 (250)
                      .+||...+    .++.+...                                              .....+.|+.+|.+
T Consensus       163 ~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~  242 (491)
T PLN02996        163 YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM  242 (491)
T ss_pred             EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence            99987431    12211000                                              00012458888887


Q ss_pred             HHh-------CCcEEEEecCeeecCCCCC
Q 025587          219 SEN-------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       219 ~e~-------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +|.       +++++++||++|||+++.+
T Consensus       243 aE~lv~~~~~~lpv~i~RP~~V~G~~~~p  271 (491)
T PLN02996        243 GEMLLGNFKENLPLVIIRPTMITSTYKEP  271 (491)
T ss_pred             HHHHHHHhcCCCCEEEECCCEeccCCcCC
Confidence            776       5899999999999998755

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.75  E-value=2.7e-18  Score=147.03  Aligned_cols=152  Identities=18%  Similarity=0.254  Sum_probs=88.5

Q ss_pred             EEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccc---cCCCC-CCCccc-ch---hcCCceEEeCC--------
Q 025587           79 IVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSD---KMKKP-PFNRFN-EI---VSAGGKTVWGD--------  140 (250)
Q Consensus        79 Vt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~---~~~~~-~~~~~~-~~---~~~~v~~v~~D--------  140 (250)
                      ||    |||||+|.+|+++|++++.  +|+++.|..+...   .+.+. ....+. ..   ....++++.+|        
T Consensus         1 lT----GaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LT----GATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-----TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG-
T ss_pred             Cc----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCC
Confidence            79    9999999999999999987  8999999874311   11000 001111 11   25678999998        


Q ss_pred             -HHHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC------cc
Q 025587          141 -PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP------HV  200 (250)
Q Consensus       141 -~~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~------~~  200 (250)
                       .+++.++.+.  +|+|||+|+             .|+.+++++++.|.+.+.++|+|+||..+.+......      ..
T Consensus        77 ~~~~~~~L~~~--v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~  154 (249)
T PF07993_consen   77 SDEDYQELAEE--VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEE  154 (249)
T ss_dssp             -HHHHHHHHHH----EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred             ChHHhhccccc--cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccc
Confidence             3556665555  899999999             4899999999999987777999999955554433211      11


Q ss_pred             CC--CCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecC
Q 025587          201 EG--DVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~--~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~  236 (250)
                      +.  +........|..+|+++|.         +++++|+||+.|+|.
T Consensus       155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S
T ss_pred             cccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence            11  1111223567777766655         799999999999994

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.74  E-value=3e-17  Score=146.36  Aligned_cols=156  Identities=22%  Similarity=0.327  Sum_probs=108.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccc---cCCCC-CCCccc--chhcCCceEEeCC-------
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSD---KMKKP-PFNRFN--EIVSAGGKTVWGD-------  140 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~---~~~~~-~~~~~~--~~~~~~v~~v~~D-------  140 (250)
                      +||||    |||||||++++++|+++|  ++|+++.|+.+...   .+.+. ....+.  ......++++.+|       
T Consensus         1 ~vlvt----GatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~g   76 (367)
T TIGR01746         1 TVLLT----GATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLG   76 (367)
T ss_pred             CEEEe----ccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCC
Confidence            58999    999999999999999999  67999999865221   11000 000000  0001356777777       


Q ss_pred             --HHHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          141 --PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       141 --~~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                        .+.+.++.++  +|+|||+++             .|+.++.++++++.+.++++||++||.++|+.....+..|.++.
T Consensus        77 l~~~~~~~~~~~--~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~  154 (367)
T TIGR01746        77 LSDAEWERLAEN--VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI  154 (367)
T ss_pred             cCHHHHHHHHhh--CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence              2345555554  899999998             46789999999999999999999999999987443333333322


Q ss_pred             CC----CCChhHHHHHHHHh--------CCcEEEEecCeeecCC
Q 025587          206 KP----DAGHVQVEKYISEN--------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       206 ~~----~~~~y~~~k~~~e~--------~~~~~ilRp~~i~G~~  237 (250)
                      ..    ....|+.+|+..|.        +++++++|||.+||+.
T Consensus       155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~  198 (367)
T TIGR01746       155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNS  198 (367)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecC
Confidence            11    12457766654443        7999999999999973

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.74  E-value=6.2e-18  Score=146.30  Aligned_cols=140  Identities=23%  Similarity=0.362  Sum_probs=99.1

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce----EEeCC---HHHHHhhh
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK----TVWGD---PAEVGNVV  148 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~----~v~~D---~~~l~~~l  148 (250)
                      ||||    ||+|.||+.|+++|++.+ .++++++|++.+...+...-...   ....++.    .+.+|   .+.+..++
T Consensus         1 VLVT----Ga~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~---~~~~~v~~~~~~vigDvrd~~~l~~~~   73 (293)
T PF02719_consen    1 VLVT----GAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR---FPDPKVRFEIVPVIGDVRDKERLNRIF   73 (293)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH---C--TTCEEEEE--CTSCCHHHHHHHHT
T ss_pred             CEEE----ccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc---ccccCcccccCceeecccCHHHHHHHH
Confidence            7999    999999999999999998 68999999976554432220000   0112232    34555   88999999


Q ss_pred             cCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChh
Q 025587          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y  212 (250)
                      +..++|+|+|.|+                .|+.|+.|++++|.++++++||++||.....              |. +.|
T Consensus        74 ~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~--------------Pt-nvm  138 (293)
T PF02719_consen   74 EEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN--------------PT-NVM  138 (293)
T ss_dssp             T--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-----------------SHH
T ss_pred             hhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC--------------CC-cHH
Confidence            9778999999999                4899999999999999999999999955332              22 779


Q ss_pred             HHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          213 QVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       213 ~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                      |++|.++|.            ..+++++|+|+|.|...
T Consensus       139 GatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G  176 (293)
T PF02719_consen  139 GATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG  176 (293)
T ss_dssp             HHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT
T ss_pred             HHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC
Confidence            999988887            15799999999999753

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.73  E-value=5.7e-17  Score=142.52  Aligned_cols=134  Identities=20%  Similarity=0.181  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +.|+||||    ||+||||++|+++|+++|++|+...+..                          .|.+.+...+...+
T Consensus         8 ~~~kiLVt----G~tGfiG~~l~~~L~~~g~~V~~~~~~~--------------------------~~~~~v~~~l~~~~   57 (298)
T PLN02778          8 ATLKFLIY----GKTGWIGGLLGKLCQEQGIDFHYGSGRL--------------------------ENRASLEADIDAVK   57 (298)
T ss_pred             CCCeEEEE----CCCCHHHHHHHHHHHhCCCEEEEecCcc--------------------------CCHHHHHHHHHhcC
Confidence            45799999    9999999999999999999997542211                          14445566666556


Q ss_pred             ccEEEeCCCc-------------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC------CCCccCCCCCCC
Q 025587          153 FDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD------EPPHVEGDVVKP  207 (250)
Q Consensus       153 ~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~------~~~~~e~~~~~~  207 (250)
                      +|+|||+|+.                   |+.++.+++++|++.+++ ++++||.++|+...      ..+++|++++.+
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~  136 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNF  136 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCC
Confidence            8999999982                   466899999999999985 56678788886532      224677776654


Q ss_pred             CCChhHHHHHHHHhC----CcEEEEecCeeecCC
Q 025587          208 DAGHVQVEKYISENF----SNWASFRPQYMIGSG  237 (250)
Q Consensus       208 ~~~~y~~~k~~~e~~----~~~~ilRp~~i~G~~  237 (250)
                      ..+.|+.+|.+.|..    -+..++|+...+|++
T Consensus       137 ~~s~Yg~sK~~~E~~~~~y~~~~~lr~~~~~~~~  170 (298)
T PLN02778        137 TGSFYSKTKAMVEELLKNYENVCTLRVRMPISSD  170 (298)
T ss_pred             CCCchHHHHHHHHHHHHHhhccEEeeecccCCcc
Confidence            447899999888873    367889998878765

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.73  E-value=2.5e-17  Score=139.66  Aligned_cols=155  Identities=21%  Similarity=0.249  Sum_probs=123.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      .++||||    ||+||||++.+..+...  .++.+.++.-.  .....+...       ...++.+++.+|   ...+..
T Consensus         6 ~~~vlIt----gg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-------~n~p~ykfv~~di~~~~~~~~   74 (331)
T KOG0747|consen    6 EKNVLIT----GGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-------RNSPNYKFVEGDIADADLVLY   74 (331)
T ss_pred             cceEEEe----cCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-------ccCCCceEeeccccchHHHHh
Confidence            3899999    99999999999999987  57777776422  112211111       123466777776   566666


Q ss_pred             hhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccccCCCCCCcc-CCCCCCCC
Q 025587          147 VVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV-EGDVVKPD  208 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~~~~~~~-e~~~~~~~  208 (250)
                      ++...++|.|+|+|+                .|+.++..++++++.. ++++||++||..|||+.++.... |.+.+.|.
T Consensus        75 ~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt  154 (331)
T KOG0747|consen   75 LFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT  154 (331)
T ss_pred             hhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC
Confidence            777678999999998                4788999999999997 69999999999999998776655 88888887


Q ss_pred             CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          209 AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       209 ~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                       ..|++.|+++|.         +++++++|.++||||++-+
T Consensus       155 -npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~  194 (331)
T KOG0747|consen  155 -NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP  194 (331)
T ss_pred             -CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcCh
Confidence             899999998887         4899999999999999765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.73  E-value=2.8e-17  Score=151.19  Aligned_cols=146  Identities=23%  Similarity=0.328  Sum_probs=115.2

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      -..+|+||||    ||+|-||+.+++++++.+ .++++++|++-+...+.++--.+++   ...+..+.+|   .+.+.+
T Consensus       247 ~~~gK~vLVT----GagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---~~~~~~~igdVrD~~~~~~  319 (588)
T COG1086         247 MLTGKTVLVT----GGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---ELKLRFYIGDVRDRDRVER  319 (588)
T ss_pred             HcCCCEEEEe----CCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---CcceEEEecccccHHHHHH
Confidence            3457999999    999999999999999997 6788899988665544322111111   2345566665   899999


Q ss_pred             hhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCC
Q 025587          147 VVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~  210 (250)
                      ++++.++|+|+|.|+                .|+.||.|++++|.++|+++||++||...              ++|. +
T Consensus       320 ~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA--------------V~Pt-N  384 (588)
T COG1086         320 AMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA--------------VNPT-N  384 (588)
T ss_pred             HHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc--------------cCCc-h
Confidence            999999999999999                48999999999999999999999999442              2333 6


Q ss_pred             hhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          211 HVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       211 ~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                      .||++|.++|.            +.+++++|+|+|.|.+.
T Consensus       385 vmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG  424 (588)
T COG1086         385 VMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG  424 (588)
T ss_pred             HhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC
Confidence            68888877765            15799999999999964

>PRK05865 hypothetical protein; Provisional

Probab=99.71  E-value=1.4e-16  Score=155.66  Aligned_cols=122  Identities=24%  Similarity=0.349  Sum_probs=102.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~  151 (250)
                      |+|+||    ||+||||++++++|+++||+|++++|......              ..+++++.+   |.+++.+++++ 
T Consensus         1 MkILVT----GATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------------~~~v~~v~gDL~D~~~l~~al~~-   61 (854)
T PRK05865          1 MRIAVT----GASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------------PSSADFIAADIRDATAVESAMTG-   61 (854)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------------ccCceEEEeeCCCHHHHHHHHhC-
Confidence            579999    99999999999999999999999998752210              013444444   47888888876 


Q ss_pred             cccEEEeCCC-------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCc
Q 025587          152 TFDVVLDNNG-------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (250)
Q Consensus       152 ~~d~Vi~~ag-------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~  224 (250)
                       +|+|||+|+       .|+.++.+++++|++.++++||++||..                     +..+|+++.+.+++
T Consensus        62 -vD~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------K~aaE~ll~~~gl~  119 (854)
T PRK05865         62 -ADVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------QPRVEQMLADCGLE  119 (854)
T ss_pred             -CCEEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------HHHHHHHHHHcCCC
Confidence             899999998       3678999999999999999999999953                     46788888888999


Q ss_pred             EEEEecCeeecCC
Q 025587          225 WASFRPQYMIGSG  237 (250)
Q Consensus       225 ~~ilRp~~i~G~~  237 (250)
                      ++++||+++|||+
T Consensus       120 ~vILRp~~VYGP~  132 (854)
T PRK05865        120 WVAVRCALIFGRN  132 (854)
T ss_pred             EEEEEeceEeCCC
Confidence            9999999999996

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.69  E-value=3.3e-16  Score=140.79  Aligned_cols=158  Identities=18%  Similarity=0.230  Sum_probs=108.9

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVG  149 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~  149 (250)
                      ..+.++|||+    ||||.+|+.+++.|+++|+.|+++.|+.+...++....+   .+....+++..... .+.+..+..
T Consensus        76 ~~~~~~VlVv----GatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~---~d~~~~~v~~~~~~~~d~~~~~~~  148 (411)
T KOG1203|consen   76 SKKPTTVLVV----GATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFF---VDLGLQNVEADVVTAIDILKKLVE  148 (411)
T ss_pred             CCCCCeEEEe----cCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccc---cccccceeeeccccccchhhhhhh
Confidence            4456799999    999999999999999999999999999877766543100   11111222222111 233333332


Q ss_pred             CC--cccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          150 GV--TFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       150 ~~--~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                      ..  ...+|+.++|             +++++++|++++|+.+|++|||++|+++.-......+.... ......+++.+
T Consensus       149 ~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~-~~~~~~~k~~~  227 (411)
T KOG1203|consen  149 AVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL-NGLVLKAKLKA  227 (411)
T ss_pred             hccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh-hhhhhHHHHhH
Confidence            21  1346666655             57899999999999999999999999876554433322221 11222367889


Q ss_pred             HHHHHHhCCcEEEEecCeeecC
Q 025587          215 EKYISENFSNWASFRPQYMIGS  236 (250)
Q Consensus       215 ~k~~~e~~~~~~ilRp~~i~G~  236 (250)
                      ++++++.+++++||||+...-.
T Consensus       228 e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  228 EKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHHHHhcCCCcEEEeccccccC
Confidence            9999999999999999987654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.9e-16  Score=135.07  Aligned_cols=140  Identities=24%  Similarity=0.231  Sum_probs=99.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      .|+||||    ||+|+||++++++|+++|++|+++.|+.+..+.+.+.        ...++.++.+|   .+++.++++.
T Consensus         2 ~k~vlVt----Gasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~   69 (276)
T PRK06482          2 SKTWFIT----GASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR--------YGDRLWVLQLDVTDSAAVRAVVDR   69 (276)
T ss_pred             CCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------ccCceEEEEccCCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999987554432211        11234444454   6666665542


Q ss_pred             -----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           .++|+|||++|                    .|+.++.++++++    ++.+.++||++||.+.+...       
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  142 (276)
T PRK06482         70 AFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY-------  142 (276)
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCC-------
Confidence                 24899999998                    2567788888886    55677899999997543221       


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCee---ecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYM---IGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i---~G~~  237 (250)
                           +....|+.+|...+            .+++++++|||.+   ||++
T Consensus       143 -----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        143 -----PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence                 11256887774433            2689999999988   6554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.68  E-value=5.6e-16  Score=134.84  Aligned_cols=133  Identities=19%  Similarity=0.230  Sum_probs=101.5

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC----C
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG----V  151 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~----~  151 (250)
                      +||||    ||||++|++++++|+++|++|++++|++++...   .        ....+..++.|++.+.++++.    .
T Consensus         1 ~ilVt----GatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---~--------~~~~~~~d~~d~~~l~~a~~~~~~~~   65 (285)
T TIGR03649         1 TILLT----GGTGKTASRIARLLQAASVPFLVASRSSSSSAG---P--------NEKHVKFDWLDEDTWDNPFSSDDGME   65 (285)
T ss_pred             CEEEE----cCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---C--------CCccccccCCCHHHHHHHHhcccCcC
Confidence            48999    999999999999999999999999999864321   0        011233455679999998842    2


Q ss_pred             c-ccEEEeCCCc---CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh-CCcEE
Q 025587          152 T-FDVVLDNNGK---NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN-FSNWA  226 (250)
Q Consensus       152 ~-~d~Vi~~ag~---~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~-~~~~~  226 (250)
                      . +|.|+++++.   ......+++++|+++|++|||++|+.+++...              ..+...++++.+. +++|+
T Consensus        66 g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--------------~~~~~~~~~l~~~~gi~~t  131 (285)
T TIGR03649        66 PEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG--------------PAMGQVHAHLDSLGGVEYT  131 (285)
T ss_pred             CceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC--------------chHHHHHHHHHhccCCCEE
Confidence            3 7999999873   24678899999999999999999987654211              0223467788886 99999


Q ss_pred             EEecCeeecCC
Q 025587          227 SFRPQYMIGSG  237 (250)
Q Consensus       227 ilRp~~i~G~~  237 (250)
                      ++||+.+|+..
T Consensus       132 ilRp~~f~~~~  142 (285)
T TIGR03649       132 VLRPTWFMENF  142 (285)
T ss_pred             EEeccHHhhhh
Confidence            99999888653

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK12320 hypothetical protein; Provisional

Probab=99.67  E-value=1e-15  Score=147.00  Aligned_cols=128  Identities=18%  Similarity=0.269  Sum_probs=98.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--HHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~~~l~~~l~~~~  152 (250)
                      |+||||    ||+||||++|+++|+++||+|++++|.....              ...+++++.+|  ...+.+++.+  
T Consensus         1 MkILVT----GAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------~~~~ve~v~~Dl~d~~l~~al~~--   60 (699)
T PRK12320          1 MQILVT----DATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------LDPRVDYVCASLRNPVLQELAGE--   60 (699)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------ccCCceEEEccCCCHHHHHHhcC--
Confidence            489999    9999999999999999999999999865321              11245566666  2246666665  


Q ss_pred             ccEEEeCCC--------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCc
Q 025587          153 FDVVLDNNG--------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (250)
Q Consensus       153 ~d~Vi~~ag--------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~  224 (250)
                      +|+|||+++        .|+.++.+++++|++.|+ ++|++||.  ||...              .....|.++.+.+++
T Consensus        61 ~D~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~~~aE~ll~~~~~p  123 (699)
T PRK12320         61 ADAVIHLAPVDTSAPGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LYRQAETLVSTGWAP  123 (699)
T ss_pred             CCEEEEcCccCccchhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------cccHHHHHHHhcCCC
Confidence            799999998        467889999999999997 79999985  33211              012367777777799


Q ss_pred             EEEEecCeeecCCCC
Q 025587          225 WASFRPQYMIGSGNN  239 (250)
Q Consensus       225 ~~ilRp~~i~G~~~~  239 (250)
                      ++++|++++||++..
T Consensus       124 ~~ILR~~nVYGp~~~  138 (699)
T PRK12320        124 SLVIRIAPPVGRQLD  138 (699)
T ss_pred             EEEEeCceecCCCCc
Confidence            999999999999654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-15  Score=132.56  Aligned_cols=139  Identities=21%  Similarity=0.236  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.           ..+++++.+|   .+++.++++
T Consensus         3 ~~k~vlIt----GasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-----------~~~~~~~~~Dl~d~~~~~~~~~   67 (277)
T PRK05993          3 MKRSILIT----GCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-----------AEGLEAFQLDYAEPESIAALVA   67 (277)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCceEEEccCCCHHHHHHHHH
Confidence            46789999    99999999999999999999999999876544322           1234444454   666665554


Q ss_pred             C------CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G------VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~------~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .      ..+|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+.+..    
T Consensus        68 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----  143 (277)
T PRK05993         68 QVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMK----  143 (277)
T ss_pred             HHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCC----
Confidence            2      258999999982                    3333    67788888888888999999975443211    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|+.+|...+            .++++++++||.+-.+..
T Consensus       144 --------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~  186 (277)
T PRK05993        144 --------YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFR  186 (277)
T ss_pred             --------ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence                    1256887774433            369999999999987753

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.1e-15  Score=132.49  Aligned_cols=141  Identities=18%  Similarity=0.130  Sum_probs=98.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+....+.+.        ....+..+.+   |.+.+.+++++
T Consensus         4 ~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~d~~~~~~~~~~   71 (277)
T PRK06180          4 MKTWLIT----GVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--------HPDRALARLLDVTDFDAIDAVVAD   71 (277)
T ss_pred             CCEEEEe----cCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--------cCCCeeEEEccCCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999987654432211        1122333444   46666666653


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.++.+++++    +++.+.++||++||...+.....     
T Consensus        72 ~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~-----  146 (277)
T PRK06180         72 AEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG-----  146 (277)
T ss_pred             HHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC-----
Confidence                 148999999982                    45566666666    44556779999999765543211     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+..|...+            .+++++++|||.+.++..
T Consensus       147 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~  188 (277)
T PRK06180        147 -------IGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA  188 (277)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence                   255777664322            279999999999988753

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.66  E-value=9.6e-16  Score=129.99  Aligned_cols=141  Identities=18%  Similarity=0.209  Sum_probs=106.7

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcccEE
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVV  156 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d~V  156 (250)
                      |+||    ||||+||++|+.+|.+.||+|++++|++........           ..++    ..+.+.+.... .+|+|
T Consensus         1 IliT----GgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~----~~~~~~~~~~~-~~Dav   60 (297)
T COG1090           1 ILIT----GGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT----LWEGLADALTL-GIDAV   60 (297)
T ss_pred             CeEe----ccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc----ccchhhhcccC-CCCEE
Confidence            6899    999999999999999999999999999865442111           1111    22333444332 48999


Q ss_pred             EeCCCc------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCCCCCCCC---CChhH
Q 025587          157 LDNNGK------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPD---AGHVQ  213 (250)
Q Consensus       157 i~~ag~------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~---~~~y~  213 (250)
                      ||+||.                  -+..|..++++..+  .+.+.+|.-|.++.||+..+..++|+++...+   .-.+.
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~  140 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQD  140 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHH
Confidence            999992                  36679999999884  56778999999999999999999999776543   12455


Q ss_pred             HHHHHHH---hCCcEEEEecCeeecCC
Q 025587          214 VEKYISE---NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       214 ~~k~~~e---~~~~~~ilRp~~i~G~~  237 (250)
                      .|+....   .+.+++++|.|.|.++.
T Consensus       141 WE~~a~~a~~~gtRvvllRtGvVLs~~  167 (297)
T COG1090         141 WEEEALQAQQLGTRVVLLRTGVVLSPD  167 (297)
T ss_pred             HHHHHhhhhhcCceEEEEEEEEEecCC
Confidence            6665443   37899999999999975

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.65  E-value=2.9e-15  Score=129.13  Aligned_cols=137  Identities=20%  Similarity=0.180  Sum_probs=98.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE---EeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT---VWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~---v~~D~~~l~~~l~~  150 (250)
                      +++|+||    ||+|+||++++++|+++|++|++++|+.+.....             .++++   +..|++++.++++.
T Consensus         4 ~~~vlVt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~   66 (270)
T PRK06179          4 SKVALVT----GASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-------------PGVELLELDVTDDASVQAAVDE   66 (270)
T ss_pred             CCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-------------CCCeeEEeecCCHHHHHHHHHH
Confidence            4689999    9999999999999999999999999987544321             12333   44457777777753


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.++.++++    .+++.+.++||++||...+.....     
T Consensus        67 ~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  141 (270)
T PRK06179         67 VIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY-----  141 (270)
T ss_pred             HHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC-----
Confidence                 258999999993                    3334444444    466778899999999765543211     


Q ss_pred             CCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|+..|..            .+.++++++++||.+.++...
T Consensus       142 -------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~  184 (270)
T PRK06179        142 -------MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDA  184 (270)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccc
Confidence                   2457766543            234799999999999888643

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=3.6e-15  Score=126.73  Aligned_cols=172  Identities=19%  Similarity=0.163  Sum_probs=130.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+.|||    |-||+-|.+|++.|+++||+|+.+.|.......-. .............++++.+|   ...+.++++
T Consensus         1 ~~K~ALIT----GITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~r-i~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~   75 (345)
T COG1089           1 MGKVALIT----GITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPR-IHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE   75 (345)
T ss_pred             CCceEEEe----cccCCchHHHHHHHHhcCcEEEEEeeccccCCccc-ceeccccccCCceeEEEeccccchHHHHHHHH
Confidence            46899999    99999999999999999999999999753322110 00011111223346667776   778888888


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCC--CEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~--~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      ..++|-|+|+++                ++-.|+.+++++.+-.+.  .||...||...||...+.|.+|..|..|. ++
T Consensus        76 ~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr-SP  154 (345)
T COG1089          76 EVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-SP  154 (345)
T ss_pred             hcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC-CH
Confidence            888999999998                467789999999998664  58999999999999999999999999986 99


Q ss_pred             hHHHHHHHHhC-----CcEEEEecCeeecCCCCCCccccceecC
Q 025587          212 VQVEKYISENF-----SNWASFRPQYMIGSGNNKDCEEWFFDRK  250 (250)
Q Consensus       212 y~~~k~~~e~~-----~~~~ilRp~~i~G~~~~~~~~~~~~~~~  250 (250)
                      |++.|..+-.-     -.|-++-...|.=.++.+.+.+-|..||
T Consensus       155 YAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRK  198 (345)
T COG1089         155 YAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRK  198 (345)
T ss_pred             HHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHH
Confidence            99999766541     1244444455555667777777777664

>PRK06182 short chain dehydrogenase; Validated

Probab=99.64  E-value=2.3e-15  Score=130.06  Aligned_cols=138  Identities=21%  Similarity=0.165  Sum_probs=99.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe---CCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~---~D~~~l~~~l~~  150 (250)
                      +++|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.           ..+++++.   .|.+++.++++.
T Consensus         3 ~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-----------~~~~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          3 KKVALVT----GASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-----------SLGVHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHHHHHH
Confidence            5799999    99999999999999999999999999876544321           12344444   457777776652


Q ss_pred             -----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.+    ++.+++.+++.+.++||++||.+.+....      
T Consensus        68 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~------  141 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTP------  141 (273)
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCC------
Confidence                 258999999983                    2333    56677778777788999999965332211      


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                            ....|+.+|...+            .+++++++|||.+.++..
T Consensus       142 ------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        142 ------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             ------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence                  1134676664333            269999999999998853

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=1.6e-15  Score=128.14  Aligned_cols=147  Identities=18%  Similarity=0.165  Sum_probs=99.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++.|+.+.. +.+.+.    + .....++.++.+|   ++++.+++
T Consensus         5 ~~~~vlIt----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~D~~~~~~v~~~~   75 (249)
T PRK12825          5 MGRVALVT----GAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEA----V-EALGRRAQAVQADVTDKAALEAAV   75 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH----H-HhcCCceEEEECCcCCHHHHHHHH
Confidence            35799999    9999999999999999999998888775421 111000    0 0012235555565   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ++     ..+|+|||++|.                    |+.+..++++.+    ++.+.++||++||...+.....   
T Consensus        76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~---  152 (249)
T PRK12825         76 AAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG---  152 (249)
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC---
Confidence            43     258999999982                    344455555554    5677899999999877644221   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~~  240 (250)
                               ...|+..|..            .+.+++++++|||.++|+....
T Consensus       153 ---------~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (249)
T PRK12825        153 ---------RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA  196 (249)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence                     2446655522            2247999999999999997654

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.64  E-value=1.3e-15  Score=130.43  Aligned_cols=148  Identities=18%  Similarity=0.172  Sum_probs=111.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++++++||    ||+++||..++++|+++||+|+++.|+.++++.+.++-    .+.....+.++..|   ++++.++.
T Consensus         4 ~~~~~~lIT----GASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l----~~~~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           4 MKGKTALIT----GASSGIGAELAKQLARRGYNLILVARREDKLEALAKEL----EDKTGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHH----HHhhCceEEEEECcCCChhHHHHHH
Confidence            456899999    99999999999999999999999999998887665431    11122335566666   55555554


Q ss_pred             c---C--CcccEEEeCCCc--------------------C----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 G---G--VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~---~--~~~d~Vi~~ag~--------------------~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .   .  ..+|++|||||.                    |    ...++.+++.+.+.+-++||.++|...|-+...   
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~---  152 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY---  152 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc---
Confidence            3   2  369999999992                    2    334788888888888899999999887765432   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               .+.|+++|...-            .|+.++.+.||.+..+..+
T Consensus       153 ---------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         153 ---------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence                     378998883322            2699999999999888653

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.63  E-value=2.3e-15  Score=128.77  Aligned_cols=145  Identities=15%  Similarity=0.170  Sum_probs=99.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++||||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +.. ....+.++.+|   .+.+.++++
T Consensus         6 ~~~~vlIt----Gasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~~   76 (262)
T PRK13394          6 NGKTAVVT----GAASGIGKEIALELARAGAAVAIADLNQDGANAVADE----INK-AGGKAIGVAMDVTNEDAVNAGID   76 (262)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH----HHh-cCceEEEEECCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544322111    000 11234455555   666666554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHH-HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWA-KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~-~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||++|.                    |+.+    +..+++++ ++.+.++||++||...+.....   
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~---  153 (262)
T PRK13394         77 KVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL---  153 (262)
T ss_pred             HHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC---
Confidence            3     248999999982                    3444    67778888 6677899999999654432111   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|...            ..+++++++|||.++++..
T Consensus       154 ---------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~  195 (262)
T PRK13394        154 ---------KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLV  195 (262)
T ss_pred             ---------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhh
Confidence                     13355444322            2369999999999999863

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.63  E-value=2.4e-15  Score=128.28  Aligned_cols=144  Identities=17%  Similarity=0.152  Sum_probs=99.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++.
T Consensus         4 ~~~vlIt----G~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          4 GKVALVT----GAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEA----LQ-KAGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4799999    9999999999999999999999999987654432111    00 012234455555   6666666652


Q ss_pred             -----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.+    ++.+++.+++.+.++||++||...+.+...     
T Consensus        75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-----  149 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG-----  149 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC-----
Confidence                 258999999982                    3444    666777777778899999999765533221     


Q ss_pred             CCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+..|...            +.+++++++|||.++++..
T Consensus       150 -------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~  191 (258)
T PRK12429        150 -------KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV  191 (258)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence                   13354444222            1368999999999999864

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.63  E-value=5.3e-15  Score=140.40  Aligned_cols=117  Identities=16%  Similarity=0.262  Sum_probs=84.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC---eEEEEEcCCCccc-------cCCC-CCCCccc--------chhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSD-------KMKK-PPFNRFN--------EIVSAG  133 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~---~V~~l~R~~~~~~-------~~~~-~~~~~~~--------~~~~~~  133 (250)
                      .+++||||    |||||+|.+|+++|++.+.   +|+++.|..+...       ++.+ .-|.++.        ......
T Consensus       118 ~~k~VlVT----GaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K  193 (605)
T PLN02503        118 RGKNFLIT----GATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK  193 (605)
T ss_pred             cCCEEEEc----CCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence            46899999    9999999999999998764   6899999754321       1111 1111111        111235


Q ss_pred             ceEEeCC---H------HHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhC-CCCEEEEEcCccc
Q 025587          134 GKTVWGD---P------AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSS-GVKQFLFISSAGI  190 (250)
Q Consensus       134 v~~v~~D---~------~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~v  190 (250)
                      +..+.+|   +      ++.+.+.++  +|+|||+|+             .|+.++.+++++|++. ++++||++||+.+
T Consensus       194 i~~v~GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayV  271 (605)
T PLN02503        194 LVPVVGNVCESNLGLEPDLADEIAKE--VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYV  271 (605)
T ss_pred             EEEEEeeCCCcccCCCHHHHHHHHhc--CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCcee
Confidence            6777777   2      344444444  899999998             4788999999999886 5789999999999


Q ss_pred             ccCCC
Q 025587          191 YKPAD  195 (250)
Q Consensus       191 y~~~~  195 (250)
                      |+...
T Consensus       272 yG~~~  276 (605)
T PLN02503        272 NGQRQ  276 (605)
T ss_pred             ecCCC
Confidence            99753

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.62  E-value=4.9e-15  Score=143.55  Aligned_cols=134  Identities=20%  Similarity=0.193  Sum_probs=103.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +.|+||||    ||+||||++|+++|.++|++|.... .                     +    ..|.+.+.+.+...+
T Consensus       379 ~~mkiLVt----Ga~G~iG~~l~~~L~~~g~~v~~~~-~---------------------~----l~d~~~v~~~i~~~~  428 (668)
T PLN02260        379 PSLKFLIY----GRTGWIGGLLGKLCEKQGIAYEYGK-G---------------------R----LEDRSSLLADIRNVK  428 (668)
T ss_pred             CCceEEEE----CCCchHHHHHHHHHHhCCCeEEeec-c---------------------c----cccHHHHHHHHHhhC
Confidence            45799999    9999999999999999999984211 0                     1    126677777887767


Q ss_pred             ccEEEeCCC-------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC------CCCCccCCCCCCC
Q 025587          153 FDVVLDNNG-------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------DEPPHVEGDVVKP  207 (250)
Q Consensus       153 ~d~Vi~~ag-------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~------~~~~~~e~~~~~~  207 (250)
                      +|+|||+|+                   .|+.++.+++++|++.|+ ++|++||.++|+..      ...|+.|++.+.+
T Consensus       429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~  507 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNF  507 (668)
T ss_pred             CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCC
Confidence            999999997                   256789999999999998 46788888888642      2347888876665


Q ss_pred             CCChhHHHHHHHHhC----CcEEEEecCeeecCC
Q 025587          208 DAGHVQVEKYISENF----SNWASFRPQYMIGSG  237 (250)
Q Consensus       208 ~~~~y~~~k~~~e~~----~~~~ilRp~~i~G~~  237 (250)
                      ..+.|+.+|...|..    -++.++|...+||.+
T Consensus       508 ~~~~Yg~sK~~~E~~~~~~~~~~~~r~~~~~~~~  541 (668)
T PLN02260        508 TGSFYSKTKAMVEELLREYDNVCTLRVRMPISSD  541 (668)
T ss_pred             CCChhhHHHHHHHHHHHhhhhheEEEEEEecccC
Confidence            457899999888763    367788888888653

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.5e-15  Score=128.53  Aligned_cols=142  Identities=18%  Similarity=0.102  Sum_probs=99.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+..+.+   |.+++.++++
T Consensus         2 ~~k~vlIt----Gasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   69 (275)
T PRK08263          2 MEKVWFIT----GASRGFGRAWTEAALERGDRVVATARDTATLADLAEK--------YGDRLLPLALDVTDRAAVFAAVE   69 (275)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------ccCCeeEEEccCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987554322111        1122334444   4666666554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHH----HHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~----~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.++.    .+++.+++.+.+++|++||...+.+...    
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~----  145 (275)
T PRK08263         70 TAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM----  145 (275)
T ss_pred             HHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC----
Confidence            3     258999999982                    445544    4444456677889999999876654322    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...+            .+++++++|||.+.++..
T Consensus       146 --------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~  187 (275)
T PRK08263        146 --------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWA  187 (275)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcc
Confidence                    255777774422            369999999999987754

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.61  E-value=3.7e-15  Score=126.48  Aligned_cols=147  Identities=18%  Similarity=0.186  Sum_probs=99.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|++|++++++|+++|++|++++|+.+......+.    +. .....+.++.+|   .+++.++++
T Consensus         5 ~~~~ilIt----Gasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12826          5 EGRVALVT----GAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAEL----VE-AAGGKARARQVDVRDRAALKAAVA   75 (251)
T ss_pred             CCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEECCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999986433321110    00 011234455555   777777665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.     .+|+|||++|.                    |+.++.++++.+    ++.+.++||++||...+....     
T Consensus        76 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----  150 (251)
T PRK12826         76 AGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY-----  150 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC-----
Confidence            31     48999999972                    344555566555    456678999999987662111     


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                            +....|+..|..            ...+++++++|||.++|+...
T Consensus       151 ------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  195 (251)
T PRK12826        151 ------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAG  195 (251)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhh
Confidence                  112456666522            223689999999999999654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.60  E-value=9.3e-15  Score=122.97  Aligned_cols=143  Identities=18%  Similarity=0.172  Sum_probs=97.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.++.....+       ++....++   .+..|.+++.++++
T Consensus         6 ~~k~vlIt----Gatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~   74 (239)
T PRK12828          6 QGKVVAIT----GGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-------GVPADALRIGGIDLVDPQAARRAVD   74 (239)
T ss_pred             CCCEEEEE----CCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-------HHhhcCceEEEeecCCHHHHHHHHH
Confidence            35899999    999999999999999999999999997754322110       11111233   33445666666665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|.                    |+.++.++++++    ++.+.++||++||...|+....    
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  150 (239)
T PRK12828         75 EVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG----  150 (239)
T ss_pred             HHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC----
Confidence            3     158999999982                    334455555554    4567889999999887765321    


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|..            .+.+++++++|||.++++..
T Consensus       151 --------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~  192 (239)
T PRK12828        151 --------MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN  192 (239)
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch
Confidence                    1445555422            22369999999999999854

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.8e-15  Score=124.90  Aligned_cols=143  Identities=18%  Similarity=0.113  Sum_probs=95.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE---eCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV---WGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v---~~D~~~l~~~l~  149 (250)
                      |+++||||    ||+|+||++++++|+++|++|++++|+.+....+.+.     ......++.++   ..|++++.+++.
T Consensus         1 m~~~vlVt----Gasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~   71 (257)
T PRK09291          1 MSKTILIT----GAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE-----AARRGLALRVEKLDLTDAIDRAQAAE   71 (257)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----HHhcCCcceEEEeeCCCHHHHHHHhc
Confidence            35789999    9999999999999999999999999976443322110     00011234444   445778888776


Q ss_pred             CCcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          150 GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      + .+|+|||++|.                    |+.+    ++.+++.+++.+.++||++||...+.....         
T Consensus        72 ~-~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~---------  141 (257)
T PRK09291         72 W-DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF---------  141 (257)
T ss_pred             C-CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC---------
Confidence            4 48999999982                    2233    445566666777789999999754322111         


Q ss_pred             CCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          206 KPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                         ...|+.+|...+            .++++++||||.+..+.
T Consensus       142 ---~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~  182 (257)
T PRK09291        142 ---TGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGF  182 (257)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence               134665554332            47999999999875543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.59  E-value=3.4e-15  Score=126.26  Aligned_cols=140  Identities=21%  Similarity=0.350  Sum_probs=103.6

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCCcc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~~~  153 (250)
                      |+|+    ||||.+|+.+++.|++.|++|++++|+.++..         ...+...+++++.+|   ++.+.++|++  +
T Consensus         1 I~V~----GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~---------~~~l~~~g~~vv~~d~~~~~~l~~al~g--~   65 (233)
T PF05368_consen    1 ILVT----GATGNQGRSVVRALLSAGFSVRALVRDPSSDR---------AQQLQALGAEVVEADYDDPESLVAALKG--V   65 (233)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH---------HHHHHHTTTEEEES-TT-HHHHHHHHTT--C
T ss_pred             CEEE----CCccHHHHHHHHHHHhCCCCcEEEEeccchhh---------hhhhhcccceEeecccCCHHHHHHHHcC--C
Confidence            7999    99999999999999999999999999873211         112345677777776   8999999998  7


Q ss_pred             cEEEeCCCc----CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC-CCCChhHHHHHHHHhCCcEEEE
Q 025587          154 DVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK-PDAGHVQVEKYISENFSNWASF  228 (250)
Q Consensus       154 d~Vi~~ag~----~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~-~~~~~y~~~k~~~e~~~~~~il  228 (250)
                      |+||.+.+.    ......+++++|+++|+++||+.|-...+.....     ..+.. ....++.+|+++.+.+++|++|
T Consensus        66 d~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~-----~~p~~~~~~~k~~ie~~l~~~~i~~t~i  140 (233)
T PF05368_consen   66 DAVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSG-----SEPEIPHFDQKAEIEEYLRESGIPYTII  140 (233)
T ss_dssp             SEEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTT-----STTHHHHHHHHHHHHHHHHHCTSEBEEE
T ss_pred             ceEEeecCcchhhhhhhhhhHHHhhhccccceEEEEEeccccccccc-----ccccchhhhhhhhhhhhhhhccccceec
Confidence            999988773    3778999999999999999997554443321100     00000 0125577899999999999999


Q ss_pred             ecCeeecC
Q 025587          229 RPQYMIGS  236 (250)
Q Consensus       229 Rp~~i~G~  236 (250)
                      |||..+..
T Consensus       141 ~~g~f~e~  148 (233)
T PF05368_consen  141 RPGFFMEN  148 (233)
T ss_dssp             EE-EEHHH
T ss_pred             cccchhhh
Confidence            99987654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06196 oxidoreductase; Provisional

Probab=99.59  E-value=1.5e-14  Score=127.96  Aligned_cols=152  Identities=16%  Similarity=0.081  Sum_probs=100.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.       +  .++.++.+|   .+++.++++
T Consensus        25 ~~k~vlIT----GasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~-------l--~~v~~~~~Dl~d~~~v~~~~~   91 (315)
T PRK06196         25 SGKTAIVT----GGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG-------I--DGVEVVMLDLADLESVRAFAE   91 (315)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h--hhCeEEEccCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999987544322110       1  124445554   666666553


Q ss_pred             C-----CcccEEEeCCCc------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCC-CccC
Q 025587          150 G-----VTFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP-PHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~-~~~e  201 (250)
                      .     .++|+|||+||.                  |+.+    ++.+++.+++.+.++||++||.+.+...... ....
T Consensus        92 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  171 (315)
T PRK06196         92 RFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF  171 (315)
T ss_pred             HHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCc
Confidence            2     358999999982                  3334    5566666766666799999997643221100 0000


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ..+..+ ...|+.+|...+            .++++++++||.+.++..
T Consensus       172 ~~~~~~-~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~  219 (315)
T PRK06196        172 TRGYDK-WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ  219 (315)
T ss_pred             cCCCCh-HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence            111111 256887775432            269999999999999864

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.59  E-value=8.3e-15  Score=124.46  Aligned_cols=144  Identities=16%  Similarity=0.142  Sum_probs=99.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+....+.+.    +. ....++.++.+|   .+++.++++
T Consensus         2 ~~~~ilIt----Gas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~d~~~~~~~~~~~~   72 (250)
T TIGR03206         2 KDKTAIVT----GGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAAD----IR-AKGGNAQAFACDITDRDSVDTAVA   72 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322110    00 011234455555   666666654


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|                    .|+.+..++++++    ++.+.++||++||...|.....    
T Consensus        73 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~----  148 (250)
T TIGR03206        73 AAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG----  148 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC----
Confidence            2     24899999998                    2445555554444    4567789999999887754332    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ...|+..|...+            .+++++++|||.++++.
T Consensus       149 --------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       149 --------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence                    145776663221            26999999999999885

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.5e-14  Score=123.94  Aligned_cols=143  Identities=17%  Similarity=0.152  Sum_probs=97.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +..  ..++..+.+|   .+++.++++.
T Consensus         2 ~~~vlIt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~--~~~~~~~~~Dl~~~~~i~~~~~~   71 (257)
T PRK07024          2 PLKVFIT----GASSGIGQALAREYARQGATLGLVARRTDALQAFAAR----LPK--AARVSVYAADVRDADALAAAAAD   71 (257)
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccc--CCeeEEEEcCCCCHHHHHHHHHH
Confidence            5799999    9999999999999999999999999987554432211    000  0134455555   6666665542


Q ss_pred             -----CcccEEEeCCCc---------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          151 -----VTFDVVLDNNGK---------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 -----~~~d~Vi~~ag~---------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                           ..+|++||++|.                     |+.++..    +++.+++.+.++||++||...+.....    
T Consensus        72 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~----  147 (257)
T PRK07024         72 FIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG----  147 (257)
T ss_pred             HHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC----
Confidence                 248999999982                     2334444    445666777789999999654422111    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...            +.+++++++|||.+.++..
T Consensus       148 --------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  189 (257)
T PRK07024        148 --------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT  189 (257)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh
Confidence                    24577666422            2369999999999998853

>PRK09186 flagellin modification protein A; Provisional

Probab=99.59  E-value=8e-15  Score=125.09  Aligned_cols=155  Identities=18%  Similarity=0.102  Sum_probs=99.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+....   ......+.++.+   |++++.++++.
T Consensus         4 ~k~vlIt----Gas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (256)
T PRK09186          4 GKTILIT----GAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK---EFKSKKLSLVELDITDQESLEEFLSK   76 (256)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh---hcCCCceeEEEecCCCHHHHHHHHHH
Confidence            5899999    9999999999999999999999999987654322111000   001112333344   47777777653


Q ss_pred             C-----cccEEEeCCCc-----------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          151 V-----TFDVVLDNNGK-----------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       151 ~-----~~d~Vi~~ag~-----------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     .+|+|||+|+.                       |+    ..++.+++.+++.+.++||++||...+..... .
T Consensus        77 ~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~  155 (256)
T PRK09186         77 SAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-E  155 (256)
T ss_pred             HHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-h
Confidence            2     38999999951                       12    23556677777777789999999765433221 1


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      ..++.+.... ..|+.+|...+            .++++++++||.++++.
T Consensus       156 ~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        156 IYEGTSMTSP-VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             hccccccCCc-chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence            1222222221 35777774322            25899999999988653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.58  E-value=1.5e-14  Score=123.35  Aligned_cols=139  Identities=18%  Similarity=0.198  Sum_probs=95.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~-  150 (250)
                      |+|+||    ||+|+||.+++++|+++|++|++++|+++..+.+...        ...++..+.+|   .+++.++++. 
T Consensus         1 ~~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~i~~~~~~~   68 (248)
T PRK10538          1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELKDE--------LGDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_pred             CEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hccceEEEEecCCCHHHHHHHHHHH
Confidence            589999    9999999999999999999999999987554432111        12234445554   6666665542 


Q ss_pred             ----CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 ----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 ----~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                          ..+|+|||++|.                     |+.+    ++.++..+++.+.++||++||...+.....     
T Consensus        69 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  143 (248)
T PRK10538         69 PAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG-----  143 (248)
T ss_pred             HHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC-----
Confidence                248999999983                     2233    555666666677889999999764422111     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|...+.            ++++++++||.+.|+.
T Consensus       144 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        144 -------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence                   2457766643322            5899999999998664

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.2e-14  Score=123.68  Aligned_cols=144  Identities=15%  Similarity=0.117  Sum_probs=98.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|+++.|+.+..+.....    +.  ....+..+.+|   ++++.++++
T Consensus         4 ~~k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~   73 (252)
T PRK06138          4 AGRVAIVT----GAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA----IA--AGGRAFARQGDVGSAEAVEALVD   73 (252)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHH----Hh--cCCeEEEEEcCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322111    00  11234455555   677776665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|.                    |+.++    ..+++++++.+.++||++||...+.....    
T Consensus        74 ~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~----  149 (252)
T PRK06138         74 FVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG----  149 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC----
Confidence            3     258999999992                    23333    44556666777889999999754322111    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...+            .+++++++|||.++++..
T Consensus       150 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (252)
T PRK06138        150 --------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF  191 (252)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence                    144666663322            268999999999999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.3e-14  Score=123.89  Aligned_cols=142  Identities=19%  Similarity=0.163  Sum_probs=96.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+++..+.+.+       ++.  ...+..+..|   .+++..++
T Consensus         5 ~k~vlIt----Ga~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (258)
T PRK07890          5 GKVVVVS----GVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAA-------EIDDLGRRALAVPTDITDEDQCANLV   73 (258)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-------HHHHhCCceEEEecCCCCHHHHHHHH
Confidence            5899999    999999999999999999999999998754432211       111  1234445554   66666555


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHhHHHHHHHHHhC---CCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||++|.                     |+.+...+++++.+.   ..++||++||...+.+...   
T Consensus        74 ~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  150 (258)
T PRK07890         74 ALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPK---  150 (258)
T ss_pred             HHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCC---
Confidence            43     258999999982                     445566666666541   2358999999765433211   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|++.|...            +.+++++++|||.++++..
T Consensus       151 ---------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~  192 (258)
T PRK07890        151 ---------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL  192 (258)
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence                     13466555332            2369999999999999864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.9e-14  Score=121.98  Aligned_cols=151  Identities=16%  Similarity=0.136  Sum_probs=99.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|.........+.-...+. .....+.++.+|   .+.+.++++
T Consensus         5 ~~~~ilIt----Gasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          5 DSRRVLIT----GGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIE-AAGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999988743211100000000000 011234555555   666666653


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH-----hCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~-----~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|+|||++|.                    |+.++.++++++.     +.+.++||++||...+.....   
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  156 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG---  156 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC---
Confidence            2     258999999982                    4566778887776     456789999999876543221   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~~  240 (250)
                               ...|...|...            ..+++++++|||.++++....
T Consensus       157 ---------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        157 ---------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence                     13466555322            126999999999999987554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.58  E-value=2e-14  Score=121.33  Aligned_cols=145  Identities=18%  Similarity=0.190  Sum_probs=96.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++||||    ||+|+||.+++++|+++|++|++++|+++..+.+.+.    +. .....+.++.+|   ++++.+++++
T Consensus         5 ~~~ilIt----Gasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T PRK05653          5 GKTALVT----GASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAE----LR-AAGGEARVLVFDVSDEAAVRALIEA   75 (246)
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHHHH
Confidence            4789999    9999999999999999999999999987544322110    00 011234444455   6666666553


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.+..++++.+    ++.+.++||++||.........     
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~-----  150 (246)
T PRK05653         76 AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG-----  150 (246)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC-----
Confidence                 247999999972                    344555555555    4567789999999754322111     


Q ss_pred             CCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|...|..            .+.+++++++|||.++++...
T Consensus       151 -------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        151 -------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             -------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence                   1335544421            223689999999999998764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.7e-14  Score=120.91  Aligned_cols=145  Identities=16%  Similarity=0.141  Sum_probs=98.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||+.++++|+++|++|++++|+.+..+.+.+.    +.+ ...++.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   75 (241)
T PRK07454          5 SMPRALIT----GASSGIGKATALAFAKAGWDLALVARSQDALEALAAE----LRS-TGVKAAAYSIDLSNPEAIAPGIA   75 (241)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-CCCcEEEEEccCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987543322110    000 11235555565   666655554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.+.    +.+++.+++.+.++||++||...+++...    
T Consensus        76 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  151 (241)
T PRK07454         76 ELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ----  151 (241)
T ss_pred             HHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC----
Confidence            2     248999999982                    23333    34445555666789999999887754322    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...            ..+++++++|||.+-++..
T Consensus       152 --------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~  193 (241)
T PRK07454        152 --------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLW  193 (241)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcc
Confidence                    24576666432            2379999999999988763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.57  E-value=1.8e-14  Score=122.67  Aligned_cols=142  Identities=18%  Similarity=0.195  Sum_probs=93.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~-  150 (250)
                      ++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++. 
T Consensus         2 ~~vlIt----Ga~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (255)
T TIGR01963         2 KTALVT----GAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKV----AT-DAGGSVIYLVADVTKEDEIADMIAAA   72 (255)
T ss_pred             CEEEEc----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHHHHH
Confidence            689999    9999999999999999999999999987544322110    00 011235555555   6655544432 


Q ss_pred             ----CcccEEEeCCCc--------------------CHHhHHHH----HHHHHhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~~~~~l----l~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                          ..+|+|||+++.                    |+.++..+    ++.+++.+.++||++||...+.....      
T Consensus        73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~------  146 (255)
T TIGR01963        73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF------  146 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC------
Confidence                248999999982                    33443444    44446677889999999765543221      


Q ss_pred             CCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                            ...|...|..            ...+++++++||+.++++.
T Consensus       147 ------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~  187 (255)
T TIGR01963       147 ------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL  187 (255)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence                  1334444421            1237899999999999985

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=2.1e-14  Score=121.94  Aligned_cols=144  Identities=17%  Similarity=0.238  Sum_probs=99.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +..  ..++.++.+|   ++++.++++
T Consensus         4 ~~~~vlIt----Gasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~--~~~~~~~~~D~~~~~~~~~~~~   73 (251)
T PRK07231          4 EGKVAIVT----GASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAE----ILA--GGRAIAVAADVSDEADVEAAVA   73 (251)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----Hhc--CCeEEEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987554432111    000  1234455555   777776664


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     .+|+|||++|.                     |+.+    ++.+++.+++.+.++||++||...+.+...   
T Consensus        74 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  150 (251)
T PRK07231         74 AALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG---  150 (251)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC---
Confidence            32     58999999983                     2233    455555665667889999999877654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|...            ..+++++.++||.+.++..
T Consensus       151 ---------~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~  192 (251)
T PRK07231        151 ---------LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLL  192 (251)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcc
Confidence                     14466555222            2268999999999977653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.3e-14  Score=125.58  Aligned_cols=145  Identities=17%  Similarity=0.119  Sum_probs=94.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHh---
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGN---  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~---  146 (250)
                      ++++|||    ||+|++|++++++|+++|++|++++|+.+..+.+.+..    ... ....+.++.+|   ++++.+   
T Consensus         3 ~k~~lIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~d~~~~~~~~~   74 (280)
T PRK06914          3 KKIAIVT----GASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQA----TQLNLQQNIKVQQLDVTDQNSIHNFQL   74 (280)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHH----HhcCCCCceeEEecCCCCHHHHHHHHH
Confidence            4789999    99999999999999999999999999875443321110    000 01235555555   555544   


Q ss_pred             hhcC-CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          147 VVGG-VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       147 ~l~~-~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.+. .++|+|||++|.                    |+.++.++++.    +++.+.++||++||...+.....     
T Consensus        75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-----  149 (280)
T PRK06914         75 VLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG-----  149 (280)
T ss_pred             HHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC-----
Confidence            2221 258999999982                    34455555555    56677789999999643322111     


Q ss_pred             CCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+..|..            .+.+++++++|||.++++..
T Consensus       150 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~  191 (280)
T PRK06914        150 -------LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIW  191 (280)
T ss_pred             -------CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchh
Confidence                   1335544422            23379999999999998853

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.3e-14  Score=121.85  Aligned_cols=142  Identities=20%  Similarity=0.172  Sum_probs=96.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|++|||    ||+|+||++++++|+++|++|++++|+.+..+++...       +....+.++.+|   .+++.+++++
T Consensus         1 mk~vlIt----Gasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~v~~~~~~   69 (260)
T PRK08267          1 MKSIFIT----GAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAE-------LGAGNAWTGALDVTDRAAWDAALAD   69 (260)
T ss_pred             CcEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH-------hcCCceEEEEecCCCHHHHHHHHHH
Confidence            4789999    9999999999999999999999999987654433211       111234455554   6666665542


Q ss_pred             ------CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcc-cccCCCCCCc
Q 025587          151 ------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAG-IYKPADEPPH  199 (250)
Q Consensus       151 ------~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~-vy~~~~~~~~  199 (250)
                            .++|+|||++|.                    |+.++..+++++    ++.+.++||++||.. +|+...    
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  145 (260)
T PRK08267         70 FAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG----  145 (260)
T ss_pred             HHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC----
Confidence                  358999999982                    445555555544    455667999999974 333221    


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+.+|...            +.++++++++||.+..+...
T Consensus       146 ---------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~  188 (260)
T PRK08267        146 ---------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLD  188 (260)
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccc
Confidence                     13466555432            22699999999999776533

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.57  E-value=1.3e-14  Score=124.06  Aligned_cols=146  Identities=17%  Similarity=0.194  Sum_probs=98.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +.. ....+..+.+   |.+++.++++
T Consensus         9 ~~k~vlIt----Ga~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----i~~-~~~~~~~~~~D~~~~~~~~~~~~   79 (255)
T PRK07523          9 TGRRALVT----GSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAES----LKG-QGLSAHALAFDVTDHDAVRAAID   79 (255)
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHh-cCceEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    000 0112334444   4677777665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.++.++++++.+    .+.++||++||...+.+..     
T Consensus        80 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-----  154 (255)
T PRK07523         80 AFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP-----  154 (255)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC-----
Confidence            3     248999999982                    34556666666553    4678999999965433211     


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ....|+..|...            +.+++++++|||.+.++...
T Consensus       155 -------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~  198 (255)
T PRK07523        155 -------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNA  198 (255)
T ss_pred             -------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhh
Confidence                   124567666322            33799999999999998643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.57  E-value=2e-14  Score=123.10  Aligned_cols=141  Identities=15%  Similarity=0.086  Sum_probs=94.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.. .....+.    +.. ....+..+.+   |.+++.++++
T Consensus         7 ~~k~vlVt----Gas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK12823          7 AGKVVVVT----GAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAE----LRA-AGGEALALTADLETYAGAQAAMA   76 (260)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHH----HHh-cCCeEEEEEEeCCCHHHHHHHHH
Confidence            45899999    99999999999999999999999999742 1111000    000 0122333444   4666665554


Q ss_pred             C-----CcccEEEeCCCc---------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|+|||+||.                     |+    ..++.+++.+++.+.++||++||...|+..     
T Consensus        77 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----  151 (260)
T PRK12823         77 AAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN-----  151 (260)
T ss_pred             HHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC-----
Confidence            2     258999999972                     12    234566777777777899999998766421     


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|++.|...+            .++++++++||.++++.
T Consensus       152 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        152 ---------RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence                     134666663322            26999999999999974

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.56  E-value=2.2e-14  Score=122.83  Aligned_cols=143  Identities=22%  Similarity=0.215  Sum_probs=94.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +.++||||    ||+|+||++++++|+++|++|++++|+++..+.+.+.       .....+.++.+|   ++.+.++++
T Consensus        10 ~~~~vlIt----Ga~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~   78 (264)
T PRK12829         10 DGLRVLVT----GGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR-------LPGAKVTATVADVADPAQVERVFD   78 (264)
T ss_pred             CCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HhcCceEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986544322111       111123444444   666666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCC-CEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~-~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     .++|+|||++|.                     |+.++.++++++    ++.+. ++|+++||...+.....  
T Consensus        79 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~--  156 (264)
T PRK12829         79 TAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG--  156 (264)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC--
Confidence            3     258999999983                     234555555554    44444 67888887543221111  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+..|...+            .+++++++|||.++|++.
T Consensus       157 ----------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~  198 (264)
T PRK12829        157 ----------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM  198 (264)
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence                      133655553222            268999999999999864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.56  E-value=1e-13  Score=117.11  Aligned_cols=138  Identities=17%  Similarity=0.143  Sum_probs=99.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      +.++|+||    ||+|+||++++++|+++|+ +|++++|+.+..++            ...++.++.+   |.+++.+++
T Consensus         5 ~~~~vlIt----Ggsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~   68 (238)
T PRK08264          5 KGKVVLVT----GANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------LGPRVVPLQLDVTDPASVAAAA   68 (238)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------cCCceEEEEecCCCHHHHHHHH
Confidence            35789999    9999999999999999998 99999998754432            1123444444   477777777


Q ss_pred             cCC-cccEEEeCCCc---------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          149 GGV-TFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       149 ~~~-~~d~Vi~~ag~---------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      +.. .+|+|||++|.                     |+.+..++++++.    +.+.++||++||...+.+...      
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~------  142 (238)
T PRK08264         69 EAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN------  142 (238)
T ss_pred             HhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC------
Confidence            643 48999999984                     3455666666643    456789999999876654222      


Q ss_pred             CCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                            ...|+..|...+            .+++++++|||.+.++..
T Consensus       143 ------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        143 ------LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             ------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence                  245766653332            268999999999988753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=3.2e-14  Score=121.33  Aligned_cols=146  Identities=16%  Similarity=0.186  Sum_probs=96.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|..+. .....+.    +. .....+.++.+|   ++++.+++
T Consensus         1 ~~k~vlIt----G~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   71 (256)
T PRK12745          1 MRPVALVT----GGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQE----LR-ALGVEVIFFPADVADLSAHEAML   71 (256)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHH----HH-hcCCceEEEEecCCCHHHHHHHH
Confidence            35789999    999999999999999999999999987532 1111000    00 011234455555   66666555


Q ss_pred             cC-----CcccEEEeCCCc----------------------CHHhHHHHHHHHHh----C-C-----CCEEEEEcCcccc
Q 025587          149 GG-----VTFDVVLDNNGK----------------------NLDAVRPVADWAKS----S-G-----VKQFLFISSAGIY  191 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~~----~-~-----~~~~v~iSS~~vy  191 (250)
                      +.     ..+|+|||++|.                      |+.++.++++++.+    . +     .++||++||...+
T Consensus        72 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  151 (256)
T PRK12745         72 DAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI  151 (256)
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc
Confidence            42     258999999982                      44556666666543    1 1     5689999997755


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                      .+...            ...|+.+|...            ..+++++++|||.++++...
T Consensus       152 ~~~~~------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  199 (256)
T PRK12745        152 MVSPN------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA  199 (256)
T ss_pred             cCCCC------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence            43221            14466555432            23689999999999998654

>PRK05717 oxidoreductase; Validated

Probab=99.56  E-value=3.9e-14  Score=121.18  Aligned_cols=142  Identities=16%  Similarity=0.152  Sum_probs=97.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+.++.+|   .+++.++++
T Consensus         9 ~~k~vlIt----G~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~   76 (255)
T PRK05717          9 NGRVALVT----GAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA--------LGENAWFIAMDVADEAQVAAGVA   76 (255)
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH--------cCCceEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999876443322111        11234455555   555544443


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||++|.                      |+.++.++++++.+   ...+++|++||...+.....   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~---  153 (255)
T PRK05717         77 EVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD---  153 (255)
T ss_pred             HHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC---
Confidence            2     148999999982                      45577788888753   22368999999765433221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|...+.           ++++++++||.+.++..
T Consensus       154 ---------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        154 ---------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDP  194 (255)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcc
Confidence                     2457777744332           38899999999999753

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.55  E-value=6.2e-14  Score=121.24  Aligned_cols=138  Identities=22%  Similarity=0.132  Sum_probs=93.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE---eCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV---WGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v---~~D~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.           ..++..+   ..|.+++.++++.
T Consensus         1 mk~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~   65 (274)
T PRK05693          1 MPVVLIT----GCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-----------AAGFTAVQLDVNDGAALARLAEE   65 (274)
T ss_pred             CCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCCCeEEEeeCCCHHHHHHHHHH
Confidence            3689999    99999999999999999999999999875443221           1233333   3456677666542


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                           .++|+|||++|.                    |+.++.++++++..   .+.+++|++||...+....       
T Consensus        66 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  138 (274)
T PRK05693         66 LEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP-------  138 (274)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC-------
Confidence                 258999999982                    34455555555422   2446899999965432211       


Q ss_pred             CCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          203 DVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                           ....|+..|...            ..++++++++||.+.++..
T Consensus       139 -----~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~  181 (274)
T PRK05693        139 -----FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFA  181 (274)
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccc
Confidence                 124577666322            2379999999999987753

>PRK06194 hypothetical protein; Provisional

Probab=99.55  E-value=4.2e-14  Score=122.93  Aligned_cols=141  Identities=17%  Similarity=0.131  Sum_probs=95.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~l  148 (250)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+..+...+       ++.  ...+.++.+|   .+++.+++
T Consensus         6 ~k~vlVt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~D~~d~~~~~~~~   74 (287)
T PRK06194          6 GKVAVIT----GAASGFGLAFARIGAALGMKLVLADVQQDALDRAVA-------ELRAQGAEVLGVRTDVSDAAQVEALA   74 (287)
T ss_pred             CCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-------HHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            5789999    999999999999999999999999997654332211       111  1234445555   67777766


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCC------CEEEEEcCcccccC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGV------KQFLFISSAGIYKP  193 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~------~~~v~iSS~~vy~~  193 (250)
                      +.     ..+|+|||+||.                    |+.++.+++++    +++.+.      +++|++||...+.+
T Consensus        75 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  154 (287)
T PRK06194         75 DAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA  154 (287)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC
Confidence            53     148999999982                    34445544444    555443      58999999876654


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHHh--------------CCcEEEEecCeeecCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISEN--------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e~--------------~~~~~ilRp~~i~G~~  237 (250)
                      ...            ...|++.|...+.              +++++.+.||.+..+.
T Consensus       155 ~~~------------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        155 PPA------------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             CCC------------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence            321            2457777744332              3678889999886553

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.55  E-value=3.5e-14  Score=121.09  Aligned_cols=142  Identities=21%  Similarity=0.165  Sum_probs=96.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      +++|+||    ||+|+||++++++|+++|++|+++ .|+.+..+...+       .+.  ...+.++.+|   ++++.++
T Consensus         6 ~~~ilIt----Gasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~D~~d~~~i~~~   74 (254)
T PRK12746          6 GKVALVT----GASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIR-------EIESNGGKAFLIEADLNSIDGVKKL   74 (254)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-------HHHhcCCcEEEEEcCcCCHHHHHHH
Confidence            4799999    999999999999999999999876 565543322110       011  1234445554   6777666


Q ss_pred             hcC-----------CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCC
Q 025587          148 VGG-----------VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       148 l~~-----------~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~  194 (250)
                      ++.           ..+|+|||++|                    .|+.++.++++++.+  .+.++||++||..++.+.
T Consensus        75 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~  154 (254)
T PRK12746         75 VEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF  154 (254)
T ss_pred             HHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC
Confidence            652           25899999998                    256677777777665  234689999998877543


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                      ..            ...|+..|...            +.++++++++||.++++..
T Consensus       155 ~~------------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  198 (254)
T PRK12746        155 TG------------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN  198 (254)
T ss_pred             CC------------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence            22            13466555332            2368999999999998854

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=2.9e-14  Score=121.24  Aligned_cols=144  Identities=16%  Similarity=0.156  Sum_probs=94.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++||||    ||+|+||++++++|+++|++|+++ .|+.+..+.+.+.    +. .....+.++.+|   ++++.++++
T Consensus         4 ~~~vlIt----Ga~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   74 (250)
T PRK08063          4 GKVALVT----GSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEE----IE-ALGRKALAVKANVGDVEKIKEMFA   74 (250)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCeEEEEEcCCCCHHHHHHHHH
Confidence            4789999    999999999999999999998874 6665433221110    00 011234455555   777777665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     .+|+|||++|.                    |+.++..+++++    ++.+.++||++||...+.....    
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----  150 (250)
T PRK08063         75 QIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN----  150 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC----
Confidence            32     58999999982                    344444555444    4456679999999765432211    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...            +.++++++++||.+.++..
T Consensus       151 --------~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~  192 (250)
T PRK08063        151 --------YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDAL  192 (250)
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchh
Confidence                    14466666433            2368999999999987753

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.5e-14  Score=122.61  Aligned_cols=143  Identities=20%  Similarity=0.173  Sum_probs=98.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+...+       ++.  ...+..+.+|   .+++.++
T Consensus         5 ~~k~vlVT----Gas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~-------~l~~~~~~~~~~~~Dv~d~~~v~~~   73 (275)
T PRK05876          5 PGRGAVIT----GGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVN-------HLRAEGFDVHGVMCDVRHREEVTHL   73 (275)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            46789999    999999999999999999999999998754432211       111  1123444454   6666666


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|+|||+||.                    |+.+..++++++    .+.+ .++||++||...+.+... 
T Consensus        74 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~-  152 (275)
T PRK05876         74 ADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG-  152 (275)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC-
Confidence            543     258999999982                    444555555554    3444 578999999876643221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                                 ...|+..|...            ..++++++++||.+.++..
T Consensus       153 -----------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  194 (275)
T PRK05876        153 -----------LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLV  194 (275)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccc
Confidence                       25677777431            2269999999999998853

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.55  E-value=2.8e-14  Score=122.12  Aligned_cols=141  Identities=16%  Similarity=0.131  Sum_probs=97.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      +.++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+..+.+   |.+++.++++
T Consensus         5 ~~~~vlIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   72 (257)
T PRK07067          5 QGKVALLT----GAASGIGEAVAERYLAEGARVVIADIKPARARLAALE--------IGPAAIAVSLDVTRQDSIDRIVA   72 (257)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987654432211        1122444444   4666666665


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC----C-CCEEEEEcCccc-ccCCCCCC
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS----G-VKQFLFISSAGI-YKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~----~-~~~~v~iSS~~v-y~~~~~~~  198 (250)
                      .     ..+|+|||++|                    .|+.+..++++++...    + .++||++||... ++..    
T Consensus        73 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  148 (257)
T PRK07067         73 AAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA----  148 (257)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC----
Confidence            3     25899999998                    3566777777776542    1 358999999642 2211    


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ....|++.|...            ..++++++++||.++++..
T Consensus       149 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~  191 (257)
T PRK07067        149 ---------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMW  191 (257)
T ss_pred             ---------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhh
Confidence                     124566666321            2369999999999999853

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4.7e-14  Score=121.91  Aligned_cols=146  Identities=20%  Similarity=0.215  Sum_probs=97.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D---~~~l~~~l  148 (250)
                      +.|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.... ...+.++.+|   ++++.+++
T Consensus         6 ~~k~vlIt----Gasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (276)
T PRK05875          6 QDRTYLVT----GGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEE----IEALKGAGAVRYEPADVTDEDQVARAV   77 (276)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HHhccCCCceEEEEcCCCCHHHHHHHH
Confidence            35899999    9999999999999999999999999986543322110    00000 1234444454   66676666


Q ss_pred             cCC-----cccEEEeCCCc---------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     .+|+|||++|.                     |+.+...+++++.+    .+.++||++||...+.....  
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--  155 (276)
T PRK05875         78 DAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRW--  155 (276)
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCC--
Confidence            532     58999999972                     34455555554433    45569999999876643211  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+..|...+.            +++++++|||.+.++..
T Consensus       156 ----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~  197 (276)
T PRK05875        156 ----------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV  197 (276)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccc
Confidence                      2557777744433            58999999999987754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.54  E-value=7.5e-14  Score=118.50  Aligned_cols=141  Identities=16%  Similarity=0.089  Sum_probs=97.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE---EeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT---VWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~---v~~D~~~l~~~l~~  150 (250)
                      +++|+||    ||+|+||++++++|+++|++|++++|+++..+.+.+.         ..++..   +..|.+++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~   67 (240)
T PRK06101          1 MTAVLIT----GATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------SANIFTLAFDVTDHPGTKAALSQ   67 (240)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------cCCCeEEEeeCCCHHHHHHHHHh
Confidence            3689999    9999999999999999999999999987554433211         112333   44458888887765


Q ss_pred             C--cccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          151 V--TFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       151 ~--~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      .  .+|.+|+++|                    .|+.++.++++++...  +.+++|++||.....+..           
T Consensus        68 ~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----------  136 (240)
T PRK06101         68 LPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP-----------  136 (240)
T ss_pred             cccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC-----------
Confidence            2  4789999987                    2456677888777652  345899998854221111           


Q ss_pred             CCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          207 PDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 ~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                       ....|+..|...            +.+++++++|||.++++..+
T Consensus       137 -~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        137 -RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             -CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence             123466666322            33789999999999998654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.54  E-value=6.7e-14  Score=124.02  Aligned_cols=154  Identities=18%  Similarity=0.202  Sum_probs=96.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|+||    ||+|+||.+++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   .+++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~~~   75 (322)
T PRK07453          5 AKGTVIIT----GASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQE----LG-IPPDSYTIIHIDLGDLDSVRRFVD   75 (322)
T ss_pred             CCCEEEEE----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----hh-ccCCceEEEEecCCCHHHHHHHHH
Confidence            46799999    9999999999999999999999999987554322111    00 011234444444   666666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhCC--CCEEEEEcCcccccCCC--
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSSG--VKQFLFISSAGIYKPAD--  195 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~--~~~~v~iSS~~vy~~~~--  195 (250)
                      .     .++|+|||+||+                     |+.++.+++++    +++.+  .+|||++||...+....  
T Consensus        76 ~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~  155 (322)
T PRK07453         76 DFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGG  155 (322)
T ss_pred             HHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCC
Confidence            3     248999999982                     33344444444    44433  35999999976543210  


Q ss_pred             CC--C--cc------------------CCCCCCCCCChhHHHHHHHH-------------hCCcEEEEecCeeecC
Q 025587          196 EP--P--HV------------------EGDVVKPDAGHVQVEKYISE-------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       196 ~~--~--~~------------------e~~~~~~~~~~y~~~k~~~e-------------~~~~~~ilRp~~i~G~  236 (250)
                      ..  +  .+                  +..+..+ ...|+.+|.+.+             .+++++.+|||.|++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKP-GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             ccCCCCccchhhhhcchhcccccccccCccCCCc-cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            00  0  00                  1111222 256888885332             2589999999999864

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.54  E-value=5e-14  Score=122.06  Aligned_cols=142  Identities=17%  Similarity=0.176  Sum_probs=95.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|+++.|+.+..+.+...    +. .....+.++.+|   .+++.++++.
T Consensus        10 ~~~vlVt----Ga~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (274)
T PRK07775         10 RRPALVA----GASSGIGAATAIELAAAGFPVALGARRVEKCEELVDK----IR-ADGGEAVAFPLDVTDPDSVKSFVAQ   80 (274)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEECCCCCHHHHHHHHHH
Confidence            4789999    9999999999999999999999999876443321100    00 011234444555   6777666653


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.++.++++.+.    +.+.++||++||...|.....     
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~-----  155 (274)
T PRK07775         81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH-----  155 (274)
T ss_pred             HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC-----
Confidence                 248999999982                    3455555655543    445678999999877654321     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~  236 (250)
                             ...|+..|...+            .+++++++|||.+.++
T Consensus       156 -------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~  195 (274)
T PRK07775        156 -------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG  195 (274)
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence                   244666664332            2689999999988655

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.54  E-value=6.6e-14  Score=145.31  Aligned_cols=161  Identities=18%  Similarity=0.260  Sum_probs=110.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEEcCCCccccCCCCC-----CCcccchhcCCceEEeCC---
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPP-----FNRFNEIVSAGGKTVWGD---  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~R~~~~~~~~~~~~-----~~~~~~~~~~~v~~v~~D---  140 (250)
                      ..++||||    ||+||+|.+++++|+++|    ++|+++.|..+.........     ...+.......++++.+|   
T Consensus       970 ~~~~VlvT----GatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443       970 TPITVFLT----GATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred             CCceEEEe----CCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence            35799999    999999999999999887    89999999754322110000     000000112246677776   


Q ss_pred             ------HHHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC------
Q 025587          141 ------PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD------  195 (250)
Q Consensus       141 ------~~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~------  195 (250)
                            .+.+.++..+  +|+|||+|+             .|+.++.+++++|++.++++|+|+||.++|+...      
T Consensus      1046 ~~lgl~~~~~~~l~~~--~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443      1046 EKFGLSDEKWSDLTNE--VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSD 1123 (1389)
T ss_pred             ccCCcCHHHHHHHHhc--CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhh
Confidence                  3445555554  899999998             3788999999999998999999999999996421      


Q ss_pred             ------CCCccCCCCCCC----CCChhHHHHHHHHh--------CCcEEEEecCeeecCCCC
Q 025587          196 ------EPPHVEGDVVKP----DAGHVQVEKYISEN--------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ------~~~~~e~~~~~~----~~~~y~~~k~~~e~--------~~~~~ilRp~~i~G~~~~  239 (250)
                            ...+.|.+....    ....|+.+|+.+|.        +++++++||+.|||+...
T Consensus      1124 ~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443      1124 ELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred             hhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCc
Confidence                  112333322111    12458877766554        689999999999999654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=5.9e-14  Score=118.73  Aligned_cols=145  Identities=19%  Similarity=0.166  Sum_probs=96.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|+||    ||+|+||.+++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   ++++.++++
T Consensus         6 ~~~~vlVt----G~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          6 QGKNALIT----GAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEE----VE-AYGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-HhCCeEEEEECCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987543322111    00 012235555565   667766665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.++.++++++    ++.+.+++|++||...+.....    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~----  152 (239)
T PRK07666         77 QLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV----  152 (239)
T ss_pred             HHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC----
Confidence            2     258999999983                    234444455444    3556789999999765543221    


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|..            .+.+++++++|||.+.++..
T Consensus       153 --------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~  194 (239)
T PRK07666        153 --------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA  194 (239)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch
Confidence                    1335555432            22379999999999988853

>PRK09135 pteridine reductase; Provisional

Probab=99.54  E-value=3.1e-14  Score=120.60  Aligned_cols=147  Identities=19%  Similarity=0.192  Sum_probs=97.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +.++||||    ||+|+||++++++|+++|++|++++|+.+. .+.+.+.    +.......+.++.+|   .+.+.+++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~   76 (249)
T PRK09135          5 SAKVALIT----GGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAE----LNALRPGSAAALQADLLDPDALPELV   76 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHhhcCCceEEEEcCCCCHHHHHHHH
Confidence            34789999    999999999999999999999999987532 2211100    001111234555555   66666666


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.     ..+|+|||++|                    .|+.++.++++++.+   ...++++.+++....         
T Consensus        77 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------  147 (249)
T PRK09135         77 AACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE---------  147 (249)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc---------
Confidence            53     24899999998                    356778888888864   123456666653211         


Q ss_pred             CCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~  239 (250)
                        .+..+ ...|+..|...+.           +++++++|||.++|+...
T Consensus       148 --~~~~~-~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        148 --RPLKG-YPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             --CCCCC-chhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc
Confidence              11122 2567777754432           488999999999999864

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.54  E-value=2.4e-13  Score=114.45  Aligned_cols=135  Identities=18%  Similarity=0.128  Sum_probs=95.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc----
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG----  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~----  149 (250)
                      .|+||||    ||+|+||++++++|+++|++|++++|+.+...             ...-+..+..|.+++.++++    
T Consensus         3 ~k~vlIt----G~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~   65 (234)
T PRK07577          3 SRTVLVT----GATKGIGLALSLRLANLGHQVIGIARSAIDDF-------------PGELFACDLADIEQTAATLAQINE   65 (234)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCccccc-------------CceEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999    99999999999999999999999999874311             00112344455666655554    


Q ss_pred             CCcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          150 GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      ...+|+|||++|.                    |+.+    ...+++.+++.+.++||++||...|+...          
T Consensus        66 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  135 (234)
T PRK07577         66 IHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD----------  135 (234)
T ss_pred             hCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC----------
Confidence            2358999999983                    1222    44556666667788999999987664321          


Q ss_pred             CCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          206 KPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       206 ~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                         ...|+..|...            +.+++++++|||.+.++..
T Consensus       136 ---~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~  177 (234)
T PRK07577        136 ---RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELF  177 (234)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccc
Confidence               14577666332            2379999999999988753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.53  E-value=7.9e-14  Score=119.44  Aligned_cols=145  Identities=21%  Similarity=0.260  Sum_probs=97.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+ +..+.+.+.    +. .....+.++.+|   .+++.+++
T Consensus        13 l~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935         13 LDGKVAIVT----GGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRL----IE-KEGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             CCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHH
Confidence            456899999    999999999999999999999999987 332221110    00 011234555555   66666665


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     .+|++||++|.                    |+.+    ++.+++.+++.+.+++|++||...+.+...   
T Consensus        83 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  159 (258)
T PRK06935         83 KEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF---  159 (258)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC---
Confidence            421     48999999982                    3334    444455565666789999999876644322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|++.|...+            .++++++|+||.+..+..
T Consensus       160 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~  201 (258)
T PRK06935        160 ---------VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANT  201 (258)
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccch
Confidence                     134666664332            269999999999988753

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.1e-14  Score=118.80  Aligned_cols=143  Identities=16%  Similarity=0.165  Sum_probs=96.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|..+..+.+.+.    +.. ....+..+.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~~   75 (250)
T PRK07774          5 DDKVAIVT----GAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQ----IVA-DGGTAIAVQVDVSDPDSAKAMAD   75 (250)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999986543322110    000 01123344444   666655554


Q ss_pred             C-----CcccEEEeCCCc-----------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK-----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-----------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      .     ..+|+|||++|.                       |+.++.++++++.+    .+.++||++||...|...   
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  152 (250)
T PRK07774         76 ATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---  152 (250)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---
Confidence            2     148999999983                       34556666666554    356799999998876421   


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                                  +.|+.+|...+.            ++++++++||.+.++...
T Consensus       153 ------------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  194 (250)
T PRK07774        153 ------------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR  194 (250)
T ss_pred             ------------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc
Confidence                        346655543322            588999999999888754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.53  E-value=6.1e-14  Score=117.52  Aligned_cols=144  Identities=17%  Similarity=0.141  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc---
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG---  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~---  149 (250)
                      ..|.|+||    ||+++||.+++++|.+.|++|++..|+.+.++.++++--.    -...-..++..|.+++.++++   
T Consensus         5 ~~kv~lIT----GASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~   76 (246)
T COG4221           5 KGKVALIT----GASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALP   76 (246)
T ss_pred             CCcEEEEe----cCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHH
Confidence            35789999    9999999999999999999999999999888876544110    000122345557766555554   


Q ss_pred             -C-CcccEEEeCCC--------------------cCHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 -G-VTFDVVLDNNG--------------------KNLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 -~-~~~d~Vi~~ag--------------------~~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                       . .++|++||+||                    .|+.    +++.++..+.+.+.+++|++||.....+          
T Consensus        77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~----------  146 (246)
T COG4221          77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP----------  146 (246)
T ss_pred             HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc----------
Confidence             2 25999999999                    2444    4777888888888889999999762221          


Q ss_pred             CCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecC
Q 025587          204 VVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGS  236 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~  236 (250)
                        .+....|++.|+....            +++++.|-||.+-..
T Consensus       147 --y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~  189 (246)
T COG4221         147 --YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETT  189 (246)
T ss_pred             --CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecce
Confidence              1123668877754332            589999999998543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.53  E-value=2.2e-13  Score=117.00  Aligned_cols=133  Identities=14%  Similarity=0.152  Sum_probs=93.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe---CCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~---~D~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...                .+..+.   .|++++.++++
T Consensus         5 ~gk~vlIt----Gas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----------------~~~~~~~D~~~~~~i~~~~~   64 (258)
T PRK06398          5 KDKVAIVT----GGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----------------DVDYFKVDVSNKEQVIKGID   64 (258)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCccccC----------------ceEEEEccCCCHHHHHHHHH
Confidence            35899999    99999999999999999999999999764321                233333   45667666664


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|                    +|+.++..++++    +++.+.++||++||...+.+...    
T Consensus        65 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  140 (258)
T PRK06398         65 YVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRN----  140 (258)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCC----
Confidence            2     25899999998                    244555555444    44456689999999876543221    


Q ss_pred             CCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                              ...|+..|...+.           .++++.|+||.+-.+.
T Consensus       141 --------~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~  180 (258)
T PRK06398        141 --------AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL  180 (258)
T ss_pred             --------CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence                    2456666643322           3889999999997764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.53  E-value=5.4e-14  Score=120.35  Aligned_cols=145  Identities=17%  Similarity=0.177  Sum_probs=94.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.... ...+..+.+|   .+++.+++
T Consensus         1 m~k~ilIt----G~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~i~~~~   72 (259)
T PRK12384          1 MNQVAVVI----GGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQE----INAEYGEGMAYGFGADATSEQSVLALS   72 (259)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHhcCCceeEEEEccCCCHHHHHHHH
Confidence            46789999    9999999999999999999999999986544322111    00000 0234455555   66666555


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHH----HHHHHHhCC-CCEEEEEcCcc-cccCCCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRP----VADWAKSSG-VKQFLFISSAG-IYKPADEP  197 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~----ll~~~~~~~-~~~~v~iSS~~-vy~~~~~~  197 (250)
                      +.     ..+|+|||++|                    .|+.++..    +++.+++.+ -+++|++||.. .++...  
T Consensus        73 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~--  150 (259)
T PRK12384         73 RGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH--  150 (259)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC--
Confidence            42     25899999998                    24555444    444444455 46999999854 333211  


Q ss_pred             CccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                                 ...|++.|..            .+.+++++++|||.++++..
T Consensus       151 -----------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~  192 (259)
T PRK12384        151 -----------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPM  192 (259)
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchh
Confidence                       1446666632            23479999999999887643

>PRK08643 acetoin reductase; Validated

Probab=99.53  E-value=7.4e-14  Score=119.32  Aligned_cols=144  Identities=20%  Similarity=0.209  Sum_probs=94.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+...    +.. ...++..+.+|   ++.+.++++
T Consensus         1 ~~k~~lIt----Gas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~~   71 (256)
T PRK08643          1 MSKVALVT----GAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADK----LSK-DGGKAIAVKADVSDRDQVFAAVR   71 (256)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCeEEEEECCCCCHHHHHHHHH
Confidence            36799999    9999999999999999999999999987544332111    000 01234445555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||++|.                    |+.++..    +++.+++.+ .+++|++||...+.+...   
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  148 (256)
T PRK08643         72 QVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE---  148 (256)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC---
Confidence            2     248999999982                    3334333    344444433 368999999764332211   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|++.|...            +.+++++.|+||.+.++.
T Consensus       149 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        149 ---------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence                     24476666432            236899999999998875

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.9e-14  Score=118.33  Aligned_cols=145  Identities=16%  Similarity=0.117  Sum_probs=96.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+|+||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +......+++++.+|   ++++.++++.
T Consensus         1 ~~~vlIt----Gas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          1 MKKILII----GATSDIARACARRYAAAGARLYLAARDVERLERLADD----LRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHH----HHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            4689999    9999999999999999999999999987554322111    000012245555565   6666666553


Q ss_pred             --CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          151 --VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       151 --~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                        ..+|+|||++|                    .|+.++.++++++    ++.+.++||++||.....+..         
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------  143 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA---------  143 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC---------
Confidence              24799999998                    2455555555554    445678999999964322211         


Q ss_pred             CCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          205 VKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       205 ~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                         ....|+..|..            .+.+++++.++||.++++..
T Consensus       144 ---~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~  186 (243)
T PRK07102        144 ---SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT  186 (243)
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh
Confidence               11346666532            23369999999999999853

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.53  E-value=8.8e-14  Score=118.91  Aligned_cols=142  Identities=18%  Similarity=0.133  Sum_probs=94.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      |++++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +....+..+.+   |.+++.+++.
T Consensus         1 ~~k~ilIt----Gat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~   69 (257)
T PRK07074          1 TKRTALVT----GAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADA-------LGDARFVPVACDLTDAASLAAALA   69 (257)
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------hcCCceEEEEecCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987554322111       11123444444   4666666664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.+..++++++    ++.+.++||++||...+... .    
T Consensus        70 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~----  144 (257)
T PRK07074         70 NAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-G----  144 (257)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-C----
Confidence            3     148999999982                    334444455444    45567899999996433211 0    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...            ..+++++++|||.++++..
T Consensus       145 --------~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~  186 (257)
T PRK07074        145 --------HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAW  186 (257)
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchh
Confidence                    02355544322            2268999999999999864

>PRK06128 oxidoreductase; Provisional

Probab=99.52  E-value=9.4e-14  Score=121.97  Aligned_cols=145  Identities=17%  Similarity=0.143  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++..++.+..  +.+.+.    +. .....+.++.+|   .+++.++
T Consensus        54 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~v~~~  124 (300)
T PRK06128         54 QGRKALIT----GADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQL----IQ-AEGRKAVALPGDLKDEAFCRQL  124 (300)
T ss_pred             CCCEEEEe----cCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHH----HH-HcCCeEEEEecCCCCHHHHHHH
Confidence            45899999    9999999999999999999999887754321  111000    00 011234445555   6666666


Q ss_pred             hcC-----CcccEEEeCCCc---------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCc
Q 025587          148 VGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ++.     .++|+|||++|.                     |+.++.++++++.+.  .-++||++||...|.....   
T Consensus       125 ~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  201 (300)
T PRK06128        125 VERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT---  201 (300)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC---
Confidence            542     258999999982                     456777777777652  2359999999887754322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+.+|...            ..++++++|+||.+.++..
T Consensus       202 ---------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~  243 (300)
T PRK06128        202 ---------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQ  243 (300)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCc
Confidence                     13477666332            2379999999999999964

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.52  E-value=3.1e-13  Score=115.72  Aligned_cols=137  Identities=19%  Similarity=0.190  Sum_probs=94.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...              ...+.++.+|   .+++.++++
T Consensus         8 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~   69 (260)
T PRK06523          8 AGKRALVT----GGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVAR   69 (260)
T ss_pred             CCCEEEEE----CCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHHH
Confidence            45899999    99999999999999999999999999864211              1123444444   565554443


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     ..+|+|||++|.                      |+.++    +.+++.+++.+.++||++||...+.+...  
T Consensus        70 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--  147 (260)
T PRK06523         70 AVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPE--  147 (260)
T ss_pred             HHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC--
Confidence            1     248999999982                      33343    34455566666679999999765543110  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ....|+..|...+            .++++++++||.+.++..
T Consensus       148 ---------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~  190 (260)
T PRK06523        148 ---------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA  190 (260)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence                     1245776664322            269999999999998863

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.52  E-value=7.7e-14  Score=118.12  Aligned_cols=140  Identities=19%  Similarity=0.158  Sum_probs=97.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++++++||    ||+|+||+++++.|+++|++|++++|+.+..+.+.+.          .+..++.+   |.+++.++++
T Consensus         8 ~~~~~lIt----Ga~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~   73 (245)
T PRK07060          8 SGKSVLVT----GASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE----------TGCEPLRLDVGDDAAIRAALA   73 (245)
T ss_pred             CCCEEEEe----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------hCCeEEEecCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322111          12233334   4667777765


Q ss_pred             C-CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 G-VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~-~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      . ..+|+|||++|.                    |+.+..++++++.+    .+ .++||++||...+.+...       
T Consensus        74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  146 (245)
T PRK07060         74 AAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD-------  146 (245)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC-------
Confidence            4 248999999982                    44556666666544    22 479999999876544321       


Q ss_pred             CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                           ...|+..|...+            .+++++.+|||.++++..
T Consensus       147 -----~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~  188 (245)
T PRK07060        147 -----HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA  188 (245)
T ss_pred             -----CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence                 144666554332            269999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.52  E-value=8.3e-14  Score=124.34  Aligned_cols=144  Identities=15%  Similarity=0.160  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      .+++|+||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +. .....+..+.+   |.+++.++++
T Consensus         7 ~~k~vlIT----Gas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~----l~-~~g~~~~~v~~Dv~d~~~v~~~~~   77 (334)
T PRK07109          7 GRQVVVIT----GASAGVGRATARAFARRGAKVVLLARGEEGLEALAAE----IR-AAGGEALAVVADVADAEAVQAAAD   77 (334)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-HcCCcEEEEEecCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987554432111    00 01123444444   4677766654


Q ss_pred             C-----CcccEEEeCCCc--------------------C----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++||++|.                    |    +.+++.+++.+++.+.++||++||...|.....    
T Consensus        78 ~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~----  153 (334)
T PRK07109         78 RAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL----  153 (334)
T ss_pred             HHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc----
Confidence            2     258999999983                    1    334666777777777789999999887754321    


Q ss_pred             CCCCCCCCCChhHHHHHHH---------H-----hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------E-----NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e-----~~~~~~ilRp~~i~G~~  237 (250)
                              ...|+..|...         |     .++++++|+||.+.++.
T Consensus       154 --------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~  196 (334)
T PRK07109        154 --------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ  196 (334)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence                    25687777431         2     14899999999998874

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.52  E-value=8e-14  Score=118.31  Aligned_cols=140  Identities=16%  Similarity=0.138  Sum_probs=94.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|+||    ||+|+||++++++|+++|++|++++|+.+..++..+.        ....+.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   72 (249)
T PRK06500          5 QGKTALIT----GGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE--------LGESALVIRADAGDVAAQKALAQ   72 (249)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH--------hCCceEEEEecCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999976443322110        11233444444   454444433


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCc-ccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSA-GIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~-~vy~~~~~~~~~e  201 (250)
                      .     .++|+|||++|                    .|+.++.++++++..  ....++|+++|. +.|+...      
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~------  146 (249)
T PRK06500         73 ALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN------  146 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC------
Confidence            1     24899999998                    246677788888864  223577887774 4443211      


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|...+            .+++++++|||.++++.
T Consensus       147 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~  187 (249)
T PRK06500        147 -------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL  187 (249)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence                   255776664322            26899999999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.52  E-value=2.2e-13  Score=116.47  Aligned_cols=139  Identities=22%  Similarity=0.182  Sum_probs=96.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      ++|+++||    ||+|+||++++++|+++|++|+++.|+.+. .+.+           ...++.++.+   |++++.+++
T Consensus         6 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-----------~~~~~~~~~~Dl~~~~~~~~~~   70 (255)
T PRK06463          6 KGKVALIT----GGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-----------REKGVFTIKCDVGNRDQVKKSK   70 (255)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-----------HhCCCeEEEecCCCHHHHHHHH
Confidence            35899999    999999999999999999999988765432 1211           1112344444   577777766


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||++|.                    |+.+    ++.+++.+++.+.++||++||...++....   
T Consensus        71 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~---  147 (255)
T PRK06463         71 EVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAE---  147 (255)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCC---
Confidence            53     258999999982                    3444    466666676666779999999876643211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ....|++.|...+            .+++++.++||.+-.+.
T Consensus       148 --------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~  189 (255)
T PRK06463        148 --------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM  189 (255)
T ss_pred             --------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence                    1245777764332            26999999999987664

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.3e-13  Score=118.95  Aligned_cols=144  Identities=16%  Similarity=0.162  Sum_probs=98.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~-  150 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. ....++.++.+|   .+++.++++. 
T Consensus         1 ~~vlVt----GasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~~~i   71 (270)
T PRK05650          1 NRVMIT----GAASGLGRAIALRWAREGWRLALADVNEEGGEETLKL----LR-EAGGDGFYQRCDVRDYSQLTALAQAC   71 (270)
T ss_pred             CEEEEe----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHHHHH
Confidence            579999    9999999999999999999999999987554322110    00 011234445555   6666665542 


Q ss_pred             ----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                          ..+|+|||++|.                    |+.    .++.+++.+++.+.++||++||...+.+...      
T Consensus        72 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------  145 (270)
T PRK05650         72 EEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA------  145 (270)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC------
Confidence                258999999982                    222    3444666677777789999999865543221      


Q ss_pred             CCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                            ...|+..|...+            .++++++++||.+.++...
T Consensus       146 ------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  188 (270)
T PRK05650        146 ------MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLD  188 (270)
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccc
Confidence                  256777764322            2689999999999888643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.52  E-value=9e-14  Score=119.07  Aligned_cols=149  Identities=15%  Similarity=0.169  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++||||    ||+|+||.+++++|+++|++|++++|+.+..+...+.    +. .....+.++.+|   ++++.++++
T Consensus        11 ~~k~ilIt----Ga~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----i~-~~~~~~~~~~~Dl~d~~~i~~~~~   81 (259)
T PRK08213         11 SGKTALVT----GGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAH----LE-ALGIDALWIAADVADEADIERLAE   81 (259)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999976543322110    00 011233445555   666655543


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC-----CCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~-----~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|+|||++|                    .|+.++.++++++.+.     +.++||++||...+......  
T Consensus        82 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~--  159 (259)
T PRK08213         82 ETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE--  159 (259)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--
Confidence            2     25899999998                    2456677778766543     66799999997655432211  


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                            .+....|..+|...+.            ++++++++|+.+-++..
T Consensus       160 ------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~  204 (259)
T PRK08213        160 ------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT  204 (259)
T ss_pred             ------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch
Confidence                  0012457766643322            58899999998877643

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.3e-13  Score=119.13  Aligned_cols=139  Identities=19%  Similarity=0.159  Sum_probs=96.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      +++||||    ||+|+||++++++|+++|++|++++|+++..+++.+.       +  ..+.++.+   |++++.++++.
T Consensus         5 ~~~ilVt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-------~--~~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          5 GKVVAIT----GGARGIGLATARALAALGARVAIGDLDEALAKETAAE-------L--GLVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------h--ccceEEEccCCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999987554432111       0  02334444   46666555532


Q ss_pred             -----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|++||++|.                    |+.+    ++.+++.+++.+.++||++||...+.....     
T Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  146 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG-----  146 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC-----
Confidence                 258999999983                    3333    444556666778889999999765543221     


Q ss_pred             CCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+.+|.            +.+.++++++++||.+.++.
T Consensus       147 -------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~  187 (273)
T PRK07825        147 -------MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL  187 (273)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh
Confidence                   245666663            22337999999999987664

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.52  E-value=5.2e-14  Score=123.82  Aligned_cols=158  Identities=13%  Similarity=0.032  Sum_probs=100.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++.|+.+..+...+.    +.. .....+.++.+|   .+++.+++
T Consensus        15 ~~k~vlIt----Gas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dl~d~~~v~~~~   86 (306)
T PRK06197         15 SGRVAVVT----GANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAAR----ITAATPGADVTLQELDLTSLASVRAAA   86 (306)
T ss_pred             CCCEEEEc----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhCCCCceEEEECCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999986543321100    000 001234455555   66666555


Q ss_pred             cC-----CcccEEEeCCCc------------------CHHh----HHHHHHHHHhCCCCEEEEEcCccccc--CCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK--PADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~--~~~~~~~  199 (250)
                      +.     .++|+|||+||.                  |+.+    +..+++.+++.+.++||++||.+.+.  .......
T Consensus        87 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         87 DALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             HHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            42     258999999982                  3444    67788888777778999999987543  2111111


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEE--EecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWAS--FRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~i--lRp~~i~G~~~~  239 (250)
                      .+..+..+ ...|+.+|...+.            ++++++  +.||.|..+..+
T Consensus       167 ~~~~~~~~-~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        167 QWERRYNR-VAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             CcccCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence            11111122 3579888854332            455544  479999877543

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.52  E-value=5.3e-14  Score=119.54  Aligned_cols=149  Identities=17%  Similarity=0.197  Sum_probs=97.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.-..   ......+.++.+|   ++++.++++
T Consensus         1 ~~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          1 TRQKILIT----GASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA---RYPGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---hCCCceEEEEEcCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987554332111000   0012234555555   666666554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|+                    |+.+..+++++    +++.+.++||++||.........    
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  149 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG----  149 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC----
Confidence            2     248999999982                    34444444444    45567789999999654322111    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                            + ...|+.+|...+            .++++++++||.+.++...
T Consensus       150 ------~-~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  193 (248)
T PRK08251        150 ------V-KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA  193 (248)
T ss_pred             ------C-cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence                  0 144776664332            2589999999999887543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.2e-13  Score=118.82  Aligned_cols=141  Identities=17%  Similarity=0.199  Sum_probs=95.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+.++.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~   72 (261)
T PRK08265          5 AGKVAIVT----GGATLIGAAVARALVAAGARVAIVDIDADNGAAVAAS--------LGERARFIATDITDDAAIERAVA   72 (261)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hCCeeEEEEecCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544432211        12234455555   666766665


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      .     ..+|++||++|.                   |+.+...+++.+..   .+.++||++||...+.....      
T Consensus        73 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------  146 (261)
T PRK08265         73 TVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG------  146 (261)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------
Confidence            3     258999999983                   34444444444332   34468999999764332211      


Q ss_pred             CCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                            ...|+..|...+            .++++++|+||.+.++.
T Consensus       147 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~  187 (261)
T PRK08265        147 ------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRV  187 (261)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence                  244666663322            26999999999988774

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.3e-13  Score=116.18  Aligned_cols=142  Identities=23%  Similarity=0.223  Sum_probs=94.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++|+||    ||+|+||++++++|+++|++|++++|+++....+.+.       +.. ..++++.+|   .+++.++++
T Consensus         6 ~~~ilIt----Gatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~D~~~~~~~~~~~~   74 (237)
T PRK07326          6 GKVALIT----GGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAE-------LNNKGNVLGLAADVRDEADVQRAVD   74 (237)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHH-------HhccCcEEEEEccCCCHHHHHHHHH
Confidence            5799999    9999999999999999999999999987544322111       110 235555555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +     ..+|+|||++|.                    |+.+...+++++.+   .+.+++|++||...+.....     
T Consensus        75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----  149 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAG-----  149 (237)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCC-----
Confidence            2     158999999982                    33444455555433   34578999999765432211     


Q ss_pred             CCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|..+|.            +.+.+++++++|||.+.++..
T Consensus       150 -------~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~  191 (237)
T PRK07326        150 -------GAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFN  191 (237)
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccc
Confidence                   144665552            122378999999999987753

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.1e-13  Score=119.40  Aligned_cols=145  Identities=15%  Similarity=0.190  Sum_probs=98.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +......++..+.+|   ++++.++++
T Consensus         7 ~~k~~lIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          7 SGKLAFTT----ASSKGIGFGVARVLARAGADVILLSRNEENLKKAREK----IKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999987554332111    000012234455555   666666654


Q ss_pred             C----CcccEEEeCCCc--------------------C----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G----VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~----~~~d~Vi~~ag~--------------------~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .    ..+|++||++|.                    |    +..++.+++.+++.+.+++|++||...+.+...     
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~-----  153 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN-----  153 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc-----
Confidence            2    248999999982                    2    223667777787777789999999875432211     


Q ss_pred             CCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                             ...|++.|..            ...+++++.|.||.+..+.
T Consensus       154 -------~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (263)
T PRK08339        154 -------IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR  194 (263)
T ss_pred             -------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence                   1345555522            2236999999999997764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.7e-13  Score=117.21  Aligned_cols=144  Identities=17%  Similarity=0.156  Sum_probs=95.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++++|||    ||+|+||++++++|+++|++|++++|+++.. ++.+.    +. .....+..+.+|   ++++.++++
T Consensus         6 ~~~~ilIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   75 (258)
T PRK08628          6 KDKVVIVT----GGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEE----LR-ALQPRAEFVQVDLTDDAQCRDAVE   75 (258)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHH----HH-hcCCceEEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987543 11100    00 012234455555   666766665


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      +     ..+|+|||++|.                   |+.+..++.+.+.+   .+.++||++||...+.+...      
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------  149 (258)
T PRK08628         76 QTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG------  149 (258)
T ss_pred             HHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC------
Confidence            3     258999999992                   23444445444432   23468999999765432211      


Q ss_pred             CCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          203 DVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                            ...|+.+|...            +.+++++.|+||.++++..
T Consensus       150 ------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~  191 (258)
T PRK08628        150 ------TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLY  191 (258)
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHH
Confidence                  24577666332            2369999999999999863

>PRK08017 oxidoreductase; Provisional

Probab=99.51  E-value=3.7e-13  Score=114.76  Aligned_cols=137  Identities=21%  Similarity=0.161  Sum_probs=93.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      .++|+||    ||+|+||.+++++|+++|++|++++|+.+..+.+.           ..+++.+.+   |.+++.++++.
T Consensus         2 ~k~vlVt----Gasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~   66 (256)
T PRK08017          2 QKSVLIT----GCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-----------SLGFTGILLDLDDPESVERAADE   66 (256)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-----------hCCCeEEEeecCCHHHHHHHHHH
Confidence            4689999    99999999999999999999999999875544321           113344444   45555444321


Q ss_pred             ------CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          151 ------VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 ------~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                            ..+|.++|++|.                    |+.++    +.+++.+++.+.+++|++||...+....     
T Consensus        67 i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----  141 (256)
T PRK08017         67 VIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP-----  141 (256)
T ss_pred             HHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC-----
Confidence                  357999999983                    22232    3457777777888999999964332211     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ....|+..|...+            .+++++++|||.+..+.
T Consensus       142 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  183 (256)
T PRK08017        142 -------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRF  183 (256)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccch
Confidence                   1255777664332            36899999999887653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.7e-13  Score=115.08  Aligned_cols=138  Identities=19%  Similarity=0.147  Sum_probs=93.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+...  ..        ....++.++.+|   .+++.+++.+
T Consensus         1 ~~~vlIt----GasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~--------~~~~~~~~~~~D~~~~~~~~~~~~~   66 (243)
T PRK07023          1 AVRAIVT----GHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA--------AAGERLAEVELDLSDAAAAAAWLAG   66 (243)
T ss_pred             CceEEEe----cCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh--------ccCCeEEEEEeccCCHHHHHHHHHH
Confidence            3589999    99999999999999999999999999764311  00        011234444444   6666664322


Q ss_pred             ---------CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCC
Q 025587          151 ---------VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       151 ---------~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                               ..+|++||++|.                     |+.+    +..+++.+++.+.++||++||...+.+...
T Consensus        67 ~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  146 (243)
T PRK07023         67 DLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAG  146 (243)
T ss_pred             HHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCC
Confidence                     258999999882                     2334    445555555556789999999876643221


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH-----------hCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE-----------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e-----------~~~~~~ilRp~~i~G~~  237 (250)
                                  ...|+..|...+           .+++++.++||.+-++.
T Consensus       147 ------------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~  186 (243)
T PRK07023        147 ------------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGM  186 (243)
T ss_pred             ------------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence                        256777774432           26899999999986653

>PRK07069 short chain dehydrogenase; Validated

Probab=99.51  E-value=8.5e-14  Score=118.29  Aligned_cols=144  Identities=15%  Similarity=0.208  Sum_probs=98.0

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC-CCccccCCCCCCCcccchhcC-C---ceEEeCCHHHHHhhhcC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSA-G---GKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~-~---v~~v~~D~~~l~~~l~~  150 (250)
                      +|+||    ||+|+||+++++.|+++|++|++++|+ .+..+.+.+.    +...... .   +..+..|.+++.++++.
T Consensus         1 ~ilVt----G~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (251)
T PRK07069          1 RAFIT----GAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAE----INAAHGEGVAFAAVQDVTDEAQWQALLAQ   72 (251)
T ss_pred             CEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH----HHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence            48999    999999999999999999999999997 4333322110    0000001 1   22334457777666542


Q ss_pred             -----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.    .++.+++++++.+.++||++||...+......    
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~----  148 (251)
T PRK07069         73 AADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDY----  148 (251)
T ss_pred             HHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCC----
Confidence                 248999999982                    233    67888888888778899999998776543221    


Q ss_pred             CCCCCCCCChhHHHHHHHH------------h--CCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------N--FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~--~~~~~ilRp~~i~G~~~~  239 (250)
                              ..|+..|...+            .  +++++.++||.+.++...
T Consensus       149 --------~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~  192 (251)
T PRK07069        149 --------TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVD  192 (251)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchh
Confidence                    34666663322            1  378999999999998643

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.1e-13  Score=117.36  Aligned_cols=145  Identities=17%  Similarity=0.162  Sum_probs=97.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..|+|+||    ||+|+||++++++|+++|++|++++|+++......+.    +. .....+.++.+|   .+++.++++
T Consensus         6 ~~~~vlIt----Ga~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~   76 (250)
T PRK12939          6 AGKRALVT----GAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAA----LE-AAGGRAHAIAADLADPASVQRFFD   76 (250)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999887544432111    00 011234555555   666666664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|.                    |+.+..++++++.    +.+.++||++||...+.+...    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  152 (250)
T PRK12939         77 AAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK----  152 (250)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC----
Confidence            3     258999999983                    3445555655554    344569999999765543221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...+            .+++++.++||.+.++..
T Consensus       153 --------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~  194 (250)
T PRK12939        153 --------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEAT  194 (250)
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccc
Confidence                    134665553322            268999999999987764

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2.3e-13  Score=119.26  Aligned_cols=146  Identities=17%  Similarity=0.188  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      .+++|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.. ....+.++.+   |.+++.++++
T Consensus        39 ~~k~vlIt----GasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~----l~~-~~~~~~~~~~Dl~d~~~v~~~~~  109 (293)
T PRK05866         39 TGKRILLT----GASSGIGEAAAEQFARRGATVVAVARREDLLDAVADR----ITR-AGGDAMAVPCDLSDLDAVDALVA  109 (293)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHh-cCCcEEEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987554432111    000 0122334444   4677776665


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     ..+|+|||++|.                      |+.+    ++.+++.+++.+.+++|++||.+.+....   
T Consensus       110 ~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  186 (293)
T PRK05866        110 DVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS---  186 (293)
T ss_pred             HHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC---
Confidence            1     258999999983                      2223    33444555567778999999977654211   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              +....|+++|...+            .++++++++||.+-++..
T Consensus       187 --------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~  230 (293)
T PRK05866        187 --------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI  230 (293)
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc
Confidence                    11245777774432            269999999998877754

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.51  E-value=4.5e-13  Score=114.38  Aligned_cols=136  Identities=22%  Similarity=0.196  Sum_probs=95.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+...             ....+.++.+|   .+++.++++
T Consensus         5 ~~k~~lIt----Gas~gIG~~la~~l~~~g~~v~~~~r~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~   67 (252)
T PRK07856          5 TGRVVLVT----GGTRGIGAGIARAFLAAGATVVVCGRRAPETV-------------DGRPAEFHAADVRDPDQVAALVD   67 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCChhhhh-------------cCCceEEEEccCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999864310             11234444454   666666654


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh-----CCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS-----SGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~-----~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||++|                    .|+.++..+++++..     .+.++||++||...+.+...   
T Consensus        68 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  144 (252)
T PRK07856         68 AIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG---  144 (252)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC---
Confidence            3     25899999998                    245566666666543     23468999999765543221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                               ...|+..|...+.           .++++.++||.+.++.
T Consensus       145 ---------~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        145 ---------TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence                     2457766644332           2789999999998775

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.50  E-value=1.3e-13  Score=117.80  Aligned_cols=147  Identities=19%  Similarity=0.179  Sum_probs=97.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. ....++..+.+|   .+++.+++
T Consensus         7 ~~~k~ilIt----Gasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~   77 (258)
T PRK06949          7 LEGKVALVT----GASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAE----IE-AEGGAAHVVSLDVTDYQSIKAAV   77 (258)
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHHH
Confidence            446899999    9999999999999999999999999987654432111    00 011234444444   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCC--------CCEEEEEcCcccc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG--------VKQFLFISSAGIY  191 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~--------~~~~v~iSS~~vy  191 (250)
                      +.     ..+|+|||++|.                    |+.+..++++++.    +..        .+++|++||...+
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  157 (258)
T PRK06949         78 AHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL  157 (258)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc
Confidence            43     248999999982                    3334444444443    222        3589999997765


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      .....            ...|+..|...+            .++++++++||.|+++...
T Consensus       158 ~~~~~------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~  205 (258)
T PRK06949        158 RVLPQ------------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINH  205 (258)
T ss_pred             CCCCC------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcch
Confidence            43211            245776663322            2699999999999998643

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.9e-13  Score=116.05  Aligned_cols=148  Identities=16%  Similarity=0.132  Sum_probs=97.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      ...++||||    ||+|+||++++++|+++| ++|++++|+.+. .+.+.+.    +......+++++.+|   .+++.+
T Consensus         6 ~~~~~vlIt----Gas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~----l~~~~~~~v~~~~~D~~~~~~~~~   77 (253)
T PRK07904          6 GNPQTILLL----GGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQ----MKAAGASSVEVIDFDALDTDSHPK   77 (253)
T ss_pred             CCCcEEEEE----cCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHH----HHhcCCCceEEEEecCCChHHHHH
Confidence            346799999    999999999999999995 999999998764 3322111    001111245555555   555443


Q ss_pred             hh----cCCcccEEEeCCCcC--------------------H----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          147 VV----GGVTFDVVLDNNGKN--------------------L----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       147 ~l----~~~~~d~Vi~~ag~~--------------------~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++    +..++|++|+++|..                    +    ..++.+++++++.+.++||++||...+.+..   
T Consensus        78 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~---  154 (253)
T PRK07904         78 VIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRR---  154 (253)
T ss_pred             HHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCC---
Confidence            33    223599999998831                    1    1235578888887788999999976432211   


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ....|+.+|...            ..++++++++||.+..+...
T Consensus       155 ---------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~  198 (253)
T PRK07904        155 ---------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA  198 (253)
T ss_pred             ---------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc
Confidence                     113477666432            33699999999999887443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.50  E-value=3.2e-13  Score=114.74  Aligned_cols=143  Identities=17%  Similarity=0.185  Sum_probs=95.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+...  ...+.    +. .....+..+.+|   .+++.++++
T Consensus         4 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~vi~~~r~~~~--~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   72 (248)
T TIGR01832         4 EGKVALVT----GANTGLGQGIAVGLAEAGADIVGAGRSEPS--ETQQQ----VE-ALGRRFLSLTADLSDIEAIKALVD   72 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCchHH--HHHHH----HH-hcCCceEEEECCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999986521  10000    00 011234555555   666665554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||++|.                    |+.+...+++++.    +.+ .+++|++||...|.+....  
T Consensus        73 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~--  150 (248)
T TIGR01832        73 SAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRV--  150 (248)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCC--
Confidence            2     258999999982                    4445555555543    333 5699999998776543221  


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ..|+..|...+            .++++++++||.+..+..
T Consensus       151 ----------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  191 (248)
T TIGR01832       151 ----------PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNT  191 (248)
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcch
Confidence                      34666664322            269999999999988854

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.6e-13  Score=115.30  Aligned_cols=148  Identities=21%  Similarity=0.197  Sum_probs=97.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|||    ||+|+||++++++|+++|++|++++|+.+. .+.+.+.    +.. ...++..+.+|   ++++.++++
T Consensus         6 ~k~vlIt----GasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~~   76 (248)
T PRK07806          6 GKTALVT----GSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAE----IEA-AGGRASAVGADLTDEESVAALMD   76 (248)
T ss_pred             CcEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHH----HHh-cCCceEEEEcCCCCHHHHHHHHH
Confidence            4799999    999999999999999999999999987532 1111000    000 01234445555   677666654


Q ss_pred             C-----CcccEEEeCCC--------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          150 G-----VTFDVVLDNNG--------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      .     ..+|+|||++|              +|+.++.++++++.+.  ..+++|++||........    .+..   +.
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~---~~  149 (248)
T PRK07806         77 TAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTM---PE  149 (248)
T ss_pred             HHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCC---cc
Confidence            2     24899999997              3677888999998863  235899999964321111    0111   11


Q ss_pred             CChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          209 AGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       209 ~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                      ...|+.+|...|.            ++++++++|+.+-++.
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~  190 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTV  190 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCch
Confidence            2567777754443            5889999999887763

>PRK09242 tropinone reductase; Provisional

Probab=99.50  E-value=9.9e-14  Score=118.67  Aligned_cols=147  Identities=18%  Similarity=0.222  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+++.+.    +... ....+..+.+|   .+++.+++
T Consensus         8 ~~k~~lIt----Ga~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          8 DGQTALIT----GASKGIGLAIAREFLGLGADVLIVARDADALAQARDE----LAEEFPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            45899999    9999999999999999999999999987554432211    0000 01234455555   55555544


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||++|.                    |+.+...+++++    ++.+.++||++||...+.+...   
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  156 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS---  156 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC---
Confidence            32     248999999982                    445555555554    4456679999999876554322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+..|...            ..+++++.++||.+.++...
T Consensus       157 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        157 ---------GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccc
Confidence                     13466555222            23699999999999888643

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.50  E-value=1.2e-13  Score=113.95  Aligned_cols=144  Identities=21%  Similarity=0.225  Sum_probs=114.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +++||||    ||+|.+|++|.+.+.+.|.  +-.++.-+.                      +.+..+.++.+.++...
T Consensus         1 s~kIlVt----Gg~GLVGsAi~~vv~~q~~~~e~wvf~~sk----------------------d~DLt~~a~t~~lF~~e   54 (315)
T KOG1431|consen    1 SKKILVT----GGTGLVGSAIVKVVQEQGFDDENWVFIGSK----------------------DADLTNLADTRALFESE   54 (315)
T ss_pred             CceEEEe----cCCchHHHHHHHHHHhcCCCCcceEEeccc----------------------cccccchHHHHHHHhcc
Confidence            4799999    9999999999999999875  322222211                      11222678888999888


Q ss_pred             cccEEEeCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC----CCCCCCC
Q 025587          152 TFDVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAG  210 (250)
Q Consensus       152 ~~d~Vi~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~----~~~~~~~  210 (250)
                      ++..|||.|+                 .|+....|++..|.+.|++++|++.|.|+|.+....|++|..    ++.|..-
T Consensus        55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~  134 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNF  134 (315)
T ss_pred             CCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCch
Confidence            8999999987                 356678899999999999999999999999998888999963    4555556


Q ss_pred             hhHHHHHH---------HHhCCcEEEEecCeeecCCCCCCcc
Q 025587          211 HVQVEKYI---------SENFSNWASFRPQYMIGSGNNKDCE  243 (250)
Q Consensus       211 ~y~~~k~~---------~e~~~~~~ilRp~~i~G~~~~~~~~  243 (250)
                      .|...|.+         .++|..++.+-|.++|||+++-..+
T Consensus       135 gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe  176 (315)
T KOG1431|consen  135 GYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPE  176 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcc
Confidence            78888833         3457899999999999999876543

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.50  E-value=2.1e-13  Score=117.34  Aligned_cols=145  Identities=17%  Similarity=0.199  Sum_probs=98.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+..+.+.+.    +.. ....+.++.+|   ++.+.+++
T Consensus         8 ~~~~~vlIt----GasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          8 LDDQVAVVT----GAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQ----IRA-AGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEccCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987544332111    000 11234444455   66666555


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh-----CCCCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS-----SGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~-----~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|+|||+||                    .|+.++.++++++.+     .+.++||++||...+.+..   
T Consensus        79 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---  155 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR---  155 (263)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC---
Confidence            42     25899999998                    245667777777653     4567899999964332111   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                               ....|++.|...+.           .++++.++||.+..+.
T Consensus       156 ---------~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~  196 (263)
T PRK07814        156 ---------GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSA  196 (263)
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence                     12568877754333           3789999999987664

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.49  E-value=2.2e-13  Score=115.24  Aligned_cols=145  Identities=19%  Similarity=0.167  Sum_probs=97.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+ ..+.+...    +. .....+.++.+|   .+.+.++++
T Consensus         2 ~k~vlIt----G~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~v~~~~~   72 (245)
T PRK12824          2 KKIALVT----GAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEE----YG-FTEDQVRLKELDVTDTEECAEALA   72 (245)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH----hh-ccCCeEEEEEcCCCCHHHHHHHHH
Confidence            5789999    99999999999999999999999999853 11111000    00 011235555555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.+..+    +++.+++.+.++||++||...+.....    
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----  148 (245)
T PRK12824         73 EIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG----  148 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC----
Confidence            3     248999999982                    3344444    466666667789999999776643221    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|..+|...            +.++++++++||.+.++...
T Consensus       149 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  191 (245)
T PRK12824        149 --------QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE  191 (245)
T ss_pred             --------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchh
Confidence                    14477666322            23689999999999887543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.4e-13  Score=116.04  Aligned_cols=142  Identities=15%  Similarity=0.179  Sum_probs=95.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+......        +.....+..+.+|   ++++.++++
T Consensus        14 ~~k~vlIt----Gas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~~~~~~~   81 (255)
T PRK06841         14 SGKVAVVT----GGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA--------QLLGGNAKGLVCDVSDSQSVEAAVA   81 (255)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------HhhCCceEEEEecCCCHHHHHHHHH
Confidence            45799999    99999999999999999999999999764321110        1111223344444   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.+..++++++.    +.+.++||++||.........    
T Consensus        82 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  157 (255)
T PRK06841         82 AVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER----  157 (255)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC----
Confidence            3     158999999982                    4455666666654    346789999999764322111    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...+            .+++++.|+||.+..+..
T Consensus       158 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~  199 (255)
T PRK06841        158 --------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELG  199 (255)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccc
Confidence                    144666664322            269999999999988754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.1e-13  Score=116.94  Aligned_cols=143  Identities=15%  Similarity=0.139  Sum_probs=97.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.. ....+.++.+|   .+.+.++++.
T Consensus         1 ~~~vlVt----Gasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          1 GKVVIIT----GASEGIGRALAVRLARAGAQLVLAARNETRLASLAQE----LAD-HGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEccCCCHHHHHHHHHH
Confidence            3689999    9999999999999999999999999986543322110    000 12234455555   6666666543


Q ss_pred             -----CcccEEEeCCCc---------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK---------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                     |+.++.++++.+.+   .+.+++|++||...|.+...     
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  146 (263)
T PRK06181         72 AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT-----  146 (263)
T ss_pred             HHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC-----
Confidence                 258999999982                     34556666666642   23578999999876654221     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|...+            .++++++++||.+.++.
T Consensus       147 -------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  187 (263)
T PRK06181        147 -------RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI  187 (263)
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCc
Confidence                   255777764322            36899999999998775

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.49  E-value=7.8e-13  Score=112.52  Aligned_cols=136  Identities=15%  Similarity=0.068  Sum_probs=93.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ..|++|||    ||+|+||++++++|+++|++|++++|+.  ...            ....+..+.+   |.+++.++++
T Consensus         7 ~~k~vlIt----Gas~~iG~~la~~l~~~G~~v~~~~~~~--~~~------------~~~~~~~~~~D~~~~~~~~~~~~   68 (252)
T PRK08220          7 SGKTVWVT----GAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ------------EDYPFATFVLDVSDAAAVAQVCQ   68 (252)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecch--hhh------------cCCceEEEEecCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999876  110            1112334444   4777777665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|.                    |+.+...+++++    ++.+.++||++||.....+...    
T Consensus        69 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----  144 (252)
T PRK08220         69 RLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIG----  144 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCC----
Confidence            3     248999999982                    344445555554    4456679999999764432211    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...            ..++++++++||.++++..
T Consensus       145 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~  186 (252)
T PRK08220        145 --------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ  186 (252)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence                    14466555322            2369999999999999863

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.3e-13  Score=118.39  Aligned_cols=145  Identities=17%  Similarity=0.178  Sum_probs=96.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEe---CCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVW---GDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~---~D~~~l~~~l  148 (250)
                      +.|++|||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.+. ....+..+.   .|.+++.+++
T Consensus         7 ~~k~~lIt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          7 EGRVAVVT----GGSSGIGLATVELLLEAGASVAICGRDEERLASAEAR----LREKFPGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HHhhCCCceEEEEEecCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987654432111    0000 011233344   4566666655


Q ss_pred             cC-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     ..+|+|||+||.                    |+    ..++.+++.+++.+.++||++||...+.+...   
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  155 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH---  155 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC---
Confidence            32     248999999982                    22    23555666666666779999999765433211   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|++.|..            .+.+++++.++||.+..+.
T Consensus       156 ---------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        156 ---------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             ---------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence                     1446655532            2337999999999998764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2e-13  Score=116.77  Aligned_cols=143  Identities=17%  Similarity=0.148  Sum_probs=94.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG--  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~--  150 (250)
                      ++++||||    ||+|+||.+++++|+++|++|++++|+.+..+...+.       +...-+..+..|.+++.++++.  
T Consensus         6 ~~~~vlIt----GasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~   74 (255)
T PRK06057          6 AGRVAVIT----GGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADE-------VGGLFVPTDVTDEDAVNALFDTAA   74 (255)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-------cCCcEEEeeCCCHHHHHHHHHHHH
Confidence            45899999    9999999999999999999999999986543321110       0011123444557777766653  


Q ss_pred             ---CcccEEEeCCCc----------------------CHHhH----HHHHHHHHhCCCCEEEEEcCc-ccccCCCCCCcc
Q 025587          151 ---VTFDVVLDNNGK----------------------NLDAV----RPVADWAKSSGVKQFLFISSA-GIYKPADEPPHV  200 (250)
Q Consensus       151 ---~~~d~Vi~~ag~----------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~-~vy~~~~~~~~~  200 (250)
                         .++|+|||++|.                      |+.++    +.+++.+++.+.+++|++||. ++++....    
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~----  150 (255)
T PRK06057         75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS----  150 (255)
T ss_pred             HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC----
Confidence               258999999982                      22222    334455555566789999985 45543211    


Q ss_pred             CCCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|.            +...++++++++||.+.++..
T Consensus       151 --------~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~  192 (255)
T PRK06057        151 --------QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLL  192 (255)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchh
Confidence                    134666662            112369999999999998864

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.1e-13  Score=118.51  Aligned_cols=145  Identities=19%  Similarity=0.172  Sum_probs=96.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +... ....+..+.+|   ++++.+++
T Consensus         6 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          6 AGKVALVT----GAAQGIGAAIARAFAREGAAVALADLDAALAERAAAA----IARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhccCCceEEEEEccCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432211    0000 11234455555   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     ..+|++||++|.                    |+.++..+++    .+++.+.++||++||...+.....   
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  154 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG---  154 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC---
Confidence            42     258999999982                    3444444444    444556679999999765433211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|++.|...+            .+++++.|+||.+-.+.
T Consensus       155 ---------~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~  195 (260)
T PRK07063        155 ---------CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL  195 (260)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence                     245776664332            26999999999997765

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.49  E-value=2.8e-13  Score=115.73  Aligned_cols=143  Identities=21%  Similarity=0.199  Sum_probs=94.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeC---CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWG---DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~---D~~~l~~~  147 (250)
                      .+|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +.  ...+..+.+   |.+++.++
T Consensus         8 ~~k~~lIt----Gas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~-------l~~~~~~~~~~~~Dl~~~~~~~~~   76 (254)
T PRK08085          8 AGKNILIT----GSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAK-------LRQEGIKAHAAPFNVTHKQEVEAA   76 (254)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH-------HHhcCCeEEEEecCCCCHHHHHHH
Confidence            46799999    9999999999999999999999999987554432111       11  112333444   46666666


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++.     ..+|+|||++|.                    |+.+...+++    .+++.+.++||++||.........  
T Consensus        77 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--  154 (254)
T PRK08085         77 IEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT--  154 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC--
Confidence            542     248999999982                    3344444444    444455679999999753221111  


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+..|...            ..++++++|+||.+.++..
T Consensus       155 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~  196 (254)
T PRK08085        155 ----------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT  196 (254)
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence                      14466665332            2379999999999999864

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.9e-13  Score=113.22  Aligned_cols=137  Identities=21%  Similarity=0.242  Sum_probs=94.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++ ++|++++|+.+..+.+.+         ...+++++.+|   .+++.++++.
T Consensus         3 ~~~vlVt----G~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~   68 (227)
T PRK08219          3 RPTALIT----GASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA---------ELPGATPFPVDLTDPEAIAAAVEQ   68 (227)
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH---------HhccceEEecCCCCHHHHHHHHHh
Confidence            5789999    99999999999999999 999999998654332210         01234555555   7788877764


Q ss_pred             C-cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          151 V-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       151 ~-~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      . ++|+|||++|.                    |+.+    +.++++++++. .+++|++||...++....         
T Consensus        69 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~---------  138 (227)
T PRK08219         69 LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPG---------  138 (227)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCC---------
Confidence            3 48999999983                    1222    45555656554 468999999876654322         


Q ss_pred             CCCCChhHHHHHHHHh----------C-CcEEEEecCeeecCC
Q 025587          206 KPDAGHVQVEKYISEN----------F-SNWASFRPQYMIGSG  237 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~----------~-~~~~ilRp~~i~G~~  237 (250)
                         ...|+..|...+.          . ++++.++||.+.++.
T Consensus       139 ---~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~  178 (227)
T PRK08219        139 ---WGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDM  178 (227)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchH
Confidence               1345555533221          4 899999999887764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.2e-13  Score=116.35  Aligned_cols=145  Identities=17%  Similarity=0.111  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||.+++++|+++|++|++++|++++.+.+.+.    +.. ...++.++.+|   ++++.++++
T Consensus         5 ~~k~~lIt----Gas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   75 (254)
T PRK07478          5 NGKVAIIT----GASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAE----IRA-EGGEAVALAGDVRDEAYAKALVA   75 (254)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEcCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987654432211    000 11234445555   666666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|++||++|.                     |+.    .++.+++.+++.+.++||++||...+....    
T Consensus        76 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----  151 (254)
T PRK07478         76 LAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF----  151 (254)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC----
Confidence            2     258999999983                     222    344556677776778999999976543111    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             +....|+++|...+            .++++++|+||.+-.+.
T Consensus       152 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  194 (254)
T PRK07478        152 -------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM  194 (254)
T ss_pred             -------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcc
Confidence                   01245776664332            25899999999998874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.48  E-value=4.8e-13  Score=117.04  Aligned_cols=145  Identities=17%  Similarity=0.130  Sum_probs=98.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+. .+...+.    + ......+.++.+|   .+++.+++
T Consensus        45 ~~k~iLIt----GasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~----~-~~~~~~~~~~~~Dl~~~~~~~~~~  115 (290)
T PRK06701         45 KGKVALIT----GGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQR----V-EKEGVKCLLIPGDVSDEAFCKDAV  115 (290)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH----H-HhcCCeEEEEEccCCCHHHHHHHH
Confidence            45899999    999999999999999999999999987532 1111000    0 0011234455555   66666665


Q ss_pred             cC-----CcccEEEeCCC---------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG-----VTFDVVLDNNG---------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.     ..+|+|||++|                     .|+.+..++++++.+.  ..++||++||...|......   
T Consensus       116 ~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~---  192 (290)
T PRK06701        116 EETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETL---  192 (290)
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCc---
Confidence            43     25899999998                     2456677777776552  23689999998877553321   


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ..|++.|...            +.+++++.++||.++++..
T Consensus       193 ---------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~  233 (290)
T PRK06701        193 ---------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLI  233 (290)
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccc
Confidence                     3366555322            2269999999999998854

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.48  E-value=2.9e-13  Score=114.49  Aligned_cols=145  Identities=19%  Similarity=0.159  Sum_probs=94.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++++||||    ||+|+||.+++++|+++|++|+++ +|+.+..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus         4 ~~~~ilI~----Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T PRK05565          4 MGKVAIVT----GASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEE----IK-EEGGDAIAVKADVSSEEDVENLV   74 (247)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCeEEEEECCCCCHHHHHHHH
Confidence            46799999    999999999999999999999998 8876543322110    00 011234555555   66666665


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHH----HHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll----~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     .+|+|||++|.                    |+.+..+++    +.+++.+.++||++||...+.....   
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~---  151 (247)
T PRK05565         75 EQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC---  151 (247)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC---
Confidence            421     48999999983                    334444444    4444556778999999765433211   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|..            .+.+++++++|||.+.++..
T Consensus       152 ---------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~  193 (247)
T PRK05565        152 ---------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMW  193 (247)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccc
Confidence                     1346655422            22379999999999976643

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.8e-13  Score=115.48  Aligned_cols=145  Identities=18%  Similarity=0.103  Sum_probs=97.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus         6 ~~k~ilIt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~i~~~~~   76 (253)
T PRK06172          6 SGKVALVT----GGAAGIGRATALAFAREGAKVVVADRDAAGGEETVAL----IR-EAGGEALFVACDVTRDAEVKALVE   76 (253)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987554322111    00 012235555555   566666554


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||++|.                     |+.+.    +.+++.+++.+.+++|++||...+.+...   
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---  153 (253)
T PRK06172         77 QTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK---  153 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC---
Confidence            3     258999999983                     22333    33444555556679999999876654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|...+.            ++++++++||.+-.+..
T Consensus       154 ---------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~  195 (253)
T PRK06172        154 ---------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMF  195 (253)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence                     2457766643322            58999999999977753

>PRK12743 oxidoreductase; Provisional

Probab=99.48  E-value=2.5e-13  Score=116.31  Aligned_cols=146  Identities=16%  Similarity=0.117  Sum_probs=94.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+++||||    ||+|+||++++++|+++|++|+++.++. +..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus         1 ~~k~vlIt----Gas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~   71 (256)
T PRK12743          1 MAQVAIVT----ASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEE----VR-SHGVRAEIRQLDLSDLPEGAQAL   71 (256)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHH
Confidence            46799999    9999999999999999999999887654 222211110    00 012234455555   66665555


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|+|||++|                    .|+.+...+++++.+    .+ .++||++||.....+..   
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~---  148 (256)
T PRK12743         72 DKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP---  148 (256)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC---
Confidence            42     25899999998                    245556666655543    22 36899999965322211   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ....|+..|...+            .+++++.++||.++++...
T Consensus       149 ---------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~  192 (256)
T PRK12743        149 ---------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG  192 (256)
T ss_pred             ---------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc
Confidence                     1245776664322            2699999999999998643

>PRK07985 oxidoreductase; Provisional

Probab=99.47  E-value=3.8e-13  Score=117.95  Aligned_cols=145  Identities=20%  Similarity=0.132  Sum_probs=96.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC--ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      +.|++|||    ||+|+||++++++|+++|++|+++.|+.+  ..+.+.+.    + ......+.++.+|   .+++.++
T Consensus        48 ~~k~vlIT----Gas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~Dl~~~~~~~~~  118 (294)
T PRK07985         48 KDRKALVT----GGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKI----I-EECGRKAVLLPGDLSDEKFARSL  118 (294)
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHH----H-HHcCCeEEEEEccCCCHHHHHHH
Confidence            45899999    99999999999999999999998876542  22211100    0 0011234444554   6666655


Q ss_pred             hcC-----CcccEEEeCCC---------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCc
Q 025587          148 VGG-----VTFDVVLDNNG---------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ++.     ..+|++||++|                     +|+.++..+++++...  ..++||++||...|.....   
T Consensus       119 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~---  195 (294)
T PRK07985        119 VHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH---  195 (294)
T ss_pred             HHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC---
Confidence            542     24899999998                     2456666777776542  2368999999887654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|++.|...            +.++++++|+||.++++..
T Consensus       196 ---------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        196 ---------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence                     14577766332            2379999999999999863

>PLN02253 xanthoxin dehydrogenase

Probab=99.47  E-value=3.6e-13  Score=116.73  Aligned_cols=142  Identities=15%  Similarity=0.078  Sum_probs=94.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|..+..+++.+.    +.  ...++.++.+   |.+++.++++
T Consensus        17 ~~k~~lIt----Gas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         17 LGKVALVT----GGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS----LG--GEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hc--CCCceEEEEeecCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999876543322111    00  0123444444   5777776665


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHhHHHHHHHHH----hCCCCEEEEEcCccc-ccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDAVRPVADWAK----SSGVKQFLFISSAGI-YKPADEP  197 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~v-y~~~~~~  197 (250)
                      .     .++|+|||++|.                      |+.++.++++++.    +.+.+++|+++|... ++...  
T Consensus        87 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--  164 (280)
T PLN02253         87 FTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--  164 (280)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--
Confidence            2     248999999982                      3445555555544    334568999988653 32211  


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                                 ...|++.|...+.            ++++++++||.+.++.
T Consensus       165 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        165 -----------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             -----------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence                       1347766643322            6899999999998874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.47  E-value=3.8e-13  Score=116.48  Aligned_cols=145  Identities=20%  Similarity=0.251  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..|+++||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.. ....+..+.+|   .+++.++++
T Consensus         9 ~~k~vlVt----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~v~~~~~   79 (278)
T PRK08277          9 KGKVAVIT----GGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAE----IKA-AGGEALAVKADVLDKESLEQARQ   79 (278)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCeEEEEECCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999986544332111    000 11234455555   566665554


Q ss_pred             C-----CcccEEEeCCCc-----------------------------------CHHh----HHHHHHHHHhCCCCEEEEE
Q 025587          150 G-----VTFDVVLDNNGK-----------------------------------NLDA----VRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-----------------------------------~~~~----~~~ll~~~~~~~~~~~v~i  185 (250)
                      .     .++|+|||++|.                                   |+.+    ++.+++.+++.+.++||++
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~i  159 (278)
T PRK08277         80 QILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINI  159 (278)
T ss_pred             HHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence            2     258999999983                                   1122    2344556666666899999


Q ss_pred             cCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       186 SS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                      ||...|.+...            ...|++.|...+.            +++++.|+||.+.++..
T Consensus       160 sS~~~~~~~~~------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~  212 (278)
T PRK08277        160 SSMNAFTPLTK------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN  212 (278)
T ss_pred             ccchhcCCCCC------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence            99887654322            2447766643322            69999999999998853

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.47  E-value=4.3e-13  Score=114.59  Aligned_cols=146  Identities=16%  Similarity=0.184  Sum_probs=96.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.+++
T Consensus         9 ~~~k~ilIt----Gas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          9 LAGQVALVT----GSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAA----LR-AAGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987544332110    00 011234445554   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHH----HHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll----~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ++     .++|+|||++|.                    |+.++..++    +.+++.+.++||++||...+.....   
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  156 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG---  156 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC---
Confidence            42     247999999992                    333444444    5555567789999999764432211   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+..|...            ..+++++.|+||.+.++..
T Consensus       157 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~  198 (256)
T PRK06124        157 ---------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETN  198 (256)
T ss_pred             ---------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcch
Confidence                     13466554222            2269999999999999863

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.47  E-value=4.9e-13  Score=113.11  Aligned_cols=142  Identities=16%  Similarity=0.134  Sum_probs=92.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++++|||    ||+|+||++++++|+++|+.|++.+|+.+..+.+...        ....+.++.+|   .+++.++++
T Consensus         5 ~~~~vlIt----Ga~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T PRK12936          5 SGRKALVT----GASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAE--------LGERVKIFPANLSDRDEVKALGQ   72 (245)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999888876554432111        11234444454   666666543


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||++|.                    |+.+..++++++    ++.+.++||++||...+.....    
T Consensus        73 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  148 (245)
T PRK12936         73 KAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG----  148 (245)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC----
Confidence            2     248999999983                    344554555543    3446679999999654332211    


Q ss_pred             CCCCCCCCCChhHHHHH--------H----HHhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKY--------I----SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~--------~----~e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|.        +    ...+++++.++||.+..+..
T Consensus       149 --------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~  190 (245)
T PRK12936        149 --------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMT  190 (245)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchh
Confidence                    123544442        2    22369999999998877643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.47  E-value=6.1e-13  Score=114.44  Aligned_cols=144  Identities=20%  Similarity=0.194  Sum_probs=96.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus         9 ~~k~~lIt----Ga~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~   79 (265)
T PRK07097          9 KGKIALIT----GASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAA----YR-ELGIEAHGYVCDVTDEDGVQAMVS   79 (265)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999887554332111    00 011234445555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHH----HHHHHHHhCCCCEEEEEcCcc-cccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAG-IYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~----~ll~~~~~~~~~~~v~iSS~~-vy~~~~~~~~  199 (250)
                      .     ..+|+|||++|.                    |+.+..    .++..+++.+.++||++||.. .++..     
T Consensus        80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  154 (265)
T PRK07097         80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE-----  154 (265)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC-----
Confidence            3     248999999982                    333433    455555556678999999964 22211     


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|+..|...            +.+++++.|+||.+.++..
T Consensus       155 --------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~  197 (265)
T PRK07097        155 --------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT  197 (265)
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccch
Confidence                    124466666432            2269999999999998854

>PRK08589 short chain dehydrogenase; Validated

Probab=99.47  E-value=3.6e-13  Score=116.51  Aligned_cols=143  Identities=16%  Similarity=0.100  Sum_probs=95.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+ +..+...+.    +.+ ....+..+.+|   .+++.++++
T Consensus         5 ~~k~vlIt----Gas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~----~~~-~~~~~~~~~~Dl~~~~~~~~~~~   74 (272)
T PRK08589          5 ENKVAVIT----GASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDK----IKS-NGGKAKAYHVDISDEQQVKDFAS   74 (272)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHH----HHh-cCCeEEEEEeecCCHHHHHHHHH
Confidence            36799999    999999999999999999999999998 443322111    000 01124444444   666665554


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|++||++|.                     |+.+    ++.+++.+++.+ +++|++||...+.+...   
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~---  150 (272)
T PRK08589         75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLY---  150 (272)
T ss_pred             HHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCC---
Confidence            2     248999999982                     2222    344556666555 79999999765543211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|++.|...+            .+++++.|.||.|..+..
T Consensus       151 ---------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  192 (272)
T PRK08589        151 ---------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLV  192 (272)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchh
Confidence                     245777774332            269999999999988753

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.46  E-value=4.4e-13  Score=114.24  Aligned_cols=144  Identities=15%  Similarity=0.142  Sum_probs=94.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.+ ....+..+.+   |.+++.++++
T Consensus         7 ~~k~vlIt----Gas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~   77 (252)
T PRK07035          7 TGKIALVT----GASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA----IVA-AGGKAEALACHIGEMEQIDALFA   77 (252)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCeEEEEEcCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999986544332111    000 0112333444   4666665554


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHH----HHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~----~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|+|||++|.                     |+.+..    .+++.+++.+.+++|++||...+.+...   
T Consensus        78 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  154 (252)
T PRK07035         78 HIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF---  154 (252)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC---
Confidence            2     148999999982                     233444    4445555666789999999654332211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+.            +++++.+.||.+..+.
T Consensus       155 ---------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~  195 (252)
T PRK07035        155 ---------QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF  195 (252)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence                     2457766644432            6899999999997765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.46  E-value=2.9e-13  Score=114.63  Aligned_cols=145  Identities=14%  Similarity=0.065  Sum_probs=88.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      ++||||    ||+|+||++++++|+++|++|+++ .|+.+..++..+.    +. .....+..+.+|   ++++.++++.
T Consensus         2 ~~~lIt----Ga~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~d~~~i~~~~~~   72 (247)
T PRK09730          2 AIALVT----GGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL----IT-QAGGKAFVLQADISDENQVVAMFTA   72 (247)
T ss_pred             CEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH----HH-hCCCeEEEEEccCCCHHHHHHHHHH
Confidence            689999    999999999999999999999875 4554333221110    00 001224444454   6777766653


Q ss_pred             -----CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhC---CCCEEEEEcCcccccCCCCC
Q 025587          151 -----VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSS---GVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       151 -----~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~---~~~~~v~iSS~~vy~~~~~~  197 (250)
                           ..+|+|||++|.                     |+.++..+++.    +.+.   +.++||++||...+......
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~  152 (247)
T PRK09730         73 IDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE  152 (247)
T ss_pred             HHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc
Confidence                 258999999983                     22333333333    2221   23579999997544322110


Q ss_pred             CccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+..|...            +.+++++++|||.+||+...
T Consensus       153 -----------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        153 -----------YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             -----------ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence                       01245444222            23699999999999999643

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.46  E-value=5.3e-13  Score=113.86  Aligned_cols=144  Identities=20%  Similarity=0.172  Sum_probs=91.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|++|||    ||+|+||++++++|+++|++|++..+ +.+..+.....    +. .....+..+..|   .+++..+++
T Consensus         4 ~k~~lIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   74 (252)
T PRK12747          4 GKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYE----IQ-SNGGSAFSIGANLESLHGVEALYS   74 (252)
T ss_pred             CCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----HH-hcCCceEEEecccCCHHHHHHHHH
Confidence            5899999    99999999999999999999998754 33332221100    00 001122333333   333333221


Q ss_pred             ----------C-CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCC
Q 025587          150 ----------G-VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       150 ----------~-~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~  196 (250)
                                + ..+|+|||+||                    +|+.++..+++++.+.  ..++||++||...+.....
T Consensus        75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  154 (252)
T PRK12747         75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD  154 (252)
T ss_pred             HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC
Confidence                      1 25899999998                    2455666666555441  2359999999876543221


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                  ...|+.+|...+            .+++++.+.||.|.++..
T Consensus       155 ------------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~  196 (252)
T PRK12747        155 ------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN  196 (252)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh
Confidence                        245777774432            269999999999998864

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.45  E-value=1.5e-12  Score=109.97  Aligned_cols=142  Identities=19%  Similarity=0.208  Sum_probs=92.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++||||    ||+|+||++++++|+++|++|+++.|+.+. ...+.+.    +. .....+..+.+|   .+++.++++
T Consensus         5 ~~~vlIt----G~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~   75 (248)
T PRK05557          5 GKVALVT----GASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAE----IG-ALGGKALAVQGDVSDAESVERAVD   75 (248)
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHHH
Confidence            4799999    999999999999999999999998887642 1111000    00 011234454455   666666554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcc-cccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~-vy~~~~~~~~  199 (250)
                      .     .++|+|||++|.                    |+.++.++++++.+    .+.++||++||.. +|+...    
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~----  151 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG----  151 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC----
Confidence            2     248999999982                    34556666666654    4667899999964 333211    


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|...|...            +.++++++++||.+.++.
T Consensus       152 ---------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~  192 (248)
T PRK05557        152 ---------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM  192 (248)
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence                     13455555322            236899999999986654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.45  E-value=2.1e-12  Score=103.60  Aligned_cols=145  Identities=20%  Similarity=0.276  Sum_probs=102.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |||-|+    ||+|.+|++|+++++++||+|++++|++.+....             .++.+++.|   ++.+.+.+.+ 
T Consensus         1 mKIaiI----gAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~g-   62 (211)
T COG2910           1 MKIAII----GASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLAG-   62 (211)
T ss_pred             CeEEEE----ecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhcC-
Confidence            689999    9999999999999999999999999999766531             244445554   7777888888 


Q ss_pred             cccEEEeCCCc--------CHHhHHHHHHHHHhCCCCEEEEEcCccc-ccCCCCCCccCCCCCCCCCChhHHHHHH----
Q 025587          152 TFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHVEGDVVKPDAGHVQVEKYI----  218 (250)
Q Consensus       152 ~~d~Vi~~ag~--------~~~~~~~ll~~~~~~~~~~~v~iSS~~v-y~~~~~~~~~e~~~~~~~~~~y~~~k~~----  218 (250)
                       .|+||+.-+.        ..+....+++..+..++.|++.++.++- |-+....  -.+.+..|. ..|...+..    
T Consensus        63 -~DaVIsA~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~r--LvD~p~fP~-ey~~~A~~~ae~L  138 (211)
T COG2910          63 -HDAVISAFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTR--LVDTPDFPA-EYKPEALAQAEFL  138 (211)
T ss_pred             -CceEEEeccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCce--eecCCCCch-hHHHHHHHHHHHH
Confidence             6999987662        2344666888888889999999988753 3332211  112222222 223322222    


Q ss_pred             ----HHhCCcEEEEecCeeecCCCCCC
Q 025587          219 ----SENFSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       219 ----~e~~~~~~ilRp~~i~G~~~~~~  241 (250)
                          .+..++|+.+-|..+|-|+++.+
T Consensus       139 ~~Lr~~~~l~WTfvSPaa~f~PGerTg  165 (211)
T COG2910         139 DSLRAEKSLDWTFVSPAAFFEPGERTG  165 (211)
T ss_pred             HHHhhccCcceEEeCcHHhcCCccccC
Confidence                23359999999999999987664

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.45  E-value=6.9e-13  Score=118.28  Aligned_cols=145  Identities=20%  Similarity=0.188  Sum_probs=98.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l~~~l~  149 (250)
                      .+++||||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +.. ....+.   .+..|.+++.++++
T Consensus         6 ~~k~vlIT----GAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~----~~~-~g~~~~~~~~Dv~d~~~v~~~~~   76 (330)
T PRK06139          6 HGAVVVIT----GASSGIGQATAEAFARRGARLVLAARDEEALQAVAEE----CRA-LGAEVLVVPTDVTDADQVKALAT   76 (330)
T ss_pred             CCCEEEEc----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHh-cCCcEEEEEeeCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987655432111    000 112233   34445777776664


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++||++|                    +|+.++.+    +++.+++.+.++||++||...+.....    
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~----  152 (330)
T PRK06139         77 QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY----  152 (330)
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC----
Confidence            2     25899999998                    23444444    445556666679999999775543221    


Q ss_pred             CCCCCCCCCChhHHHHHH---------HH---h-CCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI---------SE---N-FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~---------~e---~-~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|..         .|   . +++++.+.||.+.++..
T Consensus       153 --------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~  195 (330)
T PRK06139        153 --------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGF  195 (330)
T ss_pred             --------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccc
Confidence                    2567777742         12   1 58999999999999864

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.45  E-value=6.3e-13  Score=118.05  Aligned_cols=148  Identities=16%  Similarity=0.143  Sum_probs=97.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCC-----H---HHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD-----P---AEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D-----~---~~l  144 (250)
                      ++.++||    ||+|+||++++++|+++|++|++++|+++..+.+.+.    +.... ...+..+..|     .   +.+
T Consensus        53 g~~~lIT----GAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~~~~~~l  124 (320)
T PLN02780         53 GSWALVT----GPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDS----IQSKYSKTQIKTVVVDFSGDIDEGVKRI  124 (320)
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH----HHHHCCCcEEEEEEEECCCCcHHHHHHH
Confidence            5799999    9999999999999999999999999988665543211    00000 1122333333     2   233


Q ss_pred             HhhhcCCcccEEEeCCCc----------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          145 GNVVGGVTFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~----------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .+.+.+.++|++||+||.                      |+.+    ++.+++.+++.+.++||++||...+....   
T Consensus       125 ~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~---  201 (320)
T PLN02780        125 KETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS---  201 (320)
T ss_pred             HHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC---
Confidence            444455457799999982                      3333    44455556566778999999976542110   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                             .|....|+++|...+.            ++++++++||.+-.+...
T Consensus       202 -------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        202 -------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             -------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence                   1123668888744332            699999999999888644

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.44  E-value=7.8e-13  Score=113.41  Aligned_cols=144  Identities=19%  Similarity=0.185  Sum_probs=94.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++++||    ||+|+||++++++|+++|++|++++|+.+..+...+     +. .....+..+.+|   .+++.++++
T Consensus         5 ~~~~~lIt----G~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~-----~~-~~~~~~~~~~~Dl~~~~~v~~~~~   74 (263)
T PRK08226          5 TGKTALIT----GALQGIGEGIARVFARHGANLILLDISPEIEKLADE-----LC-GRGHRCTAVVADVRDPASVAAAIK   74 (263)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHH-----HH-HhCCceEEEECCCCCHHHHHHHHH
Confidence            35899999    999999999999999999999999997632111000     00 011234445555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.+...+++++.    +.+.++||++||.......      
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------  148 (263)
T PRK08226         75 RAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA------  148 (263)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC------
Confidence            3     258999999992                    4556666666543    3456799999985431110      


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                           .+....|+..|...+            .+++++.++||.+.++.
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~  192 (263)
T PRK08226        149 -----DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM  192 (263)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence                 011245766663322            26899999999999875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.44  E-value=9.6e-13  Score=113.04  Aligned_cols=140  Identities=21%  Similarity=0.224  Sum_probs=93.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+.++.+|   .+++.++++
T Consensus         5 ~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   72 (263)
T PRK06200          5 HGQVALIT----GGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQR--------FGDHVLVVEGDVTSYADNQRAVD   72 (263)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hCCcceEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987554432211        11234444454   666666554


Q ss_pred             C-----CcccEEEeCCCc-------------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCC
Q 025587          150 G-----VTFDVVLDNNGK-------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      .     ..+|++||++|.                         |+.+...+++++    ++.+ +++|++||...+.+..
T Consensus        73 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  151 (263)
T PRK06200         73 QTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGG  151 (263)
T ss_pred             HHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCC
Confidence            2     258999999983                         122333344443    3333 6899999987664432


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                      .            ...|+..|...+.           +++++.|.||.+..+.
T Consensus       152 ~------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        152 G------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             C------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence            2            1347766643222           4899999999998774

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.44  E-value=1.4e-12  Score=112.04  Aligned_cols=141  Identities=16%  Similarity=0.183  Sum_probs=92.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++++++||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+..+.+   |.+++.++++
T Consensus         4 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~~   71 (262)
T TIGR03325         4 KGEVVLVT----GGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--------HGDAVVGVEGDVRSLDDHKEAVA   71 (262)
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------cCCceEEEEeccCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987654433211        1122334444   4555655554


Q ss_pred             C-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCC
Q 025587          150 G-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~  195 (250)
                      .     ..+|++||+||.                         |+.++..+++++.+    .+ +++|+++|...+.+..
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~  150 (262)
T TIGR03325        72 RCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNG  150 (262)
T ss_pred             HHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCC
Confidence            2     258999999973                         23334455555433    33 5788888865442211


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                      .            ...|++.|...+.           .++++.|.||.+..+..
T Consensus       151 ~------------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~  192 (262)
T TIGR03325       151 G------------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLR  192 (262)
T ss_pred             C------------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCc
Confidence            1            1457777644332           38899999999988753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.8e-13  Score=114.17  Aligned_cols=146  Identities=16%  Similarity=0.106  Sum_probs=91.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      |++++|||    ||+|+||.+++++|+++|++|+++.++. +....+...    +.. ....+.++.+   |.+++.+++
T Consensus         1 ~~~~~lVt----G~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~~~~~~~~~~   71 (248)
T PRK06123          1 MRKVMIIT----GASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQA----IRR-QGGEALAVAADVADEADVLRLF   71 (248)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHH----HHh-CCCcEEEEEeccCCHHHHHHHH
Confidence            35789999    9999999999999999999988876543 222211000    000 0112334444   466676666


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHhHHHHHHHHHh----CC---CCEEEEEcCccc-ccCC
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDAVRPVADWAKS----SG---VKQFLFISSAGI-YKPA  194 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~----~~---~~~~v~iSS~~v-y~~~  194 (250)
                      +.     ..+|+|||++|.                     |+.++.++++++.+    .+   -++||++||... ++..
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  151 (248)
T PRK06123         72 EAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP  151 (248)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC
Confidence            42     248999999982                     34455555555543    11   247999999754 4322


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ..|+..|...+            .+++++++||+.++|+...
T Consensus       152 ~~~------------~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        152 GEY------------IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             CCc------------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence            110            23665554322            2699999999999999643

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.44  E-value=3.7e-12  Score=109.50  Aligned_cols=132  Identities=18%  Similarity=0.201  Sum_probs=90.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe---CCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~---~D~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....              ..+..+.   .|++++.++++
T Consensus         8 ~~k~vlIt----G~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~   69 (266)
T PRK06171          8 QGKIIIVT----GGSSGIGLAIVKELLANGANVVNADIHGGDGQH--------------ENYQFVPTDVSSAEEVNHTVA   69 (266)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CceEEEEccCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999988754321              1233333   45667766654


Q ss_pred             C-----CcccEEEeCCCc-----------------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccc
Q 025587          150 G-----VTFDVVLDNNGK-----------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIY  191 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-----------------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy  191 (250)
                      .     ..+|+|||++|.                             |+.++..+++++.    +.+.++||++||...+
T Consensus        70 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  149 (266)
T PRK06171         70 EIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGL  149 (266)
T ss_pred             HHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence            3     258999999983                             2233444444443    4455689999997655


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeee
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMI  234 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~  234 (250)
                      .....            ...|+..|...            ..++++++|+||.+.
T Consensus       150 ~~~~~------------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        150 EGSEG------------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             CCCCC------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            33221            24566665332            236999999999885

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.44  E-value=8.5e-13  Score=111.99  Aligned_cols=142  Identities=18%  Similarity=0.119  Sum_probs=92.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      +|.+|||    ||+|+||++++++|+++|++|+++.+.. +.....       +.++.  ...+..+.+|   .+++.++
T Consensus         3 ~k~~lVt----G~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (246)
T PRK12938          3 QRIAYVT----GGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKW-------LEDQKALGFDFIASEGNVGDWDSTKAA   71 (246)
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHH-------HHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            4789999    9999999999999999999998865432 221111       01111  1223334444   6666665


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++.     .++|+|||++|.                    |+.+    ++.+++.+++.+.++||++||........   
T Consensus        72 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  148 (246)
T PRK12938         72 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF---  148 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC---
Confidence            542     258999999983                    2333    44566666667778999999965332211   


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ....|+..|...            ..+++++.++||.+.++..
T Consensus       149 ---------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~  191 (246)
T PRK12938        149 ---------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  191 (246)
T ss_pred             ---------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchh
Confidence                     124566666422            2368999999999998864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.44  E-value=5.8e-13  Score=128.59  Aligned_cols=146  Identities=17%  Similarity=0.150  Sum_probs=101.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+++||    ||+|+||++++++|+++|++|++++|+++..+++.+.    +. .....+.++.+|   .+++.++++
T Consensus       370 ~~k~vlIt----Gas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~~~~~~~  440 (657)
T PRK07201        370 VGKVVLIT----GASSGIGRATAIKVAEAGATVFLVARNGEALDELVAE----IR-AKGGTAHAYTCDLTDSAAVDHTVK  440 (657)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHHHH
Confidence            46799999    9999999999999999999999999987654432111    00 011234444454   777776665


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     ..+|+|||+||.                      |+.++    +.+++.+++.+.++||++||.+.|.....  
T Consensus       441 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  518 (657)
T PRK07201        441 DILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR--  518 (657)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--
Confidence            2     148999999983                      22233    33455556667789999999887764322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                ...|+++|...+            .++++++++||.|.++...
T Consensus       519 ----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        519 ----------FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             ----------cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence                      255777774332            2699999999999988654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.44  E-value=1.3e-12  Score=111.71  Aligned_cols=142  Identities=16%  Similarity=0.196  Sum_probs=93.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+++||++++++|+++|++|++++|....  ...+    .+. ....++..+.+|   .+++.++++
T Consensus         7 ~~k~~lIt----Gas~gIG~aia~~l~~~G~~vv~~~~~~~~--~~~~----~~~-~~~~~~~~~~~Dl~~~~~~~~~~~   75 (251)
T PRK12481          7 NGKVAIIT----GCNTGLGQGMAIGLAKAGADIVGVGVAEAP--ETQA----QVE-ALGRKFHFITADLIQQKDIDSIVS   75 (251)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCchHH--HHHH----HHH-HcCCeEEEEEeCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999998886421  1000    000 011234444444   777776665


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHH----HHHHhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVA----DWAKSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll----~~~~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||++|                    +|+.+...+.    +.+++.+ .++||++||...+.+...   
T Consensus        76 ~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---  152 (251)
T PRK12481         76 QAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR---  152 (251)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---
Confidence            3     25899999998                    2444444444    4444433 469999999876643221   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+.+|...            ..+++++.++||.+-.+.
T Consensus       153 ---------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~  193 (251)
T PRK12481        153 ---------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN  193 (251)
T ss_pred             ---------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence                     13466666332            237999999999997764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.43  E-value=2.4e-12  Score=108.77  Aligned_cols=138  Identities=19%  Similarity=0.231  Sum_probs=90.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|++|||    ||+|+||++++++|+++|++|++++|+++....          .+...++..+.+|   .+++.++++
T Consensus         1 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~~~~~D~~~~~~~~~~~~   66 (236)
T PRK06483          1 MPAPILIT----GAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID----------GLRQAGAQCIQADFSTNAGIMAFID   66 (236)
T ss_pred             CCceEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH----------HHHHcCCEEEEcCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999997643211          1111234444444   666665553


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     ..+|++||++|.                    |+.+    ++.+++.+++.+  .+++|++||........   
T Consensus        67 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---  143 (236)
T PRK06483         67 ELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD---  143 (236)
T ss_pred             HHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC---
Confidence            3     148999999982                    2223    234445555544  46899999865332111   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGS  236 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~  236 (250)
                               ....|+.+|...+.           +++++.|+||.+...
T Consensus       144 ---------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~  183 (236)
T PRK06483        144 ---------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFN  183 (236)
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecC
Confidence                     12458877744332           489999999988543

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2.2e-12  Score=110.34  Aligned_cols=147  Identities=16%  Similarity=0.163  Sum_probs=95.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..|++|||    ||+|+||++++++|+++|++|++++|+.+. .+.+.+.    +.. ....+..+.+|   ++++.+++
T Consensus         7 ~~k~~lVt----G~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~i~~~~   77 (254)
T PRK06114          7 DGQVAFVT----GAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEH----IEA-AGRRAIQIAADVTSKADLRAAV   77 (254)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHH----HHh-cCCceEEEEcCCCCHHHHHHHH
Confidence            35799999    999999999999999999999999987532 2211100    000 01223344444   66666655


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||++|.                    |+.+.    +.+++.+++.+.++||++||...+......  
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  155 (254)
T PRK06114         78 ARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL--  155 (254)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC--
Confidence            43     248999999982                    34444    444555555666799999997644322110  


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|..+|...            ..++++++++||.+.++..
T Consensus       156 --------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~  198 (254)
T PRK06114        156 --------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMN  198 (254)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccc
Confidence                    014577666422            2369999999999988864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.43  E-value=5.7e-12  Score=106.17  Aligned_cols=137  Identities=15%  Similarity=0.113  Sum_probs=92.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHH-HHhhhcC-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGG-  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~-l~~~l~~-  150 (250)
                      +.|+++||    ||+|+||++++++|+++|++|++++|+.+...              ..++..+.+|..+ ++++++. 
T Consensus         4 ~~k~~lVt----Gas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~   65 (235)
T PRK06550          4 MTKTVLIT----GAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDDLEPLFDWV   65 (235)
T ss_pred             CCCEEEEc----CCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHHHHHHHHhh
Confidence            45799999    99999999999999999999999998753211              1235566667322 3444432 


Q ss_pred             CcccEEEeCCCc---------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          151 VTFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       151 ~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      ..+|+|||++|.                     |+.++.++++++.    +.+.++||++||...+.....         
T Consensus        66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  136 (235)
T PRK06550         66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG---------  136 (235)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC---------
Confidence            248999999982                     3445555555543    445578999999765433211         


Q ss_pred             CCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          206 KPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       206 ~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                         ...|+..|..            .+.++++++++||.+.++...
T Consensus       137 ---~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        137 ---GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence               1335555532            223799999999999888643

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.1e-12  Score=115.02  Aligned_cols=143  Identities=18%  Similarity=0.097  Sum_probs=98.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCce---EEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGK---TVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~---~v~~D~~~l~~~l  148 (250)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +. ...+.   .+..|.+++.+++
T Consensus         8 ~gk~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~-------l~~~~~~~~~~~Dv~d~~~v~~~~   76 (296)
T PRK05872          8 AGKVVVVT----GAARGIGAELARRLHARGAKLALVDLEEAELAALAAE-------LGGDDRVLTVVADVTDLAAMQAAA   76 (296)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------hcCCCcEEEEEecCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987654432211       10 11222   3444567666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.     ..+|+|||++|.                    |+.++.++++++..   .+.++||++||...+.....    
T Consensus        77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  152 (296)
T PRK05872         77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG----  152 (296)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC----
Confidence            42     258999999992                    45555555555432   12368999999876644322    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...+            .+++++++.||.+.++..
T Consensus       153 --------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  194 (296)
T PRK05872        153 --------MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLV  194 (296)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhh
Confidence                    256887774332            369999999999987753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.43  E-value=9.2e-13  Score=111.20  Aligned_cols=144  Identities=21%  Similarity=0.222  Sum_probs=93.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |++|||    ||+|+||++++++|+++|++|+++.|+. +..+++.+.    . ......+..+.+|   ++++.++++.
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (242)
T TIGR01829         1 RIALVT----GGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE----Q-GALGFDFRVVEGDVSSFESCKAAVAK   71 (242)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----H-HhhCCceEEEEecCCCHHHHHHHHHH
Confidence            579999    9999999999999999999999998832 222211100    0 0011234455555   6666655542


Q ss_pred             -----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|.                    |+.+    ++.++..+++.+.++||++||.........     
T Consensus        72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-----  146 (242)
T TIGR01829        72 VEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG-----  146 (242)
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-----
Confidence                 248999999982                    2333    333566666777889999999643322111     


Q ss_pred             CCCCCCCCChhHHHHH--------H----HHhCCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKY--------I----SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~--------~----~e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|...|.        +    ...+++++.++||.+.++...
T Consensus       147 -------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  189 (242)
T TIGR01829       147 -------QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM  189 (242)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc
Confidence                   144666653        1    123699999999999988643

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.43  E-value=1.5e-12  Score=110.47  Aligned_cols=143  Identities=17%  Similarity=0.144  Sum_probs=93.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|||    ||+|+||++++++|+++|++|+++.+.. +..+++.+.    +.+ ...++.++.+|   ++.+.++++
T Consensus         6 ~~~~lIt----G~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~~   76 (247)
T PRK12935          6 GKVAIVT----GGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNE----LGK-EGHDVYAVQADVSKVEDANRLVE   76 (247)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHH----HHh-cCCeEEEEECCCCCHHHHHHHHH
Confidence            5899999    9999999999999999999998765543 222211100    000 11234455555   667766665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|+|||++|.                    |+.++..+++++..    .+.++||++||...+.....    
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  152 (247)
T PRK12935         77 EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG----  152 (247)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC----
Confidence            4     258999999982                    44556666666543    44579999999654322111    


Q ss_pred             CCCCCCCCCChhHHHHHHH---------H---hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e---~~~~~~ilRp~~i~G~~  237 (250)
                              ...|+..|...         |   .++++++++||.+.++.
T Consensus       153 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  193 (247)
T PRK12935        153 --------QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM  193 (247)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence                    24577666422         1   26899999999998764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.43  E-value=1.3e-12  Score=111.81  Aligned_cols=144  Identities=15%  Similarity=0.168  Sum_probs=96.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+...    +. ....++.++.+|   .+++.++++
T Consensus        10 ~~k~vlVt----G~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113         10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDE----IQ-QLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999876544322111    00 001233344444   666666544


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     ..+|+|||++|.                   |+.+..++++++.    +.+.++||++||.....+...     
T Consensus        81 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  155 (255)
T PRK06113         81 FALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN-----  155 (255)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCC-----
Confidence            2     258999999982                   4556666666664    344569999999764322111     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                             ...|++.|...+.            +++++++.||.+..+.
T Consensus       156 -------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~  196 (255)
T PRK06113        156 -------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_pred             -------cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence                   2457766644332            5899999999998765

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.43  E-value=5.4e-13  Score=113.63  Aligned_cols=148  Identities=21%  Similarity=0.290  Sum_probs=110.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .+..+-|.    |||||+|++++.+|.+.|.+|++--|.++. ..+++-.  ..+.++  .-..+..-|++++.++++..
T Consensus        60 sGiVaTVF----GAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvm--GdLGQv--l~~~fd~~DedSIr~vvk~s  131 (391)
T KOG2865|consen   60 SGIVATVF----GATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVM--GDLGQV--LFMKFDLRDEDSIRAVVKHS  131 (391)
T ss_pred             cceEEEEe----cccccccHHHHHHHhhcCCeEEEeccCCccchhheeec--ccccce--eeeccCCCCHHHHHHHHHhC
Confidence            35677899    999999999999999999999999998743 2222110  111110  01223345799999999984


Q ss_pred             cccEEEeCCC------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHH
Q 025587          152 TFDVVLDNNG------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (250)
Q Consensus       152 ~~d~Vi~~ag------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~  219 (250)
                        ++|||+.|            +|+.+...++..|+++|+.|||++|..+..-         ..+.....+++..|+...
T Consensus       132 --NVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv---------~s~Sr~LrsK~~gE~aVr  200 (391)
T KOG2865|consen  132 --NVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV---------KSPSRMLRSKAAGEEAVR  200 (391)
T ss_pred             --cEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccc---------cChHHHHHhhhhhHHHHH
Confidence              99999999            4678899999999999999999999877221         111122247788888888


Q ss_pred             HhCCcEEEEecCeeecCCCC
Q 025587          220 ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       220 e~~~~~~ilRp~~i~G~~~~  239 (250)
                      +.+=+.+|+||..|||..++
T Consensus       201 dafPeAtIirPa~iyG~eDr  220 (391)
T KOG2865|consen  201 DAFPEATIIRPADIYGTEDR  220 (391)
T ss_pred             hhCCcceeechhhhcccchh
Confidence            88889999999999999664

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.43  E-value=1.4e-12  Score=110.91  Aligned_cols=145  Identities=17%  Similarity=0.139  Sum_probs=92.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-----CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-----DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-----D~~~l~~~  147 (250)
                      +.++||||    ||+|+||.+++++|+++|++|++++|+.+..+.+.+.    +.......+.++.+     |.+++.++
T Consensus        11 ~~k~vlIt----G~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945         11 KDRIILVT----GAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDE----IEAAGGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH----HHhcCCCCceEEEecccCCCHHHHHHH
Confidence            56899999    9999999999999999999999999987544332110    00001112333333     33444333


Q ss_pred             hcC-----CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|+|||++|.                     |+.++.+++++    +++.+.++||++||...+..... 
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-  161 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN-  161 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC-
Confidence            321     248999999972                     34454444444    45567889999999754432211 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                                 ...|+.+|...+.            ++++++++||.+-++.
T Consensus       162 -----------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~  202 (247)
T PRK08945        162 -----------WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM  202 (247)
T ss_pred             -----------CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence                       1347766643332            5889999999987663

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.1e-12  Score=113.03  Aligned_cols=144  Identities=21%  Similarity=0.203  Sum_probs=95.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++++||||    ||+|+||.+++++|+++|++|++++|+.+..+...+.    +. ....++.++.+|   ++++.+++
T Consensus         7 ~~~k~ilIt----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~i~~~~   77 (264)
T PRK07576          7 FAGKNVVVV----GGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQ----LQ-QAGPEGLGVSADVRDYAAVEAAF   77 (264)
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-HhCCceEEEECCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987544322110    00 011223344444   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC---CCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.     ..+|+|||++|                    +|+.++.++++++...   ..++||++||...+....     
T Consensus        78 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~-----  152 (264)
T PRK07576         78 AQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP-----  152 (264)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC-----
Confidence            43     24899999997                    3566666766665431   226999999976442211     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~  236 (250)
                             ....|+..|...+            .+++++.++||.+.+.
T Consensus       153 -------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t  193 (264)
T PRK07576        153 -------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT  193 (264)
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence                   1256777774322            2589999999998753

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.1e-12  Score=111.89  Aligned_cols=142  Identities=19%  Similarity=0.189  Sum_probs=92.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.. ....+.++.+|   ++++.++++.
T Consensus         1 ~k~~lIt----G~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~   71 (252)
T PRK07677          1 EKVVIIT----GGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLE----IEQ-FPGQVLTVQMDVRNPEDVQKMVEQ   71 (252)
T ss_pred             CCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCcEEEEEecCCCHHHHHHHHHH
Confidence            3789999    9999999999999999999999999987544332111    000 11234444444   6666665542


Q ss_pred             -----CcccEEEeCCC--------------------cCHHhHHHHHHHHH----hCC-CCEEEEEcCcccccCCCCCCcc
Q 025587          151 -----VTFDVVLDNNG--------------------KNLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 -----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~----~~~-~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                           ..+|+|||++|                    .|+.+..++++++.    +.+ .++||++||...+.+...    
T Consensus        72 ~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----  147 (252)
T PRK07677         72 IDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG----  147 (252)
T ss_pred             HHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC----
Confidence                 25899999998                    23455566666653    322 468999998754332111    


Q ss_pred             CCCCCCCCCChhHHHHHH---------HH----hCCcEEEEecCeeecC
Q 025587          201 EGDVVKPDAGHVQVEKYI---------SE----NFSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~---------~e----~~~~~~ilRp~~i~G~  236 (250)
                              ...|+..|..         .|    .+++++.++||.+.+.
T Consensus       148 --------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        148 --------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             --------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence                    1345555522         11    3689999999999854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.42  E-value=1.4e-12  Score=111.51  Aligned_cols=149  Identities=14%  Similarity=0.065  Sum_probs=95.7

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCc--c-cch--hcCCceEEeCC---H
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNR--F-NEI--VSAGGKTVWGD---P  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~--~-~~~--~~~~v~~v~~D---~  141 (250)
                      ++++||||    ||+|  .||.+++++|+++|++|++++|++...+ .........  + .++  ....+.++.+|   .
T Consensus         4 ~~k~vlIt----Gas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   79 (256)
T PRK12748          4 MKKIALVT----GASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQP   79 (256)
T ss_pred             CCcEEEEe----CCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            45789999    9995  7999999999999999999998731110 000000000  0 001  11235556666   5


Q ss_pred             HHHHhhhcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCccccc
Q 025587          142 AEVGNVVGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYK  192 (250)
Q Consensus       142 ~~l~~~l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~  192 (250)
                      +++..+++.     ..+|+|||++|                    .|+.++..+++++..    .+.++||++||...+.
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            555555432     25899999998                    245667777766643    3456999999987665


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                      +...            ...|+..|...+.            +++++.++||.+..+.
T Consensus       160 ~~~~------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        160 PMPD------------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW  204 (256)
T ss_pred             CCCC------------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence            4321            1457766644332            6899999999987764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.8e-12  Score=109.65  Aligned_cols=146  Identities=16%  Similarity=0.111  Sum_probs=90.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-----HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-----~~~l~~~l  148 (250)
                      +++|+||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.......+..+..|     .+++.+++
T Consensus         6 ~k~vlIt----G~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          6 DKTILVT----GASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA----IVEAGHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH----HHHcCCCCcceEEeeecccchHHHHHHH
Confidence            5799999    9999999999999999999999999988654432110    000001112222222     23333332


Q ss_pred             c----C--CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          149 G----G--VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~----~--~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +    .  ..+|+|||++|.                     |+.+..++++++    ++.+.+++|++||.....+.   
T Consensus        78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---  154 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK---  154 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC---
Confidence            1    1  248999999982                     344444444444    44556799999985432111   


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh-------------CCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN-------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~-------------~~~~~ilRp~~i~G~~~~  239 (250)
                               +....|++.|...+.             ++++++++||.|+++...
T Consensus       155 ---------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~  200 (239)
T PRK08703        155 ---------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI  200 (239)
T ss_pred             ---------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc
Confidence                     111346666643322             488999999999999643

>PRK12742 oxidoreductase; Provisional

Probab=99.42  E-value=3e-12  Score=107.97  Aligned_cols=141  Identities=21%  Similarity=0.257  Sum_probs=90.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++.|+. +..+.+.+          ..++..+..|   .+.+.+.+
T Consensus         5 ~~k~vlIt----GasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----------~~~~~~~~~D~~~~~~~~~~~   70 (237)
T PRK12742          5 TGKKVLVL----GGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----------ETGATAVQTDSADRDAVIDVV   70 (237)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH----------HhCCeEEecCCCCHHHHHHHH
Confidence            35899999    9999999999999999999998887643 22222111          1123344444   56666666


Q ss_pred             cC-CcccEEEeCCCc--------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          149 GG-VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       149 ~~-~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      +. ..+|++||++|.                    |+.+...++..+.+.  ..+++|++||......    +.      
T Consensus        71 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~------  140 (237)
T PRK12742         71 RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM----PV------  140 (237)
T ss_pred             HHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC----CC------
Confidence            53 248999999982                    344455554443331  2468999999653211    10      


Q ss_pred             CCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          206 KPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                       +....|+..|...+            .++++++|+||.+..+..
T Consensus       141 -~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~  184 (237)
T PRK12742        141 -AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDAN  184 (237)
T ss_pred             -CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcc
Confidence             11244666664333            269999999999988753

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.3e-12  Score=112.96  Aligned_cols=144  Identities=15%  Similarity=0.080  Sum_probs=92.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCc---eEEeCCHHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG---KTVWGDPAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v---~~v~~D~~~l~~~l~~-  150 (250)
                      |+++||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+   ..+..|++++.++++. 
T Consensus         1 k~vlIt----Gas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (272)
T PRK07832          1 KRCFVT----GAASGIGRATALRLAAQGAELFLTDRDADGLAQTVAD----ARALGGTVPEHRALDISDYDAVAAFAADI   72 (272)
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhcCCCcceEEEeeCCCHHHHHHHHHHH
Confidence            479999    9999999999999999999999999976543322110    000001112   2344456666555442 


Q ss_pred             ----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hC-CCCEEEEEcCcccccCCCCCCccC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SS-GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~-~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                          ..+|+|||++|.                    |+.+...+++++.    +. ..++||++||...+.+..      
T Consensus        73 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~------  146 (272)
T PRK07832         73 HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP------  146 (272)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC------
Confidence                248999999982                    4455566666643    32 246899999975432211      


Q ss_pred             CCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                            ....|+..|.            +...++++++++||.+.++..
T Consensus       147 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~  189 (272)
T PRK07832        147 ------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV  189 (272)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence                  1234666553            123369999999999998853

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.1e-12  Score=111.10  Aligned_cols=144  Identities=20%  Similarity=0.211  Sum_probs=94.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +.++||||    ||+|+||++++++|+++|++|+++.|+.+.. +.+.+.    +. .....+.++.+|   .+++.+++
T Consensus         4 ~~~~vlIt----G~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          4 SNKVAIVT----GASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAE----IE-AAGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH----HH-hcCCeEEEEECCCCCHHHHHHHH
Confidence            45799999    9999999999999999999999887765321 111000    00 012234455555   66666666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.     .++|+|||++|.                    |+.+..++++++.+.  ..++||++||...+.+...     
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~-----  149 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPG-----  149 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCC-----
Confidence            53     258999999982                    445566666666542  2358999998765433211     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|...+            .++++++++||.+.++.
T Consensus       150 -------~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~  190 (245)
T PRK12937        150 -------YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATEL  190 (245)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence                   245666664432            25899999999887765

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=2.5e-12  Score=109.31  Aligned_cols=141  Identities=13%  Similarity=0.150  Sum_probs=92.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||+|+||++++++|+++|++|+++.++. +..+.+..        .....+.++.+|   ++++.+++
T Consensus         4 ~~k~ilIt----Gas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~   71 (253)
T PRK08642          4 SEQTVLVT----GGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALAD--------ELGDRAIALQADVTDREQVQAMF   71 (253)
T ss_pred             CCCEEEEe----CCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH--------HhCCceEEEEcCCCCHHHHHHHH
Confidence            35799999    9999999999999999999999876543 22221110        011234455555   66676666


Q ss_pred             cCC------cccEEEeCCCc--------------------------CHHhHHHHHHHHH----hCCCCEEEEEcCccccc
Q 025587          149 GGV------TFDVVLDNNGK--------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYK  192 (250)
Q Consensus       149 ~~~------~~d~Vi~~ag~--------------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~  192 (250)
                      +..      .+|+|||++|.                          |+.+..++++++.    +.+.+++|++||...+.
T Consensus        72 ~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~  151 (253)
T PRK08642         72 ATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN  151 (253)
T ss_pred             HHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence            531      38999999863                          2444555555553    45567999999854322


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                      +.           .+ ...|+..|...+.            +++++.|+||.+..+.
T Consensus       152 ~~-----------~~-~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~  196 (253)
T PRK08642        152 PV-----------VP-YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTD  196 (253)
T ss_pred             CC-----------CC-ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCch
Confidence            11           11 1457777644332            5899999999997763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.41  E-value=1e-12  Score=111.58  Aligned_cols=145  Identities=19%  Similarity=0.125  Sum_probs=89.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+|+||||    ||+|+||..++++|+++|++|+++.+ +.+..+.+...    .. ....++..+.+|   .+++.+++
T Consensus         1 m~k~ilIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~   71 (248)
T PRK06947          1 MRKVVLIT----GASRGIGRATAVLAAARGWSVGINYARDAAAAEETADA----VR-AAGGRACVVAGDVANEADVIAMF   71 (248)
T ss_pred             CCcEEEEe----CCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HH-hcCCcEEEEEeccCCHHHHHHHH
Confidence            56899999    99999999999999999999987754 43332221100    00 011234455555   56665554


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHhHHHHHHHHHh----CC---CCEEEEEcCccc-ccCC
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDAVRPVADWAKS----SG---VKQFLFISSAGI-YKPA  194 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~----~~---~~~~v~iSS~~v-y~~~  194 (250)
                      +.     .++|+|||++|.                     |+.+...+++.+.+    .+   -.+||++||... ++..
T Consensus        72 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~  151 (248)
T PRK06947         72 DAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP  151 (248)
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC
Confidence            32     248999999982                     33444455433222    21   246999998654 3322


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ...            ..|+.+|...+            .+++++++|||.+.++..
T Consensus       152 ~~~------------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~  195 (248)
T PRK06947        152 NEY------------VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIH  195 (248)
T ss_pred             CCC------------cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccc
Confidence            110            23555554322            269999999999998853

>PRK05855 short chain dehydrogenase; Validated

Probab=99.41  E-value=1.5e-12  Score=123.22  Aligned_cols=144  Identities=17%  Similarity=0.144  Sum_probs=99.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..+++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. ....++.++.+|   ++++.++++
T Consensus       314 ~~~~~lv~----G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~~~~~~~  384 (582)
T PRK05855        314 SGKLVVVT----GAGSGIGRETALAFAREGAEVVASDIDEAAAERTAEL----IR-AAGAVAHAYRVDVSDADAMEAFAE  384 (582)
T ss_pred             CCCEEEEE----CCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEEcCCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999987554432111    00 011234455555   666666664


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHH----HHhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|+|||+||                    +|+.++.+++++    +++.+ .++||++||...|.....   
T Consensus       385 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---  461 (582)
T PRK05855        385 WVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS---  461 (582)
T ss_pred             HHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC---
Confidence            3     24899999999                    245555555544    44444 369999999887765332   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .++++++++||.|-.+.
T Consensus       462 ---------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        462 ---------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             ---------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence                     256887775332            26999999999997764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.41  E-value=1.2e-12  Score=115.75  Aligned_cols=156  Identities=13%  Similarity=0.007  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+++||    ||+++||++++++|+++|++|+++.|+.++.++..+.    +... ....+.++.+|   .+++.+++
T Consensus        13 ~gk~~lIT----Gas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~~sv~~~~   84 (313)
T PRK05854         13 SGKRAVVT----GASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAA----IRTAVPDAKLSLRALDLSSLASVAALG   84 (313)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhCCCCceEEEEecCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322111    0000 11234455555   66666554


Q ss_pred             cC-----CcccEEEeCCCc-------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccC-CCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~-------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~-~~~~~~  199 (250)
                      +.     ..+|++||+||.                   |+.+    +..+++.+++. ..++|++||...+.. ....++
T Consensus        85 ~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~  163 (313)
T PRK05854         85 EQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDL  163 (313)
T ss_pred             HHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccc
Confidence            32     258999999982                   3444    33444444443 468999999764332 221222


Q ss_pred             cCCCCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~~  238 (250)
                      .+.....+ ...|+.+|...+              .+++++.+.||.|..+..
T Consensus       164 ~~~~~~~~-~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        164 NWERSYAG-MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             cccccCcc-hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcc
Confidence            22222222 256887773321              258999999999977653

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.40  E-value=7.6e-12  Score=99.78  Aligned_cols=149  Identities=20%  Similarity=0.162  Sum_probs=110.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .+|.++|.    ||||-+|+.+++++++.+  .+|+++.|.+. .+           ......+.....|.+.|.+....
T Consensus        17 q~~s~fvl----GAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-~d-----------~at~k~v~q~~vDf~Kl~~~a~~   80 (238)
T KOG4039|consen   17 QNMSGFVL----GATGLCGGGLLKHAQEAPQFSKVYAILRREL-PD-----------PATDKVVAQVEVDFSKLSQLATN   80 (238)
T ss_pred             hccceEEE----eccccccHHHHHHHHhcccceeEEEEEeccC-CC-----------ccccceeeeEEechHHHHHHHhh
Confidence            45789999    999999999999999998  68999998751 11           11233455556675555555432


Q ss_pred             -CcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH
Q 025587          151 -VTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (250)
Q Consensus       151 -~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k  216 (250)
                       ..+|+.+.+-|             ++-+....+.+++++.|+++|+++||.+......-         .....+-.+|+
T Consensus        81 ~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF---------lY~k~KGEvE~  151 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF---------LYMKMKGEVER  151 (238)
T ss_pred             hcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce---------eeeeccchhhh
Confidence             23899998876             45677889999999999999999999885433221         11125556888


Q ss_pred             HHHHhCC-cEEEEecCeeecCCCCCCccccc
Q 025587          217 YISENFS-NWASFRPQYMIGSGNNKDCEEWF  246 (250)
Q Consensus       217 ~~~e~~~-~~~ilRp~~i~G~~~~~~~~~~~  246 (250)
                      -..|..+ +++|+|||.+.|.+.+....+|.
T Consensus       152 ~v~eL~F~~~~i~RPG~ll~~R~esr~gefl  182 (238)
T KOG4039|consen  152 DVIELDFKHIIILRPGPLLGERTESRQGEFL  182 (238)
T ss_pred             hhhhccccEEEEecCcceecccccccccchh
Confidence            8888764 69999999999999888776664

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.40  E-value=3.2e-12  Score=109.49  Aligned_cols=144  Identities=16%  Similarity=0.171  Sum_probs=94.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||+|+||++++++|+++|++|+++.+.. +..+.+.+.    +. .....+.++.+|   .+++.+++
T Consensus         8 ~~k~vlIt----Gas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          8 APRAALVT----GAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAE----IR-ALGRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HH-hcCCeEEEEEcCCCCHHHHHHHH
Confidence            46799999    9999999999999999999999887753 222211100    00 012234455555   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     ..+|+|||++|                    .|+.++..+++++..    .+.+++|++++...+.+..    
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----  154 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----  154 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----
Confidence            42     24899999998                    256666777766554    2346888888765443321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                              ....|+..|...+.           .+++++++||.++...
T Consensus       155 --------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~  195 (258)
T PRK09134        155 --------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG  195 (258)
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence                    12458877743322           3889999999987653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2e-12  Score=110.61  Aligned_cols=144  Identities=18%  Similarity=0.161  Sum_probs=89.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++.+..+......+.   ...++  ....+.++.+|   ++++.++
T Consensus         7 ~~k~vlIt----Ga~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~D~~~~~~~~~~   79 (257)
T PRK12744          7 KGKVVLIA----GGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEE---TVAAVKAAGAKAVAFQADLTTAAAVEKL   79 (257)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHH---HHHHHHHhCCcEEEEecCcCCHHHHHHH
Confidence            45799999    9999999999999999999988887654221110000   00001  11234445555   6677666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEE-cCc-ccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFI-SSA-GIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~i-SS~-~vy~~~~~~~  198 (250)
                      +..     .++|++||++|                    +|+.++..+++++.+.  ..++++++ ||. +.+.+     
T Consensus        80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~-----  154 (257)
T PRK12744         80 FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP-----  154 (257)
T ss_pred             HHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC-----
Confidence            542     25899999999                    2566666677776542  12466665 332 32221     


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ....|+.+|...+.            +++++.++||.+.++.
T Consensus       155 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        155 ---------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             ---------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence                     11346655533322            5899999999998764

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.40  E-value=2.1e-12  Score=110.50  Aligned_cols=145  Identities=17%  Similarity=0.139  Sum_probs=96.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +.|+|+||    ||+|+||+.++++|+++|++ |++++|+.+......+.    +. .....+.++.+|   ++++.+++
T Consensus         5 ~~k~vlIt----Ga~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~   75 (260)
T PRK06198          5 DGKVALVT----GGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAE----LE-ALGAKAVFVQADLSDVEDCRRVV   75 (260)
T ss_pred             CCcEEEEe----CCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHH----HH-hcCCeEEEEEccCCCHHHHHHHH
Confidence            45789999    99999999999999999999 99999976543321100    00 011233344444   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     ..+|+|||++|.                    |+.+..++++++.    +.+ .+++|++||...++....  
T Consensus        76 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--  153 (260)
T PRK06198         76 AAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF--  153 (260)
T ss_pred             HHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC--
Confidence            43     148999999982                    3445555555543    332 468999999877654321  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+..|...+.            +++++.++||.++++..
T Consensus       154 ----------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        154 ----------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             ----------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence                      1457766643322            48899999999999864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=4.4e-12  Score=107.76  Aligned_cols=142  Identities=17%  Similarity=0.140  Sum_probs=92.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      +++||||    ||+|+||++++++|+++|++|++..|.. +......       ..+.  ...+..+.+|   ++++.++
T Consensus         6 ~~~vlit----Gasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~~   74 (252)
T PRK06077          6 DKVVVVT----GSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL-------KMVKENGGEGIGVLADVSTREGCETL   74 (252)
T ss_pred             CcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH-------HHHHHcCCeeEEEEeccCCHHHHHHH
Confidence            4799999    9999999999999999999998877653 2111100       0011  1122333444   5655555


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ++.     ..+|+|||++|.                    |+.+..++++++.+.  ..++||++||...|.+...    
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  150 (252)
T PRK06077         75 AKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG----  150 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC----
Confidence            442     258999999982                    344555556655542  2358999999887654222    


Q ss_pred             CCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...+.           ++++.+++||.+.++..
T Consensus       151 --------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~  191 (252)
T PRK06077        151 --------LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLG  191 (252)
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence                    2568877744332           58899999999988753

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.6e-12  Score=110.31  Aligned_cols=144  Identities=17%  Similarity=0.129  Sum_probs=95.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+..      .....+.++.+|   ++++.++++
T Consensus         4 ~~~~vlIt----G~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~D~~d~~~~~~~~~   73 (263)
T PRK09072          4 KDKRVLLT----GASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL------PYPGRHRWVVADLTSEAGREAVLA   73 (263)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH------hcCCceEEEEccCCCHHHHHHHHH
Confidence            35789999    99999999999999999999999999875544321110      011234444454   666655543


Q ss_pred             C----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .    ..+|+|||++|.                    |+.++.++++.+.    +.+.+++|++||...+....      
T Consensus        74 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  147 (263)
T PRK09072         74 RAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP------  147 (263)
T ss_pred             HHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC------
Confidence            2    248999999982                    4455565565554    34557899998864332211      


Q ss_pred             CCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                            ....|+..|...            +.+++++.+.||.+.++..
T Consensus       148 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~  190 (263)
T PRK09072        148 ------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMN  190 (263)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccch
Confidence                  124577776432            2258899999999977653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.39  E-value=2.6e-12  Score=120.85  Aligned_cols=142  Identities=19%  Similarity=0.180  Sum_probs=99.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCC---ceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG---GKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~---v~~v~~D~~~l~~~l~  149 (250)
                      .+|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....   +..+..|++++.++++
T Consensus       268 ~~k~~lIt----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~  335 (520)
T PRK06484        268 SPRVVAIT----GGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEA--------LGDEHLSVQADITDEAAVESAFA  335 (520)
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hCCceeEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554433211        1112   2334445777776664


Q ss_pred             C-----CcccEEEeCCC---------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNG---------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     ..+|++|||||                     +|+.++.++++++..  .+.++||++||...+.....     
T Consensus       336 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  410 (520)
T PRK06484        336 QIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP-----  410 (520)
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC-----
Confidence            3     25899999998                     245566666665544  23468999999765543221     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|++.|...+            .+++++.|+||.|.++..
T Consensus       411 -------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  452 (520)
T PRK06484        411 -------RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAV  452 (520)
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchh
Confidence                   255777774333            269999999999988753

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.39  E-value=3e-12  Score=109.32  Aligned_cols=147  Identities=20%  Similarity=0.173  Sum_probs=94.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.. ....+..+.+|   ++++.++++
T Consensus         8 ~~k~vlVt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          8 HGKRALIT----GASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADE----IGT-SGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHh-cCCeEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432211    000 11234444454   666666654


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||++|                    .|+.+...+++++    ++.+ .+++|++||...+....  + 
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~-  155 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--P-  155 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--C-
Confidence            2     25899999998                    2444544554444    3333 35799998864321100  0 


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                             .....|+..|...            ..+++++.++||.+-.+..
T Consensus       156 -------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~  199 (253)
T PRK05867        156 -------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELV  199 (253)
T ss_pred             -------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccc
Confidence                   0013466666322            2369999999999988754

>TIGR02415 23BDH acetoin reductases

Probab=99.39  E-value=3e-12  Score=109.01  Aligned_cols=142  Identities=20%  Similarity=0.193  Sum_probs=90.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~-  150 (250)
                      |+++||    ||+|+||.+++++|+++|++|+++.|+.+..+.+.+.    +. -....+..+.+|   ++++.+++.. 
T Consensus         1 k~~lIt----G~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~i~~~~~~~   71 (254)
T TIGR02415         1 KVALVT----GGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKE----IN-QAGGKAVAYKLDVSDKDQVFSAIDQA   71 (254)
T ss_pred             CEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            579999    9999999999999999999999999976443322110    00 011234455555   6666666532 


Q ss_pred             ----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCC-CCEEEEEcCcccccCCCCCCccC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                          ..+|+|||++|.                    |+.++..    ++..+++.+ .+++|++||.....+...     
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  146 (254)
T TIGR02415        72 AEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI-----  146 (254)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC-----
Confidence                148999999982                    3344443    344444433 368999998654322111     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|...+            .++++++++||.+.++.
T Consensus       147 -------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~  187 (254)
T TIGR02415       147 -------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM  187 (254)
T ss_pred             -------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence                   144665553322            25899999999987775

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08324 short chain dehydrogenase; Validated

Probab=99.38  E-value=2.7e-12  Score=124.74  Aligned_cols=142  Identities=25%  Similarity=0.269  Sum_probs=97.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D---~~~l~~~l  148 (250)
                      .+++||||    ||+|+||++++++|+++|++|++++|+.+..+...+.       +.. .++..+.+|   .+++.+++
T Consensus       421 ~gk~vLVT----GasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~-------l~~~~~v~~v~~Dvtd~~~v~~~~  489 (681)
T PRK08324        421 AGKVALVT----GAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAE-------LGGPDRALGVACDVTDEAAVQAAF  489 (681)
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-------HhccCcEEEEEecCCCHHHHHHHH
Confidence            45899999    9999999999999999999999999987554322111       000 134444444   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCC-CEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~-~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     ..+|+|||++|                    .|+.+...+++++    ++.+. ++||++||...+.....  
T Consensus       490 ~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--  567 (681)
T PRK08324        490 EEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--  567 (681)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--
Confidence            42     15899999999                    2455566664444    45554 79999999765433211  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeee-cCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMI-GSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~-G~~  237 (250)
                                ...|+..|...+.            ++++++++|+.+| +..
T Consensus       568 ----------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~  609 (681)
T PRK08324        568 ----------FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSG  609 (681)
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCc
Confidence                      2568877754433            5899999999998 553

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.7e-11  Score=103.00  Aligned_cols=143  Identities=22%  Similarity=0.288  Sum_probs=92.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE---eCCHHHHHhhhc-
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV---WGDPAEVGNVVG-  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v---~~D~~~l~~~l~-  149 (250)
                      +++|+||    ||+|++|++++++|+++|++|++++|+++..+.+...          .++.+.   ..|++++.++++ 
T Consensus         1 ~k~vlIt----G~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~   66 (225)
T PRK08177          1 KRTALII----GASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL----------PGVHIEKLDMNDPASLDQLLQR   66 (225)
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhc----------cccceEEcCCCCHHHHHHHHHH
Confidence            3689999    9999999999999999999999999987654332111          123333   334666655554 


Q ss_pred             --CCcccEEEeCCCc----------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          150 --GVTFDVVLDNNGK----------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       150 --~~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                        +..+|+|||++|.                      |+.+...+++.+..   .+..+++++||..  +.....+    
T Consensus        67 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~~~----  140 (225)
T PRK08177         67 LQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVELPD----  140 (225)
T ss_pred             hhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccccCC----
Confidence              2369999999972                      33455555555543   2335788888742  2211100    


Q ss_pred             CCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          203 DVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                         ......|+..|...+.            +++++.++||.+-.+...
T Consensus       141 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~  186 (225)
T PRK08177        141 ---GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG  186 (225)
T ss_pred             ---CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC
Confidence               0011347766633332            588999999999887644

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.38  E-value=2e-12  Score=111.65  Aligned_cols=144  Identities=21%  Similarity=0.149  Sum_probs=99.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcC-CceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~v~~v~~D---~~~l~~~l  148 (250)
                      .+|.|+||    ||+.+||.+++.+|+++|.+++.+.|..+.++.+.+.    +...... ++.++.+|   .+++.+.+
T Consensus        11 ~~kvVvIT----GASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~----l~~~~~~~~v~~~~~Dvs~~~~~~~~~   82 (282)
T KOG1205|consen   11 AGKVVLIT----GASSGIGEALAYELAKRGAKLVLVARRARRLERVAEE----LRKLGSLEKVLVLQLDVSDEESVKKFV   82 (282)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHH----HHHhCCcCccEEEeCccCCHHHHHHHH
Confidence            46899999    9999999999999999999998888877665544211    1111222 36666666   56666554


Q ss_pred             c-----CCcccEEEeCCC--------------------cCH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 G-----GVTFDVVLDNNG--------------------KNL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~-----~~~~d~Vi~~ag--------------------~~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +     -.++|++|||||                    .|+    ..|+.++..+++.+-+|||.+||+.-+-...-   
T Consensus        83 ~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~---  159 (282)
T KOG1205|consen   83 EWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF---  159 (282)
T ss_pred             HHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc---
Confidence            2     235999999999                    233    34777888888877789999999874433221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHhC--------------CcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISENF--------------SNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~~--------------~~~~ilRp~~i~G~~  237 (250)
                               .+.|.++|++.+.+              +.+ ++.||.|-...
T Consensus       160 ---------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~  201 (282)
T KOG1205|consen  160 ---------RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEF  201 (282)
T ss_pred             ---------ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecc
Confidence                     24577777655441              122 58999886663

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.7e-11  Score=102.66  Aligned_cols=141  Identities=18%  Similarity=0.192  Sum_probs=94.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh--
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV--  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l--  148 (250)
                      +++++||    ||+|+||++++++|+++|++|++++|+.+..+.+..           .+++++.+   |.+++.+++  
T Consensus         1 ~~~vlvt----G~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~   65 (222)
T PRK06953          1 MKTVLIV----GASRGIGREFVRQYRADGWRVIATARDAAALAALQA-----------LGAEALALDVADPASVAGLAWK   65 (222)
T ss_pred             CceEEEE----cCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------ccceEEEecCCCHHHHHHHHHH
Confidence            3689999    999999999999999999999999998755443221           12334444   466666653  


Q ss_pred             -cCCcccEEEeCCCc----------------------CHHhHHHHHHHHHh---CCCCEEEEEcCc-ccccCCCCCCccC
Q 025587          149 -GGVTFDVVLDNNGK----------------------NLDAVRPVADWAKS---SGVKQFLFISSA-GIYKPADEPPHVE  201 (250)
Q Consensus       149 -~~~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~-~vy~~~~~~~~~e  201 (250)
                       .+.++|+|||++|.                      |+.++.++++++..   ..-+++|++||. +.++.....    
T Consensus        66 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----  141 (222)
T PRK06953         66 LDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGT----  141 (222)
T ss_pred             hcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCC----
Confidence             33458999999883                      34566777777654   223579999885 344432110    


Q ss_pred             CCCCCCCCChhHHHHHHHHh----------CCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~~~  239 (250)
                           + ...|...|...+.          +++++.++||.+..+..+
T Consensus       142 -----~-~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~  183 (222)
T PRK06953        142 -----T-GWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG  183 (222)
T ss_pred             -----C-ccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC
Confidence                 0 0236665543322          478999999999988643

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.37  E-value=3.7e-12  Score=107.20  Aligned_cols=138  Identities=20%  Similarity=0.206  Sum_probs=91.3

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhhhcC
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      ||||    ||+|+||++++++|+++|++|++++|+. +..+.+.+       .+.  ...+..+.+|   .+++.+++++
T Consensus         1 vlIt----G~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~   69 (239)
T TIGR01830         1 ALVT----GASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVE-------ELKAYGVKALGVVCDVSDREDVKAVVEE   69 (239)
T ss_pred             CEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHH-------HHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            6899    9999999999999999999999999875 22211110       111  1124444454   6666666643


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcc-cccCCCCCCcc
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAG-IYKPADEPPHV  200 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~-vy~~~~~~~~~  200 (250)
                           ..+|+|||++|.                    |+.++.++++.+.+    .+.++||++||.. +|+...     
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~-----  144 (239)
T TIGR01830        70 IEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG-----  144 (239)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC-----
Confidence                 248999999993                    34556666666654    4567999999964 444321     


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+..|...            ..+++++++|||.+.++..
T Consensus       145 --------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~  186 (239)
T TIGR01830       145 --------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT  186 (239)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh
Confidence                    13455555311            2368999999999877643

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.37  E-value=2.3e-12  Score=110.60  Aligned_cols=146  Identities=16%  Similarity=0.136  Sum_probs=94.5

Q ss_pred             cCcEEEEEecCCCcch-hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG-~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~  147 (250)
                      +++++|||    ||+| .||+++++.|+++|++|++++|+.+..+...+.    +.. .....+..+.+|   ++++.++
T Consensus        16 ~~k~vlIt----G~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~   87 (262)
T PRK07831         16 AGKVVLVT----AAAGTGIGSATARRALEEGARVVISDIHERRLGETADE----LAAELGLGRVEAVVCDVTSEAQVDAL   87 (262)
T ss_pred             CCCEEEEE----CCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHHhcCCceEEEEEccCCCHHHHHHH
Confidence            35899999    9997 799999999999999999999877544322110    000 001234455555   6666666


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCC-CCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~-~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     ..+|+|||++|.                    |+.+...+++.    +++.+ .+++|+++|...+....  
T Consensus        88 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--  165 (262)
T PRK07831         88 IDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH--  165 (262)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--
Confidence            542     258999999982                    34444444444    44443 46899998865332211  


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ....|++.|...+            .++++++|+||.+..+..
T Consensus       166 ----------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~  208 (262)
T PRK07831        166 ----------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFL  208 (262)
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccc
Confidence                      1245776664332            269999999999998864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.37  E-value=4e-12  Score=108.97  Aligned_cols=142  Identities=21%  Similarity=0.166  Sum_probs=92.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~-  150 (250)
                      |+||||    ||+|.||++++++|+++|++|++++|+++..++..+.    +.  ....+..+.+|   ++++.++++. 
T Consensus         1 m~vlIt----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~--~~~~~~~~~~Dv~d~~~~~~~~~~~   70 (259)
T PRK08340          1 MNVLVT----ASSRGIGFNVARELLKKGARVVISSRNEENLEKALKE----LK--EYGEVYAVKADLSDKDDLKNLVKEA   70 (259)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HH--hcCCceEEEcCCCCHHHHHHHHHHH
Confidence            589999    9999999999999999999999999987544322111    00  00134444444   6667666642 


Q ss_pred             ----CcccEEEeCCCcC----------------------HHh----HHHHHHHHH-hCCCCEEEEEcCcccccCCCCCCc
Q 025587          151 ----VTFDVVLDNNGKN----------------------LDA----VRPVADWAK-SSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       151 ----~~~d~Vi~~ag~~----------------------~~~----~~~ll~~~~-~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                          ..+|+|||++|..                      +.+    +..++..+. +.+.++||++||...+.+...   
T Consensus        71 ~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~---  147 (259)
T PRK08340         71 WELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP---  147 (259)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC---
Confidence                2589999999831                      111    233444443 344579999999875432211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|++.|...+            .+++++.|.||.+-.+..
T Consensus       148 ---------~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~  189 (259)
T PRK08340        148 ---------LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGA  189 (259)
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence                     245666663332            268999999999987753

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.37  E-value=6.7e-12  Score=108.71  Aligned_cols=146  Identities=18%  Similarity=0.169  Sum_probs=91.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~~  147 (250)
                      +++++|||    ||+|+||++++++|+++|++|++++|+.+....+.........++  ....+.++.+|   ++++.++
T Consensus         5 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          5 SGKTLFIT----GASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            35799999    999999999999999999999999998654322110000000001  11234455555   6766666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++.     .++|+|||++|                    +|+.++.++++++..    .+-+++|++|+.....+.    
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----  156 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK----  156 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc----
Confidence            653     15899999998                    245566666666643    344689999885321110    


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCe
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQY  232 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~  232 (250)
                           . .+....|+..|...+.            +++++.+.|+.
T Consensus       157 -----~-~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~  196 (273)
T PRK08278        157 -----W-FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT  196 (273)
T ss_pred             -----c-cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence                 0 0112457766644433            58999999994

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=3.5e-12  Score=107.62  Aligned_cols=143  Identities=21%  Similarity=0.184  Sum_probs=90.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++|+||    ||+|+||.++++.|+++|++|++++|+++..+.+.+.    ..  ...++..+.+|   .+++.++++
T Consensus         4 ~~~~vlIt----Ga~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~   73 (238)
T PRK05786          4 KGKKVAII----GVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKT----LS--KYGNIHYVVGDVSSTESARNVIE   73 (238)
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH--hcCCeEEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322110    00  01134555555   666665543


Q ss_pred             C-----CcccEEEeCCCc------------------CHHhHHHHHHHHHhC--CCCEEEEEcCccc-ccCCCCCCccCCC
Q 025587          150 G-----VTFDVVLDNNGK------------------NLDAVRPVADWAKSS--GVKQFLFISSAGI-YKPADEPPHVEGD  203 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~v-y~~~~~~~~~e~~  203 (250)
                      .     ..+|.+++++|.                  |+.+...+++.+.+.  ..++||++||... ++...        
T Consensus        74 ~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------  145 (238)
T PRK05786         74 KAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP--------  145 (238)
T ss_pred             HHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC--------
Confidence            2     137999999973                  122333333333221  1258999998653 22111        


Q ss_pred             CCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                          ....|+.+|...            ..+++++++||+.++++.
T Consensus       146 ----~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        146 ----DQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence                114466666332            227999999999999975

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.37  E-value=7.7e-12  Score=106.93  Aligned_cols=141  Identities=16%  Similarity=0.172  Sum_probs=93.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .+|++|||    ||+|+||++++++|+++|++|+++++....  .+.+.        . ....+..+.+|   .+++.++
T Consensus         9 ~~k~~lIt----G~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~--------~-~~~~~~~~~~Dl~~~~~~~~~   75 (253)
T PRK08993          9 EGKVAVVT----GCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT--------A-LGRRFLSLTADLRKIDGIPAL   75 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH--------h-cCCeEEEEECCCCCHHHHHHH
Confidence            45899999    999999999999999999999988775421  11110        0 01123344444   6677666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|++||+||                    +|+.+..++++++    ++.+ -+++|++||...+.+....
T Consensus        76 ~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (253)
T PRK08993         76 LERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRV  155 (253)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCC
Confidence            653     25899999998                    3455555555544    3333 3689999998766543221


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                  ..|+..|...+            .+++++.++||.+..+..
T Consensus       156 ------------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~  196 (253)
T PRK08993        156 ------------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNT  196 (253)
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcch
Confidence                        34666653322            368999999999988753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.37  E-value=5.3e-12  Score=107.41  Aligned_cols=139  Identities=19%  Similarity=0.132  Sum_probs=90.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|.+ +..+.+.+.        ...+++++.+|   .+++.++++.
T Consensus         2 k~vlIt----GasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~   69 (251)
T PRK06924          2 RYVIIT----GTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ--------YNSNLTFHSLDLQDVHELETNFNE   69 (251)
T ss_pred             cEEEEe----cCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc--------cCCceEEEEecCCCHHHHHHHHHH
Confidence            689999    9999999999999999999999999976 332222111        12234445555   6666666542


Q ss_pred             C---------cccEEEeCCCc---------------------CHHh----HHHHHHHHHhC-CCCEEEEEcCcccccCCC
Q 025587          151 V---------TFDVVLDNNGK---------------------NLDA----VRPVADWAKSS-GVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       151 ~---------~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~-~~~~~v~iSS~~vy~~~~  195 (250)
                      .         ..+.+|+++|.                     |+.+    ++.+++.+++. +.++||++||...+.+..
T Consensus        70 ~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~  149 (251)
T PRK06924         70 ILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF  149 (251)
T ss_pred             HHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC
Confidence            1         12278888872                     3333    45555666553 356899999976442211


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh--------------CCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN--------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~--------------~~~~~ilRp~~i~G~~  237 (250)
                                  ....|+..|...+.              +++++.|+||.+-.+.
T Consensus       150 ------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  193 (251)
T PRK06924        150 ------------GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM  193 (251)
T ss_pred             ------------CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence                        12567766642222              4889999999987764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.36  E-value=6.8e-12  Score=107.60  Aligned_cols=146  Identities=21%  Similarity=0.183  Sum_probs=93.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      +.|++|||    ||+|+||++++++|+++|++|+++.|+.+. ...+.+.    +.. ....+.++.+   |.+++.+++
T Consensus         6 ~~k~~lIt----Ga~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~~~~~i~~~~   76 (261)
T PRK08936          6 EGKVVVIT----GGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEE----IKK-AGGEAIAVKGDVTVESDVVNLI   76 (261)
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HHH-cCCeEEEEEecCCCHHHHHHHH
Confidence            46899999    999999999999999999999998886422 1111100    000 0122334444   466666555


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|++||++|.                    |+.+    ++.+++.+++.+ -+++|++||...+.+..   
T Consensus        77 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~---  153 (261)
T PRK08936         77 QTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP---  153 (261)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC---
Confidence            42     258999999992                    2222    345566666654 46899999965332211   


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ....|+..|...            ..+++++.++||.+.++...
T Consensus       154 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        154 ---------LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             ---------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence                     124577666222            22699999999999988643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.35  E-value=2e-12  Score=111.07  Aligned_cols=145  Identities=15%  Similarity=0.141  Sum_probs=90.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+++||++++++|+++|++|+++.|+. +..+...+.    +.......+..+.+|   ++++.+++
T Consensus         7 ~~k~vlIt----Gas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~   78 (260)
T PRK08416          7 KGKTLVIS----GGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAED----LEQKYGIKAKAYPLNILEPETYKELF   78 (260)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999887643 322221110    000011234444444   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      +.     .++|++||+||.                          |+.    .++.+++.+++.+.++||++||...+..
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (260)
T PRK08416         79 KKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY  158 (260)
T ss_pred             HHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC
Confidence            43     258999999962                          111    1334455555555679999999653321


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                      ...            ...|+++|...            ..+++++.|.||.+-.+.
T Consensus       159 ~~~------------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~  202 (260)
T PRK08416        159 IEN------------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA  202 (260)
T ss_pred             CCC------------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence            111            13455555332            226999999999987664

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.35  E-value=4.4e-12  Score=106.50  Aligned_cols=138  Identities=20%  Similarity=0.184  Sum_probs=95.8

Q ss_pred             EEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC-cc
Q 025587           78 LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV-TF  153 (250)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~-~~  153 (250)
                      |||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.  ...+++++.+|   ++++.++++.. ++
T Consensus         1 lIt----Gas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~i   70 (230)
T PRK07041          1 LVV----GGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARA----LG--GGAPVRTAALDITDEAAVDAFFAEAGPF   70 (230)
T ss_pred             Cee----cCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----Hh--cCCceEEEEccCCCHHHHHHHHHhcCCC
Confidence            689    9999999999999999999999999986543322110    00  02234455554   77888877643 48


Q ss_pred             cEEEeCCCc--------------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhH
Q 025587          154 DVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (250)
Q Consensus       154 d~Vi~~ag~--------------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~  213 (250)
                      |++||++|.                    |+.+..+++++....+.++||++||...|.....            ...|+
T Consensus        71 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~------------~~~Y~  138 (230)
T PRK07041         71 DHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSAS------------GVLQG  138 (230)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCc------------chHHH
Confidence            999999982                    3445666666555456689999999887654322            25577


Q ss_pred             HHHHHHHh----------CCcEEEEecCeeecCC
Q 025587          214 VEKYISEN----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       214 ~~k~~~e~----------~~~~~ilRp~~i~G~~  237 (250)
                      ..|...+.          .++++.++||.+.++.
T Consensus       139 ~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~  172 (230)
T PRK07041        139 AINAALEALARGLALELAPVRVNTVSPGLVDTPL  172 (230)
T ss_pred             HHHHHHHHHHHHHHHHhhCceEEEEeecccccHH
Confidence            77644332          4789999999887664

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.34  E-value=1.4e-11  Score=105.83  Aligned_cols=136  Identities=24%  Similarity=0.289  Sum_probs=100.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      ++||||    ||||++|++++++|+++||+|+++.|+++....+.            .++++..+|   ++.+...+++ 
T Consensus         1 ~~ilV~----GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~G-   63 (275)
T COG0702           1 MKILVT----GATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAKG-   63 (275)
T ss_pred             CeEEEE----ecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhcc-
Confidence            579999    99999999999999999999999999997766432            356666665   8888888888 


Q ss_pred             cccEEEeCCCc-------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhC
Q 025587          152 TFDVVLDNNGK-------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENF  222 (250)
Q Consensus       152 ~~d~Vi~~ag~-------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~  222 (250)
                       .|.++++.+.       .......+++.++..  ++++++++|..+......         ......+...|+.+.+.+
T Consensus        64 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~---------~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702          64 -VDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP---------SALARAKAAVEAALRSSG  133 (275)
T ss_pred             -ccEEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc---------cHHHHHHHHHHHHHHhcC
Confidence             5877777662       223345556666664  478899988866432111         111236788899999999


Q ss_pred             CcEEEEecCeeecCC
Q 025587          223 SNWASFRPQYMIGSG  237 (250)
Q Consensus       223 ~~~~ilRp~~i~G~~  237 (250)
                      ++++++|+..+|...
T Consensus       134 ~~~t~lr~~~~~~~~  148 (275)
T COG0702         134 IPYTTLRRAAFYLGA  148 (275)
T ss_pred             CCeEEEecCeeeecc
Confidence            999999977776653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=2.2e-11  Score=104.28  Aligned_cols=141  Identities=13%  Similarity=0.126  Sum_probs=89.9

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+++||    ||+  +.||++++++|+++|++|++.+|+.+..+.+.        ++....+..+.+|   ++++.++
T Consensus         6 ~~k~~lIt----Gas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~~v~~~   73 (252)
T PRK06079          6 SGKKIVVM----GVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ--------KLVDEEDLLVECDVASDESIERA   73 (252)
T ss_pred             CCCEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH--------hhccCceeEEeCCCCCHHHHHHH
Confidence            46899999    999  79999999999999999999988732111111        1111234445555   6666655


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     .++|++||+||.                        |+.+...+.+++...  .-+++|++||.......  
T Consensus        74 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~--  151 (252)
T PRK06079         74 FATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI--  151 (252)
T ss_pred             HHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC--
Confidence            432     258999999982                        233333333333321  13689999986533221  


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                +....|++.|...+            .+++++.|.||.|-.+.
T Consensus       152 ----------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~  194 (252)
T PRK06079        152 ----------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA  194 (252)
T ss_pred             ----------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence                      11255777763332            36999999999998774

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=1.5e-11  Score=104.34  Aligned_cols=145  Identities=16%  Similarity=0.136  Sum_probs=93.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..+++|||    ||+|+||..++++|+++|++|++++|+.+..+...+.    +. .....+..+.+|   .+++.++++
T Consensus         4 ~~~~~lIt----G~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   74 (253)
T PRK08217          4 KDKVIVIT----GGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAE----CG-ALGTEVRGYAANVTDEEDVEATFA   74 (253)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987543322110    00 011234444555   556655554


Q ss_pred             C-----CcccEEEeCCCc-----------------------------CHHhHH----HHHHHHHhC-CCCEEEEEcCccc
Q 025587          150 G-----VTFDVVLDNNGK-----------------------------NLDAVR----PVADWAKSS-GVKQFLFISSAGI  190 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-----------------------------~~~~~~----~ll~~~~~~-~~~~~v~iSS~~v  190 (250)
                      .     ..+|+|||++|.                             |+.+..    .+++.+.+. .-.++|++||...
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~  154 (253)
T PRK08217         75 QIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR  154 (253)
T ss_pred             HHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence            3     248999999983                             112222    333344333 3357999999876


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                      |+...             ...|+..|...            ..+++++.++||.+.++...
T Consensus       155 ~~~~~-------------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~  202 (253)
T PRK08217        155 AGNMG-------------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA  202 (253)
T ss_pred             cCCCC-------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc
Confidence            65421             14466666322            23699999999999888654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.32  E-value=1.8e-11  Score=108.31  Aligned_cols=111  Identities=21%  Similarity=0.220  Sum_probs=75.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+++++||    ||+++||.+++++|+++| ++|++++|+.+..+++.+.    +. .....+.++.+|   .+++.+++
T Consensus         2 ~~k~vlIT----Gas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         2 QKPTVIIT----GASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKS----LG-MPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH----hc-CCCCeEEEEEcCCCCHHHHHHHH
Confidence            57899999    999999999999999999 9999999987554332211    00 011234444444   56665554


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCccccc
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYK  192 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy~  192 (250)
                      +.     ..+|++||+||+                     |+.+    ++.+++.+++.+  .++||++||...+.
T Consensus        73 ~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~  148 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT  148 (314)
T ss_pred             HHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence            32     258999999983                     2333    444566665543  46999999987653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.31  E-value=5.3e-11  Score=98.05  Aligned_cols=127  Identities=19%  Similarity=0.165  Sum_probs=90.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC-cc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-TF  153 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~-~~  153 (250)
                      |+++||    ||+|+||++++++|+++ ++|++++|+.+                   .++++..|.++++++++.. ++
T Consensus         1 ~~vlIt----Gas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~i   56 (199)
T PRK07578          1 MKILVI----GASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKVGKV   56 (199)
T ss_pred             CeEEEE----cCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhcCCC
Confidence            479999    99999999999999999 99999998752                   1345556788888877643 59


Q ss_pred             cEEEeCCCc--------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          154 DVVLDNNGK--------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       154 d~Vi~~ag~--------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      |+|||++|.                    |+.++.++++++..  .+..+|+++||.....+..            ....
T Consensus        57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~------------~~~~  124 (199)
T PRK07578         57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP------------GGAS  124 (199)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC------------CchH
Confidence            999999982                    34555666666544  1235799999865332211            1255


Q ss_pred             hHHHHHHH-----------HhCCcEEEEecCeeecCC
Q 025587          212 VQVEKYIS-----------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       212 y~~~k~~~-----------e~~~~~~ilRp~~i~G~~  237 (250)
                      |++.|...           +.+++++.|+||.+-.+.
T Consensus       125 Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        125 AATVNGALEGFVKAAALELPRGIRINVVSPTVLTESL  161 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch
Confidence            77666322           236899999999987664

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.31  E-value=1.3e-11  Score=104.17  Aligned_cols=142  Identities=14%  Similarity=0.124  Sum_probs=91.1

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC--
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG--  150 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~--  150 (250)
                      ||||    ||+|+||.+++++|+++|++|+++.|..+ ..+.+.+.    +.. ...++.++.+|   .+++.++++.  
T Consensus         1 vlIt----Gas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~----l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~   71 (239)
T TIGR01831         1 VLVT----GASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSA----IQA-QGGNARLLQFDVADRVACRTLLEADI   71 (239)
T ss_pred             CEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HHH-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence            6899    99999999999999999999999987642 22211100    000 11234555555   6666555532  


Q ss_pred             ---CcccEEEeCCC--------------------cCHHhHHHHHHHH-----HhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 ---VTFDVVLDNNG--------------------KNLDAVRPVADWA-----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ---~~~d~Vi~~ag--------------------~~~~~~~~ll~~~-----~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                         ..+|++||++|                    .|+.++.++++++     ++.+.++||++||...+.+...      
T Consensus        72 ~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------  145 (239)
T TIGR01831        72 AEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG------  145 (239)
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC------
Confidence               24799999998                    2455666666654     2345578999999653322211      


Q ss_pred             CCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          203 DVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                            ...|+..|..            .+.+++++.++||.+.++...
T Consensus       146 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  188 (239)
T TIGR01831       146 ------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA  188 (239)
T ss_pred             ------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch
Confidence                  1335555432            223699999999999888654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.2e-11  Score=104.35  Aligned_cols=145  Identities=13%  Similarity=0.113  Sum_probs=94.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      .+|+|+||    ||+|.||++++++|+++|++|++++|+.+..+.+.+.    +.......+..+.+   |++++.++++
T Consensus         6 ~~k~vlIt----G~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          6 AGKRVLIT----GASKGIGAAAAEAFAAEGCHLHLVARDADALEALAAD----LRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----HHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544332110    00001123344444   4777777665


Q ss_pred             C-CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          150 G-VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       150 ~-~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      . ..+|++||++|.                    |+.+...    +++.+++.+-+++|++||.....+..         
T Consensus        78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------  148 (259)
T PRK06125         78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA---------  148 (259)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC---------
Confidence            3 259999999982                    3444433    44444555556899999865322111         


Q ss_pred             CCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          205 VKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                         ....|.+.|...            ..+++++.++||.+..+.
T Consensus       149 ---~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  190 (259)
T PRK06125        149 ---DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR  190 (259)
T ss_pred             ---CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence               113455555332            236999999999998773

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.30  E-value=1.6e-11  Score=106.53  Aligned_cols=155  Identities=15%  Similarity=0.115  Sum_probs=94.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe---CCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW---GDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~---~D~~~l~~~l~  149 (250)
                      |+|.++||    || |+||++++++|. +|++|++++|+.+..+.+.+.    +.. ....+.++.   .|.+++.++++
T Consensus         1 ~~k~~lIt----Ga-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~Dv~d~~~i~~~~~   69 (275)
T PRK06940          1 MKEVVVVI----GA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKT----LRE-AGFDVSTQEVDVSSRESVKALAA   69 (275)
T ss_pred             CCCEEEEE----CC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHH----HHh-cCCeEEEEEeecCCHHHHHHHHH
Confidence            56889999    87 799999999996 899999999986544322111    000 011233344   45667766664


Q ss_pred             C----CcccEEEeCCC-------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCC-----CC---CccCC
Q 025587          150 G----VTFDVVLDNNG-------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD-----EP---PHVEG  202 (250)
Q Consensus       150 ~----~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~-----~~---~~~e~  202 (250)
                      .    ..+|+|||+||             +|+.++.++++++.+.  .-+++|++||........     ..   ..+..
T Consensus        70 ~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         70 TAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             HHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccc
Confidence            2    25899999999             3566777776666541  124567777765332210     00   00000


Q ss_pred             C--------C--CCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          203 D--------V--VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~--------~--~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      +        +  ..+....|+++|...+            .+++++.|.||.+.++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~  207 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLA  207 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccc
Confidence            0        0  0012256888885422            269999999999988753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.30  E-value=7.5e-12  Score=121.41  Aligned_cols=142  Identities=18%  Similarity=0.233  Sum_probs=93.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.. .....+..+.+|   .+++.+++
T Consensus       413 ~gkvvLVT----GasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~----l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       413 ARRVAFVT----GGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAE----INGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHH----HHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    000 001123344444   77777766


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     .+|+|||+||.                    |+.+    ++.+++.+++.+ .++||++||...+.....  
T Consensus       485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~--  562 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN--  562 (676)
T ss_pred             HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC--
Confidence            531     48999999992                    1222    334455555544 358999999654332211  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeee
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMI  234 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~  234 (250)
                                ...|+..|...+.            +++++.|+|+.|+
T Consensus       563 ----------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       563 ----------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             ----------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence                      2568888744332            5899999999987

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.28  E-value=3.6e-11  Score=101.20  Aligned_cols=133  Identities=15%  Similarity=0.194  Sum_probs=87.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+++||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.          .++..+.+|   ++++.++++..
T Consensus         1 m~vlIt----Gas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~   66 (223)
T PRK05884          1 VEVLVT----GGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----------LDVDAIVCDNTDPASLEEARGLF   66 (223)
T ss_pred             CeEEEE----eCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------ccCcEEecCCCCHHHHHHHHHHH
Confidence            479999    9999999999999999999999999987554432211          123344444   77777776531


Q ss_pred             --cccEEEeCCCc-------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          152 --TFDVVLDNNGK-------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       152 --~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                        .+|++||++|.                         |+.+...+++++..  ..-+++|++||..   .    +    
T Consensus        67 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---~----~----  135 (223)
T PRK05884         67 PHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---P----P----  135 (223)
T ss_pred             hhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---C----C----
Confidence              48999999762                         22233333333322  1136899999854   0    0    


Q ss_pred             CCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                           ....|++.|...            ..+++++.|.||.+..+.
T Consensus       136 -----~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~  177 (223)
T PRK05884        136 -----AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG  177 (223)
T ss_pred             -----CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh
Confidence                 014477666332            236999999999997664

>PRK06484 short chain dehydrogenase; Validated

Probab=99.27  E-value=3.3e-11  Score=113.38  Aligned_cols=142  Identities=15%  Similarity=0.149  Sum_probs=94.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCc---eEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG---KTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v---~~v~~D~~~l~~~l~  149 (250)
                      ++|++|||    ||+++||.+++++|+++|++|++++|+.+..+.+.+.        ....+   ..+..|++++.++++
T Consensus         4 ~~k~~lIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          4 QSRVVLVT----GAAGGIGRAACQRFARAGDQVVVADRNVERARERADS--------LGPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCeEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hCCceeEEEeccCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987654432211        11122   334445777766664


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHh----HHHHHHHHHhCCCC-EEEEEcCcccccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~----~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~  197 (250)
                      .     ..+|++||++|.                      |+.+    ++.++..+++.+.+ +||++||........+ 
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~-  150 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK-  150 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-
Confidence            3     258999999984                      2333    33444455444443 8999999764433211 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                 ...|+..|...+            .+++++.++||.|..+..
T Consensus       151 -----------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~  192 (520)
T PRK06484        151 -----------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMV  192 (520)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhh
Confidence                       245666663332            369999999999877753

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.27  E-value=5.6e-11  Score=102.35  Aligned_cols=153  Identities=15%  Similarity=0.133  Sum_probs=103.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D---~~~l~~~  147 (250)
                      ..++.||||    ||.+++|+.++.+++++|..+.+.+.+.+..++-.+       ++.. ..++.+.+|   .+++.+.
T Consensus        36 v~g~~vLIT----Ggg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~-------~~~~~g~~~~y~cdis~~eei~~~  104 (300)
T KOG1201|consen   36 VSGEIVLIT----GGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVK-------EIRKIGEAKAYTCDISDREEIYRL  104 (300)
T ss_pred             ccCCEEEEe----CCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHH-------HHHhcCceeEEEecCCCHHHHHHH
Confidence            346899999    999999999999999999999999988765442211       1111 134445554   6666655


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .+.     .++|++||+||                    +|+    ..++.++..+.+.+-+|+|-++|+..+-....  
T Consensus       105 a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g--  182 (300)
T KOG1201|consen  105 AKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG--  182 (300)
T ss_pred             HHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc--
Confidence            432     25999999999                    233    34788888888888889999999754332222  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh---------------CCcEEEEecCeeecCCCC--CCccccce
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN---------------FSNWASFRPQYMIGSGNN--KDCEEWFF  247 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~---------------~~~~~ilRp~~i~G~~~~--~~~~~~~~  247 (250)
                                ...|+++|+...-               +++.+.+.|+.+-..+-.  ..+..||+
T Consensus       183 ----------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~~l~P  238 (300)
T KOG1201|consen  183 ----------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFPTLAP  238 (300)
T ss_pred             ----------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCccccC
Confidence                      1446666632211               589999999998755433  33444443

>PRK05599 hypothetical protein; Provisional

Probab=99.26  E-value=3.9e-11  Score=102.34  Aligned_cols=142  Identities=17%  Similarity=0.146  Sum_probs=90.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~-  150 (250)
                      |+++||    ||++.||++++++|+ +|++|++++|+.+..+.+.+.    +.+.....+.++.+   |++++.++++. 
T Consensus         1 ~~vlIt----Gas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   71 (246)
T PRK05599          1 MSILIL----GGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASD----LRQRGATSVHVLSFDAQDLDTHRELVKQT   71 (246)
T ss_pred             CeEEEE----eCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHH----HHhccCCceEEEEcccCCHHHHHHHHHHH
Confidence            579999    999999999999998 599999999987665433211    00001112344444   46666555432 


Q ss_pred             ----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                          .++|++||++|.                    |+.+    ++.+++.+++.+ -++||++||...+.+...     
T Consensus        72 ~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-----  146 (246)
T PRK05599         72 QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-----  146 (246)
T ss_pred             HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-----
Confidence                258999999993                    1112    223345555443 468999999754322111     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|++.|...+            .+++++.+.||.+..+.
T Consensus       147 -------~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~  187 (246)
T PRK05599        147 -------NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSM  187 (246)
T ss_pred             -------CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchh
Confidence                   244666663322            26899999999998874

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.26  E-value=4e-11  Score=109.79  Aligned_cols=162  Identities=17%  Similarity=0.235  Sum_probs=107.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCccccC-------CCCCCCcccch---hcCCceEEeC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKM-------KKPPFNRFNEI---VSAGGKTVWG  139 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~-------~~~~~~~~~~~---~~~~v~~v~~  139 (250)
                      ..|+|+||    |||||+|.-++++|+..-   -+++++.|..+..+..       .++-|..+.+.   .-..+..+.|
T Consensus        11 ~~k~i~vT----G~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~G   86 (467)
T KOG1221|consen   11 KNKTIFVT----GATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAG   86 (467)
T ss_pred             CCCeEEEE----cccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccc
Confidence            47899999    999999999999999863   4788888876443211       11111111111   1133455666


Q ss_pred             C---------HHHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccccC---
Q 025587          140 D---------PAEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP---  193 (250)
Q Consensus       140 D---------~~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~---  193 (250)
                      |         ..++..+...  +|+|||+|+             +|..|++++++.|++. ..+-+|++|++.+.-.   
T Consensus        87 Di~~~~LGis~~D~~~l~~e--V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~  164 (467)
T KOG1221|consen   87 DISEPDLGISESDLRTLADE--VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH  164 (467)
T ss_pred             cccCcccCCChHHHHHHHhc--CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence            6         4666644444  899999999             5899999999999994 5888999999866521   


Q ss_pred             CCCCCccCCCCC-------------------------CCCCChhHHHHHHHHh-------CCcEEEEecCeeecCCCCC
Q 025587          194 ADEPPHVEGDVV-------------------------KPDAGHVQVEKYISEN-------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       194 ~~~~~~~e~~~~-------------------------~~~~~~y~~~k~~~e~-------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ..+.++.+....                         ...-..|...|.+.|.       +++.+|+||+.|.....++
T Consensus       165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCC
Confidence            122222221100                         0002446666766665       5899999999998886554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.26  E-value=1.9e-10  Score=91.49  Aligned_cols=140  Identities=15%  Similarity=0.153  Sum_probs=92.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++++|+    ||+|+||.+++++|+++|+ .|+++.|+.+..+....    .+..+  ....+.++..|   ++.+.+++
T Consensus         1 ~~~li~----Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (180)
T smart00822        1 GTYLIT----GGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAE----LLAELEALGAEVTVVACDVADRAALAAAL   72 (180)
T ss_pred             CEEEEE----cCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHH----HHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            479999    9999999999999999996 68888887643321100    00011  11234455555   55555554


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      +.     ..+|.|||++|                    .|+.++.++++++++.+.+++|++||.........       
T Consensus        73 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~-------  145 (180)
T smart00822       73 AAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPG-------  145 (180)
T ss_pred             HHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCC-------
Confidence            32     24799999998                    24677888999998878889999999654322111       


Q ss_pred             CCCCCCChhHHHHHH--------HHhCCcEEEEecCeee
Q 025587          204 VVKPDAGHVQVEKYI--------SENFSNWASFRPQYMI  234 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~--------~e~~~~~~ilRp~~i~  234 (250)
                           ...|+..|..        ...+++++.+.||.+-
T Consensus       146 -----~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      146 -----QANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             -----chhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence                 1346655533        3346889999888764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=4.2e-11  Score=105.58  Aligned_cols=138  Identities=20%  Similarity=0.129  Sum_probs=89.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      .++|++|||    ||+|+||++++++|+++|++|++.++..+ ..+...+       ++.  ...+..+.+|   .+++.
T Consensus        10 l~~k~~lVT----Gas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~-------~i~~~g~~~~~~~~Dv~d~~~~~   78 (306)
T PRK07792         10 LSGKVAVVT----GAAAGLGRAEALGLARLGATVVVNDVASALDASDVLD-------EIRAAGAKAVAVAGDISQRATAD   78 (306)
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHH-------HHHhcCCeEEEEeCCCCCHHHHH
Confidence            346899999    99999999999999999999999987642 2221110       111  1234455555   66666


Q ss_pred             hhhcC----CcccEEEeCCCc--------------------CHHhHHHHHHHHH----hC-------CCCEEEEEcCccc
Q 025587          146 NVVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWAK----SS-------GVKQFLFISSAGI  190 (250)
Q Consensus       146 ~~l~~----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~----~~-------~~~~~v~iSS~~v  190 (250)
                      ++++.    .++|+|||+||.                    |+.++.++++++.    +.       ..++||++||...
T Consensus        79 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         79 ELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            65542    258999999982                    4456666665543    21       1258999998764


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCe
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQY  232 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~  232 (250)
                      +.....            ...|+..|...+            .++++++|.|+.
T Consensus       159 ~~~~~~------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        159 LVGPVG------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             ccCCCC------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence            432211            145777774322            368999999983

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.7e-10  Score=98.68  Aligned_cols=138  Identities=16%  Similarity=0.122  Sum_probs=87.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++++++||    ||+|+||++++++|+++|++|++++|+..........       .....+..+..|.+++.+.+..  
T Consensus        13 ~~k~~lIT----Gas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~--   79 (245)
T PRK12367         13 QGKRIGIT----GASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-------SPNEWIKWECGKEESLDKQLAS--   79 (245)
T ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-------CCCeEEEeeCCCHHHHHHhcCC--
Confidence            45899999    9999999999999999999999999876211110000       0001233445567788777765  


Q ss_pred             ccEEEeCCC-----------------cCHHhHHHHHHHHHh----C---CCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          153 FDVVLDNNG-----------------KNLDAVRPVADWAKS----S---GVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       153 ~d~Vi~~ag-----------------~~~~~~~~ll~~~~~----~---~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      +|++|||||                 +|+.+...+++++..    .   +.+.++..+|.+...+.             .
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~-------------~  146 (245)
T PRK12367         80 LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA-------------L  146 (245)
T ss_pred             CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC-------------C
Confidence            899999998                 255666666655433    1   12234444444322110             0


Q ss_pred             CChhHHHHHHHH---------------hCCcEEEEecCeeecC
Q 025587          209 AGHVQVEKYISE---------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       209 ~~~y~~~k~~~e---------------~~~~~~ilRp~~i~G~  236 (250)
                      ...|+++|...+               .++.++.+.||.+..+
T Consensus       147 ~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~  189 (245)
T PRK12367        147 SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSE  189 (245)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccc
Confidence            145887775531               2577888999887654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=1e-10  Score=100.26  Aligned_cols=149  Identities=12%  Similarity=0.052  Sum_probs=92.0

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCcccc-C--CCCCCCcc-cchh--cCCceEEeCC---H
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDK-M--KKPPFNRF-NEIV--SAGGKTVWGD---P  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~-~--~~~~~~~~-~~~~--~~~v~~v~~D---~  141 (250)
                      ++|+||||    ||+|  .||++++++|+++|++|++..|....... .  .......+ .++.  ...+.++.+|   .
T Consensus         5 ~~k~vlVt----Gas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   80 (256)
T PRK12859          5 KNKVAVVT----GVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQN   80 (256)
T ss_pred             CCcEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            46899999    9995  89999999999999999987653210000 0  00000000 0111  1234455555   6


Q ss_pred             HHHHhhhcC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          142 AEVGNVVGG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       142 ~~l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      +++.++++.     ..+|+|||++|.                    |+.+    ++.++..+++.+.++||++||...+.
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            666666542     248999999982                    3333    34445666655567999999976432


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      +..            ....|++.|...+            .+++++.++||.+-.+.
T Consensus       161 ~~~------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        161 PMV------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             CCC------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence            211            1255777764332            36999999999987764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.25  E-value=7.5e-11  Score=98.82  Aligned_cols=168  Identities=20%  Similarity=0.202  Sum_probs=121.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-----cCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-----KMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-----~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      .|..|||    |-||+-|++|++.|+++||+|..+.|..+...     ++-..+.    ...........+|   ...+.
T Consensus        28 rkvALIT----GItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~----~h~~~~mkLHYgDmTDss~L~   99 (376)
T KOG1372|consen   28 RKVALIT----GITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPH----THNGASMKLHYGDMTDSSCLI   99 (376)
T ss_pred             ceEEEEe----cccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCch----hcccceeEEeeccccchHHHH
Confidence            4577999    99999999999999999999999998764432     2222211    1112334455555   77888


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCC---CEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~---~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      +++...+++-|+|+|+                ++..|+.+++++.+.++.   -||--.|+...||...+.|..|..|..
T Consensus       100 k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy  179 (376)
T KOG1372|consen  100 KLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY  179 (376)
T ss_pred             HHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC
Confidence            8888778888998887                356689999999998653   278889999999998888999999998


Q ss_pred             CCCChhHHHHHHHHhC-----CcEEEEecCeeecCCCCCCccccceecC
Q 025587          207 PDAGHVQVEKYISENF-----SNWASFRPQYMIGSGNNKDCEEWFFDRK  250 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~~-----~~~~ilRp~~i~G~~~~~~~~~~~~~~~  250 (250)
                      |- ++|++.|...-..     -.|..+..-.|.=.++.+.+.+-|..||
T Consensus       180 PR-SPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRK  227 (376)
T KOG1372|consen  180 PR-SPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRK  227 (376)
T ss_pred             CC-ChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHH
Confidence            85 9999999644221     1133444444555566666666666554

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.25  E-value=9.7e-11  Score=100.66  Aligned_cols=142  Identities=13%  Similarity=0.072  Sum_probs=88.0

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCc---cccCCCCCCCcccchhcCCceEEeCC---HHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDEN---SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~---~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l  144 (250)
                      .+|+++||    ||+  +.||++++++|+++|++|++++|+...   .+++.+.       +....+..+.+|   ++++
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~Dv~d~~~v   74 (257)
T PRK08594          6 EGKTYVVM----GVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADT-------LEGQESLLLPCDVTSDEEI   74 (257)
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHH-------cCCCceEEEecCCCCHHHH
Confidence            46899999    997  899999999999999999999875321   2211110       111234444444   6666


Q ss_pred             HhhhcC-----CcccEEEeCCCcC------------------------HHhHHHHHHHHHh--CCCCEEEEEcCcccccC
Q 025587          145 GNVVGG-----VTFDVVLDNNGKN------------------------LDAVRPVADWAKS--SGVKQFLFISSAGIYKP  193 (250)
Q Consensus       145 ~~~l~~-----~~~d~Vi~~ag~~------------------------~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~  193 (250)
                      .++++.     .++|++|||+|..                        +.+...+++++..  ..-.+||++||......
T Consensus        75 ~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  154 (257)
T PRK08594         75 TACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV  154 (257)
T ss_pred             HHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC
Confidence            665532     2589999999831                        2222223333322  11258999999653221


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      .            +....|+++|...+            .+++++.|.||.+..+.
T Consensus       155 ~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  198 (257)
T PRK08594        155 V------------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS  198 (257)
T ss_pred             C------------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence            1            11245777763322            26999999999998764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.24  E-value=5e-11  Score=99.23  Aligned_cols=158  Identities=17%  Similarity=0.139  Sum_probs=111.6

Q ss_pred             cccccccccCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHH
Q 025587           65 FTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (250)
Q Consensus        65 ~~~~~~~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~  143 (250)
                      +...+...+..+||||    ||-|.+|..+++.|..+ |.+-+++..-....++..+.         ++-+-.+..|...
T Consensus        35 FH~~s~~~~~PrvLIT----G~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~---------GPyIy~DILD~K~  101 (366)
T KOG2774|consen   35 FHTISQTQKAPRVLIT----GSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDV---------GPYIYLDILDQKS  101 (366)
T ss_pred             cccccccCCCCeEEEe----cchHHHhHHHHHHHHHHhCCccEehhhccCCchhhccc---------CCchhhhhhcccc
Confidence            3333445566799999    99999999999988765 76655554322222211111         1112233446888


Q ss_pred             HHhhhcCCcccEEEeCCC---------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          144 VGNVVGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      +++++-+.++|.+||..+               +|+.|..|+++.+++++. ++..-|+++.||+.....-+.+-.....
T Consensus       102 L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  102 LEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             HHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecC
Confidence            999988888999999865               689999999999999988 5667899999998654333333333333


Q ss_pred             CChhHHHHHHHHh---------CCcEEEEecCeeecC
Q 025587          209 AGHVQVEKYISEN---------FSNWASFRPQYMIGS  236 (250)
Q Consensus       209 ~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~  236 (250)
                      +..|+++|..+|.         ++++-.+|...++..
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISA  217 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhcCccceecccCccccc
Confidence            5899999988876         588999998888765

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.24  E-value=4.2e-11  Score=110.92  Aligned_cols=142  Identities=17%  Similarity=0.128  Sum_probs=95.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++++|||    ||+|+||..++++|+++|++|++++|....  ...+.+       ++....+.++..|.+++.++++.
T Consensus       209 ~g~~vlIt----GasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        209 AGKVALVT----GAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN-------RVGGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH-------HcCCeEEEEeCCCHHHHHHHHHH
Confidence            46899999    999999999999999999999999885321  111110       00011233445566666666542


Q ss_pred             -----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCC----CCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSG----VKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~----~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ..+|+|||++|                    .|+.++.++.+++....    .++||++||...+.....     
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~-----  352 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG-----  352 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-----
Confidence                 15899999998                    24667777777776532    368999999764432211     


Q ss_pred             CCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+..|..            .+.+++++.+.||.+-.+.
T Consensus       353 -------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~  393 (450)
T PRK08261        353 -------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM  393 (450)
T ss_pred             -------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchh
Confidence                   2557777642            2236899999999986543

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.23  E-value=6e-11  Score=103.55  Aligned_cols=140  Identities=17%  Similarity=0.171  Sum_probs=88.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---------CccccCCCCCCCcccchh--cCCceEEeCC-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIV--SAGGKTVWGD-  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~--~~~v~~v~~D-  140 (250)
                      ++|++|||    ||+++||++++++|+++|++|++++|+.         +..+...       .++.  ...+..+.+| 
T Consensus         5 ~~k~~lIT----Gas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~-------~~l~~~~~~~~~~~~Dv   73 (286)
T PRK07791          5 DGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVV-------DEIVAAGGEAVANGDDI   73 (286)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHH-------HHHHhcCCceEEEeCCC
Confidence            46899999    9999999999999999999999998764         2221111       0111  1223344444 


Q ss_pred             --HHHHHhhhcC-----CcccEEEeCCCc--------------------CHHhHHHHH----HHHHhCC------CCEEE
Q 025587          141 --PAEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSG------VKQFL  183 (250)
Q Consensus       141 --~~~l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll----~~~~~~~------~~~~v  183 (250)
                        .+++.++++.     .++|++||+||.                    |+.++..+.    +.+++.+      .++||
T Consensus        74 ~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv  153 (286)
T PRK07791         74 ADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARII  153 (286)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEE
Confidence              6666655532     258999999982                    444544444    4333321      25899


Q ss_pred             EEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       184 ~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                      ++||...+.....            ...|++.|...            ..+++++.|.|| +..+
T Consensus       154 ~isS~~~~~~~~~------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~  205 (286)
T PRK07791        154 NTSSGAGLQGSVG------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR  205 (286)
T ss_pred             EeCchhhCcCCCC------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC
Confidence            9999664332211            24577777332            237999999998 4333

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.22  E-value=1e-10  Score=98.84  Aligned_cols=141  Identities=10%  Similarity=0.083  Sum_probs=90.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      ++++++||    ||++.||++++++|+++|++|+++.|+.+..++..+.    ... ....+..+..   |++++.++++
T Consensus         4 ~~k~~lVt----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~----i~~-~~~~~~~~~~D~~~~~~~~~~~~   74 (227)
T PRK08862          4 KSSIILIT----SAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQ----CSA-LTDNVYSFQLKDFSQESIRHLFD   74 (227)
T ss_pred             CCeEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHh-cCCCeEEEEccCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987655433211    000 0112333333   4666665543


Q ss_pred             C-----C-cccEEEeCCCc---------------------CHHh----HHHHHHHHHhCC-CCEEEEEcCcccccCCCCC
Q 025587          150 G-----V-TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~-----~-~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~  197 (250)
                      .     . .+|++||++|.                     |+.+    .+.++..+++.+ .+++|++||...+.     
T Consensus        75 ~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----  149 (227)
T PRK08862         75 AIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-----  149 (227)
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-----
Confidence            1     1 59999999971                     1112    233445555443 46899999854221     


Q ss_pred             CccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                                ....|...|..            ...+++++.|.||.+-.+.
T Consensus       150 ----------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        150 ----------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ----------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                      01346655532            2236999999999988873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.21  E-value=1.1e-10  Score=101.06  Aligned_cols=143  Identities=19%  Similarity=0.157  Sum_probs=88.1

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~~l~~~l~  149 (250)
                      ++|++|||    ||++  .||++++++|+++|++|++.+|+.+..+.+.+..    .+... ..+..+..|.+++.++++
T Consensus         6 ~~k~~lVT----Gas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~g~~~~~~~Dv~d~~~v~~~~~   77 (271)
T PRK06505          6 QGKRGLIM----GVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLA----ESLGSDFVLPCDVEDIASVDAVFE   77 (271)
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHH----HhcCCceEEeCCCCCHHHHHHHHH
Confidence            35789999    9997  9999999999999999999988653221111000    00000 012233445666666654


Q ss_pred             C-----CcccEEEeCCCc------------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCC
Q 025587          150 G-----VTFDVVLDNNGK------------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                      .     ..+|++|||||.                        |+.+..+    ++..+++ + +++|++||.......  
T Consensus        78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~~~~--  153 (271)
T PRK06505         78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGSTRVM--  153 (271)
T ss_pred             HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCccccC--
Confidence            2     258999999983                        2223333    3333432 2 689999987533211  


Q ss_pred             CCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                                +....|++.|..            ...+++++.|.||.+-.+.
T Consensus       154 ----------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        154 ----------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             ----------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence                      112456666632            2236999999999998775

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.20  E-value=1.3e-10  Score=99.82  Aligned_cols=142  Identities=15%  Similarity=0.155  Sum_probs=88.6

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc--CCceEEeC---CHHHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWG---DPAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~---D~~~l~  145 (250)
                      ++|+++||    ||+  +.||++++++|+++|++|++..|+.+.....     ....++..  ..+..+..   |++++.
T Consensus         5 ~~k~~lIt----Gas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~Dl~d~~~v~   75 (258)
T PRK07370          5 TGKKALVT----GIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFE-----KKVRELTEPLNPSLFLPCDVQDDAQIE   75 (258)
T ss_pred             CCcEEEEe----CCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHH-----HHHHHHHhccCcceEeecCcCCHHHHH
Confidence            35789999    986  7999999999999999999887654321100     00001100  11233334   466766


Q ss_pred             hhhcC-----CcccEEEeCCCc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          146 NVVGG-----VTFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      ++++.     ..+|++|||+|.                        |+.+    ++.+++.+++ + ++||++||.....
T Consensus        76 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-~-g~Iv~isS~~~~~  153 (258)
T PRK07370         76 ETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-G-GSIVTLTYLGGVR  153 (258)
T ss_pred             HHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-C-CeEEEEecccccc
Confidence            66542     258999999983                        2223    3444445544 2 6899999965322


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                      +.            +....|++.|...+.            +++++.|.||.+-.+.
T Consensus       154 ~~------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~  198 (258)
T PRK07370        154 AI------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA  198 (258)
T ss_pred             CC------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence            11            112557777743322            6899999999997764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=2e-10  Score=99.75  Aligned_cols=141  Identities=15%  Similarity=0.135  Sum_probs=89.4

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      .+|+||||    ||+  +.||++++++|+++|++|++.+|+.+   ..+.+.+.    +..  ...+..+..|.+++.++
T Consensus         4 ~~k~~lIt----Gas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~----~~~--~~~~~~Dv~d~~~v~~~   73 (274)
T PRK08415          4 KGKKGLIV----GVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQE----LGS--DYVYELDVSKPEHFKSL   73 (274)
T ss_pred             CCcEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh----cCC--ceEEEecCCCHHHHHHH
Confidence            35899999    997  79999999999999999999988742   12211110    000  01123444456666666


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      ++.     .++|++||+||.                        |+.+    ++.++..+++.  ++||++||.+.....
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~  151 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYV  151 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCC
Confidence            532     258999999983                        2223    34444444432  589999986532211


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                  +....|+++|...            ..+++++.|.||.|..+.
T Consensus       152 ------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        152 ------------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             ------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence                        1124577776332            236999999999998764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=2.4e-10  Score=98.15  Aligned_cols=141  Identities=14%  Similarity=0.110  Sum_probs=88.4

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCcc---ccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENS---DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~---~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      .+|++|||    ||+  +.||++++++|+++|++|++++|+.+..   +.+.+.    +..  ...+.++..|.+++.++
T Consensus         9 ~~k~~lIt----Gas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~--~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          9 AGKRGLVV----GIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEE----LDA--PIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHh----hcc--ceEEecCcCCHHHHHHH
Confidence            35899999    998  5999999999999999999999875322   111110    000  00122334456666665


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      ++.     ..+|++|||||.                        |+.+    ++.+++.+++  -+++|++||.......
T Consensus        79 ~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~  156 (258)
T PRK07533         79 FARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVV  156 (258)
T ss_pred             HHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCC
Confidence            532     258999999973                        2223    3334444433  2589999986532111


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                  +....|++.|...            ..+++++.|.||.+-.+.
T Consensus       157 ------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~  199 (258)
T PRK07533        157 ------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA  199 (258)
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence                        1124577666332            236999999999997765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=1.9e-10  Score=99.75  Aligned_cols=143  Identities=19%  Similarity=0.178  Sum_probs=89.4

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      ++|++|||    ||+  +.||++++++|+++|++|++..|+..   ..+.+.+.    +..  ...+..+..|+++++++
T Consensus         9 ~~k~~lIt----Gas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~----~~~--~~~~~~Dl~~~~~v~~~   78 (272)
T PRK08159          9 AGKRGLIL----GVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAE----LGA--FVAGHCDVTDEASIDAV   78 (272)
T ss_pred             cCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHh----cCC--ceEEecCCCCHHHHHHH
Confidence            35799999    996  89999999999999999998877632   12211111    000  00123334456777666


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     ..+|++||+||.                        |+.+...+++++..  .+-+++|++||.+.....  
T Consensus        79 ~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~--  156 (272)
T PRK08159         79 FETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM--  156 (272)
T ss_pred             HHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC--
Confidence            542     258999999972                        34445555554443  123689999986533211  


Q ss_pred             CCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                +....|+++|...            ..+++++.|.||.+..+.
T Consensus       157 ----------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  199 (272)
T PRK08159        157 ----------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLA  199 (272)
T ss_pred             ----------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHH
Confidence                      1124567666332            226999999999997754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.18  E-value=2.2e-10  Score=98.55  Aligned_cols=139  Identities=15%  Similarity=0.146  Sum_probs=86.6

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeC---CHHHH
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l  144 (250)
                      ++|++|||    ||  ++.||++++++|+++|++|++..|...   ..+++.+.        . .....+.+   |++++
T Consensus         5 ~~k~~lIT----Ga~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~Dv~~~~~v   71 (261)
T PRK08690          5 QGKKILIT----GMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAE--------L-DSELVFRCDVASDDEI   71 (261)
T ss_pred             CCcEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhc--------c-CCceEEECCCCCHHHH
Confidence            35789999    96  679999999999999999998876532   11111110        0 11223444   47777


Q ss_pred             HhhhcC-----CcccEEEeCCCcC-------------------------HHhH----HHHHHHHHhCCCCEEEEEcCccc
Q 025587          145 GNVVGG-----VTFDVVLDNNGKN-------------------------LDAV----RPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       145 ~~~l~~-----~~~d~Vi~~ag~~-------------------------~~~~----~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      +++++.     .++|++|||||+.                         +.+.    +.++..+++. -++||++||.+.
T Consensus        72 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~  150 (261)
T PRK08690         72 NQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGA  150 (261)
T ss_pred             HHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccc
Confidence            766542     2599999999831                         1122    2223333333 368999998764


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                      +....            ....|++.|..            .+.+++++.|.||.+-.+.
T Consensus       151 ~~~~~------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~  197 (261)
T PRK08690        151 VRAIP------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLA  197 (261)
T ss_pred             ccCCC------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchh
Confidence            42211            12446666632            2347999999999998764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.17  E-value=7.6e-11  Score=101.60  Aligned_cols=34  Identities=21%  Similarity=0.236  Sum_probs=31.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      +.++||    ||+|+||++++++|+++|++|+++.|..
T Consensus         2 ~~~lIT----Gas~gIG~~~a~~l~~~G~~V~~~~~~~   35 (267)
T TIGR02685         2 PAAVVT----GAAKRIGSSIAVALHQEGYRVVLHYHRS   35 (267)
T ss_pred             CEEEEe----CCCCcHHHHHHHHHHhCCCeEEEEcCCc
Confidence            479999    9999999999999999999999987653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.13  E-value=6.9e-10  Score=95.79  Aligned_cols=143  Identities=14%  Similarity=0.147  Sum_probs=86.7

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      ++|++|||    ||++  .||++++++|+++|++|++.+|+..   ..+.+...    ...  ...+.++..|+++++++
T Consensus         5 ~~k~~lIT----Gas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~----~~~--~~~~~~Dl~~~~~v~~~   74 (262)
T PRK07984          5 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ----LGS--DIVLPCDVAEDASIDAM   74 (262)
T ss_pred             CCCEEEEe----CCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc----cCC--ceEeecCCCCHHHHHHH
Confidence            35789999    9985  9999999999999999999888631   11111111    000  00122334457777766


Q ss_pred             hcC-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCC
Q 025587          148 VGG-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~  195 (250)
                      ++.     .++|++||+||.                         |+.+...+.+++..  ..-.++|++||.+...+. 
T Consensus        75 ~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~-  153 (262)
T PRK07984         75 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI-  153 (262)
T ss_pred             HHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC-
Confidence            642     258999999983                         12222223333221  112589999987632211 


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                 +....|+++|...+            .+++++.|.||.+..+.
T Consensus       154 -----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (262)
T PRK07984        154 -----------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA  196 (262)
T ss_pred             -----------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchH
Confidence                       11245777773332            26999999999997763

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.13  E-value=1.5e-10  Score=99.11  Aligned_cols=142  Identities=19%  Similarity=0.169  Sum_probs=90.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHh----CCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhh
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~----~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .||||    ||+++||.+++++|++    .|++|+++.|+.+..+.+.+.    +.. .....+.++.+|   .+++.++
T Consensus         2 ~vlIt----Gas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVT----GASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAE----IGAERSGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEe----cCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHH----HHhcCCCceEEEEEeccCCHHHHHHH
Confidence            58999    9999999999999997    799999999987654432211    000 011234444444   6666555


Q ss_pred             hcC---------CcccEEEeCCCc-----------------------CHHh----HHHHHHHHHhC-C-CCEEEEEcCcc
Q 025587          148 VGG---------VTFDVVLDNNGK-----------------------NLDA----VRPVADWAKSS-G-VKQFLFISSAG  189 (250)
Q Consensus       148 l~~---------~~~d~Vi~~ag~-----------------------~~~~----~~~ll~~~~~~-~-~~~~v~iSS~~  189 (250)
                      ++.         ...|+|||+||.                       |+.+    ++.+++.+++. + .++||++||..
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            432         123689999982                       2223    33444555443 2 35899999976


Q ss_pred             cccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       190 vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                      .+.+..            ....|++.|...+.            +++++.+.||.+-.+.
T Consensus       154 ~~~~~~------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~  201 (256)
T TIGR01500       154 AIQPFK------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM  201 (256)
T ss_pred             hCCCCC------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence            543221            12568777744332            5899999999997764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.13  E-value=4.6e-10  Score=91.07  Aligned_cols=148  Identities=15%  Similarity=0.085  Sum_probs=93.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .+.+..+||    ||...||+++++.|.++|++|.+.+++....+.-.+.    +... ...-..++..++++++..++.
T Consensus        12 ~~sk~~~vt----Gg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~----L~g~~~h~aF~~DVS~a~~v~~~l~e   83 (256)
T KOG1200|consen   12 LMSKVAAVT----GGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGD----LGGYGDHSAFSCDVSKAHDVQNTLEE   83 (256)
T ss_pred             HhcceeEEe----cCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhh----cCCCCccceeeeccCcHHHHHHHHHH
Confidence            356789999    9999999999999999999999999887544432211    0000 001122333345555554432


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh------CCCCEEEEEcCcccccCCCCCCc
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS------SGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~------~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                           ..++++++|||+                    |+.++..+-+++-+      .+.-+||.+||+--...+-+   
T Consensus        84 ~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G---  160 (256)
T KOG1200|consen   84 MEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG---  160 (256)
T ss_pred             HHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---
Confidence                 269999999993                    44454444444332      22338999999532111111   


Q ss_pred             cCCCCCCCCCChhHH------------HHHHHHhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQV------------EKYISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~------------~k~~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|++            .|.++..+++++++.||+|-.|+..
T Consensus       161 ---------QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~  203 (256)
T KOG1200|consen  161 ---------QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE  203 (256)
T ss_pred             ---------chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh
Confidence                     133443            3455666899999999999999754

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.13  E-value=5.7e-10  Score=98.45  Aligned_cols=151  Identities=15%  Similarity=0.129  Sum_probs=91.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC--CCCCCcc-cchh--cCCceEEeCC---HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK--KPPFNRF-NEIV--SAGGKTVWGD---PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~--~~~~~~~-~~~~--~~~v~~v~~D---~~~l  144 (250)
                      .+|++|||    ||+++||++++++|+++|++|++++|+.+...+..  ....... ..+.  ...+..+.+|   ++++
T Consensus         7 ~~k~~lIT----Ggs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          7 RGKVALVA----GATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            45899999    99999999999999999999999999753211000  0000000 0111  1123444555   6666


Q ss_pred             HhhhcC-----CcccEEEeCC-Cc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcCccc
Q 025587          145 GNVVGG-----VTFDVVLDNN-GK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       145 ~~~l~~-----~~~d~Vi~~a-g~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      .++++.     ..+|++||++ |.                        |+.+    ++.++..+++.+-++||++||...
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~  162 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence            666542     2589999999 52                        1112    344555555544579999998542


Q ss_pred             -ccCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          191 -YKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       191 -y~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                       +....          .+....|++.|...            ..+++++.|.||.|-.+.
T Consensus       163 ~~~~~~----------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~  212 (305)
T PRK08303        163 EYNATH----------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM  212 (305)
T ss_pred             cccCcC----------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence             21110          00124477776332            236999999999997764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.12  E-value=8.1e-10  Score=94.82  Aligned_cols=138  Identities=13%  Similarity=0.109  Sum_probs=86.3

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeC---CHHHHH
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~  145 (250)
                      .+|+++||    ||  ++.||.+++++|+++|++|++++|+.  +..+++.+.        ....+..+.+   |++++.
T Consensus         6 ~~k~~lIt----Ga~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~i~   73 (256)
T PRK07889          6 EGKRILVT----GVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKR--------LPEPAPVLELDVTNEEHLA   73 (256)
T ss_pred             cCCEEEEe----CCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHh--------cCCCCcEEeCCCCCHHHHH
Confidence            45799999    98  89999999999999999999998764  222222111        0112334444   466666


Q ss_pred             hhhcC-----CcccEEEeCCCcC------------------------HHh----HHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          146 NVVGG-----VTFDVVLDNNGKN------------------------LDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~~------------------------~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      ++++.     .++|++||+||..                        +.+    ++.+++.+++  -+++|++++.+..+
T Consensus        74 ~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~~  151 (256)
T PRK07889         74 SLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATVA  151 (256)
T ss_pred             HHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeeccccc
Confidence            66532     2599999999832                        222    2333444433  25789887533110


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                   .+....|+++|...            +.+++++.|.||.+..+.
T Consensus       152 -------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        152 -------------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             -------------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence                         01124466666322            236999999999998875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.11  E-value=3.4e-10  Score=97.39  Aligned_cols=143  Identities=15%  Similarity=0.094  Sum_probs=86.8

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      ++|++|||    ||++  .||++++++|+++|++|++.+|+.+   ..+.+.+.    +..  ...+.++..|+++++++
T Consensus         7 ~~k~~lIT----Gas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~----~g~--~~~~~~Dv~~~~~v~~~   76 (260)
T PRK06603          7 QGKKGLIT----GIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE----IGC--NFVSELDVTNPKSISNL   76 (260)
T ss_pred             CCcEEEEE----CCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh----cCC--ceEEEccCCCHHHHHHH
Confidence            35789999    9997  8999999999999999999887632   11111110    000  00123344457777666


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     .++|++||++|.                        |+.+...+++.+..  ..-+++|++||........ 
T Consensus        77 ~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-  155 (260)
T PRK06603         77 FDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP-  155 (260)
T ss_pred             HHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC-
Confidence            642     259999999872                        22233333332221  1125899999965432111 


Q ss_pred             CCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                 ....|+++|...            +.+++++.+.||.+-.+.
T Consensus       156 -----------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  197 (260)
T PRK06603        156 -----------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA  197 (260)
T ss_pred             -----------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence                       124466666322            236999999999997764

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.10  E-value=9.9e-10  Score=100.35  Aligned_cols=92  Identities=18%  Similarity=0.210  Sum_probs=64.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|+|+||    ||+|+||++++++|+++|++|++++|+++.........     ......+..+..|.+++.+.+++  
T Consensus       177 ~gK~VLIT----GASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-----~~~v~~v~~Dvsd~~~v~~~l~~--  245 (406)
T PRK07424        177 KGKTVAVT----GASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-----DLPVKTLHWQVGQEAALAELLEK--  245 (406)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-----CCCeEEEEeeCCCHHHHHHHhCC--
Confidence            46899999    99999999999999999999999999865432111000     00001123444568888888875  


Q ss_pred             ccEEEeCCC-----------------cCHHhHHHHHHHHH
Q 025587          153 FDVVLDNNG-----------------KNLDAVRPVADWAK  175 (250)
Q Consensus       153 ~d~Vi~~ag-----------------~~~~~~~~ll~~~~  175 (250)
                      +|++||+||                 +|+.++.++++++.
T Consensus       246 IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~l  285 (406)
T PRK07424        246 VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFF  285 (406)
T ss_pred             CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999998                 25666666666653

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.09  E-value=5.2e-10  Score=96.81  Aligned_cols=153  Identities=14%  Similarity=0.064  Sum_probs=110.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-------HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-------~~~l~  145 (250)
                      .++-.+||    |||.+||++.+++|+++|++|+++.|+.++++..+++-.+    .....+.++..|       .+.+.
T Consensus        48 ~g~WAVVT----GaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~----~~~vev~~i~~Dft~~~~~ye~i~  119 (312)
T KOG1014|consen   48 LGSWAVVT----GATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEE----KYKVEVRIIAIDFTKGDEVYEKLL  119 (312)
T ss_pred             cCCEEEEE----CCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH----HhCcEEEEEEEecCCCchhHHHHH
Confidence            34678999    9999999999999999999999999999888876544221    122334455555       55677


Q ss_pred             hhhcCCcccEEEeCCC----------------------cC----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          146 NVVGGVTFDVVLDNNG----------------------KN----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------------~~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.+.+.++-++|||+|                      +|    ...++-++.-|.+.+-+-+|++||...--+      
T Consensus       120 ~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p------  193 (312)
T KOG1014|consen  120 EKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP------  193 (312)
T ss_pred             HHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc------
Confidence            7788888889999999                      12    234666777777777778999999663222      


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCCCCcccc
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNNKDCEEW  245 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~~~~~~~  245 (250)
                            .|..+.|+++|..            ...|+.+..+-|..|-+++.......+
T Consensus       194 ------~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~sl  245 (312)
T KOG1014|consen  194 ------TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPSL  245 (312)
T ss_pred             ------ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCCC
Confidence                  2224678877742            223688999999999998765544333

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.09  E-value=1e-09  Score=94.43  Aligned_cols=143  Identities=17%  Similarity=0.151  Sum_probs=87.2

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCC---CccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      +.|+||||    ||  ++.||++++++|+++|++|+++.|..   +..+.+.+.    +..  ...+.++..|++++.++
T Consensus         5 ~~k~vlIt----Gas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          5 AGKRILIT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE----FGS--DLVFPCDVASDEQIDAL   74 (260)
T ss_pred             CCcEEEEe----CCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHh----cCC--cceeeccCCCHHHHHHH
Confidence            35799999    96  67999999999999999999886542   222211110    000  01133444567777777


Q ss_pred             hcC-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCC
Q 025587          148 VGG-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~  195 (250)
                      ++.     .++|++||+||.                         |+.+...+.+++..  .+-+++|++||....... 
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~-  153 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV-  153 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC-
Confidence            642     259999999983                         11222222333222  123689999986543211 


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                 +....|++.|...+            .+++++.|.||.+-.+.
T Consensus       154 -----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~  196 (260)
T PRK06997        154 -----------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLA  196 (260)
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccch
Confidence                       11245777773332            26999999999987754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.09  E-value=4e-10  Score=93.46  Aligned_cols=143  Identities=18%  Similarity=0.222  Sum_probs=97.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|++++|    ||.|+||+++.++|+++|..+.+++-+.|..+.+.+...    ......+.++..|   ..+++++++
T Consensus         4 tGKna~vt----ggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~a----i~p~~~v~F~~~DVt~~~~~~~~f~   75 (261)
T KOG4169|consen    4 TGKNALVT----GGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQA----INPSVSVIFIKCDVTNRGDLEAAFD   75 (261)
T ss_pred             cCceEEEe----cCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhc----cCCCceEEEEEeccccHHHHHHHHH
Confidence            47899999    999999999999999999998888877766554332210    0122334566666   555555554


Q ss_pred             C-----CcccEEEeCCCc------------C----HHhHHHHHHHHHhCC---CCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK------------N----LDAVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------~----~~~~~~ll~~~~~~~---~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      .     ..+|++||.||+            |    +.+|...++++.+..   .+-+|.+||..-..+....        
T Consensus        76 ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~--------  147 (261)
T KOG4169|consen   76 KILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF--------  147 (261)
T ss_pred             HHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc--------
Confidence            2     249999999993            2    446777888887722   4579999995533332222        


Q ss_pred             CCCCChhHHHH--------------HHHHhCCcEEEEecCeeec
Q 025587          206 KPDAGHVQVEK--------------YISENFSNWASFRPQYMIG  235 (250)
Q Consensus       206 ~~~~~~y~~~k--------------~~~e~~~~~~ilRp~~i~G  235 (250)
                          ..|+++|              +.+..|+++..++||.+-.
T Consensus       148 ----pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t  187 (261)
T KOG4169|consen  148 ----PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRT  187 (261)
T ss_pred             ----hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchH
Confidence                3355444              5666789999999997643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.08  E-value=3.2e-09  Score=89.44  Aligned_cols=139  Identities=17%  Similarity=0.077  Sum_probs=84.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|+||    ||+|+||++++++|+++|  +.|....|+....             .....+.++.+|   .+++.++.+
T Consensus         1 ~~vlIt----Gas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------------~~~~~~~~~~~Dls~~~~~~~~~~   63 (235)
T PRK09009          1 MNILIV----GGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------------FQHDNVQWHALDVTDEAEIKQLSE   63 (235)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------------cccCceEEEEecCCCHHHHHHHHH
Confidence            589999    999999999999999985  5565555544211             011234445555   556555443


Q ss_pred             C-CcccEEEeCCCcC--------------------------HH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          150 G-VTFDVVLDNNGKN--------------------------LD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-~~~d~Vi~~ag~~--------------------------~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      . ..+|+|||++|..                          +.    .++.+++.+++.+.++++++||..  +.....+
T Consensus        64 ~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~~  141 (235)
T PRK09009         64 QFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDNR  141 (235)
T ss_pred             hcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccCC
Confidence            2 2489999999842                          11    233444555555567899998732  1111100


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~~~  239 (250)
                             .+....|++.|...+              .+++++.+.||.+.++...
T Consensus       142 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~  189 (235)
T PRK09009        142 -------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK  189 (235)
T ss_pred             -------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc
Confidence                   011235665553222              2578999999999888643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.08  E-value=1.6e-09  Score=94.00  Aligned_cols=149  Identities=21%  Similarity=0.159  Sum_probs=95.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      -.+|.+|||    ||+..||++++++|++.|.+|++.+|+.+..+...+....  .......+..+.+|   .+++.+++
T Consensus         6 l~gkvalVT----G~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~~~~l~   79 (270)
T KOG0725|consen    6 LAGKVALVT----GGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGG--LGYTGGKVLAIVCDVSKEVDVEKLV   79 (270)
T ss_pred             CCCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCCCeeEEEECcCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999998764432211000  00012234555666   34443333


Q ss_pred             ----cC--CcccEEEeCCC---------------------cCHHh-HHHHH----HHHHhCCCCEEEEEcCcccccCCCC
Q 025587          149 ----GG--VTFDVVLDNNG---------------------KNLDA-VRPVA----DWAKSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       149 ----~~--~~~d~Vi~~ag---------------------~~~~~-~~~ll----~~~~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                          +.  .++|++|++||                     +|+.+ ...+.    ..+++.+...++++||...+.....
T Consensus        80 ~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~  159 (270)
T KOG0725|consen   80 EFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG  159 (270)
T ss_pred             HHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC
Confidence                22  35999999999                     24442 33333    3333446678999999765443221


Q ss_pred             CCccCCCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~  237 (250)
                      .+           ..|++.|.            +..++++++.+-||.|..+.
T Consensus       160 ~~-----------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  160 SG-----------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             Cc-----------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            10           23555553            23337999999999999986

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.07  E-value=1.1e-09  Score=89.98  Aligned_cols=142  Identities=21%  Similarity=0.148  Sum_probs=98.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l~~~l~  149 (250)
                      ..++||||   +++.|+||.+|++++.++||.|++..|..+..+++..          ..++.   .+..|++++.++.+
T Consensus         6 ~~k~VlIt---gcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~----------~~gl~~~kLDV~~~~~V~~v~~   72 (289)
T KOG1209|consen    6 QPKKVLIT---GCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI----------QFGLKPYKLDVSKPEEVVTVSG   72 (289)
T ss_pred             CCCeEEEe---ecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH----------hhCCeeEEeccCChHHHHHHHH
Confidence            45789999   3457999999999999999999999999887766542          12333   33445666666543


Q ss_pred             ------CCcccEEEeCCC--------------------cCHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 ------GVTFDVVLDNNG--------------------KNLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ------~~~~d~Vi~~ag--------------------~~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                            ..+.|+++|+||                    +|+.|    ++.+.....++ -+.||+++|...|.+-..   
T Consensus        73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfpf---  148 (289)
T KOG1209|consen   73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFPF---  148 (289)
T ss_pred             HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccch---
Confidence                  236899999999                    24444    34444444443 358999999887765322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~~  240 (250)
                               .+.|.++|.+.-.            |++++-+-+|+|-..-.++
T Consensus       149 ---------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  149 ---------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ---------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                     3778888865433            5778888888887765554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.06  E-value=1.9e-10  Score=91.70  Aligned_cols=126  Identities=21%  Similarity=0.227  Sum_probs=84.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcC--CCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVG--DENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~--~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+||||    ||++.||++++++|+++| +.|+++.|+  .+....+.+.    +. -....+.++.+|   .+++.+++
T Consensus         1 k~~lIt----Ga~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~   71 (167)
T PF00106_consen    1 KTVLIT----GASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQE----LK-APGAKITFIECDLSDPESIRALI   71 (167)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHH----HH-HTTSEEEEEESETTSHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccc----cc-ccccccccccccccccccccccc
Confidence            689999    999999999999999995 677888888  2222221100    01 012345566665   66666655


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      +.     ..+|++||++|                    .|+.+...+.+++...+-++||++||.....+...       
T Consensus        72 ~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  144 (167)
T PF00106_consen   72 EEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG-------  144 (167)
T ss_dssp             HHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT-------
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC-------
Confidence            42     35999999999                    24455666666666556779999999775543322       


Q ss_pred             CCCCCCChhHHHHHHHHh
Q 025587          204 VVKPDAGHVQVEKYISEN  221 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e~  221 (250)
                           ...|.+.|...+.
T Consensus       145 -----~~~Y~askaal~~  157 (167)
T PF00106_consen  145 -----MSAYSASKAALRG  157 (167)
T ss_dssp             -----BHHHHHHHHHHHH
T ss_pred             -----ChhHHHHHHHHHH
Confidence                 3679988876554

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN00015 protochlorophyllide reductase

Probab=99.05  E-value=9.5e-10  Score=96.99  Aligned_cols=105  Identities=20%  Similarity=0.206  Sum_probs=69.6

Q ss_pred             EEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEE---eCCHHHHHhhhcC---
Q 025587           78 LIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV---WGDPAEVGNVVGG---  150 (250)
Q Consensus        78 lVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v---~~D~~~l~~~l~~---  150 (250)
                      |||    ||+++||.+++++|+++| ++|++..|+.+..+.....    +. .....+.++   ..|.+++.++++.   
T Consensus         1 lIT----Gas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   71 (308)
T PLN00015          1 IIT----GASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKS----AG-MPKDSYTVMHLDLASLDSVRQFVDNFRR   71 (308)
T ss_pred             CEe----CCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH----hc-CCCCeEEEEEecCCCHHHHHHHHHHHHh
Confidence            689    999999999999999999 9999999987544322111    00 001123333   4456666655532   


Q ss_pred             --CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCcccc
Q 025587          151 --VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIY  191 (250)
Q Consensus       151 --~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy  191 (250)
                        ..+|++||+||+                     |+.+    ++.+++.+++.+  .++||++||...+
T Consensus        72 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         72 SGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             cCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence              258999999983                     2333    455566666654  4799999997653

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.02  E-value=2.5e-09  Score=94.48  Aligned_cols=159  Identities=19%  Similarity=0.120  Sum_probs=101.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ...++++||    ||+.+||.+++++|+++|.+|++..|+.+..+...+.-..   +.....+.++..|   .+++.+..
T Consensus        33 ~~~~~~vVT----GansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~---~~~~~~i~~~~lDLssl~SV~~fa  105 (314)
T KOG1208|consen   33 LSGKVALVT----GATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK---GKANQKIRVIQLDLSSLKSVRKFA  105 (314)
T ss_pred             CCCcEEEEE----CCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh---cCCCCceEEEECCCCCHHHHHHHH
Confidence            345899999    9999999999999999999999999997544332211000   1233455566777   44444433


Q ss_pred             c-----CCcccEEEeCCCc------------------CH----HhHHHHHHHHHhCCCCEEEEEcCccc-ccCCCCCCcc
Q 025587          149 G-----GVTFDVVLDNNGK------------------NL----DAVRPVADWAKSSGVKQFLFISSAGI-YKPADEPPHV  200 (250)
Q Consensus       149 ~-----~~~~d~Vi~~ag~------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~v-y~~~~~~~~~  200 (250)
                      +     ....|++|++||+                  |.    ..+..+++.++.....|||++||... .....+....
T Consensus       106 ~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~  185 (314)
T KOG1208|consen  106 EEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSG  185 (314)
T ss_pred             HHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccc
Confidence            2     2368999999992                  33    34777888888766579999999764 1111111111


Q ss_pred             CCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                      |..........|+.+|.....           ++....+-||.+.++.
T Consensus       186 ~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  186 EKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             hhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            111101111237766643321           6899999999998884

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.99  E-value=2.8e-09  Score=90.63  Aligned_cols=132  Identities=14%  Similarity=0.010  Sum_probs=88.8

Q ss_pred             HHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC--cccEEEeCCC----------
Q 025587           94 LAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--TFDVVLDNNG----------  161 (250)
Q Consensus        94 l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~--~~d~Vi~~ag----------  161 (250)
                      ++++|+++|++|++++|+.+....             ..-+..+..|.+++.++++..  ++|+|||+||          
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~   67 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV   67 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence            478899999999999998754210             011334455778888777642  5899999998          


Q ss_pred             --cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCC---------------CCCCCCCChhHHHHHHH---
Q 025587          162 --KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG---------------DVVKPDAGHVQVEKYIS---  219 (250)
Q Consensus       162 --~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~---------------~~~~~~~~~y~~~k~~~---  219 (250)
                        +|+.++..+++++.+.  ..++||++||...|+.....+..+.               ....+....|+++|...   
T Consensus        68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  147 (241)
T PRK12428         68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILW  147 (241)
T ss_pred             hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHH
Confidence              3677888888877652  2369999999988864322111110               01122336788887432   


Q ss_pred             ----------HhCCcEEEEecCeeecCCC
Q 025587          220 ----------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       220 ----------e~~~~~~ilRp~~i~G~~~  238 (250)
                                ..++++++|+||.+.++..
T Consensus       148 ~~~la~~e~~~~girvn~v~PG~v~T~~~  176 (241)
T PRK12428        148 TMRQAQPWFGARGIRVNCVAPGPVFTPIL  176 (241)
T ss_pred             HHHHHHHhhhccCeEEEEeecCCccCccc
Confidence                      2369999999999999864

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.97  E-value=1.1e-08  Score=88.69  Aligned_cols=145  Identities=19%  Similarity=0.176  Sum_probs=94.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l~~~l  148 (250)
                      ...|-||||    |.....|+.++++|.++|+.|.+-.-.++..+.+...-       ......   .+..+++++.++.
T Consensus        27 ~~~k~VlIT----GCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~-------~s~rl~t~~LDVT~~esi~~a~   95 (322)
T KOG1610|consen   27 LSDKAVLIT----GCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET-------KSPRLRTLQLDVTKPESVKEAA   95 (322)
T ss_pred             cCCcEEEEe----cCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh-------cCCcceeEeeccCCHHHHHHHH
Confidence            345789999    99999999999999999999999886666655543331       022333   3444577776664


Q ss_pred             -------cCCcccEEEeCCCc---------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCC
Q 025587          149 -------GGVTFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       149 -------~~~~~d~Vi~~ag~---------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                             ++...-.||||||+                     |..    -|+.++...+++. +|+|++||++---+.+ 
T Consensus        96 ~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p-  173 (322)
T KOG1610|consen   96 QWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALP-  173 (322)
T ss_pred             HHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCc-
Confidence                   33457799999992                     333    4667777777765 5999999976311110 


Q ss_pred             CCccCCCCCCC-CCChhHHHHHHH-------HhCCcEEEEecCeeecC
Q 025587          197 PPHVEGDVVKP-DAGHVQVEKYIS-------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       197 ~~~~e~~~~~~-~~~~y~~~k~~~-------e~~~~~~ilRp~~i~G~  236 (250)
                             ...+ ..++|++|.+..       ..|+++.+|-||..-.+
T Consensus       174 -------~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  174 -------ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             -------ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence                   0111 124555544332       22799999999944433

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.95  E-value=1.2e-08  Score=83.56  Aligned_cols=138  Identities=20%  Similarity=0.199  Sum_probs=92.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHH----Hh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEV----GN  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l----~~  146 (250)
                      +.+||||    ||+.+||..+++++++.|-+|++..|+++.+.+.++.         .+++.   ++.+|.+..    +.
T Consensus         5 gnTiLIT----GG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---------~p~~~t~v~Dv~d~~~~~~lvew   71 (245)
T COG3967           5 GNTILIT----GGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---------NPEIHTEVCDVADRDSRRELVEW   71 (245)
T ss_pred             CcEEEEe----CCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---------CcchheeeecccchhhHHHHHHH
Confidence            4689999    9999999999999999999999999998776654332         12333   344453332    33


Q ss_pred             hhcCC-cccEEEeCCCc----------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          147 VVGGV-TFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       147 ~l~~~-~~d~Vi~~ag~----------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.+.+ ..+++|+|||+                      |+.+    +..+++.+.+..-.-+|.+||.-.+-+....  
T Consensus        72 Lkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~--  149 (245)
T COG3967          72 LKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST--  149 (245)
T ss_pred             HHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc--
Confidence            33333 48999999992                      3334    4444555555555679999996655443332  


Q ss_pred             cCCCCCCCCCChhHHHH--------HHHHh----CCcEEEEecCeeecC
Q 025587          200 VEGDVVKPDAGHVQVEK--------YISEN----FSNWASFRPQYMIGS  236 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k--------~~~e~----~~~~~ilRp~~i~G~  236 (250)
                                ..|++.|        .|+++    ++++.-+-|+.|-.+
T Consensus       150 ----------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 ----------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ----------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                      2355555        33332    588888899988886

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.95  E-value=1.4e-08  Score=89.57  Aligned_cols=149  Identities=11%  Similarity=0.068  Sum_probs=87.1

Q ss_pred             ccCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC----CCCcccchhcC----CceEEeCC-
Q 025587           72 AEKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP----PFNRFNEIVSA----GGKTVWGD-  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~----~~~~~~~~~~~----~v~~v~~D-  140 (250)
                      .++|++|||    ||  +..||+++++.|+++|++|++ .|..+.++.+...    ...........    ....+..| 
T Consensus         7 l~gk~alIT----Ga~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          7 LRGKRAFIA----GVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            457899999    99  799999999999999999988 6654433222100    00000000000    01122222 


Q ss_pred             ----------------------HHHHHhhhcC-----CcccEEEeCCC----------------------cCHHh----H
Q 025587          141 ----------------------PAEVGNVVGG-----VTFDVVLDNNG----------------------KNLDA----V  167 (250)
Q Consensus       141 ----------------------~~~l~~~l~~-----~~~d~Vi~~ag----------------------~~~~~----~  167 (250)
                                            .+++.++++.     .++|++|||||                      +|+.+    +
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence                                  2245555432     25899999995                      23333    4


Q ss_pred             HHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHH------------H-hCCcEEEEecCeee
Q 025587          168 RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------E-NFSNWASFRPQYMI  234 (250)
Q Consensus       168 ~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e-~~~~~~ilRp~~i~  234 (250)
                      +.++..+++.  +++|++||.........           ....|+++|...            + .+++++.|.||.+-
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~~~p~-----------~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~  228 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASERIIPG-----------YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG  228 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcCCCCC-----------CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence            4455555543  68999999654322111           012477666222            2 36899999999998


Q ss_pred             cCCC
Q 025587          235 GSGN  238 (250)
Q Consensus       235 G~~~  238 (250)
                      .+..
T Consensus       229 T~~~  232 (303)
T PLN02730        229 SRAA  232 (303)
T ss_pred             Cchh
Confidence            8754

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.92  E-value=2.6e-09  Score=88.68  Aligned_cols=144  Identities=19%  Similarity=0.192  Sum_probs=95.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--HHH-HHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAE-VGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~~~-l~~~l~~~  151 (250)
                      .++++.    |+.||.|.++++...+.|+.|.++.|+..+.. +.         -....+.+..+|  ..+ +...+.+ 
T Consensus        53 e~tlvl----ggnpfsgs~vlk~A~~vv~svgilsen~~k~~-l~---------sw~~~vswh~gnsfssn~~k~~l~g-  117 (283)
T KOG4288|consen   53 EWTLVL----GGNPFSGSEVLKNATNVVHSVGILSENENKQT-LS---------SWPTYVSWHRGNSFSSNPNKLKLSG-  117 (283)
T ss_pred             HHHhhh----cCCCcchHHHHHHHHhhceeeeEeecccCcch-hh---------CCCcccchhhccccccCcchhhhcC-
Confidence            478999    99999999999999999999999999864211 00         111223444444  112 3333334 


Q ss_pred             cccEEEeCCC----------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh
Q 025587          152 TFDVVLDNNG----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (250)
Q Consensus       152 ~~d~Vi~~ag----------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~  221 (250)
                       +..|+.++|          +|-+...+.+.++.++|+++|+|||... |+..   |   -.+.....++..+|..+...
T Consensus       118 -~t~v~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---~---~i~rGY~~gKR~AE~Ell~~  189 (283)
T KOG4288|consen  118 -PTFVYEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---P---LIPRGYIEGKREAEAELLKK  189 (283)
T ss_pred             -CcccHHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---C---ccchhhhccchHHHHHHHHh
Confidence             677777776          4555677788899999999999999743 2211   1   11112223566666655543


Q ss_pred             -CCcEEEEecCeeecCCCCCC
Q 025587          222 -FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       222 -~~~~~ilRp~~i~G~~~~~~  241 (250)
                       ..+-+++|||+|||.+.-.+
T Consensus       190 ~~~rgiilRPGFiyg~R~v~g  210 (283)
T KOG4288|consen  190 FRFRGIILRPGFIYGTRNVGG  210 (283)
T ss_pred             cCCCceeeccceeecccccCc
Confidence             58899999999999965443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.87  E-value=3.8e-09  Score=84.39  Aligned_cols=144  Identities=19%  Similarity=0.151  Sum_probs=96.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH---HHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP---AEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~---~~l~~~l~  149 (250)
                      .++.|++|    |+..+||+.+++.|.+.|..|+++.|+++.+..+-++.        ..-++-+.+|.   +.+.+.+.
T Consensus         6 aG~~vlvT----gagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------p~~I~Pi~~Dls~wea~~~~l~   73 (245)
T KOG1207|consen    6 AGVIVLVT----GAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------PSLIIPIVGDLSAWEALFKLLV   73 (245)
T ss_pred             cceEEEee----cccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------CcceeeeEecccHHHHHHHhhc
Confidence            46789999    99999999999999999999999999997766543321        12255666674   44444443


Q ss_pred             C-CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 G-VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~-~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      . ..+|.++++||                    +|+.+..++.+..    ...+ .+.||.+||.+..-+-+.       
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n-------  146 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN-------  146 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC-------
Confidence            2 36899999999                    2444444444442    2222 346999999664332222       


Q ss_pred             CCCCCCChhHHHHHHHH---------hC---CcEEEEecCeeecCCCCC
Q 025587          204 VVKPDAGHVQVEKYISE---------NF---SNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e---------~~---~~~~ilRp~~i~G~~~~~  240 (250)
                           .+.|++.|...+         .|   |+++.+.|..+...+...
T Consensus       147 -----HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d  190 (245)
T KOG1207|consen  147 -----HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD  190 (245)
T ss_pred             -----ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccc
Confidence                 255766664333         23   899999999998876543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.83  E-value=4.3e-08  Score=85.08  Aligned_cols=145  Identities=20%  Similarity=0.197  Sum_probs=95.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEe---CCHHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVW---GDPAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~---~D~~~l~~~l~~  150 (250)
                      .+|+||    ||+..+|..++.++..+|++|+++.|+.++..+..+.-    .... ..++.+.-   .|.+.+.+++++
T Consensus        34 ~hi~it----ggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l----~l~~~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   34 RHILIT----GGSSGLGLALALECKREGADVTITARSGKKLLEAKAEL----ELLTQVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             ceEEEe----cCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhh----hhhhccceeeEeccccccHHHHHHHHhh
Confidence            689999    99999999999999999999999999987766544321    1011 11133333   457777777765


Q ss_pred             C-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcc----cccCCCC
Q 025587          151 V-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAG----IYKPADE  196 (250)
Q Consensus       151 ~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~----vy~~~~~  196 (250)
                      .     .+|.+|+|||                    +|..++.+++.++    ++.. .++|+++||..    +||-...
T Consensus       106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY  185 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY  185 (331)
T ss_pred             hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc
Confidence            4     6999999999                    4666666666554    3322 45899988842    3332111


Q ss_pred             CCccCCCCCCCCCChhH-------HHHHHHHhCCcEEEEecCeeecCCC
Q 025587          197 PPHVEGDVVKPDAGHVQ-------VEKYISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~-------~~k~~~e~~~~~~ilRp~~i~G~~~  238 (250)
                      -           .++++       ..+.+.+.++.++..-|+.+-.|+.
T Consensus       186 s-----------~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGf  223 (331)
T KOG1210|consen  186 S-----------PSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGF  223 (331)
T ss_pred             c-----------cHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcc
Confidence            1           02222       2223334478899999998888864

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.82  E-value=3.3e-08  Score=80.72  Aligned_cols=137  Identities=17%  Similarity=0.171  Sum_probs=88.0

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhhhc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|||    ||.|.||..+++.|+++| .+|+++.|+.......    ...+.++.  ...+.++.+|   ++++.+++.
T Consensus         2 tylit----GG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~----~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~   73 (181)
T PF08659_consen    2 TYLIT----GGLGGLGQSLARWLAERGARRLILLGRSGAPSAEA----EAAIRELESAGARVEYVQCDVTDPEAVAAALA   73 (181)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTH----HHHHHHHHHTT-EEEEEE--TTSHHHHHHHHH
T ss_pred             EEEEE----CCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHH----HHHHHHHHhCCCceeeeccCccCHHHHHHHHH
Confidence            68999    999999999999999998 5799999983111100    01112222  2334555555   888888875


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHHHhCCCCEEEEEcCcc-cccCCCCCCccCCC
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAG-IYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~~~~~~v~iSS~~-vy~~~~~~~~~e~~  203 (250)
                      ..     +++.|||++|.                    .+.++.++.+++....++.||++||+. ++|...        
T Consensus        74 ~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g--------  145 (181)
T PF08659_consen   74 QLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG--------  145 (181)
T ss_dssp             TSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT--------
T ss_pred             HHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc--------
Confidence            42     68999999992                    266788999999888899999999976 344332        


Q ss_pred             CCCCCCChhHHHHHH--------HHhCCcEEEEecCee
Q 025587          204 VVKPDAGHVQVEKYI--------SENFSNWASFRPQYM  233 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~--------~e~~~~~~ilRp~~i  233 (250)
                           ...|.+....        ...+.++..|.-+.+
T Consensus       146 -----q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  146 -----QSAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             -----hHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence                 2567644432        233678888776654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.82  E-value=6.1e-08  Score=104.75  Aligned_cols=152  Identities=15%  Similarity=0.131  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCC--ccccCC-----------------C-----------C
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDE--NSDKMK-----------------K-----------P  121 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~--~~~~~~-----------------~-----------~  121 (250)
                      ++++||||    ||+++||..++++|+++ |++|+++.|+..  ....+.                 .           .
T Consensus      1996 ~g~vvLVT----GGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813      1996 SDDVFLVT----GGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence            46799999    99999999999999998 699999999831  000000                 0           0


Q ss_pred             CCCc----------ccchh--cCCceEEeCC---HHHHHhhhcC----CcccEEEeCCC--------------------c
Q 025587          122 PFNR----------FNEIV--SAGGKTVWGD---PAEVGNVVGG----VTFDVVLDNNG--------------------K  162 (250)
Q Consensus       122 ~~~~----------~~~~~--~~~v~~v~~D---~~~l~~~l~~----~~~d~Vi~~ag--------------------~  162 (250)
                      ...+          +..+.  +..+.++.+|   .+.+.+++..    .++|+|||+||                    .
T Consensus      2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence            0000          00111  1234445554   6666665542    25899999999                    3


Q ss_pred             CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh----------CCcEEEEecCe
Q 025587          163 NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQY  232 (250)
Q Consensus       163 ~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~  232 (250)
                      |+.++.++++++.....++||++||...+....+            ...|++.|...+.          +++++.+.||.
T Consensus      2152 nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~g------------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~ 2219 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAENIKLLALFSSAAGFYGNTG------------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGP 2219 (2582)
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCC------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCe
Confidence            6888999999998877789999999754322222            2558877743321          47899999999


Q ss_pred             eecCCCCC
Q 025587          233 MIGSGNNK  240 (250)
Q Consensus       233 i~G~~~~~  240 (250)
                      +-|.+.++
T Consensus      2220 wdtgm~~~ 2227 (2582)
T TIGR02813      2220 WDGGMVNP 2227 (2582)
T ss_pred             ecCCccch
Confidence            88876543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.81  E-value=9e-08  Score=79.52  Aligned_cols=147  Identities=22%  Similarity=0.223  Sum_probs=95.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcC-CCcc-ccCCCCCCCcccchhcCCceEEeCC----------
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVG-DENS-DKMKKPPFNRFNEIVSAGGKTVWGD----------  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~-~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D----------  140 (250)
                      ++.|+||    ||+.+||.-|+++|++. |.++++-+++ ++.. +++..      ....+.+++++..|          
T Consensus         3 pksv~It----GaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~------k~~~d~rvHii~Ldvt~deS~~~~   72 (249)
T KOG1611|consen    3 PKSVFIT----GANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELAL------KSKSDSRVHIIQLDVTCDESIDNF   72 (249)
T ss_pred             CccEEEe----ccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHH------hhccCCceEEEEEecccHHHHHHH
Confidence            3569999    99999999999999986 6777666654 5553 21110      11235567776665          


Q ss_pred             HHHHHhhhcCCcccEEEeCCCc---------------------C----HHhHHHHHHHHHhCCCC-----------EEEE
Q 025587          141 PAEVGNVVGGVTFDVVLDNNGK---------------------N----LDAVRPVADWAKSSGVK-----------QFLF  184 (250)
Q Consensus       141 ~~~l~~~l~~~~~d~Vi~~ag~---------------------~----~~~~~~ll~~~~~~~~~-----------~~v~  184 (250)
                      .+++++++.....|.+|++||+                     |    +..++.++...+++..+           .+|+
T Consensus        73 ~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIin  152 (249)
T KOG1611|consen   73 VQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIIN  152 (249)
T ss_pred             HHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEE
Confidence            3445555444568999999992                     2    33466777777664444           7999


Q ss_pred             EcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       185 iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      +||.+.-  ...      .... ....|.++|.+...            ++-++.|.||.|-..+..
T Consensus       153 isS~~~s--~~~------~~~~-~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg  210 (249)
T KOG1611|consen  153 ISSSAGS--IGG------FRPG-GLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG  210 (249)
T ss_pred             eeccccc--cCC------CCCc-chhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC
Confidence            9986633  111      1111 13678888865544            355889999999776543

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.78  E-value=7.9e-09  Score=87.66  Aligned_cols=130  Identities=17%  Similarity=0.199  Sum_probs=83.9

Q ss_pred             chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhhcC------CcccEE
Q 025587           87 HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVGG------VTFDVV  156 (250)
Q Consensus        87 tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l~~------~~~d~V  156 (250)
                      ++.||++++++|+++|++|++++|+.+..+..       +.++ ...+..++.+|   ++++.++++.      .++|++
T Consensus         5 s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    5 SSGIGRAIARALAEEGANVILTDRNEEKLADA-------LEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             TSHHHHHHHHHHHHTTEEEEEEESSHHHHHHH-------HHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCChHHHHHHHHHHCCCEEEEEeCChHHHHHH-------HHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            49999999999999999999999998653110       0011 11223346666   6666666432      359999


Q ss_pred             EeCCCc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          157 LDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       157 i~~ag~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      ||+++.                        ++.+    ++.+++.+++.  +++|++||.........            
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~------------  143 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPG------------  143 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTT------------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCcc------------
Confidence            999872                        2223    34444444443  67999998764433221            


Q ss_pred             CChhHHHH------------HHHH-hCCcEEEEecCeeecCC
Q 025587          209 AGHVQVEK------------YISE-NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       209 ~~~y~~~k------------~~~e-~~~~~~ilRp~~i~G~~  237 (250)
                      ...|+..|            .+.. .+|+++.|.||.+..+.
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~  185 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM  185 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence            24677666            3444 68999999999998664

...

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.76  E-value=1.2e-07  Score=80.52  Aligned_cols=141  Identities=18%  Similarity=0.169  Sum_probs=86.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhc-CCceE---EeCC-HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVS-AGGKT---VWGD-PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~-~~v~~---v~~D-~~~l~  145 (250)
                      ++++||||    ||++.||++++++|+++|++|+++.|..+..  +......     .... ..+..   +..| .+++.
T Consensus         4 ~~~~ilIT----Gas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dvs~~~~~v~   74 (251)
T COG1028           4 SGKVALVT----GASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAI-----KEAGGGRAAAVAADVSDDEESVE   74 (251)
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHH-----HhcCCCcEEEEEecCCCCHHHHH
Confidence            46899999    9999999999999999999999988876431  1111000     0000 12232   3333 55555


Q ss_pred             hhhcC-----CcccEEEeCCCc---------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCC
Q 025587          146 NVVGG-----VTFDVVLDNNGK---------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      .+++.     ..+|++|++||.                     |+.+...+.+    .+++ .  +||++||.... ...
T Consensus        75 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~--~Iv~isS~~~~-~~~  150 (251)
T COG1028          75 ALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-Q--RIVNISSVAGL-GGP  150 (251)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-C--eEEEECCchhc-CCC
Confidence            55432     248999999993                     3333333333    3332 1  99999998755 322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                      ..           ...|+.+|...            +.+++++.+.||.+-.+.
T Consensus       151 ~~-----------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         151 PG-----------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             CC-----------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence            21           14577666332            236899999999665443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.74  E-value=2.3e-07  Score=81.75  Aligned_cols=37  Identities=24%  Similarity=0.205  Sum_probs=32.3

Q ss_pred             cccCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           71 AAEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        71 ~~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      ..++|++|||    ||.  ..||+++++.|+++|++|++.+|.
T Consensus         5 ~~~gk~alIT----Ga~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          5 DLTGKIAFIA----GIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCCCCEEEEe----CCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            3467899999    985  899999999999999999997654

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.67  E-value=1.7e-07  Score=83.16  Aligned_cols=154  Identities=21%  Similarity=0.179  Sum_probs=97.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~  147 (250)
                      ..+++||.|+    |++|.||..++..|+.++  ++++++++.....+.+      .+.... ....+. ..|+.++.+.
T Consensus         5 ~~~~~KI~Ii----GaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~------Dl~~~~-~~~~v~~~td~~~~~~~   73 (321)
T PTZ00325          5 ALKMFKVAVL----GAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA------DLSHID-TPAKVTGYADGELWEKA   73 (321)
T ss_pred             CCCCCEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc------chhhcC-cCceEEEecCCCchHHH
Confidence            3456799999    999999999999998655  7899999932111111      001101 122222 3355566777


Q ss_pred             hcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCC--CccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~--~~~e~~~~~~~~~~  211 (250)
                      +++  .|+||+++|              .|+..++++++++++++++++|+++|..+.....-.  ...+.....+. ..
T Consensus        74 l~g--aDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~-~v  150 (321)
T PTZ00325         74 LRG--ADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR-KL  150 (321)
T ss_pred             hCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh-he
Confidence            887  699999999              367789999999999999999999996554322110  00111111111 22


Q ss_pred             hHH--------HHHHHH-hCCcEEEEecCeeecCCCC
Q 025587          212 VQV--------EKYISE-NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       212 y~~--------~k~~~e-~~~~~~ilRp~~i~G~~~~  239 (250)
                      |+.        ..++++ .+++..-++ ++|+|.+.+
T Consensus       151 iG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        151 FGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             eechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            332        223333 357777777 899999887

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.65  E-value=5.2e-08  Score=79.36  Aligned_cols=99  Identities=11%  Similarity=0.193  Sum_probs=70.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE---eCCHHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV---WGDPAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v---~~D~~~l~~~l~~-  150 (250)
                      |+++||    ||+|++|. ++++|+++||+|++++|+++..+.+...    +.  ....+..+   ..|.+++.+++++ 
T Consensus         1 m~vlVt----GGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~----l~--~~~~i~~~~~Dv~d~~sv~~~i~~~   69 (177)
T PRK08309          1 MHALVI----GGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRE----ST--TPESITPLPLDYHDDDALKLAIKST   69 (177)
T ss_pred             CEEEEE----CcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHH----hh--cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            579999    99998876 9999999999999999987554432110    00  01133443   3357777766643 


Q ss_pred             ----CcccEEEeCCCcCHHhHHHHHHHHHhCCCC----EEEEEc
Q 025587          151 ----VTFDVVLDNNGKNLDAVRPVADWAKSSGVK----QFLFIS  186 (250)
Q Consensus       151 ----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~----~~v~iS  186 (250)
                          ..+|.+|+..  .+.+..++..+|++.|++    +||++=
T Consensus        70 l~~~g~id~lv~~v--h~~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         70 IEKNGPFDLAVAWI--HSSAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             HHHcCCCeEEEEec--cccchhhHHHHHHHHccCCCCceEEEEe
Confidence                2578888665  456899999999999998    888754

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.59  E-value=4.3e-07  Score=78.12  Aligned_cols=90  Identities=19%  Similarity=0.234  Sum_probs=64.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE--eCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV--WGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v--~~D~~~l~~~l~~~~  152 (250)
                      |+|||+    ||||. |+.|+++|.++||+|++.++++.....+.+.          ....++  ..|.+++.+.++..+
T Consensus         1 m~ILvl----GGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~----------g~~~v~~g~l~~~~l~~~l~~~~   65 (256)
T TIGR00715         1 MTVLLM----GGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH----------QALTVHTGALDPQELREFLKRHS   65 (256)
T ss_pred             CeEEEE----echHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc----------CCceEEECCCCHHHHHHHHHhcC
Confidence            589999    99999 9999999999999999999988655433211          112222  235788989998888


Q ss_pred             ccEEEeCCCcC-HHhHHHHHHHHHhCCC
Q 025587          153 FDVVLDNNGKN-LDAVRPVADWAKSSGV  179 (250)
Q Consensus       153 ~d~Vi~~ag~~-~~~~~~ll~~~~~~~~  179 (250)
                      +|+|||.+... ...+.++.++|++.|+
T Consensus        66 i~~VIDAtHPfA~~is~~a~~a~~~~~i   93 (256)
T TIGR00715        66 IDILVDATHPFAAQITTNATAVCKELGI   93 (256)
T ss_pred             CCEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence            99999998722 3445555555555443

This enzyme was found to be a monomer by gel filtration.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.58  E-value=1.8e-07  Score=84.47  Aligned_cols=95  Identities=21%  Similarity=0.304  Sum_probs=73.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce---EEeCCHHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK---TVWGDPAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~---~v~~D~~~l~~~l~  149 (250)
                      +++|||+    |+ |+||+.++..|+++| ++|++.+|+.++..++....        ..+++   ++..|.+.+.++++
T Consensus         1 m~~ilvi----Ga-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--------~~~v~~~~vD~~d~~al~~li~   67 (389)
T COG1748           1 MMKILVI----GA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--------GGKVEALQVDAADVDALVALIK   67 (389)
T ss_pred             CCcEEEE----CC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--------cccceeEEecccChHHHHHHHh
Confidence            4789999    77 999999999999999 99999999987776553321        11344   44445889999999


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      +  .|+||+++...+..  .++++|.+.|+ ++|=+|
T Consensus        68 ~--~d~VIn~~p~~~~~--~i~ka~i~~gv-~yvDts   99 (389)
T COG1748          68 D--FDLVINAAPPFVDL--TILKACIKTGV-DYVDTS   99 (389)
T ss_pred             c--CCEEEEeCCchhhH--HHHHHHHHhCC-CEEEcc
Confidence            8  49999999855433  88899999887 666544

>PRK06720 hypothetical protein; Provisional

Probab=98.52  E-value=4.9e-07  Score=73.10  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=54.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++.++||    ||+++||+.+++.|+++|++|++++|+.+..+...+.    +. ........+..|   .+++.++++
T Consensus        15 ~gk~~lVT----Ga~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~v~   85 (169)
T PRK06720         15 AGKVAIVT----GGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEE----IT-NLGGEALFVSYDMEKQGDWQRVIS   85 (169)
T ss_pred             CCCEEEEe----cCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999876543221110    00 001123334444   566655442


Q ss_pred             ----C-CcccEEEeCCC
Q 025587          150 ----G-VTFDVVLDNNG  161 (250)
Q Consensus       150 ----~-~~~d~Vi~~ag  161 (250)
                          . .++|++||+||
T Consensus        86 ~~~~~~G~iDilVnnAG  102 (169)
T PRK06720         86 ITLNAFSRIDMLFQNAG  102 (169)
T ss_pred             HHHHHcCCCCEEEECCC
Confidence                1 25899999999

>PRK09620 hypothetical protein; Provisional

Probab=98.42  E-value=1.3e-06  Score=74.01  Aligned_cols=77  Identities=22%  Similarity=0.225  Sum_probs=52.2

Q ss_pred             cCcEEEEEecCCCcc----------------hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE
Q 025587           73 EKKKVLIVNTNSGGH----------------AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt----------------G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~  136 (250)
                      .+|+||||    +|.                ||+|++|+++|+++|++|+++++.......  ..     .  .......
T Consensus         2 ~gk~vlIT----aG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~~-----~--~~~~~~~   68 (229)
T PRK09620          2 KGKKVLIT----SGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN--DI-----N--NQLELHP   68 (229)
T ss_pred             CCCEEEEe----CCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--cc-----C--CceeEEE
Confidence            36899999    775                999999999999999999999864321110  00     0  0112223


Q ss_pred             EeCC---HHHHHhhhcCCcccEEEeCCCc
Q 025587          137 VWGD---PAEVGNVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       137 v~~D---~~~l~~~l~~~~~d~Vi~~ag~  162 (250)
                      +.++   .+.+.+++...++|+|||+|++
T Consensus        69 V~s~~d~~~~l~~~~~~~~~D~VIH~AAv   97 (229)
T PRK09620         69 FEGIIDLQDKMKSIITHEKVDAVIMAAAG   97 (229)
T ss_pred             EecHHHHHHHHHHHhcccCCCEEEECccc
Confidence            4442   4566777765568999999993

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.31  E-value=3e-06  Score=71.82  Aligned_cols=64  Identities=19%  Similarity=0.227  Sum_probs=43.6

Q ss_pred             CcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-----HHHHHhhhcCCcccEEEeC
Q 025587           85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVVGGVTFDVVLDN  159 (250)
Q Consensus        85 GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-----~~~l~~~l~~~~~d~Vi~~  159 (250)
                      .++|++|++|+++|+++||+|++++|...... .           ...+++++..+     .+.+.+.+.+  +|+|||+
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~-----------~~~~v~~i~v~s~~~m~~~l~~~~~~--~DivIh~   88 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E-----------PHPNLSIIEIENVDDLLETLEPLVKD--HDVLIHS   88 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccC-C-----------CCCCeEEEEEecHHHHHHHHHHHhcC--CCEEEeC
Confidence            46899999999999999999999987642111 0           01133433333     2445555554  7999999


Q ss_pred             CCc
Q 025587          160 NGK  162 (250)
Q Consensus       160 ag~  162 (250)
                      ||+
T Consensus        89 AAv   91 (229)
T PRK06732         89 MAV   91 (229)
T ss_pred             Ccc
Confidence            994

>PLN00106 malate dehydrogenase

Probab=98.26  E-value=1.1e-05  Score=71.70  Aligned_cols=100  Identities=16%  Similarity=0.178  Sum_probs=73.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcC--CceEEe-CCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVW-GDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~--~v~~v~-~D~~~l~~~l  148 (250)
                      .+||.|+    |++|.||..++..|+.++  .+++++++.+.....+         ++...  ...+.. .+.+++.+.+
T Consensus        18 ~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~---------Dl~~~~~~~~i~~~~~~~d~~~~l   84 (323)
T PLN00106         18 GFKVAVL----GAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA---------DVSHINTPAQVRGFLGDDQLGDAL   84 (323)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc---------hhhhCCcCceEEEEeCCCCHHHHc
Confidence            4699999    999999999999998766  5899999876111111         11111  112211 2455677888


Q ss_pred             cCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ++  .|+||++||              .|...++++++.+++++.+.+|+++|-
T Consensus        85 ~~--aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN  136 (323)
T PLN00106         85 KG--ADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN  136 (323)
T ss_pred             CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            88  699999999              368889999999999999999998883

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.23  E-value=1.3e-06  Score=69.94  Aligned_cols=141  Identities=13%  Similarity=0.149  Sum_probs=89.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +.-..|||    ||...+|+..+++|.+.|..|.+++-..++-....++        ...++.+...|   ++++..++.
T Consensus         8 kglvalvt----ggasglg~ataerlakqgasv~lldlp~skg~~vake--------lg~~~vf~padvtsekdv~aala   75 (260)
T KOG1199|consen    8 KGLVALVT----GGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE--------LGGKVVFTPADVTSEKDVRAALA   75 (260)
T ss_pred             cCeeEEee----cCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH--------hCCceEEeccccCcHHHHHHHHH
Confidence            34567999    9999999999999999999999999776543322221        23334444555   677777764


Q ss_pred             C-----CcccEEEeCCC--------------------------cCHHhHHHHHHHHHh--------CCCC--EEEEEcCc
Q 025587          150 G-----VTFDVVLDNNG--------------------------KNLDAVRPVADWAKS--------SGVK--QFLFISSA  188 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------------~~~~~~~~ll~~~~~--------~~~~--~~v~iSS~  188 (250)
                      .     .+.|+.++|||                          +|+.++.|++..-..        .+-+  .+|..-|.
T Consensus        76 ~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasv  155 (260)
T KOG1199|consen   76 KAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASV  155 (260)
T ss_pred             HHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeecee
Confidence            3     26899999999                          244555555544221        1122  24555554


Q ss_pred             ccccCCCCCCccCCCCCCCCCChhHHHH------------HHHHhCCcEEEEecCeeecCC
Q 025587          189 GIYKPADEPPHVEGDVVKPDAGHVQVEK------------YISENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~~y~~~k------------~~~e~~~~~~ilRp~~i~G~~  237 (250)
                      ..|....+            ...|.++|            -++-.|++++.|-||.+-.|.
T Consensus       156 aafdgq~g------------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpl  204 (260)
T KOG1199|consen  156 AAFDGQTG------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPL  204 (260)
T ss_pred             eeecCccc------------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChh
Confidence            44433222            14466555            223347999999999876664

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.19  E-value=4.3e-06  Score=76.07  Aligned_cols=93  Identities=26%  Similarity=0.428  Sum_probs=66.4

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCC-C-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCC
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSG-H-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G-~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~  151 (250)
                      |+|+    || |++|+.+++.|++++ + +|++.+|+.++.+.+.+.       +....++.+..   |.+++.+++++ 
T Consensus         1 Ilvl----G~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~l~~~~~~-   67 (386)
T PF03435_consen    1 ILVL----GA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK-------LLGDRVEAVQVDVNDPESLAELLRG-   67 (386)
T ss_dssp             EEEE-------SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHTT-
T ss_pred             CEEE----cC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh-------ccccceeEEEEecCCHHHHHHHHhc-
Confidence            7899    99 999999999999997 5 899999998776544321       12234444444   47789999988 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                       .|+|||+++..  ....++++|.+.|+ ++|-.|
T Consensus        68 -~dvVin~~gp~--~~~~v~~~~i~~g~-~yvD~~   98 (386)
T PF03435_consen   68 -CDVVINCAGPF--FGEPVARACIEAGV-HYVDTS   98 (386)
T ss_dssp             -SSEEEE-SSGG--GHHHHHHHHHHHT--EEEESS
T ss_pred             -CCEEEECCccc--hhHHHHHHHHHhCC-Ceeccc
Confidence             59999999865  66688888888887 677633

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.19  E-value=1.7e-05  Score=70.75  Aligned_cols=102  Identities=9%  Similarity=0.137  Sum_probs=63.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-------CeEEEEEcCCCccccCCCCCCCcccch---hcCCceEEeCCHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGDPAE  143 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~~  143 (250)
                      +.+|+||    ||+|++|.+++..|+..+       .+|+++++.+.. +....... .+.+.   ...++.    +..+
T Consensus         2 ~~kV~I~----GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~~-Dl~d~~~~~~~~~~----~~~~   71 (325)
T cd01336           2 PIRVLVT----GAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVVM-ELQDCAFPLLKSVV----ATTD   71 (325)
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccceee-ehhhccccccCCce----ecCC
Confidence            4589999    999999999999999854       589999996531 11111100 00100   011221    1345


Q ss_pred             HHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC--CCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG--VKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~--~~~~v~iSS  187 (250)
                      +.+.+++  +|+|||+||              .|+...+.+.+.++++.  -..+|.+|.
T Consensus        72 ~~~~l~~--aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          72 PEEAFKD--VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HHHHhCC--CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            5666676  799999999              35666777777777763  334555553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.11  E-value=2e-05  Score=69.91  Aligned_cols=99  Identities=21%  Similarity=0.263  Sum_probs=69.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHh---CCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeC-CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWG-DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~-D~~~l~~~l~  149 (250)
                      |+|+|+    ||+|.+|++++..|..   .++++++++|++. .....      + ++.. .....+.+ +.+++.+.++
T Consensus         1 ~KI~II----GAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~a------l-Dl~~~~~~~~i~~~~~~d~~~~l~   68 (312)
T PRK05086          1 MKVAVL----GAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVA------V-DLSHIPTAVKIKGFSGEDPTPALE   68 (312)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Cccee------h-hhhcCCCCceEEEeCCCCHHHHcC
Confidence            689999    9999999999988854   3578999998753 21100      0 1111 11122222 3445556666


Q ss_pred             CCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +  .|+||.++|.              |...++.+++.+++++.+++|.+.|
T Consensus        69 ~--~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         69 G--ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            6  7999999993              5668899999999999999998887

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.03  E-value=2.9e-05  Score=65.63  Aligned_cols=97  Identities=21%  Similarity=0.291  Sum_probs=71.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~~  150 (250)
                      |+++|.     |.|.+|..+++.|.++||+|++++++++........         ..+...+.+|   ++.|.++ +. 
T Consensus         1 m~iiIi-----G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---------~~~~~~v~gd~t~~~~L~~agi~-   65 (225)
T COG0569           1 MKIIII-----GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---------ELDTHVVIGDATDEDVLEEAGID-   65 (225)
T ss_pred             CEEEEE-----CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---------hcceEEEEecCCCHHHHHhcCCC-
Confidence            578999     579999999999999999999999998765532111         1345666666   6677766 33 


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .+|+++-..+.+.....-..-++++.|++++|---.
T Consensus        66 -~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~  101 (225)
T COG0569          66 -DADAVVAATGNDEVNSVLALLALKEFGVPRVIARAR  101 (225)
T ss_pred             -cCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEec
Confidence             489999999887766666666666678887765433

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.01  E-value=1.9e-05  Score=65.86  Aligned_cols=145  Identities=18%  Similarity=0.157  Sum_probs=88.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCC------HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD------PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D------~~~l  144 (250)
                      +.+.+|||    |++-.||..+++.+.+++-++....+..  ...+.+        .......-....+|      .+++
T Consensus         5 ~r~villT----GaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L--------~v~~gd~~v~~~g~~~e~~~l~al   72 (253)
T KOG1204|consen    5 MRKVILLT----GASRGIGTGSVATILAEDDEALRYGVARLLAELEGL--------KVAYGDDFVHVVGDITEEQLLGAL   72 (253)
T ss_pred             cceEEEEe----cCCCCccHHHHHHHHhcchHHHHHhhhcccccccce--------EEEecCCcceechHHHHHHHHHHH
Confidence            56788999    9999999999999999987655544433  222211        11111111123333      1233


Q ss_pred             Hhhhc--CCcccEEEeCCC-----------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCC
Q 025587          145 GNVVG--GVTFDVVLDNNG-----------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPA  194 (250)
Q Consensus       145 ~~~l~--~~~~d~Vi~~ag-----------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~  194 (250)
                      .++..  +.+-|.||||||                       .|+.....+.+++    ++.. .+-+|++||...-.+-
T Consensus        73 ~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~  152 (253)
T KOG1204|consen   73 REAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF  152 (253)
T ss_pred             HhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc
Confidence            33322  236899999999                       2333444444444    3332 3679999997644332


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      ..            +..|+..|.+.++           ++++..++||.|-..++...
T Consensus       153 ~~------------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~i  198 (253)
T KOG1204|consen  153 SS------------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCI  198 (253)
T ss_pred             cH------------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHH
Confidence            22            3789999977665           46788999999987765443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.89  E-value=2.6e-05  Score=66.14  Aligned_cols=84  Identities=18%  Similarity=0.200  Sum_probs=52.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-----EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-----VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-----V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      +.|.+|||    |++..+|.+|+++|++..-+     +++..|+.++.+.....-..-+. -...+++++..|...+..+
T Consensus         2 ~RKvalIT----GanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p-~~~i~~~yvlvD~sNm~Sv   76 (341)
T KOG1478|consen    2 MRKVALIT----GANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHP-KSTIEVTYVLVDVSNMQSV   76 (341)
T ss_pred             CceEEEEe----cCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCC-CceeEEEEEEEehhhHHHH
Confidence            45778999    99999999999999987533     55556887766654321000000 0133566777773333333


Q ss_pred             hc---C-----CcccEEEeCCC
Q 025587          148 VG---G-----VTFDVVLDNNG  161 (250)
Q Consensus       148 l~---~-----~~~d~Vi~~ag  161 (250)
                      +.   +     .+.|.|+-+||
T Consensus        77 ~~A~~di~~rf~~ld~iylNAg   98 (341)
T KOG1478|consen   77 FRASKDIKQRFQRLDYIYLNAG   98 (341)
T ss_pred             HHHHHHHHHHhhhccEEEEccc
Confidence            21   1     24899999998

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.84  E-value=2.5e-05  Score=64.31  Aligned_cols=80  Identities=21%  Similarity=0.267  Sum_probs=55.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~~~  151 (250)
                      ..++++|+    ||+|.+|+.+++.|++.|++|+++.|+.++.+.+.+.    +.......+. ....|.+++.+++++ 
T Consensus        27 ~~~~vlVl----GgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~-   97 (194)
T cd01078          27 KGKTAVVL----GGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADS----LRARFGEGVGAVETSDDAARAAAIKG-   97 (194)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHhhcCCcEEEeeCCCHHHHHHHHhc-
Confidence            45899999    9999999999999999999999999987654433211    0000011122 223457777888876 


Q ss_pred             cccEEEeCCCc
Q 025587          152 TFDVVLDNNGK  162 (250)
Q Consensus       152 ~~d~Vi~~ag~  162 (250)
                       .|+||++...
T Consensus        98 -~diVi~at~~  107 (194)
T cd01078          98 -ADVVFAAGAA  107 (194)
T ss_pred             -CCEEEECCCC
Confidence             6999998764

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.82  E-value=2.6e-05  Score=69.60  Aligned_cols=71  Identities=18%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhC-C-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-G-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      -.+++|+||    ||+|+||+.++++|+++ | .+++++.|+.+....+.+.              +..++..++.+++.
T Consensus       153 l~~k~VLVt----GAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e--------------l~~~~i~~l~~~l~  214 (340)
T PRK14982        153 LSKATVAVV----GATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE--------------LGGGKILSLEEALP  214 (340)
T ss_pred             cCCCEEEEE----ccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH--------------hccccHHhHHHHHc
Confidence            346899999    99999999999999865 5 6899999986555433211              11234445777777


Q ss_pred             CCcccEEEeCCCc
Q 025587          150 GVTFDVVLDNNGK  162 (250)
Q Consensus       150 ~~~~d~Vi~~ag~  162 (250)
                      +  .|+|||+++.
T Consensus       215 ~--aDiVv~~ts~  225 (340)
T PRK14982        215 E--ADIVVWVASM  225 (340)
T ss_pred             c--CCEEEECCcC
Confidence            6  7999999984

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.79  E-value=2.4e-05  Score=68.68  Aligned_cols=77  Identities=18%  Similarity=0.274  Sum_probs=58.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~  151 (250)
                      +...++|-    ||+||.|..++++|+.+|.+-.+..|+..+++.+...        .+.+.... .++++.+++.... 
T Consensus         5 ~e~d~iiY----GAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~--------LG~~~~~~p~~~p~~~~~~~~~-   71 (382)
T COG3268           5 REYDIIIY----GATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRAS--------LGPEAAVFPLGVPAALEAMASR-   71 (382)
T ss_pred             cceeEEEE----ccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHh--------cCccccccCCCCHHHHHHHHhc-
Confidence            45679999    9999999999999999999998888988766643211        22233322 2348888888887 


Q ss_pred             cccEEEeCCCcC
Q 025587          152 TFDVVLDNNGKN  163 (250)
Q Consensus       152 ~~d~Vi~~ag~~  163 (250)
                       .++|+||+|.+
T Consensus        72 -~~VVlncvGPy   82 (382)
T COG3268          72 -TQVVLNCVGPY   82 (382)
T ss_pred             -ceEEEeccccc
Confidence             69999999943

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.78  E-value=9.1e-05  Score=67.79  Aligned_cols=72  Identities=25%  Similarity=0.301  Sum_probs=52.0

Q ss_pred             cCcEEEEEecCCCc----------------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-
Q 025587           73 EKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-  135 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-  135 (250)
                      .+++||||    ||                +|.+|.+++++|.++|++|++++++.+ ..    .+         .++. 
T Consensus       187 ~gk~vlIT----gG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~----~~---------~~~~~  248 (399)
T PRK05579        187 AGKRVLIT----AGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP----TP---------AGVKR  248 (399)
T ss_pred             CCCEEEEe----CCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc----CC---------CCcEE
Confidence            56899999    99                899999999999999999999988652 11    00         1122 


Q ss_pred             EEeCCHHHHHhhhcC--CcccEEEeCCCc
Q 025587          136 TVWGDPAEVGNVVGG--VTFDVVLDNNGK  162 (250)
Q Consensus       136 ~v~~D~~~l~~~l~~--~~~d~Vi~~ag~  162 (250)
                      +...|.+++.+.+..  ..+|++|++||+
T Consensus       249 ~dv~~~~~~~~~v~~~~~~~DilI~~Aav  277 (399)
T PRK05579        249 IDVESAQEMLDAVLAALPQADIFIMAAAV  277 (399)
T ss_pred             EccCCHHHHHHHHHHhcCCCCEEEEcccc
Confidence            233356666655542  248999999993

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.78  E-value=0.00032  Score=62.89  Aligned_cols=112  Identities=22%  Similarity=0.397  Sum_probs=73.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc--------------h--hcCCce
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------I--VSAGGK  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------~--~~~~v~  135 (250)
                      +..+|+|+    | .|.+|..+++.|...|. ++++++.+.-...++..+.+....+              +  ..+.++
T Consensus        23 ~~~~VlVv----G-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~   97 (339)
T PRK07688         23 REKHVLII----G-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVR   97 (339)
T ss_pred             cCCcEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcE
Confidence            45789999    5 59999999999999996 8999998653333332221111110              0  122333


Q ss_pred             --EEeCC--HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          136 --TVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       136 --~v~~D--~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                        .+..+  .+++.+++.+  +|+||++.. |...-..+-++|.+.++ .+|+.+..+.||.
T Consensus        98 v~~~~~~~~~~~~~~~~~~--~DlVid~~D-n~~~r~~ln~~~~~~~i-P~i~~~~~g~~G~  155 (339)
T PRK07688         98 VEAIVQDVTAEELEELVTG--VDLIIDATD-NFETRFIVNDAAQKYGI-PWIYGACVGSYGL  155 (339)
T ss_pred             EEEEeccCCHHHHHHHHcC--CCEEEEcCC-CHHHHHHHHHHHHHhCC-CEEEEeeeeeeeE
Confidence              33333  6677777877  699999976 55555566788888776 5788777666553

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.75  E-value=0.0004  Score=62.25  Aligned_cols=111  Identities=21%  Similarity=0.331  Sum_probs=71.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc----------------hhcCC--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE----------------IVSAG--  133 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~----------------~~~~~--  133 (250)
                      +.++|+|+    | .|.+|.++++.|+..|. ++++++++.-...++..+.+....+                ...++  
T Consensus        23 ~~~~VlIi----G-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~   97 (338)
T PRK12475         23 REKHVLIV----G-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE   97 (338)
T ss_pred             cCCcEEEE----C-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE
Confidence            45789999    6 68899999999999996 7888988753333332221111100                01223  


Q ss_pred             ceEEeCC--HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          134 GKTVWGD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       134 v~~v~~D--~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      ++.+..|  .+.+.+++.+  +|+||++.. +...-..+-++|.+.++ .+|+.+..+.+|
T Consensus        98 i~~~~~~~~~~~~~~~~~~--~DlVid~~D-~~~~r~~in~~~~~~~i-p~i~~~~~g~~G  154 (338)
T PRK12475         98 IVPVVTDVTVEELEELVKE--VDLIIDATD-NFDTRLLINDLSQKYNI-PWIYGGCVGSYG  154 (338)
T ss_pred             EEEEeccCCHHHHHHHhcC--CCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence            3344433  5677888877  799999985 44444445577888776 577777666555

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.75  E-value=1.9e-05  Score=69.78  Aligned_cols=93  Identities=14%  Similarity=0.218  Sum_probs=63.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHh----CCCeEEEEEcCCCccccCC----CCCCCcccchhcCCceEEeC---CHHH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLG----SGHEVTIMTVGDENSDKMK----KPPFNRFNEIVSAGGKTVWG---DPAE  143 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~----~G~~V~~l~R~~~~~~~~~----~~~~~~~~~~~~~~v~~v~~---D~~~  143 (250)
                      -.++|.    ||+||.|.++++++++    +|...-+..|++++++...    +..-..++    ..+ ++.+   |+++
T Consensus         6 yDvVIy----GASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls----~~~-i~i~D~~n~~S   76 (423)
T KOG2733|consen    6 YDVVIY----GASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLS----SSV-ILIADSANEAS   76 (423)
T ss_pred             eeEEEE----ccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcc----cce-EEEecCCCHHH
Confidence            368999    9999999999999999    7888888999987665431    11101111    112 4444   4999


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSG  178 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~  178 (250)
                      +.+..+.  ..+|+||+|..-..-.+++.+|.+.|
T Consensus        77 l~emak~--~~vivN~vGPyR~hGE~VVkacienG  109 (423)
T KOG2733|consen   77 LDEMAKQ--ARVIVNCVGPYRFHGEPVVKACIENG  109 (423)
T ss_pred             HHHHHhh--hEEEEeccccceecCcHHHHHHHHcC
Confidence            9999887  68999999954444444455554444

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.74  E-value=8.9e-05  Score=59.40  Aligned_cols=104  Identities=20%  Similarity=0.259  Sum_probs=67.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCccc---ch-hcCCceE-EeCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EI-VSAGGKT-VWGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~---~~-~~~~v~~-v~~D~~~l~~~l  148 (250)
                      +++|-++     |.|-+|+.+++.|++.||+|++.+|++++.+.+.+.......   ++ ...++.+ ...|.+.+++++
T Consensus         1 m~~Ig~I-----GlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    1 MMKIGFI-----GLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             -BEEEEE-------SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred             CCEEEEE-----chHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhh
Confidence            4789999     579999999999999999999999997666554332221111   11 1223332 234555565554


Q ss_pred             cC-------CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 GG-------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 ~~-------~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .+       .+-+++|++........+.+.+.+.+.|+ +||
T Consensus        76 ~~~~i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~v  116 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMSTISPETSRELAERLAAKGV-RYV  116 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTE-EEE
T ss_pred             hhhHHhhccccceEEEecCCcchhhhhhhhhhhhhccc-eee
Confidence            43       23468899999999999999999988775 454

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.70  E-value=0.00019  Score=54.90  Aligned_cols=93  Identities=24%  Similarity=0.284  Sum_probs=58.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|.|.    |.+|.+|+.+++.+.+ .|+++... +|+.+....   .....+......++.+    .+++++++..  
T Consensus         1 mrV~i~----G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g---~d~g~~~~~~~~~~~v----~~~l~~~~~~--   67 (124)
T PF01113_consen    1 MRVGIV----GASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG---KDVGELAGIGPLGVPV----TDDLEELLEE--   67 (124)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT---SBCHHHCTSST-SSBE----BS-HHHHTTH--
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc---chhhhhhCcCCccccc----chhHHHhccc--
Confidence            589999    9999999999999999 68886665 454422111   1011111111112221    2456666665  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +|+||++.  +...+...++.+.++|+ .+|
T Consensus        68 ~DVvIDfT--~p~~~~~~~~~~~~~g~-~~V   95 (124)
T PF01113_consen   68 ADVVIDFT--NPDAVYDNLEYALKHGV-PLV   95 (124)
T ss_dssp             -SEEEEES---HHHHHHHHHHHHHHT--EEE
T ss_pred             CCEEEEcC--ChHHhHHHHHHHHhCCC-CEE
Confidence            79999998  78889899999999876 444

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=97.70  E-value=8e-05  Score=62.27  Aligned_cols=142  Identities=14%  Similarity=0.153  Sum_probs=90.7

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHH-----HHHhCC----CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAK-----ELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP  141 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~-----~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~  141 (250)
                      +.+.++.++-    +++|+|++.|.-     ++-+.+    |+|++++|.+.+.+.       .|+++...++..     
T Consensus         9 ~~~sr~a~~~----~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ri-------tw~el~~~Gip~-----   72 (315)
T KOG3019|consen    9 SGKSRDAVSN----WSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARI-------TWPELDFPGIPI-----   72 (315)
T ss_pred             CCccccCCCC----ccccchhccccCcccccccCCCCcccccceEEEecCCCCccc-------ccchhcCCCCce-----
Confidence            3445667777    999999988776     444444    999999999855441       122232223221     


Q ss_pred             HHHHhhhcCCcccEEEeCCC--------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCCCCc
Q 025587          142 AEVGNVVGGVTFDVVLDNNG--------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~~  199 (250)
                                .+|++++.+|                    ..+..+..++++..++.  .+.+|+++...+|.+.+...+
T Consensus        73 ----------sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY  142 (315)
T KOG3019|consen   73 ----------SCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEY  142 (315)
T ss_pred             ----------ehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccc
Confidence                      1222222222                    23456888999998854  567999999999999887778


Q ss_pred             cCCCCCCCCCChh-----HHHHHHH--HhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHV-----QVEKYIS--ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y-----~~~k~~~--e~~~~~~ilRp~~i~G~~~~  239 (250)
                      +|+++.... +..     ..|..+.  ....+.+++|.|.|.|.+..
T Consensus       143 ~e~~~~qgf-d~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGG  188 (315)
T KOG3019|consen  143 SEKIVHQGF-DILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGG  188 (315)
T ss_pred             ccccccCCh-HHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCc
Confidence            887765432 111     1222211  12488999999999999754

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.58  E-value=0.00044  Score=62.97  Aligned_cols=104  Identities=15%  Similarity=0.199  Sum_probs=66.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~~  150 (250)
                      ++++|.|+    ||||++|..+++.|+++ +++|+.+.+..+.-+.+...    +..+...+.. +...+.++    +++
T Consensus        37 ~~~kVaIv----GATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~~~~~~~~~~----~~~  104 (381)
T PLN02968         37 EKKRIFVL----GASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLPNLVAVKDAD----FSD  104 (381)
T ss_pred             cccEEEEE----CCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCccccceecCCHHH----hcC
Confidence            56799999    99999999999999998 68999998865332221111    0011111111 11112221    344


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                        +|+||-+.+.  .....++..+. .| .++|-+|+..-+.+.
T Consensus       105 --~DvVf~Alp~--~~s~~i~~~~~-~g-~~VIDlSs~fRl~~~  142 (381)
T PLN02968        105 --VDAVFCCLPH--GTTQEIIKALP-KD-LKIVDLSADFRLRDI  142 (381)
T ss_pred             --CCEEEEcCCH--HHHHHHHHHHh-CC-CEEEEcCchhccCCc
Confidence              7999998874  46777777764 45 589999998766553

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.58  E-value=0.00067  Score=60.75  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=60.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCe---EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|+|+    ||+|++|+.|++.|.++||.   ++.+.+..+.-+.+.         +.  +......|.+..  .+.+
T Consensus         1 ~~~V~Iv----GAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~---------~~--g~~i~v~d~~~~--~~~~   63 (334)
T PRK14874          1 GYNVAVV----GATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS---------FK--GKELKVEDLTTF--DFSG   63 (334)
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee---------eC--CceeEEeeCCHH--HHcC
Confidence            3689999    99999999999999998875   477777653332221         11  123333343221  2344


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                        +|+||.+.|..  ..+.+++.+.+.|. .+|=+|+.
T Consensus        64 --vDvVf~A~g~g--~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         64 --VDIALFSAGGS--VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             --CCEEEECCChH--HHHHHHHHHHhCCC-EEEECCch
Confidence              79999998743  45566666666676 56666664

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.55  E-value=0.0017  Score=50.12  Aligned_cols=110  Identities=20%  Similarity=0.342  Sum_probs=71.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--E
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--T  136 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--~  136 (250)
                      .++|+|.     |.|.+|..+++.|...|. +++++|...=..+++..+.+....+              ...+.++  .
T Consensus         2 ~~~v~ii-----G~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~   76 (135)
T PF00899_consen    2 NKRVLII-----GAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEA   76 (135)
T ss_dssp             T-EEEEE-----STSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEE
T ss_pred             CCEEEEE-----CcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeee
Confidence            4789999     579999999999999996 7999987653333433332211111              1223333  3


Q ss_pred             EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          137 VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       137 v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      +..  +.+.+.+.+++  +|+||++... ......+.+.|++.+. .+|+.+..+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~--~d~vi~~~d~-~~~~~~l~~~~~~~~~-p~i~~~~~g~~G  130 (135)
T PF00899_consen   77 IPEKIDEENIEELLKD--YDIVIDCVDS-LAARLLLNEICREYGI-PFIDAGVNGFYG  130 (135)
T ss_dssp             EESHCSHHHHHHHHHT--SSEEEEESSS-HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred             eecccccccccccccC--CCEEEEecCC-HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence            333  25777888866  7999998653 5666677788888876 788887766554

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.53  E-value=0.00012  Score=64.74  Aligned_cols=106  Identities=19%  Similarity=0.214  Sum_probs=66.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcC-------------CceEEeCCH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA-------------GGKTVWGDP  141 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-------------~v~~v~~D~  141 (250)
                      ++|.|+    | .|.+|..++..|+++||+|++++|+++..+.........+..+...             +++ ...| 
T Consensus         3 ~~V~VI----G-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~-~~~~-   75 (308)
T PRK06129          3 GSVAII----G-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIR-VTDS-   75 (308)
T ss_pred             cEEEEE----C-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeE-EECc-
Confidence            589999    6 8999999999999999999999998754432110000000000001             111 2223 


Q ss_pred             HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                        +.+++++  .|+|+.+...+......++..+.+...+..|+.|+...+
T Consensus        76 --~~~a~~~--ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~  121 (308)
T PRK06129         76 --LADAVAD--ADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL  121 (308)
T ss_pred             --HHHhhCC--CCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence              4445555  699999988776666777766655444456666776544

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.53  E-value=0.0011  Score=55.99  Aligned_cols=111  Identities=16%  Similarity=0.243  Sum_probs=69.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--  135 (250)
                      +..+|+|+     |.|.+|.++++.|...| .+++++|.+.=...++..+.+....+              ...+.++  
T Consensus        20 ~~~~Vliv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~   94 (228)
T cd00757          20 KNARVLVV-----GAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIE   94 (228)
T ss_pred             hCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            45799999     48999999999999999 47888876542222232221111000              0112233  


Q ss_pred             EEeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       136 ~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+..  +.+++.+.+.+  +|+||.+.. +...-..+-++|.+.++ .+|+.+..+.+|
T Consensus        95 ~~~~~i~~~~~~~~~~~--~DvVi~~~d-~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g  149 (228)
T cd00757          95 AYNERLDAENAEELIAG--YDLVLDCTD-NFATRYLINDACVKLGK-PLVSGAVLGFEG  149 (228)
T ss_pred             EecceeCHHHHHHHHhC--CCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence            2222  25667777776  799999977 45555667778888775 677776655444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.51  E-value=0.00037  Score=64.62  Aligned_cols=74  Identities=30%  Similarity=0.413  Sum_probs=51.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ++|+|+|+    |+.+ +|..+++.|+++||+|++.++.. +....       ...++...+++++.+|..+  +.+.+ 
T Consensus         4 ~~k~v~ii----G~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~--~~~~~-   68 (450)
T PRK14106          4 KGKKVLVV----GAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKE-------ALEELGELGIELVLGEYPE--EFLEG-   68 (450)
T ss_pred             CCCEEEEE----CCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHH-------HHHHHHhcCCEEEeCCcch--hHhhc-
Confidence            35899999    8777 99999999999999999999875 22111       0112333466677777333  22333 


Q ss_pred             cccEEEeCCCc
Q 025587          152 TFDVVLDNNGK  162 (250)
Q Consensus       152 ~~d~Vi~~ag~  162 (250)
                       +|+||.++|.
T Consensus        69 -~d~vv~~~g~   78 (450)
T PRK14106         69 -VDLVVVSPGV   78 (450)
T ss_pred             -CCEEEECCCC
Confidence             7999999984

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.50  E-value=0.00057  Score=56.04  Aligned_cols=59  Identities=20%  Similarity=0.239  Sum_probs=38.1

Q ss_pred             chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-----HHHHHhhhcCCcccEEEeCCC
Q 025587           87 HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----PAEVGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus        87 tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-----~~~l~~~l~~~~~d~Vi~~ag  161 (250)
                      +|.+|.+|++++..+|++|+++..... .+             ...+++.+..+     .+.+.+.+..  .|++|++|+
T Consensus        28 SG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-------------~p~~~~~i~v~sa~em~~~~~~~~~~--~Di~I~aAA   91 (185)
T PF04127_consen   28 SGKMGAALAEEAARRGAEVTLIHGPSS-LP-------------PPPGVKVIRVESAEEMLEAVKELLPS--ADIIIMAAA   91 (185)
T ss_dssp             -SHHHHHHHHHHHHTT-EEEEEE-TTS------------------TTEEEEE-SSHHHHHHHHHHHGGG--GSEEEE-SB
T ss_pred             cCHHHHHHHHHHHHCCCEEEEEecCcc-cc-------------ccccceEEEecchhhhhhhhccccCc--ceeEEEecc
Confidence            799999999999999999999988741 11             12356666555     3444444444  599999998

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.49  E-value=0.00015  Score=65.58  Aligned_cols=84  Identities=20%  Similarity=0.285  Sum_probs=51.6

Q ss_pred             cCcEEEEEecCCCcchhhHHH--HHHHHHhCCCeEEEEEcCCCcccc-CCCCCCCc---ccc-hh--cCCceEEeCC---
Q 025587           73 EKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGDENSDK-MKKPPFNR---FNE-IV--SAGGKTVWGD---  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~G~~V~~l~R~~~~~~~-~~~~~~~~---~~~-~~--~~~v~~v~~D---  140 (250)
                      .+|++|||    ||++.+|.+  +++.| +.|++|+++++..+..+. .....+..   +.. ..  ...+..+.+|   
T Consensus        40 ggK~aLVT----GaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss  114 (398)
T PRK13656         40 GPKKVLVI----GASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS  114 (398)
T ss_pred             CCCEEEEE----CCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence            35899999    999999999  89999 999999999864322110 00000000   010 11  1223455566   


Q ss_pred             HHHHHhhhcC-----CcccEEEeCCC
Q 025587          141 PAEVGNVVGG-----VTFDVVLDNNG  161 (250)
Q Consensus       141 ~~~l~~~l~~-----~~~d~Vi~~ag  161 (250)
                      .+.+.++++.     .++|+|||+++
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA  140 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLA  140 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCc
Confidence            5555555432     25999999998

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.45  E-value=0.0012  Score=58.77  Aligned_cols=150  Identities=8%  Similarity=0.011  Sum_probs=84.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l  144 (250)
                      +++|.|+    |++|.+|..++..|+..|.       ++++++..++.  +....-. ..........++++..+|.   
T Consensus         2 p~KV~Ii----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~D-l~~~~~~~~~~~~i~~~~~---   73 (322)
T cd01338           2 PVRVAVT----GAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAME-LEDCAFPLLAEIVITDDPN---   73 (322)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehh-hhhccccccCceEEecCcH---
Confidence            4699999    9999999999999998874       79999985432  2221111 0000000011233333333   


Q ss_pred             HhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcc---cccCCCCCCccCCCCC
Q 025587          145 GNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG--VKQFLFISSAG---IYKPADEPPHVEGDVV  205 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~---vy~~~~~~~~~e~~~~  205 (250)
                       +.+++  .|+||-+||              .|....+.+.+.+++++  -..+|.+|-..   .|-..     .. ...
T Consensus        74 -~~~~d--aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~-----k~-sg~  144 (322)
T cd01338          74 -VAFKD--ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM-----KN-APD  144 (322)
T ss_pred             -HHhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH-----HH-cCC
Confidence             33455  599999999              35666888888887765  33455555311   00000     00 000


Q ss_pred             CCCCChhHHHH--------HHH-HhCCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEK--------YIS-ENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k--------~~~-e~~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|....|+..+        .++ ..+++...+|..+|||++.+.
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s  188 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSPT  188 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCccc
Confidence            01112233221        222 337888889998999998653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.45  E-value=0.00026  Score=59.91  Aligned_cols=64  Identities=16%  Similarity=0.232  Sum_probs=40.9

Q ss_pred             CcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc----C-CcccEEEeC
Q 025587           85 GGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG----G-VTFDVVLDN  159 (250)
Q Consensus        85 GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~----~-~~~d~Vi~~  159 (250)
                      .++|+||++++++|+++|++|+++++... ..   ..+          ...+...|.+++.++++    . ..+|++||+
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~~~----------~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---PEP----------HPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---ccc----------CCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            45889999999999999999999876321 11   000          11233345444444332    1 248999999


Q ss_pred             CCc
Q 025587          160 NGK  162 (250)
Q Consensus       160 ag~  162 (250)
                      ||+
T Consensus        88 Agv   90 (227)
T TIGR02114        88 MAV   90 (227)
T ss_pred             CEe
Confidence            994

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.43  E-value=0.003  Score=49.25  Aligned_cols=108  Identities=19%  Similarity=0.310  Sum_probs=68.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceE--Ee
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKT--VW  138 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~--v~  138 (250)
                      +|+|+    | .|.+|.++++.|+..|. ++++++.+.-...++..+.+....+              ...+++++  +.
T Consensus         1 ~Vlii----G-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~   75 (143)
T cd01483           1 RVLLV----G-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVP   75 (143)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEe
Confidence            58999    6 69999999999999996 6999987653333332221111010              01123332  22


Q ss_pred             CC--HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          139 GD--PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       139 ~D--~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+  .+...+.+.+  +|+||++... ......+.++|++.++ .+|..++.+.+|
T Consensus        76 ~~~~~~~~~~~~~~--~diVi~~~d~-~~~~~~l~~~~~~~~i-~~i~~~~~g~~g  127 (143)
T cd01483          76 EGISEDNLDDFLDG--VDLVIDAIDN-IAVRRALNRACKELGI-PVIDAGGLGLGG  127 (143)
T ss_pred             eecChhhHHHHhcC--CCEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEcCCCcEE
Confidence            22  3333455555  7999999875 6667778899999876 677777765443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.42  E-value=0.0028  Score=52.47  Aligned_cols=111  Identities=21%  Similarity=0.323  Sum_probs=71.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCc-----------------ccchhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNR-----------------FNEIVSAGG  134 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~-----------------~~~~~~~~v  134 (250)
                      +..+|+|+    |. |.+|.++++.|+..| .++++++.+.-...++..+-+..                 +. ...+++
T Consensus        18 ~~s~Vlvi----G~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~-~lNp~v   91 (198)
T cd01485          18 RSAKVLII----GA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQ-ELNPNV   91 (198)
T ss_pred             hhCcEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHH-HHCCCC
Confidence            45799999    65 559999999999999 56999987642222222111100                 11 112334


Q ss_pred             e--EEeCC----HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          135 K--TVWGD----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       135 ~--~v~~D----~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      +  .+..+    .++..+.+..  +|+||.+.. +......+-+.|++.++ .+|+.++.+.||.
T Consensus        92 ~i~~~~~~~~~~~~~~~~~~~~--~dvVi~~~d-~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  152 (198)
T cd01485          92 KLSIVEEDSLSNDSNIEEYLQK--FTLVIATEE-NYERTAKVNDVCRKHHI-PFISCATYGLIGY  152 (198)
T ss_pred             EEEEEecccccchhhHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence            3  22222    3345555665  799998854 46666677788888887 6888888887775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd00704 MDH Malate dehydrogenase

Probab=97.41  E-value=0.0014  Score=58.40  Aligned_cols=97  Identities=13%  Similarity=0.187  Sum_probs=62.3

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-------CeEEEEEcCC--CccccCCCCCCCcccch---hcCCceEEeCCHHH
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGD--ENSDKMKKPPFNRFNEI---VSAGGKTVWGDPAE  143 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-------~~V~~l~R~~--~~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~~  143 (250)
                      +|.|+    ||+|.+|..++..|+..|       ++++++++.+  +..+.....    +.+.   ...+.+ +..   .
T Consensus         2 KV~Ii----GAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~D----l~d~~~~~~~~~~-i~~---~   69 (323)
T cd00704           2 HVLIT----GAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVME----LQDCAFPLLKGVV-ITT---D   69 (323)
T ss_pred             EEEEE----CCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeee----hhhhcccccCCcE-Eec---C
Confidence            79999    999999999999998765       2599999876  433221100    0110   001122 222   3


Q ss_pred             HHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC-CC-EEEEEc
Q 025587          144 VGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG-VK-QFLFIS  186 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~-~~-~~v~iS  186 (250)
                      ..+.+++  .|+||++||              .|....+.+.+.+++.. .. .+|.+|
T Consensus        70 ~~~~~~~--aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          70 PEEAFKD--VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hHHHhCC--CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            3555666  699999999              36777888888888863 44 455554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.39  E-value=0.0014  Score=57.91  Aligned_cols=97  Identities=24%  Similarity=0.402  Sum_probs=64.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccch---hcCCceEEeCCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~---~~~~v~~v~~D~~~l~~~l~  149 (250)
                      ++|.|+    | +|.+|+.++..|+..|  ++|++++|+++..+.+...    +.+.   ......+..+|.++    +.
T Consensus         1 ~kI~II----G-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~d----L~~~~~~~~~~~~i~~~~~~~----l~   67 (306)
T cd05291           1 RKVVII----G-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALD----LEDALAFLPSPVKIKAGDYSD----CK   67 (306)
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhh----HHHHhhccCCCeEEEcCCHHH----hC
Confidence            479999    7 5999999999999999  7899999988765543211    1111   11223333344443    34


Q ss_pred             CCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      +  .|+||.++|.              |....+.+.+.+++.+.+ .+|.+|
T Consensus        68 ~--aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          68 D--ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             C--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            4  6999999993              566677888888776544 444444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08328 hypothetical protein; Provisional

Probab=97.38  E-value=0.0028  Score=53.78  Aligned_cols=112  Identities=20%  Similarity=0.316  Sum_probs=70.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCccc---------------chhcCCceE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFN---------------EIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~---------------~~~~~~v~~  136 (250)
                      +..+|+|+     |.|.+|.++++.|...| .+++++|.+.-...++..+-+....               ....+++.+
T Consensus        26 ~~~~VlIi-----G~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v  100 (231)
T PRK08328         26 KKAKVAVV-----GVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKI  100 (231)
T ss_pred             hCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEE
Confidence            45789999     57999999999999999 5788888765333333221110000               011233332


Q ss_pred             --EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          137 --VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       137 --v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                        +..  +.+.+.+.+++  +|+||++... ...-..+-++|++.++ .+|+.+..+.||.
T Consensus       101 ~~~~~~~~~~~~~~~l~~--~D~Vid~~d~-~~~r~~l~~~~~~~~i-p~i~g~~~g~~G~  157 (231)
T PRK08328        101 ETFVGRLSEENIDEVLKG--VDVIVDCLDN-FETRYLLDDYAHKKGI-PLVHGAVEGTYGQ  157 (231)
T ss_pred             EEEeccCCHHHHHHHHhc--CCEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence              222  35667777776  6999999764 4444445567777776 6788777766664

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.38  E-value=0.0026  Score=52.87  Aligned_cols=111  Identities=18%  Similarity=0.238  Sum_probs=71.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCC---------------cccchhcCCceE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN---------------RFNEIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~---------------~~~~~~~~~v~~  136 (250)
                      ..++|+|+    | .|.+|.++++.|...|. ++++++.+.-...++..+.+.               ++.+ ..+++++
T Consensus        20 ~~~~Vlvi----G-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v~i   93 (202)
T TIGR02356        20 LNSHVLII----G-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRE-LNSDIQV   93 (202)
T ss_pred             cCCCEEEE----C-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHH-hCCCCEE
Confidence            45789999    5 89999999999999995 899998864222222211110               0111 1223332


Q ss_pred             Ee----CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          137 VW----GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       137 v~----~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ..    .+.+++.+.+.+  +|+||.+.. +...-..+-+.|++.++ .+|+.+..+.+|.
T Consensus        94 ~~~~~~i~~~~~~~~~~~--~D~Vi~~~d-~~~~r~~l~~~~~~~~i-p~i~~~~~g~~G~  150 (202)
T TIGR02356        94 TALKERVTAENLELLINN--VDLVLDCTD-NFATRYLINDACVALGT-PLISAAVVGFGGQ  150 (202)
T ss_pred             EEehhcCCHHHHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCeEE
Confidence            21    235667777776  799999875 45555566678888776 6788777666553

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.37  E-value=0.0001  Score=57.20  Aligned_cols=75  Identities=16%  Similarity=0.265  Sum_probs=52.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ...++|+|+    | +|.+|+.++..|.+.|.+ |+++.|+.++.+.+.+.       +....+..+  +.+++.+.+..
T Consensus        10 l~~~~vlvi----G-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~-------~~~~~~~~~--~~~~~~~~~~~   75 (135)
T PF01488_consen   10 LKGKRVLVI----G-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEE-------FGGVNIEAI--PLEDLEEALQE   75 (135)
T ss_dssp             GTTSEEEEE----S-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHH-------HTGCSEEEE--EGGGHCHHHHT
T ss_pred             cCCCEEEEE----C-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-------cCcccccee--eHHHHHHHHhh
Confidence            357899999    6 599999999999999976 99999988766544221       111223333  44556666666


Q ss_pred             CcccEEEeCCCc
Q 025587          151 VTFDVVLDNNGK  162 (250)
Q Consensus       151 ~~~d~Vi~~ag~  162 (250)
                        +|+||++.+.
T Consensus        76 --~DivI~aT~~   85 (135)
T PF01488_consen   76 --ADIVINATPS   85 (135)
T ss_dssp             --ESEEEE-SST
T ss_pred             --CCeEEEecCC
Confidence              7999999774

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.36  E-value=0.0017  Score=49.35  Aligned_cols=96  Identities=20%  Similarity=0.214  Sum_probs=56.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      ||.|+    ||||++|..+++.|++. .+++..+....+ .-..+... +....  ...++.+...|.+.+    .+  +
T Consensus         1 rV~Iv----GAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~-~~~~~--~~~~~~~~~~~~~~~----~~--~   67 (121)
T PF01118_consen    1 RVAIV----GATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEV-FPHPK--GFEDLSVEDADPEEL----SD--V   67 (121)
T ss_dssp             EEEEE----STTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHT-TGGGT--TTEEEBEEETSGHHH----TT--E
T ss_pred             CEEEE----CCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehh-ccccc--cccceeEeecchhHh----hc--C
Confidence            68999    99999999999999986 366555554443 22211110 00000  011222333344444    33  7


Q ss_pred             cEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       154 d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      |+||.|.+  -.....+.+.+.+.|+ ++|=+|+
T Consensus        68 Dvvf~a~~--~~~~~~~~~~~~~~g~-~ViD~s~   98 (121)
T PF01118_consen   68 DVVFLALP--HGASKELAPKLLKAGI-KVIDLSG   98 (121)
T ss_dssp             SEEEE-SC--HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred             CEEEecCc--hhHHHHHHHHHhhCCc-EEEeCCH
Confidence            99999976  3445667777777777 6665555

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.32  E-value=0.0021  Score=57.86  Aligned_cols=102  Identities=22%  Similarity=0.231  Sum_probs=59.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCC--CCCcccchhc--CCceEEeCCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKP--PFNRFNEIVS--AGGKTVWGDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~--~~~~~~~~~~--~~v~~v~~D~~~l~~~  147 (250)
                      |+++|.|+    ||+|++|+.+++.|++.. .+++++.++.+...+....  ++..+..+..  .++.+...|++.+   
T Consensus         2 ~~~~V~I~----GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---   74 (349)
T PRK08664          2 MKLKVGIL----GATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAV---   74 (349)
T ss_pred             CCcEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHh---
Confidence            35799999    999999999999999875 4888885554332221110  0000000011  1223333355543   


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .+  +|+|+.+.+.++  ...+++.+.+.|++ +|-.|+
T Consensus        75 -~~--~DvVf~a~p~~~--s~~~~~~~~~~G~~-vIDls~  108 (349)
T PRK08664         75 -DD--VDIVFSALPSDV--AGEVEEEFAKAGKP-VFSNAS  108 (349)
T ss_pred             -cC--CCEEEEeCChhH--HHHHHHHHHHCCCE-EEECCc
Confidence             23  799998877543  35555777777875 444444

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.29  E-value=0.011  Score=50.24  Aligned_cols=107  Identities=16%  Similarity=0.273  Sum_probs=66.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCC--------c-------ccchhcCCceE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFN--------R-------FNEIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~--------~-------~~~~~~~~v~~  136 (250)
                      +..+|+|+     |.|.+|.++++.|+..| .++++++.+.=...++..+-+.        +       +.+ ..+++++
T Consensus        10 ~~~~VlVv-----G~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~-inP~~~V   83 (231)
T cd00755          10 RNAHVAVV-----GLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRD-INPECEV   83 (231)
T ss_pred             hCCCEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHH-HCCCcEE
Confidence            45789999     58999999999999999 5788888654222222111110        0       001 1233332


Q ss_pred             EeC----CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          137 VWG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       137 v~~----D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ...    +++.+.+.+.. ++|+||++.. ++.....+.++|++.++ .||...+.
T Consensus        84 ~~~~~~i~~~~~~~l~~~-~~D~VvdaiD-~~~~k~~L~~~c~~~~i-p~I~s~g~  136 (231)
T cd00755          84 DAVEEFLTPDNSEDLLGG-DPDFVVDAID-SIRAKVALIAYCRKRKI-PVISSMGA  136 (231)
T ss_pred             EEeeeecCHhHHHHHhcC-CCCEEEEcCC-CHHHHHHHHHHHHHhCC-CEEEEeCC
Confidence            222    25666666643 3899999976 45566778899999876 45554443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.28  E-value=0.00023  Score=55.75  Aligned_cols=101  Identities=18%  Similarity=0.271  Sum_probs=63.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +||.|+    |++|.+|.+++..|+..+  .++++++++++..+..... ++...........+..+|.+++    ++  
T Consensus         1 ~KV~Ii----Ga~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~D-l~~~~~~~~~~~~i~~~~~~~~----~~--   69 (141)
T PF00056_consen    1 MKVAII----GAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALD-LSHASAPLPSPVRITSGDYEAL----KD--   69 (141)
T ss_dssp             SEEEEE----STTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHH-HHHHHHGSTEEEEEEESSGGGG----TT--
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehh-hhhhhhhccccccccccccccc----cc--
Confidence            589999    999999999999999886  7899999986543321100 0000001111233334445544    44  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      .|+||-++|              .|....+.+.+.+.+.+.+ .+|.++
T Consensus        70 aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   70 ADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             ESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            599999998              2566677778887776543 455544

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.28  E-value=0.0044  Score=52.88  Aligned_cols=111  Identities=14%  Similarity=0.195  Sum_probs=69.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~v  137 (250)
                      ...+|+|+     |.|.+|..+++.|+..| -+++++|.+.-...++..+-+....+              ...+++++.
T Consensus        23 ~~~~Vlvv-----G~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~   97 (240)
T TIGR02355        23 KASRVLIV-----GLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAIN   97 (240)
T ss_pred             hCCcEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence            45789999     57999999999999999 57888887654433333221111000              012333322


Q ss_pred             e----CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          138 W----GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       138 ~----~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .    .|.+++.+.+.+  +|+||++... ......+-++|.+.++ .+|+-+..+.+|
T Consensus        98 ~~~~~i~~~~~~~~~~~--~DlVvd~~D~-~~~r~~ln~~~~~~~i-p~v~~~~~g~~G  152 (240)
T TIGR02355        98 PINAKLDDAELAALIAE--HDIVVDCTDN-VEVRNQLNRQCFAAKV-PLVSGAAIRMEG  152 (240)
T ss_pred             EEeccCCHHHHHHHhhc--CCEEEEcCCC-HHHHHHHHHHHHHcCC-CEEEEEecccEe
Confidence            2    235667777777  6999999753 4444556677888776 567666554444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.26  E-value=0.0023  Score=57.53  Aligned_cols=103  Identities=18%  Similarity=0.097  Sum_probs=61.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      |+++|.|+    ||||++|+.+++.|.+. +++++++.+..+..+.+.+. +..+..    .......|.++.  .+.+ 
T Consensus         1 ~m~kVaIi----GAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~-~~~~~~----~~~~~~~~~~~~--~~~~-   68 (343)
T PRK00436          1 MMIKVGIV----GASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDV-HPHLRG----LVDLVLEPLDPE--ILAG-   68 (343)
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHh-Cccccc----ccCceeecCCHH--HhcC-
Confidence            45799999    99999999999999987 68888877643222211110 000000    001111122222  2333 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                       +|+|+.+...  .....++..+.++| +++|=.|+..-+
T Consensus        69 -vD~Vf~alP~--~~~~~~v~~a~~aG-~~VID~S~~fR~  104 (343)
T PRK00436         69 -ADVVFLALPH--GVSMDLAPQLLEAG-VKVIDLSADFRL  104 (343)
T ss_pred             -CCEEEECCCc--HHHHHHHHHHHhCC-CEEEECCcccCC
Confidence             7999988764  35566677776666 478888875543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.25  E-value=0.0056  Score=52.51  Aligned_cols=90  Identities=17%  Similarity=0.267  Sum_probs=63.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      |+++|||.    |||+ =|+.+++.|.+.|++|++..-.+....             ...++.+..+   |.+++.+.++
T Consensus         1 ~~~~Ilvl----gGT~-egr~la~~L~~~g~~v~~Svat~~g~~-------------~~~~~~v~~G~l~~~~~l~~~l~   62 (248)
T PRK08057          1 MMPRILLL----GGTS-EARALARALAAAGVDIVLSLAGRTGGP-------------ADLPGPVRVGGFGGAEGLAAYLR   62 (248)
T ss_pred             CCceEEEE----echH-HHHHHHHHHHhCCCeEEEEEccCCCCc-------------ccCCceEEECCCCCHHHHHHHHH
Confidence            46789999    9886 599999999999999888766553221             0113333332   7899999999


Q ss_pred             CCcccEEEeCCC-cCHHhHHHHHHHHHhCCCC
Q 025587          150 GVTFDVVLDNNG-KNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       150 ~~~~d~Vi~~ag-~~~~~~~~ll~~~~~~~~~  180 (250)
                      +.++++|||..- .....+.++.++|++.++.
T Consensus        63 ~~~i~~VIDATHPfA~~is~~a~~ac~~~~ip   94 (248)
T PRK08057         63 EEGIDLVIDATHPYAAQISANAAAACRALGIP   94 (248)
T ss_pred             HCCCCEEEECCCccHHHHHHHHHHHHHHhCCc
Confidence            888999999865 3344566666666665543

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.24  E-value=0.005  Score=52.74  Aligned_cols=109  Identities=15%  Similarity=0.222  Sum_probs=67.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~-  136 (250)
                      ..++|+|+    |+ |.+|..+++.|+..| .++++++.+.-...++..+.+....+              ...+++++ 
T Consensus        31 ~~~~Vlii----G~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~  105 (245)
T PRK05690         31 KAARVLVV----GL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIE  105 (245)
T ss_pred             cCCeEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEE
Confidence            46799999    65 999999999999999 57888887542222222111110000              01233332 


Q ss_pred             -EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       137 -v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                       +..  +.+.+.+.+.+  +|+||++.. +...-..+-++|++.++ .+|+.+..+.
T Consensus       106 ~~~~~i~~~~~~~~~~~--~DiVi~~~D-~~~~r~~ln~~~~~~~i-p~v~~~~~g~  158 (245)
T PRK05690        106 TINARLDDDELAALIAG--HDLVLDCTD-NVATRNQLNRACFAAKK-PLVSGAAIRM  158 (245)
T ss_pred             EEeccCCHHHHHHHHhc--CCEEEecCC-CHHHHHHHHHHHHHhCC-EEEEeeeccC
Confidence             222  25566677776  799999975 45555556677888775 5776555443

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.21  E-value=0.0029  Score=56.06  Aligned_cols=102  Identities=21%  Similarity=0.278  Sum_probs=61.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcC--CceEEe-CCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVW-GDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~--~v~~v~-~D~~~l~~~l~  149 (250)
                      |+|.|+    |++|.+|..++..|+..|+  +|++++|.+ ..+.+......-.+.+...  ...+.. .|.   . .+.
T Consensus         1 ~kI~Ii----GatG~vG~~~a~~l~~~g~~~~v~lvd~~~-~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~---~-~l~   71 (309)
T cd05294           1 MKVSII----GASGRVGSATALLLAKEDVVKEINLISRPK-SLEKLKGLRLDIYDALAAAGIDAEIKISSDL---S-DVA   71 (309)
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEECcc-cccccccccchhhhchhccCCCcEEEECCCH---H-HhC
Confidence            589999    9999999999999999986  499999954 2222211111000111111  122222 243   2 255


Q ss_pred             CCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          150 GVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      +  .|+||-++|.              |....+.+++.+.+.+.+ .+|.+++
T Consensus        72 ~--aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          72 G--SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             C--CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            5  5999999982              335566677766665433 5666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.20  E-value=0.0017  Score=60.20  Aligned_cols=92  Identities=23%  Similarity=0.408  Sum_probs=61.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~~  150 (250)
                      |+|+|+    |+ |.+|+++++.|.++|++|++++++++..+.+.+          ..++.++.+|   .+.+.++ +.+
T Consensus         1 m~viIi----G~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----------~~~~~~~~gd~~~~~~l~~~~~~~   65 (453)
T PRK09496          1 MKIIIV----GA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----------RLDVRTVVGNGSSPDVLREAGAED   65 (453)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----------hcCEEEEEeCCCCHHHHHHcCCCc
Confidence            589999    76 999999999999999999999998765543211          1356777777   4555555 444


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~  184 (250)
                        .|+||-+...+ .....+...+++. +..++|.
T Consensus        66 --a~~vi~~~~~~-~~n~~~~~~~r~~~~~~~ii~   97 (453)
T PRK09496         66 --ADLLIAVTDSD-ETNMVACQIAKSLFGAPTTIA   97 (453)
T ss_pred             --CCEEEEecCCh-HHHHHHHHHHHHhcCCCeEEE
Confidence              78888776532 2223344555554 5545444

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.20  E-value=0.0061  Score=50.46  Aligned_cols=112  Identities=18%  Similarity=0.259  Sum_probs=68.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~-  136 (250)
                      +..+|+|+    |. |.+|.++++.|+..| .+++++|...=...++..+-+.....              ...+++++ 
T Consensus        20 ~~s~VlIi----G~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~   94 (197)
T cd01492          20 RSARILLI----GL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVS   94 (197)
T ss_pred             HhCcEEEE----cC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEE
Confidence            45799999    75 559999999999999 56888887642222222111110000              11233332 


Q ss_pred             -EeCC-HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          137 -VWGD-PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       137 -v~~D-~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                       +... .+...+.+.+  +|+||.+.. +......+-++|++.++ .+|+.++.+.||.
T Consensus        95 ~~~~~~~~~~~~~~~~--~dvVi~~~~-~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~  149 (197)
T cd01492          95 VDTDDISEKPEEFFSQ--FDVVVATEL-SRAELVKINELCRKLGV-KFYATGVHGLFGF  149 (197)
T ss_pred             EEecCccccHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence             2221 1223444555  799998765 56666677788888887 6888888777764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08223 hypothetical protein; Validated

Probab=97.19  E-value=0.0058  Score=53.40  Aligned_cols=108  Identities=17%  Similarity=0.112  Sum_probs=67.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~v  137 (250)
                      ...+|+|+     |.|.+|..+++.|+..| -+++++|.+.=...++..+-+....+              ...+.+++.
T Consensus        26 ~~s~VlIv-----G~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~  100 (287)
T PRK08223         26 RNSRVAIA-----GLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR  100 (287)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence            45789999     57999999999999999 57888887642223332221111110              113334432


Q ss_pred             eC----CHHHHHhhhcCCcccEEEeCCCc-CHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          138 WG----DPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       138 ~~----D~~~l~~~l~~~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..    +.+++.+++.+  +|+||++... +...-..+-++|.+.++ .+|+.+..
T Consensus       101 ~~~~~l~~~n~~~ll~~--~DlVvD~~D~~~~~~r~~ln~~c~~~~i-P~V~~~~~  153 (287)
T PRK08223        101 AFPEGIGKENADAFLDG--VDVYVDGLDFFEFDARRLVFAACQQRGI-PALTAAPL  153 (287)
T ss_pred             EEecccCccCHHHHHhC--CCEEEECCCCCcHHHHHHHHHHHHHcCC-CEEEEecc
Confidence            22    36677788877  7999988753 23445556678888876 56766543

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.18  E-value=0.0021  Score=57.39  Aligned_cols=97  Identities=22%  Similarity=0.271  Sum_probs=65.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce--EE--eCC-HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TV--WGD-PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~--~v--~~D-~~~l~~~l  148 (250)
                      ..+|||+    ||+|.+|...++.+...|+.|++.+.+.++.+.++           ..+..  +.  ..| .+.+.++.
T Consensus       143 g~~VLV~----gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-----------~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         143 GETVLVH----GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-----------ELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-----------hcCCCEEEcCCcccHHHHHHHHc
Confidence            6899999    99999999999999999988777777665544221           12222  11  122 45555666


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+..+|+|++..|..  .....+..++. + ++++.++..+
T Consensus       208 ~g~gvDvv~D~vG~~--~~~~~l~~l~~-~-G~lv~ig~~~  244 (326)
T COG0604         208 GGKGVDVVLDTVGGD--TFAASLAALAP-G-GRLVSIGALS  244 (326)
T ss_pred             CCCCceEEEECCCHH--HHHHHHHHhcc-C-CEEEEEecCC
Confidence            666799999998833  23334555554 3 6888887765

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.12  E-value=0.0024  Score=58.33  Aligned_cols=73  Identities=25%  Similarity=0.326  Sum_probs=49.3

Q ss_pred             ccCcEEEEEecCCCc----------------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce
Q 025587           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK  135 (250)
Q Consensus        72 ~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~  135 (250)
                      .++++||||    ||                +|.+|.+++++|.++|++|+++.+......              ..++.
T Consensus       183 ~~~~~vlit----~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------------~~~~~  244 (390)
T TIGR00521       183 LEGKRVLIT----AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------------PPGVK  244 (390)
T ss_pred             cCCceEEEe----cCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------------CCCcE
Confidence            356899999    77                468999999999999999999887653210              01122


Q ss_pred             -EEeCCHHHH-HhhhcC--CcccEEEeCCCc
Q 025587          136 -TVWGDPAEV-GNVVGG--VTFDVVLDNNGK  162 (250)
Q Consensus       136 -~v~~D~~~l-~~~l~~--~~~d~Vi~~ag~  162 (250)
                       +...+.+++ +.+++.  ..+|++|++||+
T Consensus       245 ~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aav  275 (390)
T TIGR00521       245 SIKVSTAEEMLEAALNELAKDFDIFISAAAV  275 (390)
T ss_pred             EEEeccHHHHHHHHHHhhcccCCEEEEcccc
Confidence             223345555 434421  147999999993

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.12  E-value=0.011  Score=51.35  Aligned_cols=109  Identities=16%  Similarity=0.295  Sum_probs=69.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCccc-----------c---hhcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFN-----------E---IVSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~-----------~---~~~~~v~~-  136 (250)
                      ...+|+|+     |.|.+|.++++.|+..| -++++++.+.-...++..+-+....           +   ...+++++ 
T Consensus        29 ~~s~VlVv-----G~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~  103 (268)
T PRK15116         29 ADAHICVV-----GIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVT  103 (268)
T ss_pred             cCCCEEEE-----CcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEE
Confidence            45789999     57999999999999999 7899998765333333221110000           0   01233332 


Q ss_pred             -EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       137 -v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                       +..  +++.+.+.+.. ++|+||++.. ++.....+.++|++.++ .||..+.++
T Consensus       104 ~i~~~i~~e~~~~ll~~-~~D~VIdaiD-~~~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116        104 VVDDFITPDNVAEYMSA-GFSYVIDAID-SVRPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             EEecccChhhHHHHhcC-CCCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEECCcc
Confidence             211  35666676643 3899999987 44556678899999876 566655544

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.12  E-value=0.014  Score=46.60  Aligned_cols=67  Identities=21%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC----------HHH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD----------PAE  143 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D----------~~~  143 (250)
                      .+|+|-    ||-|-+|+++++.+.+++|-|.-++..+. ..+               ..+ ++.+|          .+.
T Consensus         4 grVivY----GGkGALGSacv~~FkannywV~siDl~eNe~Ad---------------~sI-~V~~~~swtEQe~~v~~~   63 (236)
T KOG4022|consen    4 GRVIVY----GGKGALGSACVEFFKANNYWVLSIDLSENEQAD---------------SSI-LVDGNKSWTEQEQSVLEQ   63 (236)
T ss_pred             ceEEEE----cCcchHhHHHHHHHHhcCeEEEEEeeccccccc---------------ceE-EecCCcchhHHHHHHHHH
Confidence            589999    99999999999999999999998887652 111               011 12222          456


Q ss_pred             HHhhhcCCcccEEEeCCC
Q 025587          144 VGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag  161 (250)
                      +.+.+++.++|+|+..||
T Consensus        64 vg~sL~gekvDav~CVAG   81 (236)
T KOG4022|consen   64 VGSSLQGEKVDAVFCVAG   81 (236)
T ss_pred             HHHhhcccccceEEEeec
Confidence            677788889999999887

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.11  E-value=0.0092  Score=55.29  Aligned_cols=157  Identities=8%  Similarity=-0.005  Sum_probs=87.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-------CC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-------GH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-------G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l  144 (250)
                      .-+|.|+    |++|.+|.+++-.|+..       |.  ++++++++++..+...-.-.+-...+. .++.+..+|.+++
T Consensus       100 ~~KV~II----GAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~-~~v~i~~~~ye~~  174 (444)
T PLN00112        100 LINVAVS----GAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL-REVSIGIDPYEVF  174 (444)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc-CceEEecCCHHHh
Confidence            3589999    99999999999999988       64  788889887665432111000000011 1333333454444


Q ss_pred             HhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHh-CCCC-EEEEEcCcc-----cc-cCCCCCC---c
Q 025587          145 GNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKS-SGVK-QFLFISSAG-----IY-KPADEPP---H  199 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~-~~~~-~~v~iSS~~-----vy-~~~~~~~---~  199 (250)
                          ++  .|+||-.+|              .|....+.+.+.+.+ ++.. .+|.+|-..     +. ......+   +
T Consensus       175 ----kd--aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~~rVi  248 (444)
T PLN00112        175 ----QD--AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNF  248 (444)
T ss_pred             ----Cc--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCCcceE
Confidence                44  599999999              356678888888888 4544 455555311     11 0000000   0


Q ss_pred             cCCCCCCCCCChhHHHHHHH-HhCCcEEEEecCeeecCCCCCCcccc
Q 025587          200 VEGDVVKPDAGHVQVEKYIS-ENFSNWASFRPQYMIGSGNNKDCEEW  245 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~-e~~~~~~ilRp~~i~G~~~~~~~~~~  245 (250)
                      --...+    .....-..++ ..+++..-|.-.+|+|.+.+.-+..|
T Consensus       249 GtgT~L----DsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsqvp~w  291 (444)
T PLN00112        249 HALTRL----DENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDF  291 (444)
T ss_pred             EeeccH----HHHHHHHHHHHHhCcCHHHcccceEEecCCCceeecc
Confidence            000111    1122222333 34677777777788898766544443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.04  E-value=0.0088  Score=54.04  Aligned_cols=111  Identities=18%  Similarity=0.182  Sum_probs=68.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~v  137 (250)
                      +..+|+|+    | .|.+|.++++.|+..| -++++++.+.=...++..+-+....+              ...+.+++.
T Consensus        27 ~~~~Vliv----G-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~  101 (355)
T PRK05597         27 FDAKVAVI----G-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVT  101 (355)
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEE
Confidence            45799999    5 6999999999999999 57888887653333332221111000              112333322


Q ss_pred             --e--CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          138 --W--GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       138 --~--~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                        .  .+.++..+.+.+  +|+||++.. +...-..+-++|.+.++ .||+.+..+.+|
T Consensus       102 ~~~~~i~~~~~~~~~~~--~DvVvd~~d-~~~~r~~~n~~c~~~~i-p~v~~~~~g~~g  156 (355)
T PRK05597        102 VSVRRLTWSNALDELRD--ADVILDGSD-NFDTRHLASWAAARLGI-PHVWASILGFDA  156 (355)
T ss_pred             EEEeecCHHHHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEEecCeE
Confidence              2  235666777777  799999976 34333345567777776 577776655444

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.04  E-value=0.00096  Score=58.52  Aligned_cols=77  Identities=13%  Similarity=0.198  Sum_probs=49.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCC---CccccCCCCCCCcccchhcCCceEEeC---CHHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~  145 (250)
                      ++++++|+    || |++|++++..|++.|++ |++++|+.   ++.+.+.+.    +.. ....+.+...   |.+++.
T Consensus       125 ~~k~vlI~----GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~----l~~-~~~~~~~~~~d~~~~~~~~  194 (289)
T PRK12548        125 KGKKLTVI----GA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEK----IKQ-EVPECIVNVYDLNDTEKLK  194 (289)
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHH----Hhh-cCCCceeEEechhhhhHHH
Confidence            35789999    87 89999999999999986 99999986   333322110    000 0011222223   345566


Q ss_pred             hhhcCCcccEEEeCCC
Q 025587          146 NVVGGVTFDVVLDNNG  161 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag  161 (250)
                      +.+..  .|+|||+..
T Consensus       195 ~~~~~--~DilINaTp  208 (289)
T PRK12548        195 AEIAS--SDILVNATL  208 (289)
T ss_pred             hhhcc--CCEEEEeCC
Confidence            65555  588888865

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.03  E-value=0.0019  Score=56.66  Aligned_cols=92  Identities=13%  Similarity=0.152  Sum_probs=58.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      .+++|+|+    | .|.+|+.+++.|...|++|++.+|+.+.....           ...+...  .+.+++.+.+++  
T Consensus       150 ~gk~v~Ii----G-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-----------~~~g~~~--~~~~~l~~~l~~--  209 (287)
T TIGR02853       150 HGSNVMVL----G-FGRTGMTIARTFSALGARVFVGARSSADLARI-----------TEMGLIP--FPLNKLEEKVAE--  209 (287)
T ss_pred             CCCEEEEE----c-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHCCCee--ecHHHHHHHhcc--
Confidence            36899999    5 59999999999999999999999987433211           1112221  235566777766  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||++....+. ....++.+++ + .-+|-+++
T Consensus       210 aDiVint~P~~ii-~~~~l~~~k~-~-aliIDlas  241 (287)
T TIGR02853       210 IDIVINTIPALVL-TADVLSKLPK-H-AVIIDLAS  241 (287)
T ss_pred             CCEEEECCChHHh-CHHHHhcCCC-C-eEEEEeCc
Confidence            6999988764322 1234444433 1 24555655

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.03  E-value=0.0045  Score=57.32  Aligned_cols=99  Identities=24%  Similarity=0.316  Sum_probs=65.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++|+|+    |+ |.+|+.+++.|.+.|++|++++++++..+.+.+.         ..++.++.+|   ++.+.++- 
T Consensus       230 ~~~~iiIi----G~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~---------~~~~~~i~gd~~~~~~L~~~~-  294 (453)
T PRK09496        230 PVKRVMIV----GG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE---------LPNTLVLHGDGTDQELLEEEG-  294 (453)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------CCCCeEEECCCCCHHHHHhcC-
Confidence            35889999    65 9999999999999999999999988654432111         1256677887   44444432 


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      -.+.|+||-+...+ .....+...+++.+.+++|....
T Consensus       295 ~~~a~~vi~~~~~~-~~n~~~~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        295 IDEADAFIALTNDD-EANILSSLLAKRLGAKKVIALVN  331 (453)
T ss_pred             CccCCEEEECCCCc-HHHHHHHHHHHHhCCCeEEEEEC
Confidence            22478888776543 22222344556667777665544

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.03  E-value=0.0049  Score=52.16  Aligned_cols=112  Identities=20%  Similarity=0.360  Sum_probs=76.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc----hhcCCceEEe---CC----
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE----IVSAGGKTVW---GD----  140 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~----~~~~~v~~v~---~D----  140 (250)
                      |++-++     |-|.+|..++++|++.||+|++.+++++..+.+.+....   .+.+    +..+.+.++.   +|    
T Consensus         1 M~iGmi-----GLGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~   75 (300)
T COG1023           1 MQIGMI-----GLGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDA   75 (300)
T ss_pred             Ccceee-----ccchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHH
Confidence            346667     689999999999999999999999988665554433211   1111    2223333322   23    


Q ss_pred             -HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc-ccccCC
Q 025587          141 -PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA-GIYKPA  194 (250)
Q Consensus       141 -~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~-~vy~~~  194 (250)
                       .+++...+..  =|+||+-...|+....+-...+++.|+ +|+=+++. ++.|..
T Consensus        76 vi~~la~~L~~--GDivIDGGNS~y~Ds~rr~~~l~~kgi-~flD~GTSGG~~G~~  128 (300)
T COG1023          76 VIDDLAPLLSA--GDIVIDGGNSNYKDSLRRAKLLAEKGI-HFLDVGTSGGVWGAE  128 (300)
T ss_pred             HHHHHHhhcCC--CCEEEECCccchHHHHHHHHHHHhcCC-eEEeccCCCCchhhh
Confidence             5566666655  499999988889888888888888888 78887765 455443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.02  E-value=0.0053  Score=54.76  Aligned_cols=155  Identities=10%  Similarity=0.091  Sum_probs=81.4

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-------CeEEEEEcCCCc--cccCCCCCCCcccchh-cCCceEEeCCHHHHH
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDEN--SDKMKKPPFNRFNEIV-SAGGKTVWGDPAEVG  145 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-------~~V~~l~R~~~~--~~~~~~~~~~~~~~~~-~~~v~~v~~D~~~l~  145 (250)
                      +|.|+    |++|.+|..++..|+..|       ++++++++.++.  .+....    .+.+.. ......+..+  +..
T Consensus         1 ~V~Ii----GaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~----Dl~d~~~~~~~~~~~~~--~~~   70 (324)
T TIGR01758         1 RVVVT----GAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVM----ELMDCAFPLLDGVVPTH--DPA   70 (324)
T ss_pred             CEEEE----CCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEe----ehhcccchhcCceeccC--ChH
Confidence            58999    999999999999998754       369999986532  221110    000000 0000111111  224


Q ss_pred             hhhcCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCC-C-CEEEEEcCcc-----cc-cCCCCCCccCCC
Q 025587          146 NVVGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSG-V-KQFLFISSAG-----IY-KPADEPPHVEGD  203 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~-~-~~~v~iSS~~-----vy-~~~~~~~~~e~~  203 (250)
                      +.+++  .|+||++||.              |+...+.+.+.++++. . ..+|.+|-..     +. ......|  .. 
T Consensus        71 ~~~~~--aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~~~--~~-  145 (324)
T TIGR01758        71 VAFTD--VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPSIP--PK-  145 (324)
T ss_pred             HHhCC--CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCCCC--cc-
Confidence            45566  6999999992              5666888888888863 4 3455555311     00 0000000  00 


Q ss_pred             CCCC--CCChhHHHHHHHH-hCCcEEEEecCeeecCCCCCCcccc
Q 025587          204 VVKP--DAGHVQVEKYISE-NFSNWASFRPQYMIGSGNNKDCEEW  245 (250)
Q Consensus       204 ~~~~--~~~~y~~~k~~~e-~~~~~~ilRp~~i~G~~~~~~~~~~  245 (250)
                      ...-  .......-.++++ .+++..-++-.+|+|.+.+.-...|
T Consensus       146 vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s~v~~~  190 (324)
T TIGR01758       146 NFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSSTQYPDV  190 (324)
T ss_pred             eEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCCccccc
Confidence            0000  0012223334444 3577666777788888766544333

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.02  E-value=0.0035  Score=56.25  Aligned_cols=90  Identities=19%  Similarity=0.240  Sum_probs=55.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEE---EEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVT---IMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~---~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +|.|+    ||+|++|+.|++.|.++||.+.   .+.+..+.-..+.         +  .+......|.+  .+.+.+  
T Consensus         1 ~VaIv----GAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~---------~--~~~~~~~~~~~--~~~~~~--   61 (339)
T TIGR01296         1 NVAIV----GATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT---------F--KGKELEVNEAK--IESFEG--   61 (339)
T ss_pred             CEEEE----cCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee---------e--CCeeEEEEeCC--hHHhcC--
Confidence            58999    9999999999999999888754   3445543222211         1  12233333322  122344  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +|+||.++|..  ....++..+.+.|. ++|=.|+
T Consensus        62 ~D~v~~a~g~~--~s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        62 IDIALFSAGGS--VSKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             CCEEEECCCHH--HHHHHHHHHHHCCC-EEEECCH
Confidence            79999999854  45555666666676 5665555

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.00  E-value=0.0088  Score=51.54  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=28.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEE-EcCCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDE  113 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l-~R~~~  113 (250)
                      ++|.|+    |++|.+|+.+++.+.+. +.+++++ ++..+
T Consensus         2 mkV~Ii----G~~G~mG~~i~~~l~~~~~~elvav~d~~~~   38 (257)
T PRK00048          2 IKVAVA----GASGRMGRELIEAVEAAEDLELVAAVDRPGS   38 (257)
T ss_pred             cEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCCc
Confidence            689999    99999999999988864 6887775 44443

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.97  E-value=0.0035  Score=58.10  Aligned_cols=88  Identities=28%  Similarity=0.417  Sum_probs=55.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~~~  151 (250)
                      .+++|+|+    |+.| +|..+++.|+++|++|++.++..+.....       ...+...++++..++ ..++   +.. 
T Consensus         4 ~~k~v~v~----G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~-------~~~l~~~g~~~~~~~~~~~~---~~~-   67 (447)
T PRK02472          4 QNKKVLVL----GLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPE-------AQELLEEGIKVICGSHPLEL---LDE-   67 (447)
T ss_pred             CCCEEEEE----eeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhH-------HHHHHhcCCEEEeCCCCHHH---hcC-
Confidence            35789999    9877 99999999999999999998765322110       111233456655543 3332   221 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSG  178 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~  178 (250)
                      .+|.||..+|+...  ..++++|++.|
T Consensus        68 ~~d~vV~s~gi~~~--~~~~~~a~~~~   92 (447)
T PRK02472         68 DFDLMVKNPGIPYT--NPMVEKALEKG   92 (447)
T ss_pred             cCCEEEECCCCCCC--CHHHHHHHHCC
Confidence            27999999985432  23444554443

>PRK04148 hypothetical protein; Provisional

Probab=96.95  E-value=0.0037  Score=48.38  Aligned_cols=92  Identities=18%  Similarity=0.214  Sum_probs=64.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHH-HHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAE-VGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~-l~~~l~~~  151 (250)
                      ++++|+++     |+| .|..+++.|.+.|++|++++.+++..+..           ....+.++.+|.-+ =.++-++ 
T Consensus        16 ~~~kileI-----G~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-----------~~~~~~~v~dDlf~p~~~~y~~-   77 (134)
T PRK04148         16 KNKKIVEL-----GIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-----------KKLGLNAFVDDLFNPNLEIYKN-   77 (134)
T ss_pred             cCCEEEEE-----Eec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HHhCCeEEECcCCCCCHHHHhc-
Confidence            34789999     578 89999999999999999999998654432           22345677777111 1111223 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                       .|.|+..-. ..+....+++.+++.+..-+|.
T Consensus        78 -a~liysirp-p~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         78 -AKLIYSIRP-PRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             -CCEEEEeCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence             577776532 4677889999999988865554

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.91  E-value=0.012  Score=53.89  Aligned_cols=112  Identities=16%  Similarity=0.205  Sum_probs=70.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~-  136 (250)
                      +..+|+|+     |.|.+|..+++.|...|. +++++|.+.=...++..+-+....+              ...+.+++ 
T Consensus        41 ~~~~Vlvi-----G~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~  115 (392)
T PRK07878         41 KNARVLVI-----GAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVR  115 (392)
T ss_pred             hcCCEEEE-----CCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEE
Confidence            45799999     579999999999999994 6888876542222232211111010              11233443 


Q ss_pred             -EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       137 -v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                       +..  +.+++.+.+.+  +|+||++.. +...-..+-++|.+.++ .||+.+..+.+|.
T Consensus       116 ~~~~~i~~~~~~~~~~~--~D~Vvd~~d-~~~~r~~ln~~~~~~~~-p~v~~~~~g~~G~  171 (392)
T PRK07878        116 LHEFRLDPSNAVELFSQ--YDLILDGTD-NFATRYLVNDAAVLAGK-PYVWGSIYRFEGQ  171 (392)
T ss_pred             EEeccCChhHHHHHHhc--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence             222  35566777777  799999875 34444445577788775 5888777766664

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.90  E-value=0.0087  Score=53.62  Aligned_cols=95  Identities=16%  Similarity=0.180  Sum_probs=57.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE--EEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI--MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~--l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +++|.|+    ||||++|..+++.|.+++|.+.-  ..++.+...+.       +. +......+...|.++    +.+ 
T Consensus         4 ~~~IaIv----GATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~-------l~-~~~~~l~~~~~~~~~----~~~-   66 (336)
T PRK05671          4 PLDIAVV----GATGTVGEALVQILEERDFPVGTLHLLASSESAGHS-------VP-FAGKNLRVREVDSFD----FSQ-   66 (336)
T ss_pred             CCEEEEE----ccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCe-------ec-cCCcceEEeeCChHH----hcC-
Confidence            3789999    99999999999999987765433  22333222210       00 111122222223322    344 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                       +|+|+-+.+.  .....+++.+.+.|+ ++|=.|+..
T Consensus        67 -vD~vFla~p~--~~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         67 -VQLAFFAAGA--AVSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             -CCEEEEcCCH--HHHHHHHHHHHHCCC-eEEECchhh
Confidence             7999998873  345668888877776 577777654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.90  E-value=0.0014  Score=58.38  Aligned_cols=103  Identities=14%  Similarity=0.121  Sum_probs=63.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc---------CCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS---------AGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~---------~~v~~v~~D~~~l  144 (250)
                      .++|.|+    | .|.+|..++..|+..|++|++.++.++..+...+.-...+..+..         ..++.    ..++
T Consensus         7 i~~VaVI----G-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~----~~~l   77 (321)
T PRK07066          7 IKTFAAI----G-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF----VATI   77 (321)
T ss_pred             CCEEEEE----C-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee----cCCH
Confidence            4689999    5 699999999999999999999999875433211000000000000         11111    2245


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~iSS  187 (250)
                      ++++.+  .|.|+.+..-+.+.-+.+...+.+. ....+|-.||
T Consensus        78 ~~av~~--aDlViEavpE~l~vK~~lf~~l~~~~~~~aIlaSnT  119 (321)
T PRK07066         78 EACVAD--ADFIQESAPEREALKLELHERISRAAKPDAIIASST  119 (321)
T ss_pred             HHHhcC--CCEEEECCcCCHHHHHHHHHHHHHhCCCCeEEEECC
Confidence            566666  6999999888887777776555542 3334444444

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.87  E-value=0.0082  Score=52.95  Aligned_cols=98  Identities=14%  Similarity=0.111  Sum_probs=63.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CCHHHHH---hh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDPAEVG---NV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D~~~l~---~~  147 (250)
                      .+.+|||+    ||+|.+|..+++.+...|.+|+++++++++.+.+.           ..++. ++. .+.+.+.   +.
T Consensus       138 ~g~~VLI~----ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~~  202 (325)
T TIGR02825       138 GGETVMVN----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-----------KLGFDVAFNYKTVKSLEETLKK  202 (325)
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeccccccHHHHHHH
Confidence            45799999    99999999999988889999999988775544321           11222 221 1112222   22


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|+|+++.|..  .....++.++..  ++||.++...
T Consensus       203 ~~~~gvdvv~d~~G~~--~~~~~~~~l~~~--G~iv~~G~~~  240 (325)
T TIGR02825       203 ASPDGYDCYFDNVGGE--FSNTVIGQMKKF--GRIAICGAIS  240 (325)
T ss_pred             hCCCCeEEEEECCCHH--HHHHHHHHhCcC--cEEEEecchh
Confidence            2333589999998842  345566666553  4788877643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.86  E-value=0.0041  Score=59.52  Aligned_cols=92  Identities=15%  Similarity=0.184  Sum_probs=61.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +.+|+|.     |.|.+|+.++++|.++|++|++++.+++..+.+           ...+..++.+|   ++.++++ +-
T Consensus       417 ~~hiiI~-----G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-----------~~~g~~~i~GD~~~~~~L~~a-~i  479 (558)
T PRK10669        417 CNHALLV-----GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-----------RERGIRAVLGNAANEEIMQLA-HL  479 (558)
T ss_pred             CCCEEEE-----CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-----------HHCCCeEEEcCCCCHHHHHhc-Cc
Confidence            4688999     589999999999999999999999988665533           33467888888   4444433 22


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFL  183 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v  183 (250)
                      .+.|+|+-+.+.+. ...+++..+++ .+..++|
T Consensus       480 ~~a~~viv~~~~~~-~~~~iv~~~~~~~~~~~ii  512 (558)
T PRK10669        480 DCARWLLLTIPNGY-EAGEIVASAREKRPDIEII  512 (558)
T ss_pred             cccCEEEEEcCChH-HHHHHHHHHHHHCCCCeEE
Confidence            34787776554333 23345555555 3344554

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.85  E-value=0.014  Score=52.99  Aligned_cols=111  Identities=15%  Similarity=0.247  Sum_probs=67.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--  135 (250)
                      +..+|+|+     |.|.+|..+++.|+..| .++++++.+.=...++..+-.....+              ...++++  
T Consensus        40 ~~~~Vlii-----G~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~  114 (370)
T PRK05600         40 HNARVLVI-----GAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVN  114 (370)
T ss_pred             cCCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeE
Confidence            45789999     57999999999999999 58999987642222222111110000              0123333  


Q ss_pred             EEe--CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          136 TVW--GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       136 ~v~--~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+.  .+.+.+.+.+++  +|+||++... ...-..+-++|.+.++ .+|+.+..+.+|
T Consensus       115 ~~~~~i~~~~~~~~~~~--~DlVid~~Dn-~~~r~~in~~~~~~~i-P~v~~~~~g~~G  169 (370)
T PRK05600        115 ALRERLTAENAVELLNG--VDLVLDGSDS-FATKFLVADAAEITGT-PLVWGTVLRFHG  169 (370)
T ss_pred             EeeeecCHHHHHHHHhC--CCEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEEEecCEE
Confidence            222  236677778877  7999999763 4444444566777775 467666544443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.83  E-value=0.031  Score=46.34  Aligned_cols=112  Identities=15%  Similarity=0.134  Sum_probs=64.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcC---CCccccCC--CCCCCccc-----c---hhcCCce--E
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVG---DENSDKMK--KPPFNRFN-----E---IVSAGGK--T  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~---~~~~~~~~--~~~~~~~~-----~---~~~~~v~--~  136 (250)
                      +.++|+|+    | .|.+|..+++.|+..|. +|++++++   .+.+....  .....+.+     .   ...+.++  .
T Consensus        20 ~~~~V~Iv----G-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~   94 (200)
T TIGR02354        20 EQATVAIC----G-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEA   94 (200)
T ss_pred             hCCcEEEE----C-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            46799999    5 68999999999999997 69999987   33222110  00000000     0   0122233  2


Q ss_pred             Ee--CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEEEcCccccc
Q 025587          137 VW--GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFISSAGIYK  192 (250)
Q Consensus       137 v~--~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~iSS~~vy~  192 (250)
                      +.  .+.+.+.+.+.+  +|+||++ .-|...-..+.+.+.+ .+.+.++..+..+-|+
T Consensus        95 ~~~~i~~~~~~~~~~~--~DlVi~a-~Dn~~~k~~l~~~~~~~~~~~~ii~~~g~~g~~  150 (200)
T TIGR02354        95 YDEKITEENIDKFFKD--ADIVCEA-FDNAEAKAMLVNAVLEKYKDKYLIAASGLAGYD  150 (200)
T ss_pred             eeeeCCHhHHHHHhcC--CCEEEEC-CCCHHHHHHHHHHHHHHcCCCcEEEEeccccCC
Confidence            22  236777777776  7999999 3344444445555544 4444455544333333

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.83  E-value=0.00078  Score=54.94  Aligned_cols=100  Identities=19%  Similarity=0.216  Sum_probs=58.4

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-------------cCCceEEeCCHH
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-------------SAGGKTVWGDPA  142 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-------------~~~v~~v~~D~~  142 (250)
                      +|.|+    |+ |.+|+.++..++..|++|++++++++..+...+.-...+....             ...+ .+..|  
T Consensus         1 ~V~Vi----Ga-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i-~~~~d--   72 (180)
T PF02737_consen    1 KVAVI----GA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARI-SFTTD--   72 (180)
T ss_dssp             EEEEE----S--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTE-EEESS--
T ss_pred             CEEEE----cC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhc-ccccC--
Confidence            58899    65 9999999999999999999999987654322110000000000             0011 11222  


Q ss_pred             HHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       +.++. +  .|.||.+..-+.+..+.++....+.-...-|+.|.
T Consensus        73 -l~~~~-~--adlViEai~E~l~~K~~~~~~l~~~~~~~~ilasn  113 (180)
T PF02737_consen   73 -LEEAV-D--ADLVIEAIPEDLELKQELFAELDEICPPDTILASN  113 (180)
T ss_dssp             -GGGGC-T--ESEEEE-S-SSHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred             -HHHHh-h--hheehhhccccHHHHHHHHHHHHHHhCCCceEEec
Confidence             23333 3  79999999989999999888887743333344443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.82  E-value=0.0066  Score=54.65  Aligned_cols=102  Identities=18%  Similarity=0.117  Sum_probs=60.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|.|+    ||||++|..+++.|.+. +++++.+ ++....-+.+... +..+...  .+..+...|.   .+++.+  
T Consensus         1 ~kVaIi----GATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~-~~~l~~~--~~~~~~~~~~---~~~~~~--   68 (346)
T TIGR01850         1 IKVAIV----GASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEV-HPHLRGL--VDLNLEPIDE---EEIAED--   68 (346)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHh-Ccccccc--CCceeecCCH---HHhhcC--
Confidence            479999    99999999999999987 6788854 5433211111100 0000000  0112222233   333333  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                      +|+||-+.+..  ....++..+.+.| +++|=+|+..=.
T Consensus        69 ~DvVf~alP~~--~s~~~~~~~~~~G-~~VIDlS~~fR~  104 (346)
T TIGR01850        69 ADVVFLALPHG--VSAELAPELLAAG-VKVIDLSADFRL  104 (346)
T ss_pred             CCEEEECCCch--HHHHHHHHHHhCC-CEEEeCChhhhc
Confidence            79999988733  5667777776767 588988886533

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.82  E-value=0.0093  Score=52.36  Aligned_cols=99  Identities=15%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|||.    ||+|.+|..+++.+...|.+|+++++++++.+.+.+           .++. ++..+    .+.+.+.
T Consensus       143 ~g~~vlI~----ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-----------~Ga~~vi~~~~~~~~~~v~~~  207 (329)
T cd08294         143 AGETVVVN----GAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-----------LGFDAVFNYKTVSLEEALKEA  207 (329)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCEEEeCCCccHHHHHHHH
Confidence            45799999    999999999999999999999999887755443221           1222 22222    2333333


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                      .. ..+|+|+++.|.  ......++.++..  ++|+.++....+
T Consensus       208 ~~-~gvd~vld~~g~--~~~~~~~~~l~~~--G~iv~~g~~~~~  246 (329)
T cd08294         208 AP-DGIDCYFDNVGG--EFSSTVLSHMNDF--GRVAVCGSISTY  246 (329)
T ss_pred             CC-CCcEEEEECCCH--HHHHHHHHhhccC--CEEEEEcchhcc
Confidence            32 358999999884  3445555555443  578888764433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.81  E-value=0.0043  Score=55.84  Aligned_cols=80  Identities=25%  Similarity=0.298  Sum_probs=52.1

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc-
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG-  149 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~-  149 (250)
                      ...++.|||.    ||+|.+|.+.++-+...|..+++.+++.++.+-.++         .+.+-.+++.|++-++...+ 
T Consensus       155 ~~~g~~vLv~----ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~---------lGAd~vvdy~~~~~~e~~kk~  221 (347)
T KOG1198|consen  155 LSKGKSVLVL----GGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK---------LGADEVVDYKDENVVELIKKY  221 (347)
T ss_pred             cCCCCeEEEE----eCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH---------cCCcEeecCCCHHHHHHHHhh
Confidence            3456799999    999999999999998889555566666655442211         12222233444333333333 


Q ss_pred             -CCcccEEEeCCCcC
Q 025587          150 -GVTFDVVLDNNGKN  163 (250)
Q Consensus       150 -~~~~d~Vi~~ag~~  163 (250)
                       +..+|+|+||.|-.
T Consensus       222 ~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  222 TGKGVDVVLDCVGGS  236 (347)
T ss_pred             cCCCccEEEECCCCC
Confidence             44699999999853

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.81  E-value=0.015  Score=50.90  Aligned_cols=112  Identities=19%  Similarity=0.292  Sum_probs=70.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~v  137 (250)
                      ...+|||+     |.|.+|..+++.|+..| .+|+++|...-...++..+-+-+..+              ...+.+++.
T Consensus        18 ~~s~VLIv-----G~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~   92 (286)
T cd01491          18 QKSNVLIS-----GLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVT   92 (286)
T ss_pred             hcCcEEEE-----cCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEE
Confidence            35689999     57999999999999999 56888886652222222211111000              112334433


Q ss_pred             eCCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          138 WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       138 ~~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ..+.....+.+.+  +|+||.+.. +......+-++|++.++ .||...+.+.+|.
T Consensus        93 ~~~~~~~~~~l~~--fdvVV~~~~-~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~  144 (286)
T cd01491          93 VSTGPLTTDELLK--FQVVVLTDA-SLEDQLKINEFCHSPGI-KFISADTRGLFGS  144 (286)
T ss_pred             EEeccCCHHHHhc--CCEEEEecC-CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence            2221111234444  799998865 67777778888988876 7888888877774

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.80  E-value=0.0076  Score=53.50  Aligned_cols=97  Identities=16%  Similarity=0.120  Sum_probs=63.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-C---C-HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-G---D-PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~---D-~~~l~~  146 (250)
                      .+.+|||+    ||+|.+|..+++.+...|.+|+++++++++.+.+++.          .++. ++. .   | .+.+.+
T Consensus       151 ~g~~VlI~----Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~----------lGa~~vi~~~~~~~~~~~i~~  216 (338)
T cd08295         151 KGETVFVS----AASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK----------LGFDDAFNYKEEPDLDAALKR  216 (338)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh----------cCCceeEEcCCcccHHHHHHH
Confidence            46799999    9999999999998889999999998887554432110          1222 222 1   2 222333


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ... ..+|+|+++.|.  ......++.++..  ++|+.++..
T Consensus       217 ~~~-~gvd~v~d~~g~--~~~~~~~~~l~~~--G~iv~~G~~  253 (338)
T cd08295         217 YFP-NGIDIYFDNVGG--KMLDAVLLNMNLH--GRIAACGMI  253 (338)
T ss_pred             hCC-CCcEEEEECCCH--HHHHHHHHHhccC--cEEEEeccc
Confidence            332 358999999884  4455666666553  478877753

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.79  E-value=0.012  Score=51.55  Aligned_cols=97  Identities=18%  Similarity=0.166  Sum_probs=61.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc-CC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG-GV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~-~~  151 (250)
                      ...+|||+    ||+|.+|.++++.+...|.+|++++++++..+.+.           ..+...+....+ +.+.+. ..
T Consensus       162 ~~~~vlI~----ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~  225 (332)
T cd08259         162 KGDTVLVT----GAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-----------ELGADYVIDGSK-FSEDVKKLG  225 (332)
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-----------HcCCcEEEecHH-HHHHHHhcc
Confidence            45789999    99999999999999999999999998765433221           112222111111 222221 11


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+|.|++++|...  ....++.+..  ..++|.++...
T Consensus       226 ~~d~v~~~~g~~~--~~~~~~~~~~--~g~~v~~g~~~  259 (332)
T cd08259         226 GADVVIELVGSPT--IEESLRSLNK--GGRLVLIGNVT  259 (332)
T ss_pred             CCCEEEECCChHH--HHHHHHHhhc--CCEEEEEcCCC
Confidence            4899999988432  4444555543  34788887643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=96.78  E-value=0.0045  Score=58.16  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=70.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC----------CCCcccchhc----CCce-EEe
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP----------PFNRFNEIVS----AGGK-TVW  138 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~----------~~~~~~~~~~----~~v~-~v~  138 (250)
                      ..+|-++     |.|-+|..+++.|+++||+|++.+|..++.+.+.+.          ......++..    .++. +..
T Consensus         6 ~~~IG~I-----GLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v   80 (493)
T PLN02350          6 LSRIGLA-----GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILV   80 (493)
T ss_pred             CCCEEEE-----eeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEEC
Confidence            4579999     699999999999999999999999987665543221          1112222221    3433 223


Q ss_pred             CCHHHHHhh----hcC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          139 GDPAEVGNV----VGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       139 ~D~~~l~~~----l~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .|.+.++++    +.. .+=|+||++...++..+..+.+.+++.|+ +||
T Consensus        81 ~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi-~fl  129 (493)
T PLN02350         81 KAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGL-LYL  129 (493)
T ss_pred             CCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            343333333    222 12489999998999999999999988877 555

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.78  E-value=0.011  Score=44.12  Aligned_cols=90  Identities=21%  Similarity=0.293  Sum_probs=61.7

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCCcc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGVTF  153 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~~~  153 (250)
                      |+|.    | .|.+|+.+++.|.+.+.+|++++++++..+.           +...++.++.+|   ++.+.++ .-.+.
T Consensus         1 vvI~----G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~-----------~~~~~~~~i~gd~~~~~~l~~a-~i~~a   63 (116)
T PF02254_consen    1 VVII----G-YGRIGREIAEQLKEGGIDVVVIDRDPERVEE-----------LREEGVEVIYGDATDPEVLERA-GIEKA   63 (116)
T ss_dssp             EEEE----S--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH-----------HHHTTSEEEES-TTSHHHHHHT-TGGCE
T ss_pred             eEEE----c-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHH-----------HHhcccccccccchhhhHHhhc-Ccccc
Confidence            6788    5 6899999999999977899999998865543           344567888898   4555554 22347


Q ss_pred             cEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEE
Q 025587          154 DVVLDNNGKNLDAVRPVADWAKS-SGVKQFLF  184 (250)
Q Consensus       154 d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~  184 (250)
                      +.|+-+... -.....++..+++ .+..+++.
T Consensus        64 ~~vv~~~~~-d~~n~~~~~~~r~~~~~~~ii~   94 (116)
T PF02254_consen   64 DAVVILTDD-DEENLLIALLARELNPDIRIIA   94 (116)
T ss_dssp             SEEEEESSS-HHHHHHHHHHHHHHTTTSEEEE
T ss_pred             CEEEEccCC-HHHHHHHHHHHHHHCCCCeEEE
Confidence            888877663 3555566667777 44456554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.76  E-value=0.0077  Score=53.50  Aligned_cols=101  Identities=24%  Similarity=0.343  Sum_probs=64.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .++||.|+    |+ |.+|..++..|+..|.  ++++++++++..+.....- .....+. ..+.+..+|.++    +++
T Consensus         5 ~~~ki~ii----Ga-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl-~~~~~~~-~~~~i~~~~~~~----~~~   73 (315)
T PRK00066          5 QHNKVVLV----GD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDL-SHAVPFT-SPTKIYAGDYSD----CKD   73 (315)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHH-Hhhcccc-CCeEEEeCCHHH----hCC
Confidence            34699999    87 9999999999999985  8999999776543321110 0000011 133343344443    455


Q ss_pred             CcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCE-EEEEc
Q 025587          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~-~v~iS  186 (250)
                        .|+||-++|.              |....+.+++.+++.+.+- +|.+|
T Consensus        74 --adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         74 --ADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             --CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence              5999999993              5556777787777765443 44444

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.76  E-value=0.017  Score=48.31  Aligned_cols=112  Identities=15%  Similarity=0.181  Sum_probs=68.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCC-------ccc------chhcCCceE--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN-------RFN------EIVSAGGKT--  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~-------~~~------~~~~~~v~~--  136 (250)
                      ...+|+|+    | .|.+|..+++.|...|. +++++|.+.-...++..+.+.       +..      ....+++++  
T Consensus        27 ~~~~V~Vi----G-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~  101 (212)
T PRK08644         27 KKAKVGIA----G-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEA  101 (212)
T ss_pred             hCCCEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            45789999    5 79999999999999995 599998864222222211110       000      001223332  


Q ss_pred             Ee--CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEEEcCcccccC
Q 025587          137 VW--GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (250)
Q Consensus       137 v~--~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~  193 (250)
                      +.  .+.+++.+.+.+  +|+||++.. +......+.+.+.+. ++ .+|+.+..+-|+.
T Consensus       102 ~~~~i~~~~~~~~~~~--~DvVI~a~D-~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~  157 (212)
T PRK08644        102 HNEKIDEDNIEELFKD--CDIVVEAFD-NAETKAMLVETVLEHPGK-KLVAASGMAGYGD  157 (212)
T ss_pred             EeeecCHHHHHHHHcC--CCEEEECCC-CHHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence            21  235566677776  799999954 455556677888886 64 6777665554544

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.73  E-value=0.019  Score=52.18  Aligned_cols=111  Identities=14%  Similarity=0.192  Sum_probs=67.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCccc-----------c-h--hcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFN-----------E-I--VSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~-----------~-~--~~~~v~~-  136 (250)
                      +.++|+|+    | .|.+|.++++.|+..|. ++++++++.-...++..+.+....           + +  ..+.+++ 
T Consensus       134 ~~~~Vlvv----G-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  208 (376)
T PRK08762        134 LEARVLLI----G-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVE  208 (376)
T ss_pred             hcCcEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEE
Confidence            46789999    5 68999999999999995 788888864222222211110000           0 1  1223332 


Q ss_pred             -EeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          137 -VWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       137 -v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                       +..  +.+.+.+.+.+  +|+||++... ...-..+-++|++.++ .+|+.+..+.+|
T Consensus       209 ~~~~~~~~~~~~~~~~~--~D~Vv~~~d~-~~~r~~ln~~~~~~~i-p~i~~~~~g~~g  263 (376)
T PRK08762        209 AVQERVTSDNVEALLQD--VDVVVDGADN-FPTRYLLNDACVKLGK-PLVYGAVFRFEG  263 (376)
T ss_pred             EEeccCChHHHHHHHhC--CCEEEECCCC-HHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence             221  35566677776  7999999763 3333446677888776 677776554443

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.72  E-value=0.006  Score=57.11  Aligned_cols=104  Identities=15%  Similarity=0.251  Sum_probs=68.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC---------CCCcccchhc----CCceE-EeCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP---------PFNRFNEIVS----AGGKT-VWGD  140 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~---------~~~~~~~~~~----~~v~~-v~~D  140 (250)
                      .+|-|+     |.|-+|..+++.|+++||+|++.+|+++..+.+.+.         ....+.++..    .++.+ ...+
T Consensus         2 ~~IgvI-----GLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~   76 (470)
T PTZ00142          2 SDIGLI-----GLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKA   76 (470)
T ss_pred             CEEEEE-----eEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCC
Confidence            478999     689999999999999999999999988765443221         1222222221    33232 2234


Q ss_pred             HHHHHhhh----cC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          141 PAEVGNVV----GG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       141 ~~~l~~~l----~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .+.+++++    .. ..=|+||++...+...+....+.+++.|+ +||=
T Consensus        77 ~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi-~fld  124 (470)
T PTZ00142         77 GEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGI-LYLG  124 (470)
T ss_pred             hHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEEc
Confidence            33332222    11 12378999988888999999999988877 5553

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=96.71  E-value=0.022  Score=51.19  Aligned_cols=96  Identities=17%  Similarity=0.111  Sum_probs=56.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCe---EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l  148 (250)
                      .++++|.|+    ||||++|..|++.|.+++|.   +..+......-+.+        .. ...++.+...|.+    .+
T Consensus         5 ~~~~kVaVv----GAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~--------~~-~~~~~~v~~~~~~----~~   67 (344)
T PLN02383          5 ENGPSVAIV----GVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKV--------TF-EGRDYTVEELTED----SF   67 (344)
T ss_pred             CCCCeEEEE----cCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCee--------ee-cCceeEEEeCCHH----HH
Confidence            345799999    99999999999999998874   44443322111110        00 1112222222333    23


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+  +|+||-+++..  ....++..+.+.|. ++|=.|+..
T Consensus        68 ~~--~D~vf~a~p~~--~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         68 DG--VDIALFSAGGS--ISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             cC--CCEEEECCCcH--HHHHHHHHHHhCCC-EEEECCchh
Confidence            44  79999988754  45555555655564 677777654

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.69  E-value=0.019  Score=50.22  Aligned_cols=100  Identities=24%  Similarity=0.300  Sum_probs=71.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCccc----chhcCCce-EEeCCHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFN----EIVSAGGK-TVWGDPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~----~~~~~~v~-~v~~D~~~l~~~l  148 (250)
                      ++|-++     |.|-+|..++++|+++||+|++.+|++++. +.+....-....    .....++- +...|.+++..++
T Consensus         1 ~kIafI-----GLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~   75 (286)
T COG2084           1 MKIAFI-----GLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVL   75 (286)
T ss_pred             CeEEEE-----cCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHH
Confidence            468888     699999999999999999999999998773 222221111111    11233333 4456788888887


Q ss_pred             cC---C-----cccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          149 GG---V-----TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       149 ~~---~-----~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                      -+   .     +=.++|++..+..+.++.+.+.+++.|.
T Consensus        76 ~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~  114 (286)
T COG2084          76 FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGL  114 (286)
T ss_pred             hCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            43   1     2358889999999999999999999876

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.69  E-value=0.0063  Score=61.78  Aligned_cols=73  Identities=18%  Similarity=0.127  Sum_probs=51.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCe-------------EEEEEcCCCccccCCCCCCCcccchhcCC---ce
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHE-------------VTIMTVGDENSDKMKKPPFNRFNEIVSAG---GK  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~-------------V~~l~R~~~~~~~~~~~~~~~~~~~~~~~---v~  135 (250)
                      .+++|+|+    | .|++|+.+++.|.+. +++             |++.++..+..+.+.+.       .  .+   +.
T Consensus       568 ~~~rIlVL----G-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-------~--~~~~~v~  633 (1042)
T PLN02819        568 KSQNVLIL----G-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-------I--ENAEAVQ  633 (1042)
T ss_pred             cCCcEEEE----C-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-------c--CCCceEE
Confidence            46799999    6 599999999999875 344             77777776554433221       0  13   33


Q ss_pred             EEeCCHHHHHhhhcCCcccEEEeCCC
Q 025587          136 TVWGDPAEVGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus       136 ~v~~D~~~l~~~l~~~~~d~Vi~~ag  161 (250)
                      ++..|.+++.+++++  +|+||.+..
T Consensus       634 lDv~D~e~L~~~v~~--~DaVIsalP  657 (1042)
T PLN02819        634 LDVSDSESLLKYVSQ--VDVVISLLP  657 (1042)
T ss_pred             eecCCHHHHHHhhcC--CCEEEECCC
Confidence            445578888888777  799999987

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.69  E-value=0.012  Score=52.39  Aligned_cols=102  Identities=12%  Similarity=0.118  Sum_probs=62.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l  144 (250)
                      +.+|.|+    |++|.+|..++..|+..|.       ++++++..+  +........ ..........+..+..+|.++ 
T Consensus         3 p~KV~II----Ga~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~D-l~~~~~~~~~~~~i~~~~~~~-   76 (323)
T TIGR01759         3 PVRVAVT----GAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAME-LEDCAFPLLAGVVATTDPEEA-   76 (323)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHH-HhhccccccCCcEEecChHHH-
Confidence            4689999    9999999999999998873       799999865  222221100 000000001123222233433 


Q ss_pred             HhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCC-C-EEEEEc
Q 025587          145 GNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGV-K-QFLFIS  186 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~-~-~~v~iS  186 (250)
                         +++  .|+||.+||              .|....+.+.+.+++.+. . .+|.+|
T Consensus        77 ---~~d--aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        77 ---FKD--VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             ---hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence               444  599999999              356678888888888654 4 444444

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.65  E-value=0.0074  Score=53.10  Aligned_cols=104  Identities=16%  Similarity=0.184  Sum_probs=62.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccch----hcCCceEEeCCHHHHHhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEI----VSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~~----~~~~v~~v~~D~~~l~~~  147 (250)
                      |+|-|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+....   ...++    ...++-++......+.++
T Consensus         1 M~Ig~I----G-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v   75 (298)
T TIGR00872         1 MQLGLI----G-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAV   75 (298)
T ss_pred             CEEEEE----c-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHH
Confidence            479999    5 79999999999999999999999987665544322111   11111    112333222221122222


Q ss_pred             ----hcCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          148 ----VGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       148 ----l~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                          .... .=++||++.......+..+.+.+++.|+ +|+=
T Consensus        76 ~~~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~-~~vd  116 (298)
T TIGR00872        76 LEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGI-HLLD  116 (298)
T ss_pred             HHHHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCC-eEEe
Confidence                2111 1267888877777778887777777665 4443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.64  E-value=0.0023  Score=50.27  Aligned_cols=74  Identities=19%  Similarity=0.252  Sum_probs=48.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +.++|+|+    |+ |.+|..+++.|.+.| ++|++++|+.+..+.+.+.       +....+.....|   ..+++++ 
T Consensus        18 ~~~~i~ii----G~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~-   81 (155)
T cd01065          18 KGKKVLIL----GA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAER-------FGELGIAIAYLD---LEELLAE-   81 (155)
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH-------Hhhcccceeecc---hhhcccc-
Confidence            45799999    76 999999999999996 8899999987654432211       000001122223   3333444 


Q ss_pred             cccEEEeCCCcC
Q 025587          152 TFDVVLDNNGKN  163 (250)
Q Consensus       152 ~~d~Vi~~ag~~  163 (250)
                       .|+||.+....
T Consensus        82 -~Dvvi~~~~~~   92 (155)
T cd01065          82 -ADLIINTTPVG   92 (155)
T ss_pred             -CCEEEeCcCCC
Confidence             79999987743

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.63  E-value=0.008  Score=52.94  Aligned_cols=103  Identities=17%  Similarity=0.211  Sum_probs=64.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccchhc----CCceEE-eCCHHHHHh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVS----AGGKTV-WGDPAEVGN  146 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~~~~----~~v~~v-~~D~~~l~~  146 (250)
                      |+|.|+     |.|-+|..+++.|++.|++|++.+|+++..+.+.+....   ...++..    .++.++ .-+.+.+.+
T Consensus         1 m~Ig~I-----GlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~   75 (301)
T PRK09599          1 MQLGMI-----GLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDA   75 (301)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHH
Confidence            479999     589999999999999999999999987655443222111   1111211    233222 222212222


Q ss_pred             ----hhcCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          147 ----VVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       147 ----~l~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                          +.... .-++||++.......++.+.+.+++.|+ +||
T Consensus        76 v~~~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~~  116 (301)
T PRK09599         76 TIDELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGI-HFV  116 (301)
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCC-EEE
Confidence                22211 1367889888888888888888888776 454

>PRK07411 hypothetical protein; Validated

Probab=96.61  E-value=0.026  Score=51.63  Aligned_cols=111  Identities=15%  Similarity=0.127  Sum_probs=67.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--  135 (250)
                      ...+|+|+     |.|.+|..+++.|+..| -+++++|.+.=...++..+-+....+              ...++++  
T Consensus        37 ~~~~Vliv-----G~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~  111 (390)
T PRK07411         37 KAASVLCI-----GTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVD  111 (390)
T ss_pred             hcCcEEEE-----CCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEE
Confidence            45799999     57999999999999999 56888876542333332221111111              1123333  


Q ss_pred             EEeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       136 ~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+..  +.+...+.+.+  +|+||++.. +...-..+-++|.+.++ .+|+.+..+.||
T Consensus       112 ~~~~~~~~~~~~~~~~~--~D~Vvd~~d-~~~~r~~ln~~~~~~~~-p~v~~~~~g~~g  166 (390)
T PRK07411        112 LYETRLSSENALDILAP--YDVVVDGTD-NFPTRYLVNDACVLLNK-PNVYGSIFRFEG  166 (390)
T ss_pred             EEecccCHHhHHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEEEccCEE
Confidence            2222  25566677776  799999976 33333344466777664 677766655554

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.59  E-value=0.02  Score=50.05  Aligned_cols=96  Identities=16%  Similarity=0.177  Sum_probs=65.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|||.    ||+|.+|..+++.+...|.+|+++++..+..+.+.+           .++. ++..+    .+.+.+.
T Consensus       139 ~g~~vlI~----g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~i~~~  203 (324)
T cd08292         139 PGQWLIQN----AAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-----------LGIGPVVSTEQPGWQDKVREA  203 (324)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-----------cCCCEEEcCCCchHHHHHHHH
Confidence            45799999    999999999999999999999999887755443221           1222 22222    3445555


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ..+..+|+|+++.|..  .....++.++.  .++||.++.
T Consensus       204 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~--~g~~v~~g~  239 (324)
T cd08292         204 AGGAPISVALDSVGGK--LAGELLSLLGE--GGTLVSFGS  239 (324)
T ss_pred             hCCCCCcEEEECCCCh--hHHHHHHhhcC--CcEEEEEec
Confidence            5555699999998853  23445555544  357888764

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.57  E-value=0.012  Score=51.90  Aligned_cols=92  Identities=20%  Similarity=0.276  Sum_probs=60.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      .+++|+|+    | .|.+|+.+++.|.+.|.+|++++|+.+....           ....+.+.+  +.+++.+.+++  
T Consensus       151 ~g~kvlVi----G-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-----------~~~~G~~~~--~~~~l~~~l~~--  210 (296)
T PRK08306        151 HGSNVLVL----G-FGRTGMTLARTLKALGANVTVGARKSAHLAR-----------ITEMGLSPF--HLSELAEEVGK--  210 (296)
T ss_pred             CCCEEEEE----C-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----------HHHcCCeee--cHHHHHHHhCC--
Confidence            46899999    6 5889999999999999999999998643221           111233322  44566777776  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||++....+ .....++.+++ + ..+|-+++
T Consensus       211 aDiVI~t~p~~~-i~~~~l~~~~~-g-~vIIDla~  242 (296)
T PRK08306        211 IDIIFNTIPALV-LTKEVLSKMPP-E-ALIIDLAS  242 (296)
T ss_pred             CCEEEECCChhh-hhHHHHHcCCC-C-cEEEEEcc
Confidence            699999876322 23344444443 2 24555655

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.56  E-value=0.023  Score=49.69  Aligned_cols=101  Identities=15%  Similarity=0.115  Sum_probs=65.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+.+|+|+    |+++.+|..+++.+...|++|++++++++..+.+...         .....+...+   .+.+.+...
T Consensus       166 ~~~~vlI~----g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         166 PGETVLVH----GAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL---------GADYVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc---------CCCeEEecCChHHHHHHHHHhC
Confidence            35789999    9999999999999999999999998876543322110         0011111222   233334444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      +..+|.+++++|.  ......++.++..  ++++.+++...
T Consensus       233 ~~~~d~~i~~~g~--~~~~~~~~~l~~~--G~~v~~~~~~~  269 (342)
T cd08266         233 KRGVDVVVEHVGA--ATWEKSLKSLARG--GRLVTCGATTG  269 (342)
T ss_pred             CCCCcEEEECCcH--HHHHHHHHHhhcC--CEEEEEecCCC
Confidence            4468999999984  2344555666543  58998887543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.54  E-value=0.023  Score=48.78  Aligned_cols=90  Identities=21%  Similarity=0.314  Sum_probs=57.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~~  151 (250)
                      |+|||.    |||+ =|+.|++.|.++|+ |.+-+-..-..+.. .+        ....+.+..+   |.+.+.+.++..
T Consensus         1 m~ILvl----gGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~-~~--------~~~~~~v~~G~lg~~~~l~~~l~~~   65 (249)
T PF02571_consen    1 MKILVL----GGTT-EGRKLAERLAEAGY-VIVSVATSYGGELL-KP--------ELPGLEVRVGRLGDEEGLAEFLREN   65 (249)
T ss_pred             CEEEEE----echH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhh-cc--------ccCCceEEECCCCCHHHHHHHHHhC
Confidence            689999    9886 59999999999998 55433222111100 00        0112333332   789999999888


Q ss_pred             cccEEEeCCC-cCHHhHHHHHHHHHhCCC
Q 025587          152 TFDVVLDNNG-KNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       152 ~~d~Vi~~ag-~~~~~~~~ll~~~~~~~~  179 (250)
                      .++.|||..- ...+.+.++.++|++.|+
T Consensus        66 ~i~~vIDATHPfA~~is~na~~a~~~~~i   94 (249)
T PF02571_consen   66 GIDAVIDATHPFAAEISQNAIEACRELGI   94 (249)
T ss_pred             CCcEEEECCCchHHHHHHHHHHHHhhcCc
Confidence            8999998865 223445555555555444

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.53  E-value=0.012  Score=52.16  Aligned_cols=96  Identities=15%  Similarity=0.156  Sum_probs=62.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~l  148 (250)
                      .+|||.    ||+|.+|..+++.+...|. +|+++++++++.+.+.+          ..++. ++..+    .+.+.++.
T Consensus       156 ~~VlI~----ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~----------~lGa~~vi~~~~~~~~~~i~~~~  221 (345)
T cd08293         156 QTMVVS----GAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS----------ELGFDAAINYKTDNVAERLRELC  221 (345)
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----------hcCCcEEEECCCCCHHHHHHHHC
Confidence            799999    9999999999998888998 79999887754432211          01222 22221    23344433


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      . ..+|+|+++.|..  .....++.++..  ++||.++...
T Consensus       222 ~-~gvd~vid~~g~~--~~~~~~~~l~~~--G~iv~~G~~~  257 (345)
T cd08293         222 P-EGVDVYFDNVGGE--ISDTVISQMNEN--SHIILCGQIS  257 (345)
T ss_pred             C-CCceEEEECCCcH--HHHHHHHHhccC--CEEEEEeeee
Confidence            2 3589999998853  234556666543  4788877543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.52  E-value=0.014  Score=54.57  Aligned_cols=72  Identities=21%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             ccCcEEEEEecCCCc----------------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce
Q 025587           72 AEKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK  135 (250)
Q Consensus        72 ~~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~  135 (250)
                      -.+++||||    +|                +|.+|.+|++.+..+|++|+++.-.-. ..             ...+++
T Consensus       254 l~gkkvLIT----aGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~-------------~p~~v~  315 (475)
T PRK13982        254 LAGRRVLIT----AGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA-------------DPQGVK  315 (475)
T ss_pred             cCCCEEEEe----cCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC-------------CCCCce
Confidence            467899999    65                799999999999999999999973321 11             123455


Q ss_pred             EEeCC-HHHHHhhhc-CCcccEEEeCCC
Q 025587          136 TVWGD-PAEVGNVVG-GVTFDVVLDNNG  161 (250)
Q Consensus       136 ~v~~D-~~~l~~~l~-~~~~d~Vi~~ag  161 (250)
                      ++..+ .+++.+++. ..+.|++|++|+
T Consensus       316 ~i~V~ta~eM~~av~~~~~~Di~I~aAA  343 (475)
T PRK13982        316 VIHVESARQMLAAVEAALPADIAIFAAA  343 (475)
T ss_pred             EEEecCHHHHHHHHHhhCCCCEEEEecc
Confidence            55544 444444443 234699999998

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.52  E-value=0.025  Score=50.09  Aligned_cols=98  Identities=26%  Similarity=0.262  Sum_probs=63.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcC--CceEEeC-CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSA--GGKTVWG-DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~--~v~~v~~-D~~~l~~~l~  149 (250)
                      ++|.|+    |++|.+|..++..|+..|  .++++++.+  ..+...       .++...  ...+... ..+++.+.++
T Consensus         1 ~KI~II----GaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~a-------lDL~~~~~~~~i~~~~~~~~~y~~~~   67 (310)
T cd01337           1 VKVAVL----GAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVA-------ADLSHINTPAKVTGYLGPEELKKALK   67 (310)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceee-------hHhHhCCCcceEEEecCCCchHHhcC
Confidence            589999    999999999999999888  589999886  222110       011111  1222221 2233555666


Q ss_pred             CCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          150 GVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      +  .|+||-+||              .|....+.+++..++++.+ .+|.+|-
T Consensus        68 d--aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          68 G--ADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             C--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            6  599999999              3667788888888876644 4444443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.51  E-value=0.02  Score=49.62  Aligned_cols=97  Identities=24%  Similarity=0.283  Sum_probs=64.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      ...+|+|+    |++|.+|..+++.+...|.+|++++++.++.+.+...           ++. ++..+    .+.+.+.
T Consensus       144 ~~~~vli~----g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~  208 (328)
T cd08268         144 PGDSVLIT----AASSSVGLAAIQIANAAGATVIATTRTSEKRDALLAL-----------GAAHVIVTDEEDLVAEVLRI  208 (328)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHc-----------CCCEEEecCCccHHHHHHHH
Confidence            35689999    9999999999999999999999998876544322111           111 22222    3334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+..+|.++++.+.  ......++.++..  +++|.++..
T Consensus       209 ~~~~~~d~vi~~~~~--~~~~~~~~~l~~~--g~~v~~g~~  245 (328)
T cd08268         209 TGGKGVDVVFDPVGG--PQFAKLADALAPG--GTLVVYGAL  245 (328)
T ss_pred             hCCCCceEEEECCch--HhHHHHHHhhccC--CEEEEEEeC
Confidence            444468999999885  3455556655543  478877643

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.50  E-value=0.018  Score=50.47  Aligned_cols=95  Identities=17%  Similarity=0.154  Sum_probs=63.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE-EeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~D---~~~l~~~l~  149 (250)
                      ..+|||.    |++|.+|..+++.+...|.+|+++++++++.+.+.+           .++.. +..+   .+.+.+. .
T Consensus       147 ~~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~v~~~~~~~~~~~~~~-~  210 (326)
T cd08289         147 QGPVLVT----GATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-----------LGAKEVIPREELQEESIKPL-E  210 (326)
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-----------cCCCEEEcchhHHHHHHHhh-c
Confidence            4699999    999999999999999999999999988765443221           12221 1111   2233333 3


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|.|+++.|.  ......++.++.  .+++|.++..
T Consensus       211 ~~~~d~vld~~g~--~~~~~~~~~l~~--~G~~i~~g~~  245 (326)
T cd08289         211 KQRWAGAVDPVGG--KTLAYLLSTLQY--GGSVAVSGLT  245 (326)
T ss_pred             cCCcCEEEECCcH--HHHHHHHHHhhc--CCEEEEEeec
Confidence            3458999999884  344555666554  3478888754

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK05442 malate dehydrogenase; Provisional

Probab=96.50  E-value=0.02  Score=51.12  Aligned_cols=104  Identities=12%  Similarity=0.079  Sum_probs=62.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcCCC--ccccCCCCCCCcccchhcCCceEEeCCHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGDPAE  143 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~  143 (250)
                      .+++|.|+    |++|.+|..++..|+..|.       ++++++..++  ..+...-. ..........++.+..+|.++
T Consensus         3 ~~~KV~Ii----GaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~D-l~~~~~~~~~~~~i~~~~y~~   77 (326)
T PRK05442          3 APVRVAVT----GAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVME-LDDCAFPLLAGVVITDDPNVA   77 (326)
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehh-hhhhhhhhcCCcEEecChHHH
Confidence            35699999    9999999999999988763       7999998542  22221100 000000001123333333333


Q ss_pred             HHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC--CCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG--VKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~--~~~~v~iSS  187 (250)
                          +++  .|+||-+||              .|....+.+.+.++++.  -..+|.+|-
T Consensus        78 ----~~d--aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         78 ----FKD--ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ----hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                444  599999998              35666888888887733  345665553

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.49  E-value=0.0026  Score=53.39  Aligned_cols=39  Identities=26%  Similarity=0.352  Sum_probs=34.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      |+|.|+    ||+|.+|..+++.|++.||+|++.+|+++..+.
T Consensus         1 MkI~II----GG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~   39 (219)
T TIGR01915         1 MKIAVL----GGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEE   39 (219)
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHH
Confidence            579999    999999999999999999999999998766543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.48  E-value=0.023  Score=49.06  Aligned_cols=98  Identities=21%  Similarity=0.273  Sum_probs=62.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|+|+    |++|.+|..+++.+...|.+|++++++.+..+.+.+           .++. ++..+    .+.+.+.
T Consensus       139 ~~~~vlv~----g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  203 (323)
T cd05276         139 AGETVLIH----GGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-----------LGADVAINYRTEDFAEEVKEA  203 (323)
T ss_pred             CCCEEEEE----cCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-----------cCCCEEEeCCchhHHHHHHHH
Confidence            45799999    999999999999999999999999887644332211           1111 12212    2334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|.++++.|...  ....++.+...  ++++.++..+
T Consensus       204 ~~~~~~d~vi~~~g~~~--~~~~~~~~~~~--g~~i~~~~~~  241 (323)
T cd05276         204 TGGRGVDVILDMVGGDY--LARNLRALAPD--GRLVLIGLLG  241 (323)
T ss_pred             hCCCCeEEEEECCchHH--HHHHHHhhccC--CEEEEEecCC
Confidence            44445899999988432  33344444333  4788776543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.47  E-value=0.028  Score=50.27  Aligned_cols=97  Identities=20%  Similarity=0.228  Sum_probs=66.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ...++|+|+    |. |.+|..-++.+...|.+|++++|++++.+...+         ...+..+...|++.+.++-+. 
T Consensus       165 ~pG~~V~I~----G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~---------lGAd~~i~~~~~~~~~~~~~~-  229 (339)
T COG1064         165 KPGKWVAVV----GA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK---------LGADHVINSSDSDALEAVKEI-  229 (339)
T ss_pred             CCCCEEEEE----CC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH---------hCCcEEEEcCCchhhHHhHhh-
Confidence            346899999    65 599999999888899999999999976643211         122222333355555554433 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       +|++|++++  -......+++++..  ++++.++-.
T Consensus       230 -~d~ii~tv~--~~~~~~~l~~l~~~--G~~v~vG~~  261 (339)
T COG1064         230 -ADAIIDTVG--PATLEPSLKALRRG--GTLVLVGLP  261 (339)
T ss_pred             -CcEEEECCC--hhhHHHHHHHHhcC--CEEEEECCC
Confidence             899999998  44555666677664  468887754

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.47  E-value=0.037  Score=49.73  Aligned_cols=102  Identities=13%  Similarity=0.165  Sum_probs=56.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCcc-ccCCCC-CCCcccchhc--CCceEEeCCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKP-PFNRFNEIVS--AGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~-~~~~~~-~~~~~~~~~~--~~v~~v~~D~~~l~~~l~  149 (250)
                      ++|.|+    |++|++|++|++.|.+.+ .+|..+..+.... ..+... ++..+.....  .++.+...|++    .+.
T Consensus         1 ~kVaIv----GatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~   72 (341)
T TIGR00978         1 MRVAVL----GATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----ASK   72 (341)
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----Hhc
Confidence            479999    999999999999998876 6888875433221 111100 0000000100  11122222333    223


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +  +|+|+.+.+.++  ...+.+.+.+.|. ++|-.|+..
T Consensus        73 ~--~DvVf~a~p~~~--s~~~~~~~~~~G~-~VIDlsg~f  107 (341)
T TIGR00978        73 D--VDIVFSALPSEV--AEEVEPKLAEAGK-PVFSNASNH  107 (341)
T ss_pred             c--CCEEEEeCCHHH--HHHHHHHHHHCCC-EEEECChhh
Confidence            3  799999987553  3344466666676 566666643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.47  E-value=0.0028  Score=55.40  Aligned_cols=91  Identities=20%  Similarity=0.215  Sum_probs=57.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCC---CC------ccc-----chhcCCceEEeCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP---FN------RFN-----EIVSAGGKTVWGD  140 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~---~~------~~~-----~~~~~~v~~v~~D  140 (250)
                      ++|.|+    | .|.+|..++..|+..|++|++++++++..+...+..   ..      .+.     .....+++ ..  
T Consensus         4 ~kIaVi----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~--   75 (287)
T PRK08293          4 KNVTVA----G-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRIT-LT--   75 (287)
T ss_pred             cEEEEE----C-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeE-Ee--
Confidence            689999    5 699999999999999999999999876544321100   00      000     00001111 11  


Q ss_pred             HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh
Q 025587          141 PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (250)
Q Consensus       141 ~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~  176 (250)
                       .++.+++++  .|+||.+...+.+..+.+++.+.+
T Consensus        76 -~d~~~a~~~--aDlVieavpe~~~~k~~~~~~l~~  108 (287)
T PRK08293         76 -TDLAEAVKD--ADLVIEAVPEDPEIKGDFYEELAK  108 (287)
T ss_pred             -CCHHHHhcC--CCEEEEeccCCHHHHHHHHHHHHh
Confidence             234455555  699999988777666676665554

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.47  E-value=0.029  Score=47.57  Aligned_cols=112  Identities=20%  Similarity=0.296  Sum_probs=71.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCC-----------CCCCCcccc---hhcCCceEEe
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMK-----------KPPFNRFNE---IVSAGGKTVW  138 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~-----------~~~~~~~~~---~~~~~v~~v~  138 (250)
                      ..+|+|+     |-|++|++.++.|.+.| -++++++-+.=...++.           ++..+-+.+   ...+..++..
T Consensus        30 ~~~V~Vv-----GiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~  104 (263)
T COG1179          30 QAHVCVV-----GIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTA  104 (263)
T ss_pred             hCcEEEE-----ecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEee
Confidence            4589999     57999999999999999 46888876442222211           110000111   1123333333


Q ss_pred             C----CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC
Q 025587          139 G----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       139 ~----D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      .    +++.+++++.. .+|+||++.- ++..-..++.+|++.++   -++||++.-+..+
T Consensus       105 ~~~f~t~en~~~~~~~-~~DyvIDaiD-~v~~Kv~Li~~c~~~ki---~vIss~Gag~k~D  160 (263)
T COG1179         105 INDFITEENLEDLLSK-GFDYVIDAID-SVRAKVALIAYCRRNKI---PVISSMGAGGKLD  160 (263)
T ss_pred             hHhhhCHhHHHHHhcC-CCCEEEEchh-hhHHHHHHHHHHHHcCC---CEEeeccccCCCC
Confidence            2    38888888876 6999999864 56677789999999776   3457766555443

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=96.44  E-value=0.035  Score=47.30  Aligned_cols=90  Identities=16%  Similarity=0.244  Sum_probs=60.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc---CCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R---~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|+|.    |||+- ++.|+++|...+..+++.+-   +.+..++.            ...+..=.++.+.+.+.++.
T Consensus         2 ~~~ilvl----GGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~------------~~~~~~G~l~~e~l~~~l~e   64 (257)
T COG2099           2 MMRILLL----GGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAEQI------------GPVRVGGFLGAEGLAAFLRE   64 (257)
T ss_pred             CceEEEE----eccHH-HHHHHHHhhccCccEEEEEcccccccchhcc------------CCeeecCcCCHHHHHHHHHH
Confidence            5789999    99875 89999999999855554443   22222211            11111223479999999998


Q ss_pred             CcccEEEeCCC-cCHHhHHHHHHHHHhCCCC
Q 025587          151 VTFDVVLDNNG-KNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       151 ~~~d~Vi~~ag-~~~~~~~~ll~~~~~~~~~  180 (250)
                      .++|.|||..- +-.....|.+++|++.|+.
T Consensus        65 ~~i~llIDATHPyAa~iS~Na~~aake~gip   95 (257)
T COG2099          65 EGIDLLIDATHPYAARISQNAARAAKETGIP   95 (257)
T ss_pred             cCCCEEEECCChHHHHHHHHHHHHHHHhCCc
Confidence            88999998865 2345566777777766554

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.43  E-value=0.011  Score=57.16  Aligned_cols=88  Identities=16%  Similarity=0.235  Sum_probs=63.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +.+|+|.     |.|.+|+.+++.|.++|++|++++.+++..+.+           ...+..++.+|   ++.++++ .-
T Consensus       400 ~~~vII~-----G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-----------~~~g~~v~~GDat~~~~L~~a-gi  462 (601)
T PRK03659        400 KPQVIIV-----GFGRFGQVIGRLLMANKMRITVLERDISAVNLM-----------RKYGYKVYYGDATQLELLRAA-GA  462 (601)
T ss_pred             cCCEEEe-----cCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-----------HhCCCeEEEeeCCCHHHHHhc-CC
Confidence            4678989     589999999999999999999999998665533           33467788888   4444443 33


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                      .+.|+||-+.+. .+....++..+++...
T Consensus       463 ~~A~~vv~~~~d-~~~n~~i~~~~r~~~p  490 (601)
T PRK03659        463 EKAEAIVITCNE-PEDTMKIVELCQQHFP  490 (601)
T ss_pred             ccCCEEEEEeCC-HHHHHHHHHHHHHHCC
Confidence            347888866653 4555667777777543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.43  E-value=0.038  Score=44.75  Aligned_cols=108  Identities=16%  Similarity=0.193  Sum_probs=66.0

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCC-------c-------ccchhcCCceE--E-
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFN-------R-------FNEIVSAGGKT--V-  137 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~-------~-------~~~~~~~~v~~--v-  137 (250)
                      +|+|+    | .|.+|..+++.|+..|. ++++++.+.-...++..+.+.       +       +. ...+.+++  + 
T Consensus         1 ~VlVi----G-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~-~lnp~v~i~~~~   74 (174)
T cd01487           1 KVGIA----G-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLR-EINPFVKIEAIN   74 (174)
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHH-HHCCCCEEEEEE
Confidence            58999    5 69999999999999996 599999865222222211110       0       00 01223332  2 


Q ss_pred             -eCCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEEEcCcccccC
Q 025587          138 -WGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSAGIYKP  193 (250)
Q Consensus       138 -~~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~  193 (250)
                       ..+.+.+.+.+++  +|+||++.. +...-..+.+.+.+. ++ .||+-+..+-|+.
T Consensus        75 ~~~~~~~~~~~l~~--~DlVi~~~d-~~~~r~~i~~~~~~~~~i-p~i~~~~~~~~~~  128 (174)
T cd01487          75 IKIDENNLEGLFGD--CDIVVEAFD-NAETKAMLAESLLGNKNK-PVVCASGMAGFGD  128 (174)
T ss_pred             eecChhhHHHHhcC--CCEEEECCC-CHHHHHHHHHHHHHHCCC-CEEEEehhhccCC
Confidence             2235666777776  799999943 555555677777776 54 5666554444443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.42  E-value=0.022  Score=51.85  Aligned_cols=36  Identities=39%  Similarity=0.553  Sum_probs=33.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..++|.|+    ||.|.+|..+++.|.+.||+|++.+|+.
T Consensus        97 ~~~~I~Ii----GG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         97 DLRPVVIV----GGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             ccceEEEE----cCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            45899999    9999999999999999999999999864

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.41  E-value=0.024  Score=50.39  Aligned_cols=103  Identities=18%  Similarity=0.232  Sum_probs=63.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~  150 (250)
                      +.++|.|+    || |.+|..++..|+..| .+|++++++++..+... ...............+.. .|.   + .+++
T Consensus         4 ~~~KI~II----Ga-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~-lDl~~~~~~~~~~~~i~~~~d~---~-~l~~   73 (319)
T PTZ00117          4 KRKKISMI----GA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKA-LDLKHFSTLVGSNINILGTNNY---E-DIKD   73 (319)
T ss_pred             CCcEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHH-HHHhhhccccCCCeEEEeCCCH---H-HhCC
Confidence            45799999    86 999999999999888 78999999875543211 000000011111122221 343   3 4455


Q ss_pred             CcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCE-EEEEcC
Q 025587          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~-~v~iSS  187 (250)
                        .|+||.++|.              |....+.+.+.+.+...+. +|++|-
T Consensus        74 --ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         74 --SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              5999999972              3455667777777765444 555553

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.39  E-value=0.019  Score=50.22  Aligned_cols=91  Identities=13%  Similarity=0.040  Sum_probs=57.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC-----------CCCCCCcccc--hhcCCceEEeCCH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-----------KKPPFNRFNE--IVSAGGKTVWGDP  141 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-----------~~~~~~~~~~--~~~~~v~~v~~D~  141 (250)
                      ++|-|+    | .|.+|..++..|+..||+|++++++++..+..           .+...-.-.+  .....++ ...|.
T Consensus         6 ~~V~Vi----G-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~-~~~~~   79 (286)
T PRK07819          6 QRVGVV----G-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLR-FTTDL   79 (286)
T ss_pred             cEEEEE----c-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeE-eeCCH
Confidence            589999    6 59999999999999999999999998765431           1110000000  0000111 12233


Q ss_pred             HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhC
Q 025587          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS  177 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~  177 (250)
                          +.+++  +|+||.+..-+.+..+.++..+.+.
T Consensus        80 ----~~~~~--~d~ViEav~E~~~~K~~l~~~l~~~  109 (286)
T PRK07819         80 ----GDFAD--RQLVIEAVVEDEAVKTEIFAELDKV  109 (286)
T ss_pred             ----HHhCC--CCEEEEecccCHHHHHHHHHHHHHh
Confidence                22444  7999999988888777776666553

>PRK14851 hypothetical protein; Provisional

Probab=96.37  E-value=0.046  Score=53.50  Aligned_cols=109  Identities=17%  Similarity=0.187  Sum_probs=68.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCC--ce
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAG--GK  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~--v~  135 (250)
                      ...+|+|+    | .|.+|..+++.|...| -++++++.+.=...++..+-.....+              ...+.  ++
T Consensus        42 ~~~~VlIv----G-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~  116 (679)
T PRK14851         42 AEAKVAIP----G-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEIT  116 (679)
T ss_pred             hcCeEEEE----C-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEE
Confidence            45799999    5 8999999999999999 46777776542222222111110010              01233  33


Q ss_pred             EEeC--CHHHHHhhhcCCcccEEEeCCCcC-HHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       136 ~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~-~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+..  +.+++.+.+.+  +|+||++.... ...-..+.+.|++.++ .+|..+..+
T Consensus       117 ~~~~~i~~~n~~~~l~~--~DvVid~~D~~~~~~r~~l~~~c~~~~i-P~i~~g~~G  170 (679)
T PRK14851        117 PFPAGINADNMDAFLDG--VDVVLDGLDFFQFEIRRTLFNMAREKGI-PVITAGPLG  170 (679)
T ss_pred             EEecCCChHHHHHHHhC--CCEEEECCCCCcHHHHHHHHHHHHHCCC-CEEEeeccc
Confidence            3332  36778888887  79999887642 4445567778888877 466655433

>PRK14852 hypothetical protein; Provisional

Probab=96.36  E-value=0.04  Score=55.50  Aligned_cols=112  Identities=13%  Similarity=0.106  Sum_probs=71.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--  135 (250)
                      ...+|+|+    | .|++|..+++.|+..| -++++++.+.=...++..+-.....+              ...+.++  
T Consensus       331 ~~srVlVv----G-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~  405 (989)
T PRK14852        331 LRSRVAIA----G-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIR  405 (989)
T ss_pred             hcCcEEEE----C-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEE
Confidence            45799999    5 8999999999999999 46777776542222222211111110              1233444  


Q ss_pred             EEe--CCHHHHHhhhcCCcccEEEeCCCc-CHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          136 TVW--GDPAEVGNVVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       136 ~v~--~D~~~l~~~l~~~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+.  .+.+.+.+.+++  +|+||++... ..+..+.+.+.|.+.++ .+|..+..+.++
T Consensus       406 ~~~~~I~~en~~~fl~~--~DiVVDa~D~~~~~~rr~l~~~c~~~~I-P~I~ag~~G~~g  462 (989)
T PRK14852        406 SFPEGVAAETIDAFLKD--VDLLVDGIDFFALDIRRRLFNRALELGI-PVITAGPLGYSC  462 (989)
T ss_pred             EEecCCCHHHHHHHhhC--CCEEEECCCCccHHHHHHHHHHHHHcCC-CEEEeeccccCe
Confidence            332  247888888887  7999998764 34555677788888886 577777655444

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.35  E-value=0.013  Score=51.54  Aligned_cols=103  Identities=22%  Similarity=0.223  Sum_probs=64.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCC---Ccccchhc----CCceEE-eCCHHHHHh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEIVS----AGGKTV-WGDPAEVGN  146 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~---~~~~~~~~----~~v~~v-~~D~~~l~~  146 (250)
                      |+|-|+     |.|.+|..+++.|++.|++|++.+|+++..+.+.+...   ....++..    .++-++ ..|.+.+.+
T Consensus         1 m~Ig~I-----GlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~   75 (299)
T PRK12490          1 MKLGLI-----GLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTES   75 (299)
T ss_pred             CEEEEE-----cccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHH
Confidence            378999     58999999999999999999999998765443322211   11122211    133322 223223333


Q ss_pred             h----hcCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          147 V----VGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       147 ~----l~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +    +... .-.+|||+.......++.+.+.+.+.|+ +||
T Consensus        76 v~~~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~-~~v  116 (299)
T PRK12490         76 VIKDLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGI-HYV  116 (299)
T ss_pred             HHHHHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCC-eEE
Confidence            2    2211 1258889988888888888888887775 444

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.32  E-value=0.012  Score=53.28  Aligned_cols=103  Identities=20%  Similarity=0.246  Sum_probs=62.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC----cccchhcCCce----EEeCCHHHHHh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEIVSAGGK----TVWGDPAEVGN  146 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~----~~~~~~~~~v~----~v~~D~~~l~~  146 (250)
                      |+|-|+     |+||+|.-..--|.+.||+|++++..+++.+.+.+-...    .+.++...+..    ..   ..+..+
T Consensus         1 MkI~vi-----GtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~   72 (414)
T COG1004           1 MKITVI-----GTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEE   72 (414)
T ss_pred             CceEEE-----CCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHH
Confidence            689999     699999999999999999999999988777665422111    12222222211    11   223444


Q ss_pred             hhcCCcccEEEeCCCc--------CHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          147 VVGGVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~--------~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      +++.  .|+++-+.|.        +......+++...+.-.+ ++|.+=|
T Consensus        73 a~~~--adv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          73 AVKD--ADVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             HHhc--CCEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            5555  4888888773        344444444444443222 5565544

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.31  E-value=0.021  Score=50.88  Aligned_cols=96  Identities=15%  Similarity=0.257  Sum_probs=60.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceE-EeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~D~~~l~~~l~~  150 (250)
                      ...+|+|+    |+ |.+|...++.+...|. +|+++++++++.+...           ..+... +..+.+++.+....
T Consensus       169 ~g~~VlV~----G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~~  232 (343)
T PRK09880        169 QGKRVFVS----GV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-----------EMGADKLVNPQNDDLDHYKAE  232 (343)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-----------HcCCcEEecCCcccHHHHhcc
Confidence            35799999    86 9999999998888897 6888888875544321           122222 21122223333322


Q ss_pred             -CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          151 -VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       151 -~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       ..+|+||++.|.. ......++.++..  +++|.++.
T Consensus       233 ~g~~D~vid~~G~~-~~~~~~~~~l~~~--G~iv~~G~  267 (343)
T PRK09880        233 KGYFDVSFEVSGHP-SSINTCLEVTRAK--GVMVQVGM  267 (343)
T ss_pred             CCCCCEEEECCCCH-HHHHHHHHHhhcC--CEEEEEcc
Confidence             1389999999852 2344556666553  47888764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.30  E-value=0.018  Score=51.48  Aligned_cols=97  Identities=19%  Similarity=0.235  Sum_probs=58.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---CccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      .+.+|+|+    |+ |.+|...++.+...|.+|++++|..   ++.+.           ....++..+..+.+++.+...
T Consensus       172 ~g~~vlI~----G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~-----------~~~~Ga~~v~~~~~~~~~~~~  235 (355)
T cd08230         172 NPRRALVL----GA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADI-----------VEELGATYVNSSKTPVAEVKL  235 (355)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-----------HHHcCCEEecCCccchhhhhh
Confidence            45799999    85 9999999998888899999999842   22221           112233332221122211111


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ...+|+||++.|... .....++.++..  ++++.++..
T Consensus       236 ~~~~d~vid~~g~~~-~~~~~~~~l~~~--G~~v~~G~~  271 (355)
T cd08230         236 VGEFDLIIEATGVPP-LAFEALPALAPN--GVVILFGVP  271 (355)
T ss_pred             cCCCCEEEECcCCHH-HHHHHHHHccCC--cEEEEEecC
Confidence            234899999998432 334445555553  378877654

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.30  E-value=0.0019  Score=52.93  Aligned_cols=39  Identities=26%  Similarity=0.508  Sum_probs=30.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      |+|.|+     |.|++|.-++..|++.||+|++++.+++..+.+
T Consensus         1 M~I~Vi-----GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l   39 (185)
T PF03721_consen    1 MKIAVI-----GLGYVGLPLAAALAEKGHQVIGVDIDEEKVEAL   39 (185)
T ss_dssp             -EEEEE-------STTHHHHHHHHHHTTSEEEEE-S-HHHHHHH
T ss_pred             CEEEEE-----CCCcchHHHHHHHHhCCCEEEEEeCChHHHHHH
Confidence            689999     689999999999999999999999988665544

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.29  E-value=0.039  Score=48.51  Aligned_cols=100  Identities=16%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEe-CCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVW-GDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~-~D~~~l~~~l~  149 (250)
                      ++|-|+     |.|.+|..+++.|++.||+|++.+|+++..+.+......   ...+ ....++-++. -+.+.+..++.
T Consensus         2 ~~Ig~I-----GlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~   76 (296)
T PRK15461          2 AAIAFI-----GLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLF   76 (296)
T ss_pred             CeEEEE-----eeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHc
Confidence            479999     589999999999999999999999988665544322111   1111 1223333222 23444555543


Q ss_pred             C-------C-cccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          150 G-------V-TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       150 ~-------~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                      +       . .-..+|++.......++.+.+.+.+.|+
T Consensus        77 ~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~  114 (296)
T PRK15461         77 GENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGF  114 (296)
T ss_pred             CcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence            2       1 1246788888888889999998888765

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.28  E-value=0.042  Score=49.26  Aligned_cols=97  Identities=16%  Similarity=0.247  Sum_probs=62.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC---C-HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---D-PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~---D-~~~l~~  146 (250)
                      ...+|||.    |+ |.+|..+++.+...|.+ |+++++++++.+...           ..+.. ++..   | .+.+.+
T Consensus       176 ~g~~VlV~----G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-----------~~Ga~~~i~~~~~~~~~~i~~  239 (358)
T TIGR03451       176 RGDSVAVI----GC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-----------EFGATHTVNSSGTDPVEAIRA  239 (358)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----------HcCCceEEcCCCcCHHHHHHH
Confidence            46799999    85 99999999998889985 888888775544221           11222 2211   2 334455


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ...+..+|+||++.|.. ......++.++..  +++|.++..
T Consensus       240 ~~~~~g~d~vid~~g~~-~~~~~~~~~~~~~--G~iv~~G~~  278 (358)
T TIGR03451       240 LTGGFGADVVIDAVGRP-ETYKQAFYARDLA--GTVVLVGVP  278 (358)
T ss_pred             HhCCCCCCEEEECCCCH-HHHHHHHHHhccC--CEEEEECCC
Confidence            54544689999999842 2344455555553  478887753

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.27  E-value=0.043  Score=47.11  Aligned_cols=36  Identities=19%  Similarity=0.242  Sum_probs=28.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEE-EEcCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTI-MTVGDE  113 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~-l~R~~~  113 (250)
                      +++|.|.    |++|.+|+.+++.+.+.+ +++.. ++|..+
T Consensus         2 ~iki~V~----Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           2 MIKVAVA----GASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CceEEEE----cCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            5789999    999999999999998875 56444 556543

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.26  E-value=0.0059  Score=53.35  Aligned_cols=38  Identities=26%  Similarity=0.440  Sum_probs=33.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ++|.|+    | .|.+|..++..|++.||+|++++++++..+.
T Consensus         2 ~~V~VI----G-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~   39 (288)
T PRK09260          2 EKLVVV----G-AGVMGRGIAYVFAVSGFQTTLVDIKQEQLES   39 (288)
T ss_pred             cEEEEE----C-ccHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            579999    5 5999999999999999999999998766554

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.26  E-value=0.0094  Score=52.15  Aligned_cols=38  Identities=24%  Similarity=0.274  Sum_probs=33.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      .++|.|+    | .|.+|..++..|+++|++|++.+|+++..+
T Consensus         4 ~~kI~vI----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~   41 (292)
T PRK07530          4 IKKVGVI----G-AGQMGNGIAHVCALAGYDVLLNDVSADRLE   41 (292)
T ss_pred             CCEEEEE----C-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            3689999    5 699999999999999999999999876554

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.24  E-value=0.022  Score=50.21  Aligned_cols=101  Identities=20%  Similarity=0.219  Sum_probs=60.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~  151 (250)
                      +++|.|+    |+ |.+|..++..|+..|. +|++++++++..+..... ...-.........+. ..|.+    .+.+ 
T Consensus         2 ~~KI~VI----Ga-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d-l~~~~~~~~~~~~i~~~~d~~----~~~~-   70 (307)
T PRK06223          2 RKKISII----GA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD-IAEAAPVEGFDTKITGTNDYE----DIAG-   70 (307)
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH-HHhhhhhcCCCcEEEeCCCHH----HHCC-
Confidence            3799999    87 9999999999998875 999999977654321100 000000011112222 23432    3455 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                       .|+||.++|              .|....+.+++.+.+...+ .+|.++
T Consensus        71 -aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         71 -SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             -CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             599999886              2445566666666665444 355554

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.24  E-value=0.039  Score=48.24  Aligned_cols=106  Identities=20%  Similarity=0.203  Sum_probs=63.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCC---Ccccch-hcCCceEEeC-CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEI-VSAGGKTVWG-DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~---~~~~~~-~~~~v~~v~~-D~~~l~~~  147 (250)
                      |.++|.|+    | .|.+|..+++.|++.|++|++.+|+++..+.+.+...   ..+.+. ...++-++.. +...+..+
T Consensus         1 ~~~~Igvi----G-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v   75 (296)
T PRK11559          1 MTMKVGFI----G-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEV   75 (296)
T ss_pred             CCceEEEE----c-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHH
Confidence            34689999    5 7999999999999999999999998755443321111   111221 2233332222 23333333


Q ss_pred             h-------cCCc-ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          148 V-------GGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       148 l-------~~~~-~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      +       .... -.+++++........+.+.+.+.+.|+ +|+.
T Consensus        76 ~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~-~~~d  119 (296)
T PRK11559         76 ALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGI-EMLD  119 (296)
T ss_pred             HcCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC-cEEE
Confidence            2       1111 246677777777777777777776554 3443

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.24  E-value=0.036  Score=47.91  Aligned_cols=98  Identities=16%  Similarity=0.234  Sum_probs=62.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce--EEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~D---~~~l~~~  147 (250)
                      .+++|+|+    |++|.+|..+++.+...|.+|+++++.++..+.+.+           .++.  +...+   .+.+.+.
T Consensus       144 ~g~~vlI~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  208 (325)
T cd08253         144 AGETVLVH----GGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-----------AGADAVFNYRAEDLADRILAA  208 (325)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCCEEEeCCCcCHHHHHHHH
Confidence            45799999    999999999999999999999999887654432211           1111  11112   2334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|.|+++++..  .....++....  ..+++.+++..
T Consensus       209 ~~~~~~d~vi~~~~~~--~~~~~~~~l~~--~g~~v~~~~~~  246 (325)
T cd08253         209 TAGQGVDVIIEVLANV--NLAKDLDVLAP--GGRIVVYGSGG  246 (325)
T ss_pred             cCCCceEEEEECCchH--HHHHHHHhhCC--CCEEEEEeecC
Confidence            4444699999998743  22233333333  35788887643

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PLN02775 Probable dihydrodipicolinate reductase

Probab=96.23  E-value=0.12  Score=45.22  Aligned_cols=95  Identities=17%  Similarity=0.198  Sum_probs=55.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~  149 (250)
                      .+..+|+|.    |++|.+|+.+++...+.+.+++.. +++.+..+ +.       -++...++.+. ..|.+++.....
T Consensus         9 ~~~i~V~V~----Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~-~~-------~~~~g~~v~~~~~~dl~~~l~~~~   76 (286)
T PLN02775          9 GSAIPIMVN----GCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVG-VT-------VEVCGVEVRLVGPSEREAVLSSVK   76 (286)
T ss_pred             CCCCeEEEE----CCCChHHHHHHHHHhcCCCEEEEEecccccccc-cc-------ceeccceeeeecCccHHHHHHHhh
Confidence            344699999    999999999999999988887764 33332111 10       01111123322 134333332222


Q ss_pred             CCccc-EEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          150 GVTFD-VVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       150 ~~~~d-~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      ...+| ++|++.  ....+...++.|.++|+.
T Consensus        77 ~~~~~~VvIDFT--~P~a~~~~~~~~~~~g~~  106 (286)
T PLN02775         77 AEYPNLIVVDYT--LPDAVNDNAELYCKNGLP  106 (286)
T ss_pred             ccCCCEEEEECC--ChHHHHHHHHHHHHCCCC
Confidence            22477 788885  355666666777666653

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.22  E-value=0.023  Score=49.79  Aligned_cols=107  Identities=13%  Similarity=0.168  Sum_probs=71.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC--C-HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG--D-PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--D-~~~l~~~  147 (250)
                      +..+.+|+|.    +|+|-+|.-+.+-..-+|++|+.+.-++++.+.+.+.        ...+.-+..-  | .+.|.++
T Consensus       148 pk~GetvvVS----aAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~--------lGfD~~idyk~~d~~~~L~~a  215 (340)
T COG2130         148 PKAGETVVVS----AAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEE--------LGFDAGIDYKAEDFAQALKEA  215 (340)
T ss_pred             CCCCCEEEEE----ecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHh--------cCCceeeecCcccHHHHHHHH
Confidence            3457899999    9999999988887777899999999998877654331        1112222211  2 3444444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      ..+ .+|+.++|.|-++..  .+++.+..  -.|++.++-++-|..+
T Consensus       216 ~P~-GIDvyfeNVGg~v~D--Av~~~ln~--~aRi~~CG~IS~YN~~  257 (340)
T COG2130         216 CPK-GIDVYFENVGGEVLD--AVLPLLNL--FARIPVCGAISQYNAP  257 (340)
T ss_pred             CCC-CeEEEEEcCCchHHH--HHHHhhcc--ccceeeeeehhhcCCC
Confidence            433 499999998855321  22222322  3589999999999876

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.21  E-value=0.043  Score=48.18  Aligned_cols=99  Identities=16%  Similarity=0.145  Sum_probs=64.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|+|.    |++|.+|..+++.+...|.+|++++++++..+.+.+           .++. ++..+    .+.+...
T Consensus       139 ~~~~vlI~----ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~v~~~~~~~~~~~~~~~  203 (329)
T cd08250         139 SGETVLVT----AAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-----------LGCDRPINYKTEDLGEVLKKE  203 (329)
T ss_pred             CCCEEEEE----eCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-----------cCCceEEeCCCccHHHHHHHh
Confidence            45789999    999999999999999999999999887654432211           1111 22222    2233333


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                      . +..+|.|+++.|.  ......++.++.  .++||.++....+
T Consensus       204 ~-~~~vd~v~~~~g~--~~~~~~~~~l~~--~g~~v~~g~~~~~  242 (329)
T cd08250         204 Y-PKGVDVVYESVGG--EMFDTCVDNLAL--KGRLIVIGFISGY  242 (329)
T ss_pred             c-CCCCeEEEECCcH--HHHHHHHHHhcc--CCeEEEEecccCC
Confidence            2 2358999999883  445555665544  3489988876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.21  E-value=0.046  Score=46.05  Aligned_cols=97  Identities=20%  Similarity=0.362  Sum_probs=61.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D---~~~l~~~  147 (250)
                      .+.+|||+    |+.+ +|..+++.+...|.+|++++++++..+.+.+.           +.. ++ ..+   .+.+. .
T Consensus       134 ~~~~vli~----g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~-~  196 (271)
T cd05188         134 PGDTVLVL----GAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKEL-----------GADHVIDYKEEDLEEELR-L  196 (271)
T ss_pred             CCCEEEEE----CCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHh-----------CCceeccCCcCCHHHHHH-H
Confidence            45799999    9999 99999999999999999998876443322111           111 11 111   22222 2


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|+++++++.. .....+++.++.  -.+++.++...
T Consensus       197 ~~~~~~d~vi~~~~~~-~~~~~~~~~l~~--~G~~v~~~~~~  235 (271)
T cd05188         197 TGGGGADVVIDAVGGP-ETLAQALRLLRP--GGRIVVVGGTS  235 (271)
T ss_pred             hcCCCCCEEEECCCCH-HHHHHHHHhccc--CCEEEEEccCC
Confidence            3344699999998852 334455565554  35788887644

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.21  E-value=0.026  Score=50.54  Aligned_cols=97  Identities=15%  Similarity=0.113  Sum_probs=61.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC----C-HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG----D-PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~----D-~~~l~~  146 (250)
                      ...+|||.    ||+|.+|..+++.+...|.+|+++++++++.+.+.+          ..+.. ++..    | .+.+.+
T Consensus       158 ~g~~VlV~----GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~----------~lGa~~vi~~~~~~~~~~~i~~  223 (348)
T PLN03154        158 KGDSVFVS----AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKN----------KLGFDEAFNYKEEPDLDAALKR  223 (348)
T ss_pred             CCCEEEEe----cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----------hcCCCEEEECCCcccHHHHHHH
Confidence            45799999    999999999999888899999988877654432210          11222 2211    2 122333


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .. +..+|+|+++.|.  ......++.++..  ++++.++..
T Consensus       224 ~~-~~gvD~v~d~vG~--~~~~~~~~~l~~~--G~iv~~G~~  260 (348)
T PLN03154        224 YF-PEGIDIYFDNVGG--DMLDAALLNMKIH--GRIAVCGMV  260 (348)
T ss_pred             HC-CCCcEEEEECCCH--HHHHHHHHHhccC--CEEEEECcc
Confidence            32 2358999999984  3444555555543  478877653

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.20  E-value=0.043  Score=47.88  Aligned_cols=99  Identities=15%  Similarity=0.147  Sum_probs=65.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|+|.    |++|.+|..+++.+...|.+|+++++++++.+.+.+.           ++. ++..+    .+.+.+.
T Consensus       138 ~~~~vlI~----g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~  202 (323)
T cd05282         138 PGDWVIQN----AANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKAL-----------GADEVIDSSPEDLAQRVKEA  202 (323)
T ss_pred             CCCEEEEc----ccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhc-----------CCCEEecccchhHHHHHHHH
Confidence            35799999    9999999999999999999999998887554432111           222 22122    3344445


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      ..+..+|.|+++.|..  .....++.++.  .++||.++....
T Consensus       203 ~~~~~~d~vl~~~g~~--~~~~~~~~l~~--~g~~v~~g~~~~  241 (323)
T cd05282         203 TGGAGARLALDAVGGE--SATRLARSLRP--GGTLVNYGLLSG  241 (323)
T ss_pred             hcCCCceEEEECCCCH--HHHHHHHhhCC--CCEEEEEccCCC
Confidence            4555699999998843  23455555544  357888876543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.19  E-value=0.05  Score=49.00  Aligned_cols=95  Identities=19%  Similarity=0.309  Sum_probs=59.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe--CCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW--GDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~--~D~~~l~~~l~~  150 (250)
                      ...+|||.    |+ |.+|..+++.+...|.+|++++.+.++...+.          ...++..+.  .+.+.+.+... 
T Consensus       183 ~g~~VlV~----G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~----------~~~Ga~~vi~~~~~~~~~~~~~-  246 (360)
T PLN02586        183 PGKHLGVA----GL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI----------NRLGADSFLVSTDPEKMKAAIG-  246 (360)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHH----------HhCCCcEEEcCCCHHHHHhhcC-
Confidence            45789999    75 99999999999899999988877654332211          111232221  22345555443 


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .+|+||++.|. .......++.++..  ++++.++.
T Consensus       247 -~~D~vid~~g~-~~~~~~~~~~l~~~--G~iv~vG~  279 (360)
T PLN02586        247 -TMDYIIDTVSA-VHALGPLLGLLKVN--GKLITLGL  279 (360)
T ss_pred             -CCCEEEECCCC-HHHHHHHHHHhcCC--cEEEEeCC
Confidence             38999999883 22344455555543  47887764

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.19  E-value=0.022  Score=45.99  Aligned_cols=37  Identities=32%  Similarity=0.397  Sum_probs=32.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..+++|+|+    |+.+.+|..+++.|.++|.+|+++.|..
T Consensus        42 l~gk~vlVi----G~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVV----GRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEE----CCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            457899999    8866789999999999999999988753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.18  E-value=0.052  Score=48.04  Aligned_cols=102  Identities=21%  Similarity=0.324  Sum_probs=63.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +||.|+    |+ |+||+.++..|+.++  .++++++..++..+..... ...-......+. .+.+| .+ .+.+++  
T Consensus         1 ~KVavi----Ga-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~D-L~~~~~~~~~~~-~i~~~-~~-y~~~~~--   69 (313)
T COG0039           1 MKVAVI----GA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALD-LSHAAAPLGSDV-KITGD-GD-YEDLKG--   69 (313)
T ss_pred             CeEEEE----CC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcc-hhhcchhccCce-EEecC-CC-hhhhcC--
Confidence            589999    98 999999999998875  5899999985444322111 000000111122 22332 12 334455  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+|+-+||              .|..-.+.+.....+.+.+-++.+-|
T Consensus        70 aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          70 ADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            599999998              46777888888888866555555444

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.18  E-value=0.069  Score=47.36  Aligned_cols=109  Identities=23%  Similarity=0.281  Sum_probs=66.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce--EEe
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK--TVW  138 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~--~v~  138 (250)
                      +|||+    | .|.+|.++++.|+..| -+++++|.+.-...++..+-+.+..+              ...++++  .+.
T Consensus         1 kVlIV----G-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~   75 (312)
T cd01489           1 KVLVV----G-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYH   75 (312)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEe
Confidence            58999    6 6999999999999999 57888887653333332221111010              0122333  333


Q ss_pred             CCH---HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          139 GDP---AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       139 ~D~---~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      .+.   ....+.+++  +|+||.+.. +...-..+-+.|.+.++ .||..++.|.+|.
T Consensus        76 ~~i~~~~~~~~f~~~--~DvVv~a~D-n~~ar~~in~~c~~~~i-p~I~~gt~G~~G~  129 (312)
T cd01489          76 ANIKDPDFNVEFFKQ--FDLVFNALD-NLAARRHVNKMCLAADV-PLIESGTTGFLGQ  129 (312)
T ss_pred             ccCCCccchHHHHhc--CCEEEECCC-CHHHHHHHHHHHHHCCC-CEEEEecCcceeE
Confidence            332   122355565  799998864 56666667777888775 6788777776554

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.13  E-value=0.043  Score=47.89  Aligned_cols=97  Identities=23%  Similarity=0.251  Sum_probs=65.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-C---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-D---~~~l~~~  147 (250)
                      ...+|+|+    |++|.+|..+++.+...|.+|++++++++..+.+.+           .++. ++.. +   .+.+.+.
T Consensus       142 ~~~~vlI~----g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  206 (324)
T cd08244         142 PGDVVLVT----AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-----------LGADVAVDYTRPDWPDQVREA  206 (324)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCCCEEEecCCccHHHHHHHH
Confidence            35689999    999999999999999999999999887754443211           1222 2221 2   3344445


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+..+|.|+++.|..  .....++++...  +++|.++..
T Consensus       207 ~~~~~~d~vl~~~g~~--~~~~~~~~l~~~--g~~v~~g~~  243 (324)
T cd08244         207 LGGGGVTVVLDGVGGA--IGRAALALLAPG--GRFLTYGWA  243 (324)
T ss_pred             cCCCCceEEEECCChH--hHHHHHHHhccC--cEEEEEecC
Confidence            5555699999998843  235556666443  578888754

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.12  E-value=0.037  Score=49.29  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=63.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~  150 (250)
                      +.+||.|+    | .|.+|..++..++..|. +|++++.+++...... ..............++.. +|.+    .+.+
T Consensus         5 ~~~KI~II----G-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~-ld~~~~~~~~~~~~~I~~~~d~~----~l~~   74 (321)
T PTZ00082          5 KRRKISLI----G-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKA-LDISHSNVIAGSNSKVIGTNNYE----DIAG   74 (321)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHH-HHHHhhhhccCCCeEEEECCCHH----HhCC
Confidence            34689999    7 69999999999999995 8999999876432100 000000011112233332 4543    3455


Q ss_pred             CcccEEEeCCCc-------------------CHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          151 VTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                        .|+||.++|.                   |....+.+++.+.+...+ .+|.+|-
T Consensus        75 --aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         75 --SDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             --CCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              5999998863                   444566677777775544 5666654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.12  E-value=0.0058  Score=53.23  Aligned_cols=42  Identities=26%  Similarity=0.378  Sum_probs=35.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKM  118 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~  118 (250)
                      ...++|+|+    |+ |.+|+++++.|.+.| .+|++++|+.++.+.+
T Consensus       121 ~~~k~vlVl----Ga-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l  163 (278)
T PRK00258        121 LKGKRILIL----GA-GGAARAVILPLLDLGVAEITIVNRTVERAEEL  163 (278)
T ss_pred             CCCCEEEEE----cC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            346799999    75 999999999999999 7999999987665543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.11  E-value=0.02  Score=55.62  Aligned_cols=86  Identities=19%  Similarity=0.354  Sum_probs=61.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      .++|+|.     |.|.+|+.+++.|.++|+++++++.+++..+.+           ...+..++.+|   ++.++++ .-
T Consensus       400 ~~~vII~-----G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-----------~~~g~~v~~GDat~~~~L~~a-gi  462 (621)
T PRK03562        400 QPRVIIA-----GFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-----------RKFGMKVFYGDATRMDLLESA-GA  462 (621)
T ss_pred             cCcEEEE-----ecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-----------HhcCCeEEEEeCCCHHHHHhc-CC
Confidence            4689999     579999999999999999999999998766543           23467788888   4434332 32


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSS  177 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~  177 (250)
                      .+.|.||-+.. |.+....++..+++.
T Consensus       463 ~~A~~vvv~~~-d~~~n~~i~~~ar~~  488 (621)
T PRK03562        463 AKAEVLINAID-DPQTSLQLVELVKEH  488 (621)
T ss_pred             CcCCEEEEEeC-CHHHHHHHHHHHHHh
Confidence            34788886654 344455566666664

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=96.09  E-value=0.044  Score=47.82  Aligned_cols=96  Identities=21%  Similarity=0.207  Sum_probs=62.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-C-C-HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-D-PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~-D-~~~l~~~l~~~  151 (250)
                      .+|+|.    |++|.+|..+++.+...|.+|+++++++++.+.+.+           .++..+. . + ...+.+...+.
T Consensus       148 ~~vlI~----g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~  212 (325)
T cd05280         148 GPVLVT----GATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-----------LGASEVLDREDLLDESKKPLLKA  212 (325)
T ss_pred             CEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----------cCCcEEEcchhHHHHHHHHhcCC
Confidence            589999    999999999999888999999999988755443211           1222111 1 1 12233334333


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+|.|+++.+.  ......++.++..  ++||.++...
T Consensus       213 ~~d~vi~~~~~--~~~~~~~~~l~~~--g~~v~~g~~~  246 (325)
T cd05280         213 RWAGAIDTVGG--DVLANLLKQTKYG--GVVASCGNAA  246 (325)
T ss_pred             CccEEEECCch--HHHHHHHHhhcCC--CEEEEEecCC
Confidence            58999999874  3455556666543  5788887643

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.09  E-value=0.048  Score=48.27  Aligned_cols=100  Identities=15%  Similarity=0.278  Sum_probs=59.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCCHHHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ||.|+    |+ |.+|..++..|+.+|  -++++++..++..+..... ...-..+.. .++++..+|.++    +++  
T Consensus         1 Ki~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~D-L~~~~~~~~~~~~~i~~~~y~~----~~~--   68 (307)
T cd05290           1 KLVVI----GA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALD-FHHATALTYSTNTKIRAGDYDD----CAD--   68 (307)
T ss_pred             CEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHH-HHhhhccCCCCCEEEEECCHHH----hCC--
Confidence            58899    76 999999999999887  4799999876544321100 000000111 234444456544    444  


Q ss_pred             ccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||-+||.                |....+.+++.+++++..-++.+-|
T Consensus        69 aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          69 ADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            5999999983                2334566666666666554444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.09  E-value=0.052  Score=48.02  Aligned_cols=94  Identities=23%  Similarity=0.323  Sum_probs=59.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCcccc----CCCCCCCcccchhcCCceEEeCCHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDK----MKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~----~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l  148 (250)
                      |+|.|+    |+ |.+|..++..|+.+|  ++|.+++++.+..+.    +.+..     ... ....+..+|.++    +
T Consensus         1 mkI~II----Ga-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~-----~~~-~~~~i~~~d~~~----l   65 (308)
T cd05292           1 MKVAIV----GA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGT-----PFV-KPVRIYAGDYAD----C   65 (308)
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccc-----ccc-CCeEEeeCCHHH----h
Confidence            479999    76 999999999999999  689999998755432    11110     000 112233344433    4


Q ss_pred             cCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCE-EEEE
Q 025587          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQ-FLFI  185 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~-~v~i  185 (250)
                      ++  .|+||.+++.              |....+.+++.+++.+.+- ++.+
T Consensus        66 ~~--aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          66 KG--ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             CC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            55  5999999883              4445666666666654333 4444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.09  E-value=0.034  Score=51.23  Aligned_cols=90  Identities=17%  Similarity=0.108  Sum_probs=57.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      .+++|+|+     |.|.||..+++.+...|.+|+++++++......           ...+...+  +.   .+++.+  
T Consensus       201 ~GktVvVi-----G~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-----------~~~G~~~~--~~---~e~v~~--  257 (413)
T cd00401         201 AGKVAVVA-----GYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-----------AMEGYEVM--TM---EEAVKE--  257 (413)
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-----------HhcCCEEc--cH---HHHHcC--
Confidence            47899999     579999999999999999999998876543321           12233322  22   344554  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||.+.|..-.-....++.++.  -..+++++.
T Consensus       258 aDVVI~atG~~~~i~~~~l~~mk~--GgilvnvG~  290 (413)
T cd00401         258 GDIFVTTTGNKDIITGEHFEQMKD--GAIVCNIGH  290 (413)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCC--CcEEEEeCC
Confidence            699999988432222223444444  236777763

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK07877 hypothetical protein; Provisional

Probab=96.09  E-value=0.07  Score=52.52  Aligned_cols=104  Identities=17%  Similarity=0.267  Sum_probs=67.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccc--------------hhcCCce-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGK-  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~-  135 (250)
                      .+.+|+|+    |. | +|..++..|...|.  ++++++.+.=...++....+ ....              ...++++ 
T Consensus       106 ~~~~V~Iv----G~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~-~~~diG~~Kv~~a~~~l~~inp~i~v  178 (722)
T PRK07877        106 GRLRIGVV----GL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPA-GVFDLGVNKAVVAARRIAELDPYLPV  178 (722)
T ss_pred             hcCCEEEE----Ee-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccC-ChhhcccHHHHHHHHHHHHHCCCCEE
Confidence            46799999    87 7 99999999999994  88888876522233322111 1110              1223344 


Q ss_pred             -EEeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          136 -TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       136 -~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .+..  +.+.+.+++.+  +|+||+|.- |+..-..+-++|.+.++ .+|+-++
T Consensus       179 ~~~~~~i~~~n~~~~l~~--~DlVvD~~D-~~~~R~~ln~~a~~~~i-P~i~~~~  229 (722)
T PRK07877        179 EVFTDGLTEDNVDAFLDG--LDVVVEECD-SLDVKVLLREAARARRI-PVLMATS  229 (722)
T ss_pred             EEEeccCCHHHHHHHhcC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence             3322  37889988887  799999976 34444445577788776 5666554

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.08  E-value=0.06  Score=47.28  Aligned_cols=99  Identities=17%  Similarity=0.197  Sum_probs=64.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEE-eCCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTV-WGDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v-~~D~~~l~~~l~  149 (250)
                      |+|-++     |.|.+|..+++.|++.||+|++.+|.++ .+.+......   ...+ ....++.++ ..|.+.+.+++.
T Consensus         1 m~Ig~I-----GlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~   74 (292)
T PRK15059          1 MKLGFI-----GLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLF   74 (292)
T ss_pred             CeEEEE-----ccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHc
Confidence            368999     5899999999999999999999988753 2222111111   1111 122333322 235555666542


Q ss_pred             C--------CcccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          150 G--------VTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       150 ~--------~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                      +        .+-.+||++..+....++.+.+.+.+.|+
T Consensus        75 ~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~  112 (292)
T PRK15059         75 GENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGG  112 (292)
T ss_pred             CCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence            2        11258899999999999999999988776

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.05  E-value=0.049  Score=41.09  Aligned_cols=36  Identities=22%  Similarity=0.393  Sum_probs=27.3

Q ss_pred             cEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        75 ~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      |+|.|+    |++   +..|..+++.|.+.||+|+.+.-..+.
T Consensus         1 ksiAVv----GaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~   39 (116)
T PF13380_consen    1 KSIAVV----GASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGE   39 (116)
T ss_dssp             -EEEEE----T--SSTTSHHHHHHHHHHHTT-EEEEESTTCSE
T ss_pred             CEEEEE----cccCCCCChHHHHHHHHHhCCCEEEEECCCceE
Confidence            579999    987   778999999999999999998655533

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.05  E-value=0.012  Score=53.58  Aligned_cols=98  Identities=19%  Similarity=0.221  Sum_probs=63.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ...+|+|+    |+ |.+|..+++.|...|.+|++++|+.+..+.+...        ....+.....+.+++.+.+.+  
T Consensus       166 ~~~~VlVi----Ga-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~--------~g~~v~~~~~~~~~l~~~l~~--  230 (370)
T TIGR00518       166 EPGDVTII----GG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAE--------FGGRIHTRYSNAYEIEDAVKR--  230 (370)
T ss_pred             CCceEEEE----cC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHh--------cCceeEeccCCHHHHHHHHcc--
Confidence            45679999    65 9999999999999999999999987543322110        111122233457788888876  


Q ss_pred             ccEEEeCCCcC----H-HhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKN----L-DAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~----~-~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||++.+..    . .-+...++.++..  ..||-++.
T Consensus       231 aDvVI~a~~~~g~~~p~lit~~~l~~mk~g--~vIvDva~  268 (370)
T TIGR00518       231 ADLLIGAVLIPGAKAPKLVSNSLVAQMKPG--AVIVDVAI  268 (370)
T ss_pred             CCEEEEccccCCCCCCcCcCHHHHhcCCCC--CEEEEEec
Confidence            69999987421    1 1234455555432  35666664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.03  E-value=0.059  Score=47.56  Aligned_cols=34  Identities=26%  Similarity=0.343  Sum_probs=31.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      +|+|.|+     |.|-+|..+++.|.+.||+|++.+|+.
T Consensus         4 ~m~I~ii-----G~G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          4 PKTIAIL-----GAGAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCEEEEE-----CccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4789999     579999999999999999999999875

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.03  E-value=0.02  Score=52.86  Aligned_cols=67  Identities=19%  Similarity=0.215  Sum_probs=46.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      .+++|+|+    | .|.||+.+++.|...|.+|+++++++......           ...+.+++  +   +.+++++  
T Consensus       211 ~Gk~VlVi----G-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-----------~~~G~~v~--~---l~eal~~--  267 (425)
T PRK05476        211 AGKVVVVA----G-YGDVGKGCAQRLRGLGARVIVTEVDPICALQA-----------AMDGFRVM--T---MEEAAEL--  267 (425)
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-----------HhcCCEec--C---HHHHHhC--
Confidence            57899999    5 69999999999999999999999877443211           11122221  2   3444554  


Q ss_pred             ccEEEeCCCc
Q 025587          153 FDVVLDNNGK  162 (250)
Q Consensus       153 ~d~Vi~~ag~  162 (250)
                      .|+||.+.|.
T Consensus       268 aDVVI~aTG~  277 (425)
T PRK05476        268 GDIFVTATGN  277 (425)
T ss_pred             CCEEEECCCC
Confidence            6999988763

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.03  E-value=0.062  Score=47.68  Aligned_cols=98  Identities=21%  Similarity=0.215  Sum_probs=62.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~~~  152 (250)
                      ||.|+    |++|.+|..++..|+.+|.  +++++++.+.....+      .+.... ....+.. .+.+++.+.+++  
T Consensus         1 KV~Ii----GaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~------DL~~~~-~~~~i~~~~~~~~~~~~~~d--   67 (312)
T TIGR01772         1 KVAVL----GAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAA------DLSHIP-TAASVKGFSGEEGLENALKG--   67 (312)
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEc------hhhcCC-cCceEEEecCCCchHHHcCC--
Confidence            58999    9999999999999988874  799999876111111      011111 1122221 122335566777  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCE-EEEEc
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQ-FLFIS  186 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~-~v~iS  186 (250)
                      .|+||-++|              .|....+.+.+..++.+.+- +|.+|
T Consensus        68 aDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        68 ADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             CCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            599999998              36667778888877766444 44444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.02  E-value=0.059  Score=47.72  Aligned_cols=97  Identities=19%  Similarity=0.267  Sum_probs=61.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCceE-EeC-C--HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG-D--PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~-D--~~~l~~~  147 (250)
                      ...+|||+    |+ |.+|..+++.+...|.+ |+++++++++.+...           ..++.. +.. +  .+.+.+.
T Consensus       163 ~g~~vlV~----G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-----------~~ga~~~i~~~~~~~~~~~~~  226 (339)
T cd08239         163 GRDTVLVV----GA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-----------ALGADFVINSGQDDVQEIREL  226 (339)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-----------HhCCCEEEcCCcchHHHHHHH
Confidence            36799999    86 99999999999899988 998888765443211           112221 111 1  3344444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+..+|+||++.|... .....++.++..  ++++.++..
T Consensus       227 ~~~~~~d~vid~~g~~~-~~~~~~~~l~~~--G~~v~~g~~  264 (339)
T cd08239         227 TSGAGADVAIECSGNTA-ARRLALEAVRPW--GRLVLVGEG  264 (339)
T ss_pred             hCCCCCCEEEECCCCHH-HHHHHHHHhhcC--CEEEEEcCC
Confidence            45446899999988432 223445555553  478887753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.01  E-value=0.061  Score=46.65  Aligned_cols=95  Identities=20%  Similarity=0.212  Sum_probs=63.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---C-HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D-~~~l~~~l  148 (250)
                      .+.+|+|.    |++|.+|..+++.+...|.+|+++++++++.+.+.+           .++..+..   + .+.+.+. 
T Consensus       142 ~g~~vlV~----ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~i~~~-  205 (320)
T cd08243         142 PGDTLLIR----GGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-----------LGADEVVIDDGAIAEQLRAA-  205 (320)
T ss_pred             CCCEEEEE----cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----------cCCcEEEecCccHHHHHHHh-
Confidence            45799999    999999999999999999999999887754432211           12222211   2 3344444 


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       +..+|.++++.|.  ......++.+...  ++|+.++..
T Consensus       206 -~~~~d~vl~~~~~--~~~~~~~~~l~~~--g~~v~~g~~  240 (320)
T cd08243         206 -PGGFDKVLELVGT--ATLKDSLRHLRPG--GIVCMTGLL  240 (320)
T ss_pred             -CCCceEEEECCCh--HHHHHHHHHhccC--CEEEEEccC
Confidence             3459999999884  3344555555543  478877753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.01  E-value=0.015  Score=50.65  Aligned_cols=97  Identities=16%  Similarity=0.197  Sum_probs=57.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc-----------CCCCCCCcccch--hcCCceEEeCCH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-----------MKKPPFNRFNEI--VSAGGKTVWGDP  141 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~-----------~~~~~~~~~~~~--~~~~v~~v~~D~  141 (250)
                      ++|.|+    | .|.+|..++..|++.|++|++++++++..+.           +.+...-.....  ...++. ...|.
T Consensus         4 ~kI~VI----G-~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~-~~~~~   77 (282)
T PRK05808          4 QKIGVI----G-AGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARIT-GTTDL   77 (282)
T ss_pred             cEEEEE----c-cCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeE-EeCCH
Confidence            579999    5 6999999999999999999999988765531           100000000000  000111 12233


Q ss_pred             HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEE
Q 025587          142 AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFL  183 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v  183 (250)
                      +.    +++  +|+||.+...+......++..+.+ .....+|
T Consensus        78 ~~----~~~--aDlVi~av~e~~~~k~~~~~~l~~~~~~~~il  114 (282)
T PRK05808         78 DD----LKD--ADLVIEAATENMDLKKKIFAQLDEIAKPEAIL  114 (282)
T ss_pred             HH----hcc--CCeeeecccccHHHHHHHHHHHHhhCCCCcEE
Confidence            22    333  699998887666666666666555 2333455

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=96.00  E-value=0.012  Score=51.58  Aligned_cols=37  Identities=24%  Similarity=0.291  Sum_probs=32.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      ++|.|+    | .|.+|..++..|+..|++|++++++++..+
T Consensus         5 ~~V~vI----G-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~   41 (295)
T PLN02545          5 KKVGVV----G-AGQMGSGIAQLAAAAGMDVWLLDSDPAALS   41 (295)
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            679999    5 699999999999999999999999875543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.98  E-value=0.029  Score=52.11  Aligned_cols=36  Identities=28%  Similarity=0.448  Sum_probs=33.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      |+|.|+    ||.|.+|..+++.|.+.|++|++++|+++.
T Consensus         1 MkI~II----GG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          1 MKISII----GGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             CEEEEE----ecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            579999    999999999999999999999999998754

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.98  E-value=0.011  Score=49.03  Aligned_cols=40  Identities=28%  Similarity=0.491  Sum_probs=33.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      ..+|+|+|+    | .|.+|+++++.|.+.|++|++.+++.+...
T Consensus        26 l~gk~v~I~----G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~   65 (200)
T cd01075          26 LEGKTVAVQ----G-LGKVGYKLAEHLLEEGAKLIVADINEEAVA   65 (200)
T ss_pred             CCCCEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            356899999    6 589999999999999999999888764433

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.98  E-value=0.065  Score=46.38  Aligned_cols=98  Identities=22%  Similarity=0.189  Sum_probs=62.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|+|+    |++|.+|..+++.+...|++|++++++++..+.+..           .++. ++...    .+.+...
T Consensus       139 ~~~~vlv~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  203 (325)
T TIGR02824       139 AGETVLIH----GGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEA-----------LGADIAINYREEDFVEVVKAE  203 (325)
T ss_pred             CCCEEEEE----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------cCCcEEEecCchhHHHHHHHH
Confidence            45799999    999999999999999999999999887654332111           1121 11111    2334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|.+++++|..  .....++.+..  -+++|.++...
T Consensus       204 ~~~~~~d~~i~~~~~~--~~~~~~~~l~~--~g~~v~~g~~~  241 (325)
T TIGR02824       204 TGGKGVDVILDIVGGS--YLNRNIKALAL--DGRIVQIGFQG  241 (325)
T ss_pred             cCCCCeEEEEECCchH--HHHHHHHhhcc--CcEEEEEecCC
Confidence            4444589999998842  33334444433  35888887644

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.94  E-value=0.05  Score=46.85  Aligned_cols=97  Identities=22%  Similarity=0.274  Sum_probs=63.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      ...+|+|.    |++|.+|..+++.+...|.+|++++++++..+.+.+           .++. ++..+    .+.+...
T Consensus       136 ~g~~vlI~----g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  200 (320)
T cd05286         136 PGDTVLVH----AAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-----------AGADHVINYRDEDFVERVREI  200 (320)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-----------CCCCEEEeCCchhHHHHHHHH
Confidence            45789999    999999999999999999999999877654443211           1222 22222    2334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+..+|.|+++.+.  ......++.++.  .++++.++..
T Consensus       201 ~~~~~~d~vl~~~~~--~~~~~~~~~l~~--~g~~v~~g~~  237 (320)
T cd05286         201 TGGRGVDVVYDGVGK--DTFEGSLDSLRP--RGTLVSFGNA  237 (320)
T ss_pred             cCCCCeeEEEECCCc--HhHHHHHHhhcc--CcEEEEEecC
Confidence            444468999999874  234444555544  3578887654

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.94  E-value=0.064  Score=47.07  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=64.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      ...+|+|.    ||+|.+|..+++.+...|.+|+++++.+++.+.+.+           .++. ++..+    .+.+.+.
T Consensus       140 ~g~~vlI~----g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~  204 (327)
T PRK10754        140 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-----------AGAWQVINYREENIVERVKEI  204 (327)
T ss_pred             CCCEEEEE----eCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-----------CCCCEEEcCCCCcHHHHHHHH
Confidence            45799999    999999999999999999999999887654332211           1111 22122    3445555


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|.++++.+.  ......++.++.  .++||.++...
T Consensus       205 ~~~~~~d~vl~~~~~--~~~~~~~~~l~~--~g~~v~~g~~~  242 (327)
T PRK10754        205 TGGKKVRVVYDSVGK--DTWEASLDCLQR--RGLMVSFGNAS  242 (327)
T ss_pred             cCCCCeEEEEECCcH--HHHHHHHHHhcc--CCEEEEEccCC
Confidence            555568999999874  234445555544  34888887543

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.94  E-value=0.037  Score=47.69  Aligned_cols=100  Identities=19%  Similarity=0.236  Sum_probs=62.2

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |.|+    ||+|.+|..++..|+..|    .+|++++++++.++..... ..++.... ...++...+  ++.+.+++  
T Consensus         1 I~II----GagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~d-l~~~~~~~-~~~~i~~~~--d~~~~~~~--   70 (263)
T cd00650           1 IAVI----GAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMD-LQDAVEPL-ADIKVSITD--DPYEAFKD--   70 (263)
T ss_pred             CEEE----CCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHH-HHHhhhhc-cCcEEEECC--chHHHhCC--
Confidence            5689    988999999999999988    7999999987655432211 01111111 122322222  34555666  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      .|+||.+++              .|....+.+++.+++.... .+|.+|
T Consensus        71 aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          71 ADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            699999887              2455677777777775533 344443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN00203 glutamyl-tRNA reductase

Probab=95.88  E-value=0.031  Score=53.02  Aligned_cols=73  Identities=18%  Similarity=0.359  Sum_probs=52.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..++|+|+    |+ |.+|+.+++.|...|. +|+++.|+.+....+...        . .+..+...+.+++.+++.+ 
T Consensus       265 ~~kkVlVI----GA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~--------~-~g~~i~~~~~~dl~~al~~-  329 (519)
T PLN00203        265 ASARVLVI----GA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREE--------F-PDVEIIYKPLDEMLACAAE-  329 (519)
T ss_pred             CCCEEEEE----eC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH--------h-CCCceEeecHhhHHHHHhc-
Confidence            36899999    65 9999999999999996 799999988665543211        0 1222333455566777766 


Q ss_pred             cccEEEeCCC
Q 025587          152 TFDVVLDNNG  161 (250)
Q Consensus       152 ~~d~Vi~~ag  161 (250)
                       .|+||.+.+
T Consensus       330 -aDVVIsAT~  338 (519)
T PLN00203        330 -ADVVFTSTS  338 (519)
T ss_pred             -CCEEEEccC
Confidence             699998876

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.87  E-value=0.024  Score=53.53  Aligned_cols=105  Identities=20%  Similarity=0.246  Sum_probs=60.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC------CCCcccc--hhcCC-ceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------PFNRFNE--IVSAG-GKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~------~~~~~~~--~~~~~-v~~v~~D~~~l  144 (250)
                      .++|-|+     |.|.+|..++..|++.|++|++.+++++..+.+...      ....+..  ....+ +.  .  .+++
T Consensus         4 i~kIavI-----G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~--~--~~~~   74 (495)
T PRK07531          4 IMKAACI-----GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLT--F--CASL   74 (495)
T ss_pred             cCEEEEE-----CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceE--e--eCCH
Confidence            3589999     579999999999999999999999987655432100      0000000  00001 11  1  1234


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEEEcCcc
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFISSAG  189 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~iSS~~  189 (250)
                      .+++++  .|+|+.+..-+.+....++..+.+ ...+.+|-.||.+
T Consensus        75 ~ea~~~--aD~Vieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTsg  118 (495)
T PRK07531         75 AEAVAG--ADWIQESVPERLDLKRRVLAEIDAAARPDALIGSSTSG  118 (495)
T ss_pred             HHHhcC--CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence            455666  699998877665544545443333 2223345444433

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.86  E-value=0.0085  Score=52.44  Aligned_cols=41  Identities=24%  Similarity=0.345  Sum_probs=34.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKM  118 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~  118 (250)
                      ..++|+|+    | +|..|++++..|.+.|. +|++++|+.++.+.+
T Consensus       126 ~~k~vlIl----G-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQL----G-AGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEE----C-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            45799999    5 68899999999999996 799999987666544

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.84  E-value=0.0098  Score=52.46  Aligned_cols=39  Identities=18%  Similarity=0.329  Sum_probs=33.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      .++|.|+    | .|.+|..++..|++.|++|++++++.+..+.
T Consensus         4 ~~~I~vI----G-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~   42 (311)
T PRK06130          4 IQNLAII----G-AGTMGSGIAALFARKGLQVVLIDVMEGALER   42 (311)
T ss_pred             ccEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            3689999    5 6999999999999999999999998755443

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=95.84  E-value=0.18  Score=42.56  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=49.4

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCCC---ccccCCCCCCCcccchhcC-CceEEeCCHHHHHh
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDE---NSDKMKKPPFNRFNEIVSA-GGKTVWGDPAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~~---~~~~~~~~~~~~~~~~~~~-~v~~v~~D~~~l~~  146 (250)
                      .+|++||+    |-  .--|++.+++.|.++|.++.....++.   ..+++.++       +... -++++..|.+++++
T Consensus         5 ~GK~~lI~----Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~-------~~s~~v~~cDV~~d~~i~~   73 (259)
T COG0623           5 EGKRILIM----GVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEE-------LGSDLVLPCDVTNDESIDA   73 (259)
T ss_pred             CCceEEEE----EecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhh-------ccCCeEEecCCCCHHHHHH
Confidence            46899999    64  467999999999999999988877651   12221111       0000 02233334566666


Q ss_pred             hhcC-----CcccEEEeCCC
Q 025587          147 VVGG-----VTFDVVLDNNG  161 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag  161 (250)
                      ++..     ..+|.++|+.+
T Consensus        74 ~f~~i~~~~g~lD~lVHsIa   93 (259)
T COG0623          74 LFATIKKKWGKLDGLVHSIA   93 (259)
T ss_pred             HHHHHHHhhCcccEEEEEec
Confidence            5542     14899999988

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.83  E-value=0.051  Score=47.45  Aligned_cols=103  Identities=19%  Similarity=0.229  Sum_probs=63.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEeC-CHHHHHhhh--
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNVV--  148 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~~-D~~~l~~~l--  148 (250)
                      +|.|+     |.|.+|..+++.|++.||+|++.+|+++..+.+.+....   ...+ +...++.++.. |...+..++  
T Consensus         1 ~IgvI-----G~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~   75 (291)
T TIGR01505         1 KVGFI-----GLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFG   75 (291)
T ss_pred             CEEEE-----EecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcC
Confidence            47889     589999999999999999999999987655443222111   1111 12333333322 333444332  


Q ss_pred             -----cCCc-ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          149 -----GGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       149 -----~~~~-~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                           .... -..|+|+.......+..+.+.+++.|+ +|+.
T Consensus        76 ~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~-~~~~  116 (291)
T TIGR01505        76 ENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGI-DYLD  116 (291)
T ss_pred             cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-CEEe
Confidence                 1111 246778777777777888888877664 4443

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.83  E-value=0.099  Score=46.04  Aligned_cols=32  Identities=34%  Similarity=0.691  Sum_probs=27.2

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~  112 (250)
                      +|||+     |.|.+|.++++.|+..| -++++++.+.
T Consensus         1 kVLIv-----GaGGLGs~vA~~La~aGVg~ItlvD~D~   33 (307)
T cd01486           1 KCLLL-----GAGTLGCNVARNLLGWGVRHITFVDSGK   33 (307)
T ss_pred             CEEEE-----CCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            58999     57999999999999999 5688887654

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=95.83  E-value=0.05  Score=50.97  Aligned_cols=102  Identities=19%  Similarity=0.228  Sum_probs=63.6

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--------CCCcccchh----cCCceEEe-CCHHH
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--------PFNRFNEIV----SAGGKTVW-GDPAE  143 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--------~~~~~~~~~----~~~v~~v~-~D~~~  143 (250)
                      |-|+     |.|-+|..+++.|+++||+|++.+|++++.+.+.+.        ......++.    ..++.++. .+.+.
T Consensus         2 IG~I-----GLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~   76 (467)
T TIGR00873         2 IGVI-----GLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAP   76 (467)
T ss_pred             EEEE-----eeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHH
Confidence            6678     689999999999999999999999988766544322        111111211    12333222 22112


Q ss_pred             H----HhhhcC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          144 V----GNVVGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       144 l----~~~l~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      +    ..++.. ..=|+||++.......+....+.+++.|+ +||=
T Consensus        77 v~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi-~fvd  121 (467)
T TIGR00873        77 VDAVINQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGI-LFVG  121 (467)
T ss_pred             HHHHHHHHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCC-EEEc
Confidence            2    222221 12378999887788888888888887776 5553

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.80  E-value=0.015  Score=50.40  Aligned_cols=40  Identities=23%  Similarity=0.281  Sum_probs=34.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ..++|+|+    |+ |.+|+.++..|++.|++|++++|+.++.+.
T Consensus       116 ~~k~vlii----Ga-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~  155 (270)
T TIGR00507       116 PNQRVLII----GA-GGAARAVALPLLKADCNVIIANRTVSKAEE  155 (270)
T ss_pred             cCCEEEEE----cC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            36789999    76 899999999999999999999998765543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02494 adenosylhomocysteinase

Probab=95.79  E-value=0.037  Score=51.60  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=32.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      .+++|+|+     |.|.||+.+++.+...|.+|+++.+++..
T Consensus       253 aGKtVvVi-----GyG~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        253 AGKVAVIC-----GYGDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             CCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            46899999     58999999999999999999999887643

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.78  E-value=0.12  Score=37.93  Aligned_cols=87  Identities=22%  Similarity=0.299  Sum_probs=57.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++++|||+    || |-+|..-++.|++.|.+|++++...+..               ...+++...+.   .+.+.+  
T Consensus         6 ~~~~vlVv----Gg-G~va~~k~~~Ll~~gA~v~vis~~~~~~---------------~~~i~~~~~~~---~~~l~~--   60 (103)
T PF13241_consen    6 KGKRVLVV----GG-GPVAARKARLLLEAGAKVTVISPEIEFS---------------EGLIQLIRREF---EEDLDG--   60 (103)
T ss_dssp             TT-EEEEE----EE-SHHHHHHHHHHCCCTBEEEEEESSEHHH---------------HTSCEEEESS----GGGCTT--
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEECCchhhh---------------hhHHHHHhhhH---HHHHhh--
Confidence            56899999    65 9999999999999999999999774100               12233332222   233555  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+.||-+. -+......+.+.|++.++  ++++..
T Consensus        61 ~~lV~~at-~d~~~n~~i~~~a~~~~i--~vn~~D   92 (103)
T PF13241_consen   61 ADLVFAAT-DDPELNEAIYADARARGI--LVNVVD   92 (103)
T ss_dssp             ESEEEE-S-S-HHHHHHHHHHHHHTTS--EEEETT
T ss_pred             heEEEecC-CCHHHHHHHHHHHhhCCE--EEEECC
Confidence            68777444 355566778888888665  666654

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.77  E-value=0.058  Score=46.67  Aligned_cols=96  Identities=21%  Similarity=0.297  Sum_probs=59.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCceEEe-C-C-HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-G-D-PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~-D-~~~l~~~l  148 (250)
                      ...+|||.    |+ |.+|...++.+...|.+ |+++++++++.+..+           ..+...+. . + .+.+.+..
T Consensus       120 ~g~~VlV~----G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~-----------~~Ga~~~i~~~~~~~~~~~~~  183 (280)
T TIGR03366       120 KGRRVLVV----GA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELAL-----------SFGATALAEPEVLAERQGGLQ  183 (280)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-----------HcCCcEecCchhhHHHHHHHh
Confidence            46799999    86 88999999988888986 877776654433211           11222111 1 1 23334433


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+..+|+||++.|.. ......++.++..  .+++.++.
T Consensus       184 ~~~g~d~vid~~G~~-~~~~~~~~~l~~~--G~iv~~G~  219 (280)
T TIGR03366       184 NGRGVDVALEFSGAT-AAVRACLESLDVG--GTAVLAGS  219 (280)
T ss_pred             CCCCCCEEEECCCCh-HHHHHHHHHhcCC--CEEEEecc
Confidence            444589999998743 2344455555543  47888775

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.77  E-value=0.056  Score=47.39  Aligned_cols=98  Identities=12%  Similarity=0.127  Sum_probs=62.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-C---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-D---~~~l~~~  147 (250)
                      .+.+|||.    |++|.+|..+++.+.+.|.+|++++++++..+.+.+.          .++. ++.. +   .+.+.+.
T Consensus       145 ~~~~vlI~----g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~v~~~  210 (329)
T cd05288         145 PGETVVVS----AAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE----------LGFDAAINYKTPDLAEALKEA  210 (329)
T ss_pred             CCCEEEEe----cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh----------cCCceEEecCChhHHHHHHHh
Confidence            35799999    9999999999999999999999998876544322110          1111 2222 2   2233333


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .. ..+|+++++.|.  ......++.++..  ++||.++...
T Consensus       211 ~~-~~~d~vi~~~g~--~~~~~~~~~l~~~--G~~v~~g~~~  247 (329)
T cd05288         211 AP-DGIDVYFDNVGG--EILDAALTLLNKG--GRIALCGAIS  247 (329)
T ss_pred             cc-CCceEEEEcchH--HHHHHHHHhcCCC--ceEEEEeecc
Confidence            32 358999999874  3444455555443  4788887644

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.76  E-value=0.13  Score=46.26  Aligned_cols=94  Identities=17%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh-CCCe---EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~---V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      .++|-|+    ||||++|+.+++.|.+ ...+   +..++.....-+.+         .+...++.+...|++++    .
T Consensus         5 ~~~VaIv----GATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~---------~~~~~~l~v~~~~~~~~----~   67 (347)
T PRK06728          5 GYHVAVV----GATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV---------QFKGREIIIQEAKINSF----E   67 (347)
T ss_pred             CCEEEEE----eCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe---------eeCCcceEEEeCCHHHh----c
Confidence            4689999    9999999999999984 6666   55665443211111         11122344444565443    3


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +  +|+|+-+++..  ..+.++..+.+.|. .+|=.|+..
T Consensus        68 ~--~Divf~a~~~~--~s~~~~~~~~~~G~-~VID~Ss~f  102 (347)
T PRK06728         68 G--VDIAFFSAGGE--VSRQFVNQAVSSGA-IVIDNTSEY  102 (347)
T ss_pred             C--CCEEEECCChH--HHHHHHHHHHHCCC-EEEECchhh
Confidence            3  79999988743  56666766666664 666666654

>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated

Probab=95.76  E-value=0.082  Score=49.11  Aligned_cols=96  Identities=10%  Similarity=0.107  Sum_probs=57.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-c--CCCCCCCcccchhcCCce-EEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-K--MKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~--~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l  148 (250)
                      |+|+|||.     |.|.+|..+++.+.+.|++|++++...+... .  +.+..    - ....... -...|.+.+.++.
T Consensus         1 ~~k~iLi~-----g~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~ad~~----~-~~~~~~~~~~y~d~~~l~~~a   70 (451)
T PRK08591          1 MFDKILIA-----NRGEIALRIIRACKELGIKTVAVHSTADRDALHVQLADEA----V-CIGPAPSKKSYLNIPAIISAA   70 (451)
T ss_pred             CcceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhHCCEE----E-EeCCCCcccccCCHHHHHHHH
Confidence            36899999     4799999999999999999999866543211 0  01000    0 0000000 0122566777776


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                      ....+|+|+-..+...+.. .+...+.+.|+
T Consensus        71 ~~~~id~I~p~~~~~~e~~-~~~~~~e~~gi  100 (451)
T PRK08591         71 EITGADAIHPGYGFLSENA-DFAEICEDSGF  100 (451)
T ss_pred             HHhCCCEEEECCCccccCH-HHHHHHHHCCC
Confidence            6667999987654322211 35666667775

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.76  E-value=0.062  Score=47.81  Aligned_cols=101  Identities=17%  Similarity=0.229  Sum_probs=54.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCe---EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHE---VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|-|+    |+||.+|+.+++.|.++...   +.++...++.-.+  -..|....    ..+.-...|..++.     
T Consensus         1 ~~~Vavv----GATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~--~~~f~~~~----~~v~~~~~~~~~~~-----   65 (334)
T COG0136           1 KLNVAVL----GATGAVGQVLLELLEERHFPFEELVLLASARSAGKK--YIEFGGKS----IGVPEDAADEFVFS-----   65 (334)
T ss_pred             CcEEEEE----eccchHHHHHHHHHHhcCCCcceEEEEecccccCCc--cccccCcc----ccCccccccccccc-----
Confidence            3689999    99999999999999997532   3344332211110  00000000    00110001222222     


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~  195 (250)
                       ++|+|+.++|-++.  +.+.+.+.++|.   +.++..+.|-..+
T Consensus        66 -~~Divf~~ag~~~s--~~~~p~~~~~G~---~VIdnsSa~Rm~~  104 (334)
T COG0136          66 -DVDIVFFAAGGSVS--KEVEPKAAEAGC---VVIDNSSAFRMDP  104 (334)
T ss_pred             -cCCEEEEeCchHHH--HHHHHHHHHcCC---EEEeCCcccccCC
Confidence             47999999985543  777777878773   4445444444433

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.76  E-value=0.074  Score=49.10  Aligned_cols=40  Identities=15%  Similarity=0.272  Sum_probs=35.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      .++|.|+     |.|++|..++..|++.||+|++++++++..+.+
T Consensus         3 ~~kI~VI-----GlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVI-----GLGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEE-----CcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            3789999     589999999999999999999999988766643

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.75  E-value=0.041  Score=50.20  Aligned_cols=103  Identities=10%  Similarity=0.010  Sum_probs=60.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-e----EEE--E--EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-E----VTI--M--TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~----V~~--l--~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l  144 (250)
                      .-+|.|+    |++|.+|..++-.|+..|. .    |.+  +  +++.+..+...-.-.+-...+. .++.+..+|.++ 
T Consensus        44 p~KV~II----GAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~~~y~~-  117 (387)
T TIGR01757        44 TVNVAVS----GAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGIDPYEV-  117 (387)
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEecCCHHH-
Confidence            4699999    9999999999999998862 2    333  3  6655544322110000000001 123323344444 


Q ss_pred             HhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC-CC-EEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG-VK-QFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~-~~-~~v~iSS  187 (250)
                         +++  .|+||-+||              .|....+.+.+.++++. .. .+|.+|-
T Consensus       118 ---~kd--aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       118 ---FED--ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             ---hCC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence               444  599999999              35666788888887733 33 4555553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK05678 succinyl-CoA synthetase subunit alpha; Validated

Probab=95.75  E-value=0.22  Score=43.77  Aligned_cols=115  Identities=17%  Similarity=0.228  Sum_probs=73.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEE-EEEcC--CCccccCCCCCCCcccchhc---CCceEEeCC----HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT-IMTVG--DENSDKMKKPPFNRFNEIVS---AGGKTVWGD----PA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~-~l~R~--~~~~~~~~~~~~~~~~~~~~---~~v~~v~~D----~~  142 (250)
                      ++.+|+|.    |-||-+|..+.+.|++.|++++ .+..+  .+....++  -+..+.++..   .++-++..-    ++
T Consensus         7 ~~~~~~v~----~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~v~G~~--~y~sv~dlp~~~~~DlAvi~vp~~~v~~   80 (291)
T PRK05678          7 KDTKVIVQ----GITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTVLGLP--VFNTVAEAVEATGANASVIYVPPPFAAD   80 (291)
T ss_pred             CCCeEEEe----CCCchHHHHHHHHHHHCCCCEEEEECCCCCCCeEeCee--ccCCHHHHhhccCCCEEEEEcCHHHHHH
Confidence            45799999    9999999999999999888633 34433  22222221  1223333333   244444444    45


Q ss_pred             HHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      .++++.+..---+||..+|...+..+.+++.+++.|+ |++=-.+.+++.+.
T Consensus        81 ~l~e~~~~gvk~avI~s~Gf~~~~~~~l~~~a~~~gi-rvlGPNc~Gi~~~~  131 (291)
T PRK05678         81 AILEAIDAGIDLIVCITEGIPVLDMLEVKAYLERKKT-RLIGPNCPGIITPG  131 (291)
T ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC-EEECCCCCcccccc
Confidence            5555554322245777788766656689999999887 88877777776654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.74  E-value=0.015  Score=50.84  Aligned_cols=76  Identities=8%  Similarity=0.011  Sum_probs=49.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..++|+|+    | +|..|++++..|.+.|. +|+++.|+.++.+.+.+.    +..  ...+.. ....+++...+.+ 
T Consensus       124 ~~k~vlvl----G-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~----~~~--~~~~~~-~~~~~~~~~~~~~-  190 (282)
T TIGR01809       124 AGFRGLVI----G-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDL----GVQ--VGVITR-LEGDSGGLAIEKA-  190 (282)
T ss_pred             CCceEEEE----c-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHH----hhh--cCccee-ccchhhhhhcccC-
Confidence            46799999    5 69999999999999995 799999988766654321    000  001111 1112344444444 


Q ss_pred             cccEEEeCCCc
Q 025587          152 TFDVVLDNNGK  162 (250)
Q Consensus       152 ~~d~Vi~~ag~  162 (250)
                       .|+||++...
T Consensus       191 -~DiVInaTp~  200 (282)
T TIGR01809       191 -AEVLVSTVPA  200 (282)
T ss_pred             -CCEEEECCCC
Confidence             7999999764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=95.74  E-value=0.054  Score=47.32  Aligned_cols=98  Identities=20%  Similarity=0.205  Sum_probs=62.8

Q ss_pred             cchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEe-CCHHHHHhhh-------cCC-c
Q 025587           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVW-GDPAEVGNVV-------GGV-T  152 (250)
Q Consensus        86 gtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~-~D~~~l~~~l-------~~~-~  152 (250)
                      |.|.+|..+++.|++.||+|++.+|+++..+.+.+....   ...+ ....++.++. -+.+.+.+++       ... .
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~~~   82 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKVAK   82 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcCCC
Confidence            689999999999999999999999987655443322111   1111 1223333222 2334444444       111 1


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      -..||++.++....++.+.+.+++.|+ +||-
T Consensus        83 g~~vid~st~~p~~~~~~~~~~~~~g~-~~vd  113 (288)
T TIGR01692        83 GSLLIDCSTIDPDSARKLAELAAAHGA-VFMD  113 (288)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHcCC-cEEE
Confidence            257889999999999999999888776 3444

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.73  E-value=0.048  Score=48.30  Aligned_cols=72  Identities=31%  Similarity=0.446  Sum_probs=51.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..++|+|+    |+ |.+|..+++.|...| .+|++++|+.++...+.+.          .+...  .+.+++.+.+.. 
T Consensus       177 ~~~~V~Vi----Ga-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~----------~g~~~--~~~~~~~~~l~~-  238 (311)
T cd05213         177 KGKKVLVI----GA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKE----------LGGNA--VPLDELLELLNE-  238 (311)
T ss_pred             cCCEEEEE----Cc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH----------cCCeE--EeHHHHHHHHhc-
Confidence            46899999    65 999999999999876 7899999987655433211          11222  244566777766 


Q ss_pred             cccEEEeCCCcC
Q 025587          152 TFDVVLDNNGKN  163 (250)
Q Consensus       152 ~~d~Vi~~ag~~  163 (250)
                       .|+||.+.+..
T Consensus       239 -aDvVi~at~~~  249 (311)
T cd05213         239 -ADVVISATGAP  249 (311)
T ss_pred             -CCEEEECCCCC
Confidence             69999998843

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.73  E-value=0.14  Score=43.56  Aligned_cols=109  Identities=17%  Similarity=0.178  Sum_probs=65.0

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCC--ceEEe
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAG--GKTVW  138 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~--v~~v~  138 (250)
                      +|||+    | .|.+|.++++.|+..| -+++++|.+.=...++..+-+.+..+              ...++  ++.+.
T Consensus         1 kVlvv----G-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~   75 (234)
T cd01484           1 KVLLV----G-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQ   75 (234)
T ss_pred             CEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEe
Confidence            58999    5 7999999999999999 56888887652222222211111000              01223  33333


Q ss_pred             CCH---HHH-HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          139 GDP---AEV-GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       139 ~D~---~~l-~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      .+.   +++ .+.+++  +|+||++.. |+..-+.+-+.|.+.++ .+|..++.+.+|.
T Consensus        76 ~~i~~~~~~~~~f~~~--~DvVi~a~D-n~~aR~~ln~~c~~~~i-plI~~g~~G~~G~  130 (234)
T cd01484          76 NKVGPEQDFNDTFFEQ--FHIIVNALD-NIIARRYVNGMLIFLIV-PLIESGTEGFKGN  130 (234)
T ss_pred             ccCChhhhchHHHHhC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEcccCCceE
Confidence            332   222 344555  799998865 56655566677777765 6777777665553

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=95.72  E-value=0.022  Score=49.78  Aligned_cols=37  Identities=32%  Similarity=0.451  Sum_probs=33.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      ++|.|+    | .|.+|..++..|++.|++|++++++++..+
T Consensus         4 ~~I~Vi----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~   40 (291)
T PRK06035          4 KVIGVV----G-SGVMGQGIAQVFARTGYDVTIVDVSEEILK   40 (291)
T ss_pred             cEEEEE----C-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            689999    5 699999999999999999999999876554

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.72  E-value=0.16  Score=45.02  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=32.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ...++|.|+     |.|.||+.+++.|...|++|++.+|..+
T Consensus       134 l~g~tvgIv-----G~G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        134 REDFTIGIL-----GAGVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             cCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            356899999     6999999999999999999999998653

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.71  E-value=0.053  Score=48.41  Aligned_cols=97  Identities=13%  Similarity=0.263  Sum_probs=60.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE-EeC---CHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG---DPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~---D~~~l~~~l  148 (250)
                      ...+|+|.    |+ |.+|..+++.+...|.+|+++++++++.+.+.+           .+++. +..   |.+++.+.+
T Consensus       166 ~g~~VlV~----G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~-----------~Ga~~~i~~~~~~~~~~~~~~  229 (349)
T TIGR03201       166 KGDLVIVI----GA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKG-----------FGADLTLNPKDKSAREVKKLI  229 (349)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-----------hCCceEecCccccHHHHHHHH
Confidence            35799999    98 999999999999999999999887765443211           12221 111   122333332


Q ss_pred             ----cCCccc----EEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 ----GGVTFD----VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ----~~~~~d----~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                          .+..+|    .|+++.|.. ......++.++..  ++++.++..
T Consensus       230 ~~~t~~~g~d~~~d~v~d~~g~~-~~~~~~~~~l~~~--G~iv~~G~~  274 (349)
T TIGR03201       230 KAFAKARGLRSTGWKIFECSGSK-PGQESALSLLSHG--GTLVVVGYT  274 (349)
T ss_pred             HhhcccCCCCCCcCEEEECCCCh-HHHHHHHHHHhcC--CeEEEECcC
Confidence                222344    899998842 3344456666553  578887753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.69  E-value=0.094  Score=45.24  Aligned_cols=96  Identities=21%  Similarity=0.241  Sum_probs=62.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC---C-HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---D-PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~---D-~~~l~~~  147 (250)
                      .+.+|+|+    |++|.+|..+++.+...|++|+++++..+..+.+.+.           ++. ++..   | .+.+.+.
T Consensus       139 ~~~~vli~----g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~i~~~  203 (323)
T cd08241         139 PGETVLVL----GAAGGVGLAAVQLAKALGARVIAAASSEEKLALARAL-----------GADHVIDYRDPDLRERVKAL  203 (323)
T ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHc-----------CCceeeecCCccHHHHHHHH
Confidence            35799999    9999999999999999999999998876543322111           111 1111   1 3445554


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ..+..+|.++++.|.  ......++.++..  ++++.++.
T Consensus       204 ~~~~~~d~v~~~~g~--~~~~~~~~~~~~~--g~~v~~~~  239 (323)
T cd08241         204 TGGRGVDVVYDPVGG--DVFEASLRSLAWG--GRLLVIGF  239 (323)
T ss_pred             cCCCCcEEEEECccH--HHHHHHHHhhccC--CEEEEEcc
Confidence            454468999999874  3334445555443  47887765

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=95.65  E-value=0.25  Score=43.27  Aligned_cols=117  Identities=15%  Similarity=0.250  Sum_probs=72.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC-CCCCCCcccchhcC---CceEEeCC----HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSA---GGKTVWGD----PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~~~~~~~~---~v~~v~~D----~~~l  144 (250)
                      ++.+|+|-    |-||.+|+.+.+.|+..|++++.-....+..+.+ --+-+..+.++...   ++-++..-    ++.+
T Consensus         5 ~~~~~~~~----g~~~~~~~~~~~~~~~~g~~~v~~V~p~~~~~~v~G~~~y~sv~dlp~~~~~Dlavi~vpa~~v~~~l   80 (286)
T TIGR01019         5 KDTKVIVQ----GITGSQGSFHTEQMLAYGTNIVGGVTPGKGGTTVLGLPVFDSVKEAVEETGANASVIFVPAPFAADAI   80 (286)
T ss_pred             CCCcEEEe----cCCcHHHHHHHHHHHhCCCCEEEEECCCCCcceecCeeccCCHHHHhhccCCCEEEEecCHHHHHHHH
Confidence            35689999    9999999999999999998855433322112211 11112233333332   44444444    4455


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      +++.+..---+||-.+|.-....+.+++.++++|+ |++=-.+.+++.+.
T Consensus        81 ~e~~~~Gvk~avIis~Gf~e~~~~~l~~~a~~~gi-rilGPNc~Giin~~  129 (286)
T TIGR01019        81 FEAIDAGIELIVCITEGIPVHDMLKVKRYMEESGT-RLIGPNCPGIITPG  129 (286)
T ss_pred             HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC-EEECCCCceEEccc
Confidence            55544321245666777655456789999999887 78877777777654

ATP citrate lyases appear to form an outgroup.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.64  E-value=0.054  Score=48.05  Aligned_cols=98  Identities=19%  Similarity=0.222  Sum_probs=60.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEe-CCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVW-GDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~-~D~~~l~~~l  148 (250)
                      .+||.|+    |+ |.+|..++..|+..|  .++++++.+++..+....    .+....  .....+.. +|.++    +
T Consensus         3 ~~Ki~Ii----Ga-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~----Dl~~~~~~~~~~~v~~~~dy~~----~   69 (312)
T cd05293           3 RNKVTVV----GV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAM----DLQHGSAFLKNPKIEADKDYSV----T   69 (312)
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHH----HHHHhhccCCCCEEEECCCHHH----h
Confidence            4689999    85 999999999998887  579999987754332110    000000  01113332 56654    4


Q ss_pred             cCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      ++  .|+||-++|.              |....+.+.+.+++.+.+ .+|.+|
T Consensus        70 ~~--adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          70 AN--SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            44  5999999982              455566777777776543 344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.62  E-value=0.085  Score=47.57  Aligned_cols=96  Identities=16%  Similarity=0.243  Sum_probs=60.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~  146 (250)
                      ...+|||.    |+ |.+|...++.+...|. +|+++++++++.+...           ..++. ++..+    .+.+.+
T Consensus       191 ~g~~VlV~----G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-----------~~Ga~~~i~~~~~~~~~~i~~  254 (371)
T cd08281         191 PGQSVAVV----GL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-----------ELGATATVNAGDPNAVEQVRE  254 (371)
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-----------HcCCceEeCCCchhHHHHHHH
Confidence            45799999    85 8999999998888898 5888888775544221           11222 22222    233444


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ...+ .+|+||++.|.. ......++.++..  .++|.++..
T Consensus       255 ~~~~-g~d~vid~~G~~-~~~~~~~~~l~~~--G~iv~~G~~  292 (371)
T cd08281         255 LTGG-GVDYAFEMAGSV-PALETAYEITRRG--GTTVTAGLP  292 (371)
T ss_pred             HhCC-CCCEEEECCCCh-HHHHHHHHHHhcC--CEEEEEccC
Confidence            4334 589999998742 3344455666553  478877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.62  E-value=0.042  Score=46.17  Aligned_cols=38  Identities=29%  Similarity=0.401  Sum_probs=27.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC--CCe-EEEEEcCCCcccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHE-VTIMTVGDENSDK  117 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~-V~~l~R~~~~~~~  117 (250)
                      ++|.|+     |+|.||..+++.+.+.  +.+ |.+.+|+.++..+
T Consensus         1 l~vgiV-----GcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~   41 (255)
T COG1712           1 LKVGIV-----GCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKE   41 (255)
T ss_pred             CeEEEE-----eccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHH
Confidence            468899     6999999999966544  355 5666777766653

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.61  E-value=0.018  Score=47.82  Aligned_cols=35  Identities=34%  Similarity=0.407  Sum_probs=29.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      |++.|.     |+|.||..++++|.+.||+|++..|+.++
T Consensus         2 ~~~~i~-----GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           2 MIIAII-----GTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             cEEEEe-----ccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            556655     79999999999999999999999766543

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=95.60  E-value=0.12  Score=44.02  Aligned_cols=102  Identities=12%  Similarity=0.151  Sum_probs=59.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHH-----HHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe------CCH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYL-----AKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW------GDP  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l-----~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~------~D~  141 (250)
                      |++.++|.    |+-|++|.-.     +..|.++|.+|.+++-++....-      ..+..+....+++..      .+.
T Consensus         1 m~~i~~i~----~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n~~~------~~~~~l~~~~~~i~~~~~i~~r~f   70 (241)
T PRK13886          1 MAKIHMVL----QGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVNATF------EGYKALNVRRLNIMDGDEINTRNF   70 (241)
T ss_pred             CCeEEEEe----cCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCCchh------hhHHhcCCcceecccCCccchhhH
Confidence            45677888    8888888754     67777889999999887644321      111111111122211      124


Q ss_pred             HHHHhhhcCCcccEEEeCCCcCHHhH------HHHHHHHHhCCCCEEEE
Q 025587          142 AEVGNVVGGVTFDVVLDNNGKNLDAV------RPVADWAKSSGVKQFLF  184 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag~~~~~~------~~ll~~~~~~~~~~~v~  184 (250)
                      +.+.+.+....-|+||++.+.+..+.      -.+.+.+.+.|..-+++
T Consensus        71 D~Lve~i~~~~~dvIIDngAs~~~~l~~yl~~n~l~~ll~e~g~~lvvh  119 (241)
T PRK13886         71 DALVEMIASTEGDVIIDNGASSFVPLSHYLISNQVPALLQDMGHELVVH  119 (241)
T ss_pred             HHHHHHHhccCCCEEEECCCcchHHHHHHHHhCcHHHHHHHCCceEEEE
Confidence            44444444334689999988665543      34567777777755555

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=95.60  E-value=0.069  Score=47.24  Aligned_cols=101  Identities=17%  Similarity=0.189  Sum_probs=59.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~~  152 (250)
                      ++|-|+    | +|.+|..++..|+..|+ +|++++..++...... .+...-.........+. ..|.++    +.+  
T Consensus         2 ~KV~VI----G-aG~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a-~d~~~~~~~~~~~~~i~~t~d~~~----~~~--   69 (305)
T TIGR01763         2 KKISVI----G-AGFVGATTAFRLAEKELADLVLLDVVEGIPQGKA-LDMYEASPVGGFDTKVTGTNNYAD----TAN--   69 (305)
T ss_pred             CEEEEE----C-cCHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHH-HhhhhhhhccCCCcEEEecCCHHH----hCC--
Confidence            589999    7 49999999999999886 8999998654322110 00000000000111222 245443    344  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      .|+||-++|              .|......+++.+.+.+.. .+|.+|-
T Consensus        70 aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        70 SDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            699999998              2455666677766665433 4555553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.58  E-value=0.074  Score=46.90  Aligned_cols=39  Identities=28%  Similarity=0.422  Sum_probs=33.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      |+|.|+    | .|.+|..++..|++.|++|++++|+++..+.+
T Consensus         2 mkI~ii----G-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~   40 (325)
T PRK00094          2 MKIAVL----G-AGSWGTALAIVLARNGHDVTLWARDPEQAAEI   40 (325)
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            689999    6 69999999999999999999999987555443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.58  E-value=0.08  Score=44.06  Aligned_cols=87  Identities=22%  Similarity=0.254  Sum_probs=58.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .+++|||+    | .|.+|..-++.|++.|.+|++++.... ....+          ....+++++..+.+  ...+.+ 
T Consensus         8 ~gk~vlVv----G-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l----------~~~~~i~~~~~~~~--~~dl~~-   69 (205)
T TIGR01470         8 EGRAVLVV----G-GGDVALRKARLLLKAGAQLRVIAEELESELTLL----------AEQGGITWLARCFD--ADILEG-   69 (205)
T ss_pred             CCCeEEEE----C-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH----------HHcCCEEEEeCCCC--HHHhCC-
Confidence            46899999    5 599999999999999999999986542 11111          11225666666633  223455 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~  179 (250)
                       .+.||-+.+. ......+...|++.++
T Consensus        70 -~~lVi~at~d-~~ln~~i~~~a~~~~i   95 (205)
T TIGR01470        70 -AFLVIAATDD-EELNRRVAHAARARGV   95 (205)
T ss_pred             -cEEEEECCCC-HHHHHHHHHHHHHcCC
Confidence             6888866553 3455678888887654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=95.54  E-value=0.024  Score=53.66  Aligned_cols=38  Identities=21%  Similarity=0.351  Sum_probs=33.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      -++|.|+    | .|.+|..++..|++.||+|++.+|+++..+
T Consensus         5 ~~kV~VI----G-aG~MG~gIA~~la~aG~~V~l~d~~~e~l~   42 (503)
T TIGR02279         5 VVTVAVI----G-AGAMGAGIAQVAASAGHQVLLYDIRAEALA   42 (503)
T ss_pred             ccEEEEE----C-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence            3679999    6 599999999999999999999999986654

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.53  E-value=0.015  Score=50.73  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=34.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKM  118 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~  118 (250)
                      .++|+|.    | .|+.+++++..|++.| .+|+++.|..++.+.+
T Consensus       126 ~~~vlil----G-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~L  166 (283)
T COG0169         126 GKRVLIL----G-AGGAARAVAFALAEAGAKRITVVNRTRERAEEL  166 (283)
T ss_pred             CCEEEEE----C-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            5889999    5 6999999999999999 6899999988766554

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.53  E-value=0.1  Score=45.68  Aligned_cols=111  Identities=11%  Similarity=0.116  Sum_probs=73.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-  150 (250)
                      .+.++|+|.    ||+|-+|+-+-+-..-.|..|+...-++|+.+-++..        .+-+..+..-++.++.++++. 
T Consensus       152 k~geTv~VS----aAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~--------~G~d~afNYK~e~~~~~aL~r~  219 (343)
T KOG1196|consen  152 KKGETVFVS----AASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTK--------FGFDDAFNYKEESDLSAALKRC  219 (343)
T ss_pred             CCCCEEEEe----eccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhc--------cCCccceeccCccCHHHHHHHh
Confidence            446899999    9999999988877777799999999888776644322        011111222233344444432 


Q ss_pred             --CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          151 --VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       151 --~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                        ..+|+-+++.|-+.  ...++..++.+  .|+++.+-++.|......+
T Consensus       220 ~P~GIDiYfeNVGG~~--lDavl~nM~~~--gri~~CG~ISqYN~~~~~~  265 (343)
T KOG1196|consen  220 FPEGIDIYFENVGGKM--LDAVLLNMNLH--GRIAVCGMISQYNLENPEG  265 (343)
T ss_pred             CCCcceEEEeccCcHH--HHHHHHhhhhc--cceEeeeeehhccccCCcc
Confidence              25899999988543  34455566554  4899999999887654433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	4e-12
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-10
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-10
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-10
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	9e-10
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-09
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-09
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-08
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-08
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-08
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-07
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-07
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-07
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	3e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-07
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-06
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	3e-06
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-06
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	5e-06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-05
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	5e-05
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	7e-05
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-04
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	8e-04

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 32/168 (19%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++                
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVLV---RDSSRLP--------SEGPRPA 48

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGKN---------LDAVRPVADWAKSSGVKQF 182
             V GD    A+V   V G   D V+   G            +  R +    K+ GV + 
Sbjct: 49  HVVVGDVLQAADVDKTVAGQ--DAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKV 106

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           +  +SA +     + P     V      H+++ K + E+   + +  P
Sbjct: 107 VACTSAFLLWDPTKVPPRLQAVTD---DHIRMHKVLRESGLKYVAVMP 151

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 32/183 (17%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            + KK++++    G    +G  L  E L  G EVT   V      K++        ++  
Sbjct: 2   EKVKKIVLI----GASGFVGSALLNEALNRGFEVTA-VVRHPEKIKIENEHL----KVKK 52

Query: 132 AGGKTVWGDPAEVGNVVGGVTFDVVL----------DNNGKNLDAVRPVADWAKSSGVKQ 181
           A          EV  V  G   D V+          D   + +     + D  K +GV +
Sbjct: 53  A----DVSSLDEVCEVCKGA--DAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNR 106

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPD-------AGHVQVEKYISENFSNWASFRPQYMI 234
           FL +  AG    A     ++   V  +        G   +   + E   +W  F P   +
Sbjct: 107 FLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADM 166

Query: 235 GSG 237
             G
Sbjct: 167 RPG 169

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 58.8 bits (142), Expect = 2e-10
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 19/173 (10%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
             + ++L++    G    IG ++AK  L  GH   ++      S   +K          +
Sbjct: 2   GSRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQL--LESFKA 55

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFISS 187
           +G   V G     A +   V  V  DVV+       +++   +    K  G  +  F S 
Sbjct: 56  SGANIVHGSIDDHASLVEAVKNV--DVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 113

Query: 188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGS 236
            G     D    VE      +    +V + I      +          Y + S
Sbjct: 114 FGN--DVDNVHAVEPAKSVFEV-KAKVRRAIEAEGIPYTYVSSNCFAGYFLRS 163

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 58.1 bits (140), Expect = 4e-10
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 19/180 (10%)

Query: 66  TVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR 125
           TV    + K +VLI     G    IG ++A   L +     I+      S          
Sbjct: 2   TVSPVPSPKGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSP----SKAKI 53

Query: 126 FNEIVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQ 181
           F  +   G   V+G       +  ++     D+V+    G+++     +    K+ G  +
Sbjct: 54  FKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIK 113

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSG 237
               S  G      +P       +       +V + + E+   +          +   + 
Sbjct: 114 RFLPSEFGHDVNRADPV---EPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNN 170

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 56.6 bits (136), Expect = 5e-10
 Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 21/172 (12%)

Query: 70  SAAEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNE 128
           S A    + I+    G    I   L   LL  +   +T+             P       
Sbjct: 1   SNAMYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGR---QLKTRIPP-----EI 48

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI 185
           I       + G    P  +   V     +VV     ++   +  +        +++ + +
Sbjct: 49  IDHERVTVIEGSFQNPGXLEQAVTNA--EVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106

Query: 186 SSAGIYKPADEPPHVEGDVVKPD---AGHVQVEKYISENFSNWASFRPQYMI 234
           S AG+                P     G  Q    + E+  N+   R  ++ 
Sbjct: 107 SMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLY 158

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 56.9 bits (137), Expect = 9e-10
 Identities = 31/179 (17%), Positives = 55/179 (30%), Gaps = 23/179 (12%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS 131
            +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K      F +   
Sbjct: 2   DKKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ--- 54

Query: 132 AGGKTVWGD---PAEVGNVVGGVTFDVVLD-----NNGKNLDAVRPVADWAKSSGVKQFL 183
            G K +         + + +  V  DVV+          ++     + +  K +G  +  
Sbjct: 55  LGAKLIEASLDDHQRLVDALKQV--DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSGN 238
             S  G+    D   H             +V + I      +          Y  GS  
Sbjct: 113 LPSEFGM--DPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLA 169

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ IV    G    +G  L K L  + +++          +++ +              K
Sbjct: 2   KIFIV----GSTGRVGKSLLKSLSTTDYQIYAGA---RKVEQVPQYN----------NVK 44

Query: 136 TVWGD----PAEVGNVVGGVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFL 183
            V  D    P E+   + G+  D +++ +G         +L     +   A+ + VK+F+
Sbjct: 45  AVHFDVDWTPEEMAKQLHGM--DAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFI 102

Query: 184 FISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS-NWASFRP 230
            +S+    +P          +          + Y+++  + ++   +P
Sbjct: 103 LLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQP 150

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 41/184 (22%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+LI      G   +G  LA+ L   GHEVT +                R  + + AG
Sbjct: 3   LSKILIA-----GCGDLGLELARRLTAQGHEVTGLR---------------RSAQPMPAG 42

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVL-----------DNNGKNLDAVRPVADWAKSSGV 179
            +T+  D   P  + ++V     ++++                 ++ +R      + + +
Sbjct: 43  VQTLIADVTRPDTLASIVHLRP-EILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL 101

Query: 180 KQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSNWASFRPQYMIG 235
           +   F+SS G+Y    E    E              ++ E  ++    +    R   + G
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA--YSSTILRFSGIYG 159

Query: 236 SGNN 239
            G  
Sbjct: 160 PGRL 163

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 19/175 (10%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
            +  +K++I     GG   IG ++ +  L   H   I                    E  
Sbjct: 1   GSHMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL--REEFR 54

Query: 131 SAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFIS 186
           S G   + G+     ++ +V+  V  D+V+       + +   + +  K++G  +    S
Sbjct: 55  SMGVTIIEGEMEEHEKMVSVLKQV--DIVISALPFPMISSQIHIINAIKAAGNIKRFLPS 112

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSG 237
             G  +   +P      V+        + + I      +          Y +   
Sbjct: 113 DFGCEEDRIKPLPPFESVL---EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYL 164

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 23/177 (12%), Positives = 49/177 (27%), Gaps = 31/177 (17%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ I+    G     G  + +E    GHEVT +     N+ K+ +               
Sbjct: 2   KIGII----GATGRAGSRILEEAKNRGHEVTAIV---RNAGKITQTH---------KDIN 45

Query: 136 TVWGD------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
            +  D             V    + +  D   K++ ++  +      +   + L +  A 
Sbjct: 46  ILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105

Query: 190 IYKPADEPPHVEGDVVKPDA---------GHVQVEKYISENFSNWASFRPQYMIGSG 237
             +  ++   +       +A                   +   +W    P  M   G
Sbjct: 106 SLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG 162

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 52.2 bits (125), Expect = 3e-08
 Identities = 21/161 (13%), Positives = 49/161 (30%), Gaps = 14/161 (8%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + K+LI+    G    IG ++    + +G+    +      +    +      +   S G
Sbjct: 2   ENKILIL----GPTGAIGRHIVWASIKAGNPTYALVR-KTITAANPETKEELIDNYQSLG 56

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLFISSAG 189
              + GD      +   +  V  D+V+       ++    +    K +G  +  F S  G
Sbjct: 57  VILLEGDINDHETLVKAIKQV--DIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFG 114

Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           +     +       V +       + + I      +     
Sbjct: 115 LD---VDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCC 152

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 30/146 (20%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
             K+ +  T  GG   +G Y+ + +   G+      +    S   K      +       
Sbjct: 2   SLKIAV--T--GGTGFLGQYVVESIKNDGNTP----IILTRSIGNKAINDYEYRV----- 48

Query: 134 GKTVWGDPAEVGNVVGGVTFDVV------------LDNNGKNLDAVRPVADWAKSSGVKQ 181
                 D      +      D V            +     N    + + D    + +  
Sbjct: 49  -----SDYTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISN 103

Query: 182 FLFISSAGIYKPADEPPHVEGDVVKP 207
            ++ S+   Y      P  E ++  P
Sbjct: 104 IVYASTISAYSDETSLPWNEKELPLP 129

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 29/171 (16%), Positives = 47/171 (27%), Gaps = 16/171 (9%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+ ++    G     G  +  E    GHEV  +     +  K           +V     
Sbjct: 2   KIAVL----GATGRAGSAIVAEARRRGHEVLAVV---RDPQKAADRLGATVATLVKEPLV 54

Query: 136 TVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA- 194
               D   V  VV  ++          +LD    +    ++S       + SA +  P  
Sbjct: 55  LTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGA 114

Query: 195 ------DEPPHVEGDVVKPDAGHVQVEKYISENFS--NWASFRPQYMIGSG 237
                 D P           A +   E    +  +  NW    P     SG
Sbjct: 115 DHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSG 165

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 33/168 (19%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+V    G +  +  YL  EL   GHE   M   +E   ++++               
Sbjct: 23  RVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER----------GASD 68

Query: 136 TVWGD-PAEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQF 182
            V  +   +  +    +  D V+   G             +L         A+  G+K+F
Sbjct: 69  IVVANLEEDFSHAFASI--DAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRF 126

Query: 183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
           + +SS G      +P     ++          +  +  +  ++   RP
Sbjct: 127 IMVSSVG----TVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRP 170

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 29/166 (17%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K VLI+    G    I  ++  +L      + T+         K+         +     
Sbjct: 24  KNVLIL----GAGGQIARHVINQLADKQTIKQTLFAR---QPAKIH--------KPYPTN 68

Query: 134 GKTVWGD---PAEVGNVVGGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSAG 189
            + + GD    A +   + G    V  +  G++LD     V    K+  VK+ +F+ S G
Sbjct: 69  SQIIMGDVLNHAALKQAMQGQDI-VYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG 127

Query: 190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISENF---S--NWASFRP 230
           IY   DE P    +      G        + +    S   +   RP
Sbjct: 128 IY---DEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRP 170

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 34/177 (19%), Positives = 55/177 (31%), Gaps = 24/177 (13%)

Query: 69  ASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE 128
                K K+LI     GG   IG ++ K  L  GH   + T    NS K          E
Sbjct: 6   EENGMKSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTR--PNSSKTTLLD-----E 54

Query: 129 IVSAGGKTVWGD---PAEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVKQFLF 184
             S G   V G+     ++  ++  V  DVV+       +     + +  K +G  +   
Sbjct: 55  FQSLGAIIVKGELDEHEKLVELMKKV--DVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

Query: 185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP----QYMIGSG 237
            S  G+    D    +       +     + + I E    +          Y I   
Sbjct: 113 PSDFGV--EEDRINALPPFEALIER-KRMIRRAIEEANIPYTYVSANCFASYFINYL 166

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 32/151 (21%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEIV 130
           KKV I  T  G    IG ++A+ LL  G +V  +    T   E+        F   + I 
Sbjct: 22  KKVFI--T--GICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGS-IA 76

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVL-------------DNNGKNLDAVRPVADWAKSS 177
                    D A V  ++G +  D V+             ++   N      V   AK +
Sbjct: 77  ---------DHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKN 127

Query: 178 GVKQFLFISSAGIY-KPADEPPHVEGDVVKP 207
            V +F++  +A  Y     + P        P
Sbjct: 128 NVGRFVYFQTALCYGVKPIQQPVRLDHPRNP 158

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 27/166 (16%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIV 130
           E  K+ I    +G    I  ++A+ L   GH V           ++ M    F+  +  V
Sbjct: 28  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRV 83

Query: 131 SAGGKTVWGDPAEVGNV---VGGVTF------DVVLDNNGKNLDAVRPVADWAKSSGVKQ 181
                 V      V N+   +GG+ F       ++ +N   + +    + + A+ +G+K+
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN----MIEAARINGIKR 139

Query: 182 FLFISSAGIY-----KPADEPPHVEGDV--VKPDAGHVQVEKYISE 220
           F + SSA IY              E D    +P      +EK  +E
Sbjct: 140 FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAF-GLEKLATE 184

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 31/187 (16%), Positives = 58/187 (31%), Gaps = 26/187 (13%)

Query: 71  AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------------------MTVGD 112
           +A    VL+     G     G  + K+L     +                     + +GD
Sbjct: 1   SANLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD 56

Query: 113 ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLD--AVRPV 170
                   P F   + +V          P       G   F        + +D    +  
Sbjct: 57  ITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQ 116

Query: 171 ADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP 230
            D AK +GVK  + + S G   P D P +  G+         + E+Y++++ + +   R 
Sbjct: 117 IDAAKVAGVKHIVVVGSMGGTNP-DHPLNKLGNGNILVW-KRKAEQYLADSGTPYTIIRA 174

Query: 231 QYMIGSG 237
             ++   
Sbjct: 175 GGLLDKE 181

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 37/159 (23%), Positives = 57/159 (35%), Gaps = 33/159 (20%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
           A+ K  LI  T  G    IG  L + LL    +V  +    T    N D+++     +  
Sbjct: 25  AQPKVWLI--T--GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVVL----------------DNNGKNLDAVR 168
                  K + GD     +  N   GV  D VL                 +N  N+D   
Sbjct: 81  SNF----KFIQGDIRNLDDCNNACAGV--DYVLHQAALGSVPRSINDPITSNATNIDGFL 134

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
            +   A+ + V+ F + +S+  Y      P VE  + KP
Sbjct: 135 NMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKP 173

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 41/194 (21%), Positives = 65/194 (33%), Gaps = 41/194 (21%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----DENSDKMKK-----PPF 123
           + K V I+    G     G  L KE+L  G    +  +G      + +  K        F
Sbjct: 17  QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDF 72

Query: 124 NRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKN------LDAVRPVADWAKSS 177
            + ++  SA      G        +G           G         D V   A+ AK+ 
Sbjct: 73  EKLDDYASA----FQGHDV-GFCCLG-----TTRGKAGAEGFVRVDRDYVLKSAELAKAG 122

Query: 178 GVKQFLFISSAGIYKPADEP-PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIG 235
           G K F  +SS G  K ++     V+G          +VE  + E  F  ++ FRP  ++ 
Sbjct: 123 GCKHFNLLSSKGADKSSNFLYLQVKG----------EVEAKVEELKFDRYSVFRPGVLLC 172

Query: 236 SGNNKDCEEWFFDR 249
                   EW   +
Sbjct: 173 DRQESRPGEWLVRK 186

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 44/190 (23%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVS 131
            K+VL+     G   + G +L   +L       ++    +   +  +   P     E++ 
Sbjct: 5   PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLP 60

Query: 132 AGGKTVWGDPAEVGNVVG--------GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL 183
                + G        +G           F  V      + D    V   A   G + +L
Sbjct: 61  Q----LDGSIDTAFCCLGTTIKEAGSEEAFRAV------DFDLPLAVGKRALEMGARHYL 110

Query: 184 FISSAGIYKPADEP-----PHVEGDVVKPDAGHVQVEKYISE-NFSNWASFRPQYMIGSG 237
            +S+ G    AD         V+G          ++E+ + E  +      RP  + G  
Sbjct: 111 VVSALG----ADAKSSIFYNRVKG----------ELEQALQEQGWPQLTIARPSLLFGPR 156

Query: 238 NNKDCEEWFF 247
                 E   
Sbjct: 157 EEFRLAEILA 166

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 36/150 (24%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
            ++L+  T  G    +G  +   L    HEV +    D   D                  
Sbjct: 3   NRLLV--T--GAAGGVGSAIRPHLGTLAHEVRLS---D-IVDLGAAEAHEEI-------- 46

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVL------------DNNGKNLDAVRPVADWAKSSGV 179
             V  D      V ++V     D ++            D    N+     + + A++ G 
Sbjct: 47  --VACDLADAQAVHDLVKDC--DGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGK 102

Query: 180 KQFLFISSAGIY-KPADEPPHVEGDVVKPD 208
            + +F SS                   +PD
Sbjct: 103 PRIVFASSNHTIGYYPRTTRIDTEVPRRPD 132

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 42.1 bits (100), Expect = 7e-05
 Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 15/141 (10%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K ++LI  T  GG   IG +LA+ L+ SG EVT+  + D     M  P       +    
Sbjct: 7   KHRILI--T--GGAGFIGGHLARALVASGEEVTV--LDDLRVPPMIPPE-GTGKFLEKPV 59

Query: 134 GKTVWGDPAEVGNVV-----GGVTFDVV--LDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
            +    D ++V  V        V       LD    N+D+ R +     S GV + +  S
Sbjct: 60  LELEERDLSDVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGS 118

Query: 187 SAGIYKPADEPPHVEGDVVKP 207
           +  +Y  AD  P  E   + P
Sbjct: 119 TCEVYGQADTLPTPEDSPLSP 139

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 18/103 (17%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           + +   +     G+  D V+        + K +  V  +   AK SGV   +FI      
Sbjct: 53  YFNQESMVEAFKGM--DTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYM 233
              + P H+               + +S +  ++   R   YM
Sbjct: 110 -QHNNPFHMSPY-------FGYASRLLSTSGIDYTYVRMAMYM 144

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 33/159 (20%)

Query: 72  AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFN 127
              K  LI    +G    IG  L ++LL     V  +    T    N D++K        
Sbjct: 23  FSPKTWLI----TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQW 78

Query: 128 EIVSAGGKTVWGD---PAEVGNVVGGVTFDVV------------LDN----NGKNLDAVR 168
                    + GD         V+ G   D V            + +    N  N+    
Sbjct: 79  SRF----CFIEGDIRDLTTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFL 132

Query: 169 PVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKP 207
            +   AK++ V+ F + +S+  Y      P VE ++  P
Sbjct: 133 NILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNP 171

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 19/103 (18%)

Query: 138 WGDPAEVGNVVGGVTFDVVL------DNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
           +  P  +     GV    +L       +N   +     V   A+ +GVK   +   A   
Sbjct: 54  YNQPESLQKAFAGV--SKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF-- 109

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRP-QYM 233
             A+E       V      H+  E  I      +   R   Y 
Sbjct: 110 --AEESIIPLAHV------HLATEYAIRTTNIPYTFLRNALYT 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.93
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.91
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.91
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.91
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.91
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.91
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.9
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.9
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.9
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.9
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.9
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.89
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.89
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.89
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.88
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.88
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.88
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.88
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.88
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.88
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.88
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.88
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.87
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.87
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.87
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.87
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.86
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.86
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.86
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.85
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.85
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.85
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.85
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.85
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.85
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.84
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.83
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.83
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.83
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.82
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.82
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.82
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.81
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.81
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.8
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.78
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.77
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.76
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.75
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.75
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.74
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.74
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.73
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.73
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.72
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.72
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.72
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.71
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.71
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.71
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.71
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.7
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.7
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.7
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.7
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.7
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.7
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.7
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.7
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.7
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.7
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.69
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.69
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.69
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.69
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.69
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.68
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.68
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.68
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.68
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.68
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.68
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.68
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.68
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.67
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.67
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.67
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.67
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.67
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.67
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.67
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.66
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.66
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.66
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.66
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.66
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.66
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.66
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.66
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.66
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.66
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.66
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.66
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.66
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.66
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.66
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.66
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.66
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.66
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.66
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.66
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.65
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.65
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.65
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.65
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.65
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.65
1spx_A	278	Short-chain reductase family member (5L265); paral	99.65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.65
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.65
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.65
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.65
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.65
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.65
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.65
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.65
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.65
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.65
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.65
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.65
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.64
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.64
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.64
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.64
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.64
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.64
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.64
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.64
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.64
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.64
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.64
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.64
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.64
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.64
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.64
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.63
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.63
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.63
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.63
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.63
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.63
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.63
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.63
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.63
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.63
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.63
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.63
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.63
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.63
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.62
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.62
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.62
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.62
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.62
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.62
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.62
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.62
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.62
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.62
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.62
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.61
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.61
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.61
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.61
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.61
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.61
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.61
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.61
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.61
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.61
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.61
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.61
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.61
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.61
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.61
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.61
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.61
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.6
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.6
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.6
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.6
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.6
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.6
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.6
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.59
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.59
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.59
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.59
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.59
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.59
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.59
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.59
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.59
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.58
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.58
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.58
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.58
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.58
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.58
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.58
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.58
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.57
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.57
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.57
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.57
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.57
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.57
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.57
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.57
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.57
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.56
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.56
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.56
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.56
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.56
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.56
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.55
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.55
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.55
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.54
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.54
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.54
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.54
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.54
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.54
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.53
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.53
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.52
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.52
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.52
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.51
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.51
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.51
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.51
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.51
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.5
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.49
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.49
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.48
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.48
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.48
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.47
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.44
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.43
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.43
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.42
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.38
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.34
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.33
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.2
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.17
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.17
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.11
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.11
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.08
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.88
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.87
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.86
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.85
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.83
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.79
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.73
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.67
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.63
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.59
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.5
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.47
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.45
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.39
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.37
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.34
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.34
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.33
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.33
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.3
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.27
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.24
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.16
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.13
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.12
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.11
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.02
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.9
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.87
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.82
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.81
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.75
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.74
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.74
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.7
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.69
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.69
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.69
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.69
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.65
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.63
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.62
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.61
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.55
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.54
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.52
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.51
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.49
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.49
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.49
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.49
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.44
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.42
1lnq_A	336	MTHK channels, potassium channel related protein;	97.41
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.4
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.38
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.38
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.33
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.31
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.31
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.29
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.28
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.28
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.27
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.26
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.25
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.24
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.23
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.22
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.2
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.19
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.16
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.16
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.14
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.13
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.1
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.09
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.08
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.07
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.05
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.05
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.05
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.03
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.02
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.02
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.02
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.0
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.98
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.96
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.95
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.93
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.91
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.9
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.89
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.88
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.88
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.88
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.87
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.87
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.84
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.8
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.78
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.77
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.77
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.77
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.75
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.75
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.74
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.73
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.71
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.71
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.7
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	96.69
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.69
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.69
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.68
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.66
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.66
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.64
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.63
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.63
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.61
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.6
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.59
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.56
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.52
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.51
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.49
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.48
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.47
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.46
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.45
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.45
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.44
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.43
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.42
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.42
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.42
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.39
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.38
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.38
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.37
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	96.37
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.37
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.37
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.37
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.36
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.36
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.35
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.34
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.34
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	96.29
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.29
3nkl_A	141	UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo	96.28
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.27
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.26
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	96.26
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.25
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.25
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.25
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.24
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.22
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.22
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.22
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.22
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.2
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	96.18
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.17
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.17
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.16
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.16
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.16
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.15
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.14
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.13
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.13
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.13
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.12
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.09
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.06
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.06
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.05
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.04
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.03
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.03

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=5.2e-25  Score=194.79  Aligned_cols=156  Identities=22%  Similarity=0.247  Sum_probs=128.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-------CCceEEeCC---H
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-------AGGKTVWGD---P  141 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-------~~v~~v~~D---~  141 (250)
                      .++|+||||    ||+||||++|+++|+++||+|++++|........       ...+..       .+++++.+|   +
T Consensus        23 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~d~   91 (351)
T 3ruf_A           23 FSPKTWLIT----GVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYN-------LDEVKTLVSTEQWSRFCFIEGDIRDL   91 (351)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH-------HHHHHHTSCHHHHTTEEEEECCTTCH
T ss_pred             CCCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-------hhhhhhccccccCCceEEEEccCCCH
Confidence            356899999    9999999999999999999999999976432210       001111       467777777   7


Q ss_pred             HHHHhhhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          142 AEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      +++.+++++  +|+|||+|+.                |+.++.+++++|++.++++|||+||.++|+.....+++|+++.
T Consensus        92 ~~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  169 (351)
T 3ruf_A           92 TTCEQVMKG--VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIG  169 (351)
T ss_dssp             HHHHHHTTT--CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred             HHHHHHhcC--CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCC
Confidence            888888886  8999999982                5788999999999999999999999999999888899999988


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      .+. +.|+..|...|.         +++++++||+.+|||+....
T Consensus       170 ~p~-~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~  213 (351)
T 3ruf_A          170 NPL-SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPN  213 (351)
T ss_dssp             CCC-SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCC
T ss_pred             CCC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCC
Confidence            876 788887765553         79999999999999987643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.93  E-value=1.3e-24  Score=189.54  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=122.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--HHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~~~l~~~l~~  150 (250)
                      |+|+||||    ||+||||++|+++|+++|++|++++|+++... +             .+++++.+|  .+++.+++++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-------------~~~~~~~~Dl~~~~~~~~~~~   62 (311)
T 3m2p_A            1 MSLKIAVT----GGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-------------NDYEYRVSDYTLEDLINQLND   62 (311)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCCHHHHHHHTTT
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-------------CceEEEEccccHHHHHHhhcC
Confidence            46899999    99999999999999999999999999842221 1             156777777  6788888885


Q ss_pred             CcccEEEeCCCc------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          151 VTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       151 ~~~d~Vi~~ag~------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                        +|+|||+|+.            |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+..|..
T Consensus        63 --~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~  139 (311)
T 3m2p_A           63 --VDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD-LMYGVSKLA  139 (311)
T ss_dssp             --CSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS-SHHHHHHHH
T ss_pred             --CCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC-chhHHHHHH
Confidence              8999999983            6889999999999999999999999999998877889999988876 788877755


Q ss_pred             HHh---------CCcEEEEecCeeecCCCCC
Q 025587          219 SEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       219 ~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|.         +++++++||+.+||++...
T Consensus       140 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~  170 (311)
T 3m2p_A          140 CEHIGNIYSRKKGLCIKNLRFAHLYGFNEKN  170 (311)
T ss_dssp             HHHHHHHHHHHSCCEEEEEEECEEECSCC--
T ss_pred             HHHHHHHHHHHcCCCEEEEeeCceeCcCCCC
Confidence            543         6899999999999998764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=2.5e-24  Score=187.28  Aligned_cols=147  Identities=25%  Similarity=0.347  Sum_probs=123.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+||||++|+++|+++||+|++++|..+.....           ...+++++.+|   .+ +.+++++ 
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~Dl~d~~-~~~~~~~-   63 (312)
T 3ko8_A            1 MRIVVT----GGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-----------VNPSAELHVRDLKDYS-WGAGIKG-   63 (312)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-----------SCTTSEEECCCTTSTT-TTTTCCC-
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-----------cCCCceEEECccccHH-HHhhcCC-
Confidence            589999    9999999999999999999999999987554322           13456777777   44 6666655 


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                        |+|||+|+                .|+.++.++++++++.++++||++||.++|+.....+++|+++..+. +.|+.+
T Consensus        64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~-~~Y~~s  140 (312)
T 3ko8_A           64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI-SVYGAA  140 (312)
T ss_dssp             --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHH
T ss_pred             --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC-ChHHHH
Confidence              99999998                36889999999999999999999999999999888889999888776 889988


Q ss_pred             HHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          216 KYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       216 k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      |...|.         +++++++||+.+|||+....
T Consensus       141 K~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~  175 (312)
T 3ko8_A          141 KAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG  175 (312)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSS
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCC
Confidence            865554         78999999999999986643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.91  E-value=1.1e-23  Score=185.96  Aligned_cols=156  Identities=13%  Similarity=0.105  Sum_probs=124.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+||||++|+++|+++|  ++|++++|....  ...+...       ....+++++.+|   ++.+.
T Consensus        23 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~Dl~d~~~~~   91 (346)
T 4egb_A           23 NAMNILVT----GGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-------QDHPNYYFVKGEIQNGELLE   91 (346)
T ss_dssp             -CEEEEEE----TTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-------TTCTTEEEEECCTTCHHHHH
T ss_pred             CCCeEEEE----CCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-------ccCCCeEEEEcCCCCHHHHH
Confidence            45799999    999999999999999999  777777776521  1111110       112467777776   78888


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC-CCCCccCCCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPD  208 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~-~~~~~~e~~~~~~~  208 (250)
                      +++++.++|+|||+|+                .|+.++.+++++|++.++++|||+||.++|+.. ...+++|+++..+.
T Consensus        92 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~  171 (346)
T 4egb_A           92 HVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN  171 (346)
T ss_dssp             HHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC
T ss_pred             HHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC
Confidence            8888766899999998                257789999999999999999999999999986 45689999988876


Q ss_pred             CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          209 AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       209 ~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                       ..|+..|...|.         +++++++||+.+|||+...
T Consensus       172 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~  211 (346)
T 4egb_A          172 -SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYP  211 (346)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT
T ss_pred             -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCc
Confidence             788887755543         7999999999999998754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=6.5e-24  Score=186.84  Aligned_cols=157  Identities=21%  Similarity=0.234  Sum_probs=127.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+||||++++++|+++|++|++++|..+......+    .+......++.++.+|   ++++.++++
T Consensus         4 ~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   75 (341)
T 3enk_A            4 TKGTILVT----GGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIA----RIEKITGKTPAFHETDVSDERALARIFD   75 (341)
T ss_dssp             SSCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHH----HHHHHHSCCCEEECCCTTCHHHHHHHHH
T ss_pred             CCcEEEEe----cCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHH----HHHhhcCCCceEEEeecCCHHHHHHHHh
Confidence            45799999    999999999999999999999999998754432110    0111123456666666   888888887


Q ss_pred             CCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhH
Q 025587          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (250)
Q Consensus       150 ~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~  213 (250)
                      ...+|+|||+|+.                |+.++.++++++++.++++||++||.++|+.....+++|..+..+. +.|+
T Consensus        76 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~Y~  154 (341)
T 3enk_A           76 AHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT-NPYG  154 (341)
T ss_dssp             HSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS-SHHH
T ss_pred             ccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC-ChhH
Confidence            5458999999983                6788999999999999999999999999998888889999888765 7899


Q ss_pred             HHHHHHHh----------CCcEEEEecCeeecCCC
Q 025587          214 VEKYISEN----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       214 ~~k~~~e~----------~~~~~ilRp~~i~G~~~  238 (250)
                      .+|...|.          +++++++||+.+|||+.
T Consensus       155 ~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          155 QTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHE  189 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEeeccccCCcc
Confidence            88866554          38999999999999964

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.91  E-value=2.8e-23  Score=181.96  Aligned_cols=148  Identities=22%  Similarity=0.283  Sum_probs=121.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      ||+||||    ||+||||++++++|+++|++|++++|.......          .+ ..+++++.+|   .+.+.++++.
T Consensus         1 M~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~-~~~~~~~~~D~~~~~~~~~~~~~   65 (330)
T 2c20_A            1 MNSILIC----GGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED----------AI-TEGAKFYNGDLRDKAFLRDVFTQ   65 (330)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----------GS-CTTSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh----------hc-CCCcEEEECCCCCHHHHHHHHhh
Confidence            3789999    999999999999999999999999997643221          01 1256666666   7778888873


Q ss_pred             CcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          151 VTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       151 ~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                      .++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+++..+. ..|+.
T Consensus        66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~-~~Y~~  144 (330)
T 2c20_A           66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPT-NTYGE  144 (330)
T ss_dssp             SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCS-SHHHH
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCC-ChHHH
Confidence            348999999982                5678999999999999999999999999998777789999887765 78887


Q ss_pred             HHHHHHh---------CCcEEEEecCeeecCC
Q 025587          215 EKYISEN---------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       215 ~k~~~e~---------~~~~~ilRp~~i~G~~  237 (250)
                      .|...|.         +++++++||+.+||++
T Consensus       145 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          145 TKLAIEKMLHWYSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHHHHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEecCcccCCC
Confidence            7765543         6899999999999996

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.91  E-value=1.5e-23  Score=174.47  Aligned_cols=147  Identities=24%  Similarity=0.305  Sum_probs=119.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+++....+            ..+++++.+|   .+++.+++++
T Consensus         4 m~~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~   67 (227)
T 3dhn_A            4 VKKIVLI----GASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------NEHLKVKKADVSSLDEVCEVCKG   67 (227)
T ss_dssp             CCEEEEE----TCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------------CTTEEEECCCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------------cCceEEEEecCCCHHHHHHHhcC
Confidence            4799999    9999999999999999999999999987655432            1356666666   8889999987


Q ss_pred             CcccEEEeCCCc----------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH
Q 025587          151 VTFDVVLDNNGK----------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE  220 (250)
Q Consensus       151 ~~~d~Vi~~ag~----------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e  220 (250)
                        +|+|||++|.          |+.++.++++++++.++++||++||.++|...... ..|+.+..+. ..|+..|...|
T Consensus        68 --~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~-~~Y~~sK~~~e  143 (227)
T 3dhn_A           68 --ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPE-NILPGVKALGE  143 (227)
T ss_dssp             --CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCG-GGHHHHHHHHH
T ss_pred             --CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchH-HHHHHHHHHHH
Confidence              8999999984          68899999999999999999999999877664432 3344444544 77888886666


Q ss_pred             ---------hCCcEEEEecCeeecCCCCC
Q 025587          221 ---------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       221 ---------~~~~~~ilRp~~i~G~~~~~  240 (250)
                               .+++++++||+.+||++...
T Consensus       144 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~  172 (227)
T 3dhn_A          144 FYLNFLMKEKEIDWVFFSPAADMRPGVRT  172 (227)
T ss_dssp             HHHHTGGGCCSSEEEEEECCSEEESCCCC
T ss_pred             HHHHHHhhccCccEEEEeCCcccCCCccc
Confidence                     26899999999999998654

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.91  E-value=2.8e-23  Score=182.71  Aligned_cols=148  Identities=16%  Similarity=0.211  Sum_probs=119.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+||||++|+++|+++||+|++++|+.+..+.+           ...+++++.+|   ++++.++++
T Consensus        12 ~~M~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~~~~Dl~d~~~~~~~~~   76 (342)
T 2x4g_A           12 AHVKYAVL----GATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-----------AYLEPECRVAEMLDHAGLERALR   76 (342)
T ss_dssp             CCCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-----------GGGCCEEEECCTTCHHHHHHHTT
T ss_pred             cCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-----------ccCCeEEEEecCCCHHHHHHHHc
Confidence            34699999    9999999999999999999999999987554322           12356677776   778888888


Q ss_pred             CCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC--CCccCCCCCCCC---CC
Q 025587          150 GVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE--PPHVEGDVVKPD---AG  210 (250)
Q Consensus       150 ~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~--~~~~e~~~~~~~---~~  210 (250)
                      +  +|+|||+|+              .|+.++.+++++|++.++++||++||.++|+....  .+ +|+++..+.   ..
T Consensus        77 ~--~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~  153 (342)
T 2x4g_A           77 G--LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKS  153 (342)
T ss_dssp             T--CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSC
T ss_pred             C--CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccC
Confidence            6  899999998              25788999999999999999999999999987654  44 888877761   37


Q ss_pred             hhHHHHHHHHh--------CCcEEEEecCeeecCCC
Q 025587          211 HVQVEKYISEN--------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       211 ~y~~~k~~~e~--------~~~~~ilRp~~i~G~~~  238 (250)
                      .|+..|...|.        +++++++||+.+||++.
T Consensus       154 ~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          154 SYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCC
T ss_pred             hHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCC
Confidence            78877755443        79999999999999987

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=1.8e-23  Score=184.55  Aligned_cols=140  Identities=21%  Similarity=0.335  Sum_probs=116.7

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ..++|+||||    ||+||||++|+++|+++||+|++++|..+.                 .+++++.+|   .+.+.++
T Consensus        16 ~~~~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~   74 (347)
T 4id9_A           16 PRGSHMILVT----GSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDA   74 (347)
T ss_dssp             -----CEEEE----TTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHH
T ss_pred             ccCCCEEEEE----CCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHH
Confidence            3456899999    999999999999999999999999998743                 134455555   8888898


Q ss_pred             hcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccC--CCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP--ADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~--~~~~~~~e~~~~~~~~~~  211 (250)
                      +++  +|+|||+|+              .|+.++.+++++|++.++++|||+||.++|+.  ....+++|.++..+. +.
T Consensus        75 ~~~--~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~-~~  151 (347)
T 4id9_A           75 IMG--VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN-SP  151 (347)
T ss_dssp             HTT--CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC-SH
T ss_pred             HhC--CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC-Ch
Confidence            886  899999998              36788999999999999999999999999998  566789999888775 88


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeee
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMI  234 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~  234 (250)
                      |+..|...|.         +++++++||+.+|
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          152 YGLTKLLGEELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEccceEe
Confidence            9888766553         6899999999999

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.91  E-value=9.1e-24  Score=182.00  Aligned_cols=144  Identities=22%  Similarity=0.271  Sum_probs=122.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    | +||||++|+++|+++||+|++++|+.+...               .+++++.+|   .+.+.+++++
T Consensus         3 ~~~ilVt----G-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~~~~~~~~Dl~d~~~~~~~~~~   62 (286)
T 3gpi_A            3 LSKILIA----G-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---------------AGVQTLIADVTRPDTLASIVHL   62 (286)
T ss_dssp             CCCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---------------TTCCEEECCTTCGGGCTTGGGG
T ss_pred             CCcEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cCCceEEccCCChHHHHHhhcC
Confidence            4789999    9 599999999999999999999999875421               245566666   6777777775


Q ss_pred             CcccEEEeCCC-----------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHH
Q 025587          151 VTFDVVLDNNG-----------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (250)
Q Consensus       151 ~~~d~Vi~~ag-----------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~  219 (250)
                       ++|+|||+|+           .|+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+..|...
T Consensus        63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~  140 (286)
T 3gpi_A           63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK-DFSGKRMLEA  140 (286)
T ss_dssp             -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC-SHHHHHHHHH
T ss_pred             -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC-ChhhHHHHHH
Confidence             4899999997           47899999999999999999999999999999888889999988876 7888777665


Q ss_pred             HhC---CcEEEEecCeeecCCCC
Q 025587          220 ENF---SNWASFRPQYMIGSGNN  239 (250)
Q Consensus       220 e~~---~~~~ilRp~~i~G~~~~  239 (250)
                      |..   ++++++||+.+||++..
T Consensus       141 E~~~~~~~~~ilR~~~v~G~~~~  163 (286)
T 3gpi_A          141 EALLAAYSSTILRFSGIYGPGRL  163 (286)
T ss_dssp             HHHGGGSSEEEEEECEEEBTTBC
T ss_pred             HHHHhcCCeEEEecccccCCCch
Confidence            543   88999999999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=2.2e-23  Score=183.07  Aligned_cols=159  Identities=16%  Similarity=0.085  Sum_probs=124.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~  146 (250)
                      .+++|+||||    ||+||||++++++|+++|++|++++|+.+....      ..+..+ ...+++++.+|   .+++.+
T Consensus        11 ~~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~   80 (335)
T 1rpn_A           11 GSMTRSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELGIEGDIQYEDGDMADACSVQR   80 (335)
T ss_dssp             ----CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTTCGGGEEEEECCTTCHHHHHH
T ss_pred             cccCCeEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCCccccc------cchhhccccCceEEEECCCCCHHHHHH
Confidence            4567899999    999999999999999999999999998754210      001111 12356667776   778888


Q ss_pred             hhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCC-CEEEEEcCcccccCCCCCCccCCCCCCCCC
Q 025587          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~  209 (250)
                      ++++.++|+|||+|+.                |+.++.++++++++.++ ++||++||.++|+.....+++|+++..+. 
T Consensus        81 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~-  159 (335)
T 1rpn_A           81 AVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-  159 (335)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-
T ss_pred             HHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC-
Confidence            8876558999999982                46789999999999886 89999999999998777788999888775 


Q ss_pred             ChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          210 GHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       210 ~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +.|+..|...|.         +++++++||+++|||+...
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~  199 (335)
T 1rpn_A          160 SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGI  199 (335)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCC
Confidence            788887765543         7899999999999997654

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.90  E-value=3.4e-23  Score=180.79  Aligned_cols=148  Identities=23%  Similarity=0.201  Sum_probs=121.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..|+||||    ||+||||++|+++|+++|++|++++|+.+. ..           +   +++++.+|   ++.+.++++
T Consensus        11 ~~~~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l---~~~~~~~Dl~d~~~~~~~~~   71 (321)
T 2pk3_A           11 GSMRALIT----GVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------P---NVEMISLDIMDSQRVKKVIS   71 (321)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------T---TEEEEECCTTCHHHHHHHHH
T ss_pred             CcceEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------c---eeeEEECCCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999998753 21           1   45556665   778888887


Q ss_pred             CCcccEEEeCCCc----------------CHHhHHHHHHHHHhC-CCCEEEEEcCcccccCC--CCCCccCCCCCCCCCC
Q 025587          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPA--DEPPHVEGDVVKPDAG  210 (250)
Q Consensus       150 ~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~--~~~~~~e~~~~~~~~~  210 (250)
                      +.++|+|||+|+.                |+.++.++++++++. ++++||++||..+|+..  ...+++|+++..+. .
T Consensus        72 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~-~  150 (321)
T 2pk3_A           72 DIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM-S  150 (321)
T ss_dssp             HHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC-S
T ss_pred             hcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC-C
Confidence            6558999999982                577899999999875 68999999999999976  56688998887765 7


Q ss_pred             hhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          211 HVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       211 ~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|+.+|...|.         +++++++||+.+|||+...
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~  189 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL  189 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC
Confidence            88877755543         7899999999999998764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=2.1e-23  Score=185.91  Aligned_cols=150  Identities=26%  Similarity=0.305  Sum_probs=121.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~  147 (250)
                      ++|+||||    ||+||||++|+++|+++ ||+|++++|+.+....+.          ...+++++.+|    .+.+.++
T Consensus        23 ~~~~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~~~~Dl~~d~~~~~~~   88 (372)
T 3slg_A           23 KAKKVLIL----GVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------KHERMHFFEGDITINKEWVEYH   88 (372)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------GSTTEEEEECCTTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------cCCCeEEEeCccCCCHHHHHHH
Confidence            46899999    99999999999999998 999999999876544321          12467777766    5677778


Q ss_pred             hcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC------
Q 025587          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------  205 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~------  205 (250)
                      +++  +|+|||+|+.                |+.++.+++++|++.+ ++|||+||.++|+.....++.|.+..      
T Consensus        89 ~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~  165 (372)
T 3slg_A           89 VKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPI  165 (372)
T ss_dssp             HHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCT
T ss_pred             hcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCC
Confidence            875  8999999982                5677899999999988 99999999999999877788887744      


Q ss_pred             -CCCCChhHHHHHHHHh--------CCcEEEEecCeeecCCCCC
Q 025587          206 -KPDAGHVQVEKYISEN--------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 -~~~~~~y~~~k~~~e~--------~~~~~ilRp~~i~G~~~~~  240 (250)
                       .+ .+.|+..|...|.        +++++++||+.+|||+.+.
T Consensus       166 ~~p-~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~  208 (372)
T 3slg_A          166 NKP-RWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDS  208 (372)
T ss_dssp             TCT-THHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCC
T ss_pred             CCC-CCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCccc
Confidence             23 2568777655443        7899999999999998653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=2e-23  Score=184.92  Aligned_cols=160  Identities=23%  Similarity=0.245  Sum_probs=124.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+||||++|+++|+++|++|++++|...... .+... ...+......+++++.+|   .+++.+++
T Consensus        26 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~  100 (352)
T 1sb8_A           26 QPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNAC  100 (352)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             cCCeEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHH-hhhcccccCCceEEEECCCCCHHHHHHHh
Confidence            46799999    99999999999999999999999999764211 00000 000000012467777777   67788888


Q ss_pred             cCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChh
Q 025587          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y  212 (250)
                      ++  +|+|||+|+.                |+.++.++++++++.++++||++||.++|+.....+++|+++..+. ..|
T Consensus       101 ~~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~-~~Y  177 (352)
T 1sb8_A          101 AG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SPY  177 (352)
T ss_dssp             TT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SHH
T ss_pred             cC--CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCC-Chh
Confidence            85  8999999982                4678999999999999999999999999998777788998887765 788


Q ss_pred             HHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          213 QVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       213 ~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +..|...|.         +++++++||+.+|||+...
T Consensus       178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~  214 (352)
T 1sb8_A          178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDP  214 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCC
Confidence            877755443         7899999999999998654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.90  E-value=1.8e-23  Score=179.86  Aligned_cols=147  Identities=15%  Similarity=0.170  Sum_probs=120.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .|+|+||||    || ||||++|+++|+++||+|++++|+.+....           +...+++++.+|..++.  +.+ 
T Consensus         3 ~m~~~ilVt----Ga-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~d~~--~~~-   63 (286)
T 3ius_A            3 AMTGTLLSF----GH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-----------IRASGAEPLLWPGEEPS--LDG-   63 (286)
T ss_dssp             --CCEEEEE----TC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-----------HHHTTEEEEESSSSCCC--CTT-
T ss_pred             CCcCcEEEE----CC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-----------HhhCCCeEEEecccccc--cCC-
Confidence            356899999    98 999999999999999999999998754432           23357888888866654  444 


Q ss_pred             cccEEEeCCCcC---HHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH-----h
Q 025587          152 TFDVVLDNNGKN---LDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE-----N  221 (250)
Q Consensus       152 ~~d~Vi~~ag~~---~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e-----~  221 (250)
                       +|+|||+|+..   ...+.++++++++  .++++|||+||.++|+.....+++|+++..+. +.|+..|...|     .
T Consensus        64 -~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~  141 (286)
T 3ius_A           64 -VTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT-AARGRWRVMAEQQWQAV  141 (286)
T ss_dssp             -CCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC-SHHHHHHHHHHHHHHHS
T ss_pred             -CCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC-CHHHHHHHHHHHHHHhh
Confidence             89999999853   3457899999998  78999999999999999888789999988876 77887665544     3


Q ss_pred             -CCcEEEEecCeeecCCCC
Q 025587          222 -FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       222 -~~~~~ilRp~~i~G~~~~  239 (250)
                       +++++++||+.+||++..
T Consensus       142 ~~~~~~ilRp~~v~G~~~~  160 (286)
T 3ius_A          142 PNLPLHVFRLAGIYGPGRG  160 (286)
T ss_dssp             TTCCEEEEEECEEEBTTBS
T ss_pred             cCCCEEEEeccceECCCch
Confidence             799999999999999754

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.90  E-value=1.3e-22  Score=180.42  Aligned_cols=159  Identities=21%  Similarity=0.325  Sum_probs=124.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh--CCCeEEEEEcCCCcccc--CCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG--SGHEVTIMTVGDENSDK--MKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~--~G~~V~~l~R~~~~~~~--~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+||||++|+++|++  +|++|++++|..+....  ...............++.++.+|   ++.+.
T Consensus         9 ~~~~vlVT----GatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            9 ENQTILIT----GGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            46899999    9999999999999999  99999999997641110  00111111222334456777777   77777


Q ss_pred             hh-hcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCC
Q 025587          146 NV-VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (250)
Q Consensus       146 ~~-l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~  210 (250)
                      ++ ..  ++|+|||+||              .|+.++.++++++++.+++ ||++||.++|+.... +++|+++..|. +
T Consensus        85 ~~~~~--~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~-~  159 (362)
T 3sxp_A           85 RLEKL--HFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE-N  159 (362)
T ss_dssp             HHTTS--CCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS-S
T ss_pred             Hhhcc--CCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC-C
Confidence            77 44  4899999998              3678999999999999886 999999999998776 89999988876 8


Q ss_pred             hhHHHHHHHHh-----C--CcEEEEecCeeecCCCCC
Q 025587          211 HVQVEKYISEN-----F--SNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       211 ~y~~~k~~~e~-----~--~~~~ilRp~~i~G~~~~~  240 (250)
                      .|+.+|...|.     .  ++++++||+.+|||+...
T Consensus       160 ~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~  196 (362)
T 3sxp_A          160 VYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFY  196 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGG
T ss_pred             hhHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCC
Confidence            89988877765     2  789999999999998754

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=4.8e-23  Score=181.77  Aligned_cols=161  Identities=22%  Similarity=0.190  Sum_probs=123.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--CCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      |+|+||||    ||+||||++++++|+++||+|++++|.........+.  ....+......+++++.+|   .+++.++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   76 (348)
T 1ek6_A            1 MAEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (348)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHH
Confidence            46899999    9999999999999999999999999865431100000  0000011113456777776   6778888


Q ss_pred             hcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      ++..++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+.....+++|+++..+....
T Consensus        77 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~  156 (348)
T 1ek6_A           77 FKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP  156 (348)
T ss_dssp             HHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred             HHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCc
Confidence            874348999999983                5778999999999999999999999999998777789998887763478


Q ss_pred             hHHHHHHHHh--------C--CcEEEEecCeeecCC
Q 025587          212 VQVEKYISEN--------F--SNWASFRPQYMIGSG  237 (250)
Q Consensus       212 y~~~k~~~e~--------~--~~~~ilRp~~i~G~~  237 (250)
                      |+.+|...|.        +  ++++++||+.+|||+
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCC
Confidence            8887755543        4  899999999999995

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.90  E-value=2.9e-23  Score=180.38  Aligned_cols=150  Identities=19%  Similarity=0.211  Sum_probs=120.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      |+|+||||    ||+||||++|+++|+++  |++|++++|+.+...             ...+++++.+|   .+++.++
T Consensus         1 M~~~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~~~~D~~d~~~~~~~   63 (312)
T 2yy7_A            1 MNPKILII----GACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-------------VVNSGPFEVVNALDFNQIEHL   63 (312)
T ss_dssp             CCCCEEEE----TTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-------------HHHSSCEEECCTTCHHHHHHH
T ss_pred             CCceEEEE----CCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-------------ccCCCceEEecCCCHHHHHHH
Confidence            45789999    99999999999999999  899999999764321             01234556665   7788888


Q ss_pred             hcCCcccEEEeCCCc---------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC-CCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-EPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~---------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~-~~~~~e~~~~~~~~~~  211 (250)
                      ++...+|+|||+|+.               |+.++.++++++++.++++||++||.++|+... ..+..|+++..+. ..
T Consensus        64 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~-~~  142 (312)
T 2yy7_A           64 VEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS-TV  142 (312)
T ss_dssp             HHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC-SH
T ss_pred             HhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC-ch
Confidence            874458999999983               567899999999999999999999999998753 3467777776665 78


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |+..|...|.         +++++++||+.+||++..+
T Consensus       143 Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~  180 (312)
T 2yy7_A          143 YGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPP  180 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCC
T ss_pred             hHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCC
Confidence            8877755443         6899999999999986543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.90  E-value=2.3e-23  Score=181.36  Aligned_cols=152  Identities=24%  Similarity=0.255  Sum_probs=117.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .++|+||||    ||+||||++|+++|+++||+|++++|..+........ ...+  ....+++++.+|..         
T Consensus         5 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~--~~~~~~~~~~~Dl~---------   68 (321)
T 3vps_A            5 TLKHRILIT----GGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEG-TGKF--LEKPVLELEERDLS---------   68 (321)
T ss_dssp             --CCEEEEE----TTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTT-SSEE--ECSCGGGCCHHHHT---------
T ss_pred             cCCCeEEEE----CCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhh-hhhh--ccCCCeeEEeCccc---------
Confidence            357899999    9999999999999999999999999987521110000 0000  11123444444432         


Q ss_pred             cccEEEeCCCc---------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH
Q 025587          152 TFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (250)
Q Consensus       152 ~~d~Vi~~ag~---------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k  216 (250)
                      ++|+|||+|+.               |+.++.+++++|++.++++|||+||.++|+.....+++|+++..+. +.|+..|
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~-~~Y~~sK  147 (321)
T 3vps_A           69 DVRLVYHLASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR-SPYAASK  147 (321)
T ss_dssp             TEEEEEECCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHHHHH
T ss_pred             cCCEEEECCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC-ChhHHHH
Confidence            48999999982               5788999999999999999999999999999888899999988876 7888887


Q ss_pred             HHHHh---------CC-cEEEEecCeeecCCCCC
Q 025587          217 YISEN---------FS-NWASFRPQYMIGSGNNK  240 (250)
Q Consensus       217 ~~~e~---------~~-~~~ilRp~~i~G~~~~~  240 (250)
                      ...|.         ++ +++++||+.+|||+...
T Consensus       148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~  181 (321)
T 3vps_A          148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP  181 (321)
T ss_dssp             HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC
Confidence            65553         67 99999999999998765

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=2.8e-23  Score=180.96  Aligned_cols=148  Identities=19%  Similarity=0.269  Sum_probs=116.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--HHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~~~l~~~l~~~  151 (250)
                      ||+||||    ||+||||++|+++|+++| .|+++++..+....           ....+++++.+|  .+++.+++++ 
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~-   63 (313)
T 3ehe_A            1 MSLIVVT----GGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE-----------FVNEAARLVKADLAADDIKDYLKG-   63 (313)
T ss_dssp             --CEEEE----TTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG-----------GSCTTEEEECCCTTTSCCHHHHTT-
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh-----------hcCCCcEEEECcCChHHHHHHhcC-
Confidence            3689999    999999999999999999 55555554322211           112345566666  2567777775 


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                       +|+|||+|+                .|+.++.++++++++.++++||++||.++|+.....+++|+.+..+. +.|+.+
T Consensus        64 -~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~-~~Y~~s  141 (313)
T 3ehe_A           64 -AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI-SLYGAS  141 (313)
T ss_dssp             -CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC-SHHHHH
T ss_pred             -CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC-CHHHHH
Confidence             899999998                36889999999999999999999999999999888889998887775 789888


Q ss_pred             HHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          216 KYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       216 k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |...|.         +++++++||+.+|||+...
T Consensus       142 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~  175 (313)
T 3ehe_A          142 KLACEALIESYCHTFDMQAWIYRFANVIGRRSTH  175 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc
Confidence            865543         7899999999999998664

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=9.3e-23  Score=177.53  Aligned_cols=149  Identities=21%  Similarity=0.265  Sum_probs=119.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+||||++++++|+++|++|++++|..+.. ..+            ..+++++.+|   ++++.++++.
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~   64 (311)
T 2p5y_A            1 MRVLVT----GGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV------------PKGVPFFRVDLRDKEGVERAFRE   64 (311)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS------------CTTCCEECCCTTCHHHHHHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc------------ccCeEEEECCCCCHHHHHHHHHh
Confidence            579999    9999999999999999999999999854321 111            1234555555   7788888873


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCc-ccccC-CCCCCccCCCCCCCCCChh
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSA-GIYKP-ADEPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~-~vy~~-~~~~~~~e~~~~~~~~~~y  212 (250)
                      ..+|+|||+|+                .|+.++.+++++|++.++++||++||. .+|+. ....+++|+++..+. ..|
T Consensus        65 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~-~~Y  143 (311)
T 2p5y_A           65 FRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK-SPY  143 (311)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC-SHH
T ss_pred             cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC-ChH
Confidence            34899999998                256789999999999999999999999 89987 555678888877665 788


Q ss_pred             HHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          213 QVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       213 ~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +.+|...|.         +++++++||+.+|||+...
T Consensus       144 ~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~  180 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDP  180 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCC
Confidence            888765543         7999999999999998654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.90  E-value=3.1e-23  Score=178.49  Aligned_cols=138  Identities=19%  Similarity=0.219  Sum_probs=117.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |+|+||||    ||+||||++++++|+++||+|++++|..-                   +    ..|.+.+.++++..+
T Consensus         4 M~m~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------------D----~~d~~~~~~~~~~~~   56 (287)
T 3sc6_A            4 MKERVIIT----GANGQLGKQLQEELNPEEYDIYPFDKKLL-------------------D----ITNISQVQQVVQEIR   56 (287)
T ss_dssp             -CEEEEEE----STTSHHHHHHHHHSCTTTEEEEEECTTTS-------------------C----TTCHHHHHHHHHHHC
T ss_pred             ceeEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeccccc-------------------C----CCCHHHHHHHHHhcC
Confidence            44599999    99999999999999999999999999321                   1    227888888887545


Q ss_pred             ccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH
Q 025587          153 FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (250)
Q Consensus       153 ~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k  216 (250)
                      +|+|||+|+                .|+.++.++++++++.++ +|||+||..+|+.....+++|+++..+. +.|+..|
T Consensus        57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK  134 (287)
T 3sc6_A           57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI-NIYGASK  134 (287)
T ss_dssp             CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC-SHHHHHH
T ss_pred             CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC-CHHHHHH
Confidence            899999998                356789999999999888 7999999999999888899999988876 7888877


Q ss_pred             HHHHh-----CCcEEEEecCeeecCCCC
Q 025587          217 YISEN-----FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       217 ~~~e~-----~~~~~ilRp~~i~G~~~~  239 (250)
                      ...|.     ..+++++||+.+|||+..
T Consensus       135 ~~~E~~~~~~~~~~~ilR~~~v~G~~~~  162 (287)
T 3sc6_A          135 YAGEQFVKELHNKYFIVRTSWLYGKYGN  162 (287)
T ss_dssp             HHHHHHHHHHCSSEEEEEECSEECSSSC
T ss_pred             HHHHHHHHHhCCCcEEEeeeeecCCCCC
Confidence            66665     578999999999999754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=1.7e-22  Score=179.21  Aligned_cols=156  Identities=18%  Similarity=0.164  Sum_probs=122.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+||||++|+++|+++||+|++++|+.+....+...    +.  ...+++++.+|   ++.+.++++
T Consensus         8 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dl~d~~~~~~~~~   77 (357)
T 1rkx_A            8 QGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET----AR--VADGMQSEIGDIRDQNKLLESIR   77 (357)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH----TT--TTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHh----hc--cCCceEEEEccccCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544321100    00  12356677776   777888887


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCC-CCccCCCCCCCCCCh
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADE-PPHVEGDVVKPDAGH  211 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~-~~~~e~~~~~~~~~~  211 (250)
                      +.++|+|||+|+                .|+.++.+++++|++.+ +++||++||..+|+.... .++.|+++..+. ..
T Consensus        78 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~-~~  156 (357)
T 1rkx_A           78 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-DP  156 (357)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-SH
T ss_pred             hcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC-Cc
Confidence            655899999998                25778999999999876 899999999999997653 467787776664 77


Q ss_pred             hHHHHHHHHh------------------CCcEEEEecCeeecCCCC
Q 025587          212 VQVEKYISEN------------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       212 y~~~k~~~e~------------------~~~~~ilRp~~i~G~~~~  239 (250)
                      |+..|...|.                  +++++++||+.+|||++.
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~  202 (357)
T 1rkx_A          157 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW  202 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCC
Confidence            8877744332                  789999999999999864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=4.5e-22  Score=174.89  Aligned_cols=150  Identities=18%  Similarity=0.267  Sum_probs=120.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC---C---CeEEEEEcCCCc--cccCCCCCCCcccch-hcCCceEEeCC---HH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS---G---HEVTIMTVGDEN--SDKMKKPPFNRFNEI-VSAGGKTVWGD---PA  142 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~---G---~~V~~l~R~~~~--~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~  142 (250)
                      |+||||    ||+||||++++++|+++   |   ++|++++|....  .+.+        ..+ ...+++++.+|   ++
T Consensus         1 M~vlVT----GatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~Dl~d~~   68 (337)
T 1r6d_A            1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL--------APVDADPRLRFVHGDIRDAG   68 (337)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG--------GGGTTCTTEEEEECCTTCHH
T ss_pred             CeEEEE----CCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh--------hhcccCCCeEEEEcCCCCHH
Confidence            579999    99999999999999997   8   999999997521  1111        111 12356677776   77


Q ss_pred             HHHhhhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          143 EVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      .+.+++.+  +|+|||+|+.                |+.++.++++++++.++++||++||.++|+.....+++|+++..
T Consensus        69 ~~~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  146 (337)
T 1r6d_A           69 LLARELRG--VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLE  146 (337)
T ss_dssp             HHHHHTTT--CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCC
T ss_pred             HHHHHhcC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCC
Confidence            88888865  8999999982                46789999999999999999999999999987666888888777


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      +. ..|+.+|...|.         +++++++||+.+|||+..
T Consensus       147 ~~-~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~  187 (337)
T 1r6d_A          147 PN-SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQH  187 (337)
T ss_dssp             CC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCC
T ss_pred             CC-CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCC
Confidence            65 788887755443         789999999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=3.4e-22  Score=178.43  Aligned_cols=160  Identities=17%  Similarity=0.127  Sum_probs=123.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-h---hcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-I---VSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~---~~~~v~~v~~D---~~~l~  145 (250)
                      |+|+||||    ||+||||++++++|+++|++|++++|+.+....   .....+.. .   ...+++++.+|   .+++.
T Consensus        23 M~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~   95 (375)
T 1t2a_A           23 MRNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT---GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV   95 (375)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC---TTTGGGC---------CEEEEECCTTCHHHHH
T ss_pred             cCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECCccccch---hhHHHHhhhhccccCCCceEEEccCCCHHHHH
Confidence            45799999    999999999999999999999999998653210   00000000 0   12356677776   77788


Q ss_pred             hhhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCC---CEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~---~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      +++++.++|+|||+||.                |+.++.++++++++.++   ++||++||.++|+.....+++|+++..
T Consensus        96 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~  175 (375)
T 1t2a_A           96 KIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY  175 (375)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC
T ss_pred             HHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCC
Confidence            88876558999999982                56789999999999887   899999999999987777889988877


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +. ..|+..|...|.         +++++++||+.+|||+...
T Consensus       176 ~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~  217 (375)
T 1t2a_A          176 PR-SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA  217 (375)
T ss_dssp             CC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT
T ss_pred             CC-ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCC
Confidence            65 789988865543         7899999999999997654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.89  E-value=3.6e-22  Score=176.16  Aligned_cols=152  Identities=15%  Similarity=0.173  Sum_probs=120.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+||||++++++|+++  |++|++++|.......      ..+..+...+++++.+|   ++.+.+++
T Consensus         4 m~~vlVT----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            4 FKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK------ANLEAILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG------GGTGGGCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEe----CCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh------hHHhhhccCCeEEEECCCCCHHHHHHHh
Confidence            4799999    99999999999999999  8999999997532110      01111223466777776   77888888


Q ss_pred             cCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC------------CCcc
Q 025587          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE------------PPHV  200 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~------------~~~~  200 (250)
                      ++  +|+|||+|+.                |+.++.+++++|++.++ +||++||..+|+....            .+++
T Consensus        74 ~~--~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~  150 (348)
T 1oc2_A           74 AK--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT  150 (348)
T ss_dssp             TT--CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred             hc--CCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcC
Confidence            87  6999999982                56789999999999888 9999999999986532            5788


Q ss_pred             CCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      |.++..+. ..|+..|...|.         +++++++||+.+|||+..
T Consensus       151 E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          151 AETNYNPS-SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH  197 (348)
T ss_dssp             TTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC
T ss_pred             CCCCCCCC-CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCC
Confidence            88877665 788887755543         789999999999999875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.89  E-value=2.8e-22  Score=179.70  Aligned_cols=150  Identities=22%  Similarity=0.183  Sum_probs=119.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+||||++|+++|+++||+|++++|+.+....           ....+++++.+|   .+++.++++
T Consensus        28 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           28 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------GGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEE----CCccHHHHHHHHHHHHCCCeEEEEECCCccchh-----------hccCCceEEECCCCCHHHHHHHhC
Confidence            46899999    999999999999999999999999998754321           112356667776   778888887


Q ss_pred             CCcccEEEeCCCc-----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC-----CCccCCC--CC
Q 025587          150 GVTFDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-----PPHVEGD--VV  205 (250)
Q Consensus       150 ~~~~d~Vi~~ag~-----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~-----~~~~e~~--~~  205 (250)
                      +  +|+|||+|+.                 |+.++.++++++++.++++||++||.++|+....     .+++|++  +.
T Consensus        93 ~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~  170 (379)
T 2c5a_A           93 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  170 (379)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             C--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCC
Confidence            6  8999999982                 5668999999999999999999999999986422     3466665  44


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .+. ..|+.+|...|.         +++++++||+.+|||+...
T Consensus       171 ~~~-~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~  213 (379)
T 2c5a_A          171 EPQ-DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTW  213 (379)
T ss_dssp             CCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCC
T ss_pred             CCC-ChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCc
Confidence            443 778877765543         7999999999999998653

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.89  E-value=2.9e-22  Score=179.37  Aligned_cols=149  Identities=17%  Similarity=0.155  Sum_probs=111.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .+|+||||    ||+||||++|+++|+++| ++|++++|..+... .+.          ...+++++.+|   ++.+.++
T Consensus        31 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~----------~~~~v~~~~~Dl~d~~~l~~~   96 (377)
T 2q1s_A           31 ANTNVMVV----GGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP----------DHPAVRFSETSITDDALLASL   96 (377)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC----------CCTTEEEECSCTTCHHHHHHC
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc----------CCCceEEEECCCCCHHHHHHH
Confidence            45799999    999999999999999999 99999999864432 111          12356667676   7778888


Q ss_pred             hcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhC-CCCEEEEEcCcccccCCCCCCcc--CCC---CC
Q 025587          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV--EGD---VV  205 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~~~~~~~--e~~---~~  205 (250)
                      +++  +|+|||+|+.                |+.++.+++++|++. ++++||++||.++|+.....+++  |++   +.
T Consensus        97 ~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  174 (377)
T 2q1s_A           97 QDE--YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSL  174 (377)
T ss_dssp             CSC--CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCS
T ss_pred             hhC--CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccc
Confidence            875  8999999983                467899999999998 89999999999999987666777  776   54


Q ss_pred             -CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCC
Q 025587          206 -KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       206 -~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~  238 (250)
                       .+. ..|+..|...|.         +++++++||+.+||++.
T Consensus       175 ~~~~-~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          175 HNND-SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             SCCC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             cCCC-CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence             444 778877755443         78999999999999987

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.89  E-value=5.5e-22  Score=174.16  Aligned_cols=153  Identities=20%  Similarity=0.166  Sum_probs=120.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCC--ccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      +|+||||    ||+||||++++++|+++|  ++|++++|...  ..+.+...     .  ...+++++.+|   .+.+.+
T Consensus         3 ~m~vlVT----GatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~   71 (336)
T 2hun_A            3 SMKLLVT----GGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL-----E--DDPRYTFVKGDVADYELVKE   71 (336)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTT-----T--TCTTEEEEECCTTCHHHHHH
T ss_pred             CCeEEEE----CCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhh-----c--cCCceEEEEcCCCCHHHHHH
Confidence            3689999    999999999999999996  99999998752  22222110     0  12356667776   778888


Q ss_pred             hhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCC-CEEEEEcCcccccCCCCCCccCCCCCCCCC
Q 025587          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~  209 (250)
                      ++.+  +|+|||+||.                |+.++.++++++++.+. ++||++||.++|+.....+++|+++..+. 
T Consensus        72 ~~~~--~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~-  148 (336)
T 2hun_A           72 LVRK--VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS-  148 (336)
T ss_dssp             HHHT--CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC-
T ss_pred             HhhC--CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC-
Confidence            8865  8999999983                57789999999998764 79999999999998766688898877765 


Q ss_pred             ChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          210 GHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       210 ~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ..|+.+|...|.         +++++++||+.+|||+...
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~  188 (336)
T 2hun_A          149 SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP  188 (336)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc
Confidence            789888755543         6899999999999998653

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=2.7e-22  Score=176.51  Aligned_cols=155  Identities=17%  Similarity=0.193  Sum_probs=116.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchh-cCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~-~~~v~~v~~D---~~~l~~~l  148 (250)
                      ||+||||    ||+||||++|+++|+++|++|++++|... .....       ...+. ..+++++.+|   ++++.+++
T Consensus         1 M~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~l~~~~~~~~~~~Dl~d~~~~~~~~   69 (347)
T 1orr_A            1 MAKLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-------LHWLSSLGNFEFVHGDIRNKNDVTRLI   69 (347)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHH-------HHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEe----CCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhh-------hhhhccCCceEEEEcCCCCHHHHHHHH
Confidence            3689999    99999999999999999999999998532 11100       00111 1236666666   77788888


Q ss_pred             cCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCCCCC-------------
Q 025587          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP-------------  198 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~~-------------  198 (250)
                      ++.++|+|||+|+.                |+.++.++++++++.+++ +||++||.++|+.....+             
T Consensus        70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           70 TKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             hccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCccccccccccccc
Confidence            76458999999982                577899999999998885 999999999999754433             


Q ss_pred             ---ccCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          199 ---HVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       199 ---~~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                         ++|..+..+. ..|+..|...|.         +++++++||+.|||++...
T Consensus       150 ~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~  202 (347)
T 1orr_A          150 PNGYDESTQLDFH-SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFA  202 (347)
T ss_dssp             TTCBCTTSCCCCC-HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCC
T ss_pred             ccCccccCCCCCC-CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCC
Confidence               4555555544 678877755443         7899999999999998643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.88  E-value=7.5e-22  Score=177.20  Aligned_cols=160  Identities=19%  Similarity=0.169  Sum_probs=121.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHH-hCCCeEEEEEcCCCccccCCCCC-CCcc----cchh----cCC---ceEEeCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKPP-FNRF----NEIV----SAG---GKTVWGD  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~G~~V~~l~R~~~~~~~~~~~~-~~~~----~~~~----~~~---v~~v~~D  140 (250)
                      +|+||||    ||+||||++|+++|+ ++|++|++++|..+......... ...+    ..+.    ..+   ++++.+|
T Consensus         2 ~m~vlVT----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (397)
T 1gy8_A            2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (397)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECC
Confidence            3689999    999999999999999 99999999999764320000000 0000    0000    113   6677776


Q ss_pred             ---HHHHHhhhcCCc-ccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC-----
Q 025587          141 ---PAEVGNVVGGVT-FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD-----  195 (250)
Q Consensus       141 ---~~~l~~~l~~~~-~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~-----  195 (250)
                         ++.+.++++... +|+|||+|+.                |+.++.+++++|++.++++||++||.++|+...     
T Consensus        78 l~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~  157 (397)
T 1gy8_A           78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (397)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             CCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccc
Confidence               677888887433 8999999982                577899999999999999999999999998765     


Q ss_pred             --CCCccCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCC
Q 025587          196 --EPPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 --~~~~~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~  238 (250)
                        ..+++|+++..+. ..|+.+|...|.         +++++++||+.+|||+.
T Consensus       158 ~~~~~~~E~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          158 TNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE  210 (397)
T ss_dssp             -CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCT
T ss_pred             ccccCcCccCCCCCC-CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCc
Confidence              5688898887665 789888765543         78999999999999974

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.88  E-value=1.5e-22  Score=175.15  Aligned_cols=145  Identities=15%  Similarity=0.133  Sum_probs=114.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|+||||    ||+||||++|+++|+++|+      +.......             ...+..+..|++.+.+++++.+
T Consensus         5 ~~~~vlVt----GatG~iG~~l~~~L~~~g~------~~~~~~~~-------------~~~~~~D~~d~~~~~~~~~~~~   61 (319)
T 4b8w_A            5 QSMRILVT----GGSGLVGKAIQKVVADGAG------LPGEDWVF-------------VSSKDADLTDTAQTRALFEKVQ   61 (319)
T ss_dssp             CCCEEEEE----TCSSHHHHHHHHHHHTTTC------CTTCEEEE-------------CCTTTCCTTSHHHHHHHHHHSC
T ss_pred             cCCeEEEE----CCCcHHHHHHHHHHHhcCC------cccccccc-------------cCceecccCCHHHHHHHHhhcC
Confidence            46899999    9999999999999999998      11111000             0011223346889999998767


Q ss_pred             ccEEEeCCCc-----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC----CCCCCCCh
Q 025587          153 FDVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGH  211 (250)
Q Consensus       153 ~d~Vi~~ag~-----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~----~~~~~~~~  211 (250)
                      +|+|||+|+.                 |+.++.+++++|++.++++|||+||.++|+.....+++|++    +..+....
T Consensus        62 ~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  141 (319)
T 4b8w_A           62 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFG  141 (319)
T ss_dssp             CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHH
T ss_pred             CCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcch
Confidence            9999999983                 57789999999999999999999999999998888899987    45554335


Q ss_pred             hHHHHHHHH---------hCCcEEEEecCeeecCCCCC
Q 025587          212 VQVEKYISE---------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       212 y~~~k~~~e---------~~~~~~ilRp~~i~G~~~~~  240 (250)
                      |+.+|...|         .+++++++||+.+|||+.+.
T Consensus       142 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~  179 (319)
T 4b8w_A          142 YSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNF  179 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCC
Confidence            887776555         37999999999999998764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.88  E-value=5.6e-22  Score=174.39  Aligned_cols=148  Identities=21%  Similarity=0.212  Sum_probs=116.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH----HHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~----~~l~~~l~  149 (250)
                      |+||||    ||+||||++++++|+++ ||+|++++|+.+....+.          ...+++++.+|.    +.+.++++
T Consensus         1 m~vlVt----GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~   66 (345)
T 2bll_A            1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYHVK   66 (345)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------TCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CeEEEE----CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------cCCCeEEEeccccCcHHHHHhhcc
Confidence            589999    99999999999999998 899999999875544321          123567777772    34777777


Q ss_pred             CCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC------C
Q 025587          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK------P  207 (250)
Q Consensus       150 ~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~------~  207 (250)
                      +  +|+|||+|+.                |+.++.+++++|++.+ ++||++||.++|+.....+++|+++..      .
T Consensus        67 ~--~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~  143 (345)
T 2bll_A           67 K--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (345)
T ss_dssp             H--CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             C--CCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccC
Confidence            5  7999999982                4567899999999988 899999999999987766778876531      1


Q ss_pred             CCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          208 DAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       208 ~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      ..+.|+..|...|.         +++++++||+.+|||+..
T Consensus       144 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~  184 (345)
T 2bll_A          144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD  184 (345)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCC
T ss_pred             cccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcc
Confidence            12468877755443         789999999999999864

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.88  E-value=4.4e-22  Score=170.39  Aligned_cols=147  Identities=19%  Similarity=0.198  Sum_probs=122.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+++...              ..+++++.+|   .+++.+++++
T Consensus         3 ~k~vlVT----Gasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~~   64 (267)
T 3rft_A            3 MKRLLVT----GAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVAG   64 (267)
T ss_dssp             EEEEEEE----STTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHcC
Confidence            4789999    99999999999999999999999999874432              2245566665   8889999886


Q ss_pred             CcccEEEeCCC------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccC-CCCCCccCCCCCCCCCChhHHHHH
Q 025587          151 VTFDVVLDNNG------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       151 ~~~d~Vi~~ag------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~-~~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                        +|+|||+||            .|+.++.++++++++.+.++||++||..+|+. ....+++|+.+..+. ..|+.+|.
T Consensus        65 --~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~-~~Y~~sK~  141 (267)
T 3rft_A           65 --CDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD-GLYGVSKC  141 (267)
T ss_dssp             --CSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC-SHHHHHHH
T ss_pred             --CCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC-ChHHHHHH
Confidence              899999998            47889999999999999999999999999975 344577888877765 78998885


Q ss_pred             HHH---------hCCcEEEEecCeeecCCCCCC
Q 025587          218 ISE---------NFSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       218 ~~e---------~~~~~~ilRp~~i~G~~~~~~  241 (250)
                      ..|         .++++++|||+.|||+..+..
T Consensus       142 ~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~  174 (267)
T 3rft_A          142 FGENLARMYFDKFGQETALVRIGSCTPEPNNYR  174 (267)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT
T ss_pred             HHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC
Confidence            444         379999999999999876554

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.88  E-value=2e-22  Score=167.14  Aligned_cols=145  Identities=17%  Similarity=0.168  Sum_probs=111.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+++....           +...+++++.+|   ++.  +.+++ 
T Consensus         1 MkilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~~~D~~d~~~--~~~~~-   62 (224)
T 3h2s_A            1 MKIAVL----GATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD-----------RLGATVATLVKEPLVLTE--ADLDS-   62 (224)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------HTCTTSEEEECCGGGCCH--HHHTT-
T ss_pred             CEEEEE----cCCCHHHHHHHHHHHHCCCEEEEEEeccccccc-----------ccCCCceEEecccccccH--hhccc-
Confidence            579999    999999999999999999999999998755442           223467788888   333  56666 


Q ss_pred             cccEEEeCCCc---------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC---CCccCCCCCCCCCChhHHHHHHH
Q 025587          152 TFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE---PPHVEGDVVKPDAGHVQVEKYIS  219 (250)
Q Consensus       152 ~~d~Vi~~ag~---------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~---~~~~e~~~~~~~~~~y~~~k~~~  219 (250)
                       +|+|||++|.         |+.++++++++|++.+ ++||++||.+.+.....   .+.+|.....+. ..|+..|...
T Consensus        63 -~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~sK~~~  139 (224)
T 3h2s_A           63 -VDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ-PWYDGALYQY  139 (224)
T ss_dssp             -CSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS-TTHHHHHHHH
T ss_pred             -CCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc-hhhHHHHHHH
Confidence             7999999996         7899999999999999 99999999866554322   133444433333 6688777554


Q ss_pred             H--------hCCcEEEEecCeeecCCCCC
Q 025587          220 E--------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       220 e--------~~~~~~ilRp~~i~G~~~~~  240 (250)
                      |        .+++++++||+.+||++...
T Consensus       140 e~~~~~~~~~~i~~~ivrp~~v~g~~~~~  168 (224)
T 3h2s_A          140 YEYQFLQMNANVNWIGISPSEAFPSGPAT  168 (224)
T ss_dssp             HHHHHHTTCTTSCEEEEEECSBCCCCCCC
T ss_pred             HHHHHHHhcCCCcEEEEcCccccCCCccc
Confidence            3        36999999999999995543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=5.1e-22  Score=174.66  Aligned_cols=155  Identities=23%  Similarity=0.276  Sum_probs=119.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+||||++++++|+++||+|++++|........    ...+......++.++.+|   ++.+.+++++.
T Consensus         1 m~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (338)
T 1udb_A            1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhH----HHHHHhhcCCcceEEEccCCCHHHHHHHhhcc
Confidence            489999    9999999999999999999999998754321100    000111112345666666   77788888654


Q ss_pred             cccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                      .+|+|||+||.                |+.++.++++++++.++++||++||.++|+.....+++|+.+..+....|+.+
T Consensus        73 ~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~s  152 (338)
T 1udb_A           73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHH
Confidence            58999999982                57789999999999899999999999999987777888887765534789887


Q ss_pred             HHHHHh----------CCcEEEEecCeeecCC
Q 025587          216 KYISEN----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       216 k~~~e~----------~~~~~ilRp~~i~G~~  237 (250)
                      |...|.          +++++++||+++||++
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~  184 (338)
T 1udb_A          153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEeeceecCCC
Confidence            755443          5899999999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.88  E-value=3.6e-22  Score=165.65  Aligned_cols=141  Identities=20%  Similarity=0.283  Sum_probs=111.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l~~  150 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+....+             .+++++.+|    ++++.+++++
T Consensus         1 M~ilIt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~   63 (219)
T 3dqp_A            1 MKIFIV----GSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLHG   63 (219)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTTT
T ss_pred             CeEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHcC
Confidence            589999    9999999999999999999999999987654421             355666665    6678888886


Q ss_pred             CcccEEEeCCC--------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH-----H
Q 025587          151 VTFDVVLDNNG--------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK-----Y  217 (250)
Q Consensus       151 ~~~d~Vi~~ag--------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k-----~  217 (250)
                        +|+|||++|        .|+.++.++++++++.++++||++||.++|+..   +..| ++..+. ..|+..|     +
T Consensus        64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~-~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDAL-KDYYIAKHFADLY  136 (219)
T ss_dssp             --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHT-HHHHHHHHHHHHH
T ss_pred             --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccc-cHHHHHHHHHHHH
Confidence              899999999        478999999999999999999999998877643   3333 222222 5566555     4


Q ss_pred             H-HHhCCcEEEEecCeeecCCCC
Q 025587          218 I-SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       218 ~-~e~~~~~~ilRp~~i~G~~~~  239 (250)
                      + .+.+++++++||+.+||+...
T Consensus       137 ~~~~~~i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          137 LTKETNLDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             HHHSCCCEEEEEEECSEECSCCC
T ss_pred             HHhccCCcEEEEeCceEecCCCC
Confidence            4 444799999999999998654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.88  E-value=1.3e-21  Score=172.12  Aligned_cols=151  Identities=21%  Similarity=0.255  Sum_probs=119.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+||||++|+++|+++|++|++++|+.+......+.       +  .+++++.+|   .+++.+++
T Consensus        18 ~~~~~vlVT----GasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------l--~~v~~~~~Dl~d~~~~~~~~   84 (330)
T 2pzm_A           18 GSHMRILIT----GGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPP-------V--AGLSVIEGSVTDAGLLERAF   84 (330)
T ss_dssp             TTCCEEEEE----TTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCS-------C--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhc-------c--CCceEEEeeCCCHHHHHHHH
Confidence            345799999    9999999999999999999999999976433211111       1  356666666   77788888


Q ss_pred             cCCcccEEEeCCCc-------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCC--CccCCCCCCCCCChhH
Q 025587          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP--PHVEGDVVKPDAGHVQ  213 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~-------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~--~~~e~~~~~~~~~~y~  213 (250)
                      +...+|+|||+||.             |+.++.++++++++.++++||++||.++|+.....  +++|++  .+. ..|+
T Consensus        85 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~-~~Y~  161 (330)
T 2pzm_A           85 DSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APF-TSYG  161 (330)
T ss_dssp             HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCC-SHHH
T ss_pred             hhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCC-ChHH
Confidence            72238999999983             46789999999999899999999999999876544  777776  333 6788


Q ss_pred             HHHHHHHh-----CCcEEEEecCeeecCCC
Q 025587          214 VEKYISEN-----FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       214 ~~k~~~e~-----~~~~~ilRp~~i~G~~~  238 (250)
                      ..|...|.     +++++++||+++|||+.
T Consensus       162 ~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~  191 (330)
T 2pzm_A          162 ISKTAGEAFLMMSDVPVVSLRLANVTGPRL  191 (330)
T ss_dssp             HHHHHHHHHHHTCSSCEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHcCCCEEEEeeeeeECcCC
Confidence            88876665     68999999999999986

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.88  E-value=3.6e-22  Score=172.57  Aligned_cols=139  Identities=19%  Similarity=0.290  Sum_probs=116.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |+||||    ||+||||++++++|+ +||+|++++|+.+.                   +..+..|++.+.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~-~g~~V~~~~r~~~~-------------------~~~D~~d~~~~~~~~~~~~~d   56 (299)
T 1n2s_A            1 MNILLF----GKTGQVGWELQRSLA-PVGNLIALDVHSKE-------------------FCGDFSNPKGVAETVRKLRPD   56 (299)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTT-TTSEEEEECTTCSS-------------------SCCCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEE----CCCCHHHHHHHHHhh-cCCeEEEecccccc-------------------ccccCCCHHHHHHHHHhcCCC
Confidence            589999    999999999999999 89999999997621                   112233788888888765589


Q ss_pred             EEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||+|+.                |+.++.+++++|++.++ +|||+||.++|+.....+++|+++..+. +.|+..|..
T Consensus        57 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~-~~Y~~sK~~  134 (299)
T 1n2s_A           57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLA  134 (299)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc-cHHHHHHHH
Confidence            99999982                46789999999999887 8999999999998877789999888775 788888766


Q ss_pred             HHh-----CCcEEEEecCeeecCCCC
Q 025587          219 SEN-----FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       219 ~e~-----~~~~~ilRp~~i~G~~~~  239 (250)
                      .|.     ..+++++||+.+||++..
T Consensus       135 ~E~~~~~~~~~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          135 GEKALQDNCPKHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             HHHHHHHHCSSEEEEEECSEECSSSC
T ss_pred             HHHHHHHhCCCeEEEeeeeecCCCcC
Confidence            665     468999999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=2.1e-22  Score=175.75  Aligned_cols=141  Identities=21%  Similarity=0.319  Sum_probs=114.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      +|+||||    ||+||||++|+++|+++|++|++++|..+                      .+..|.+++.++++..++
T Consensus         3 ~~~ilVt----GatG~iG~~l~~~L~~~g~~v~~~~r~~~----------------------~D~~d~~~~~~~~~~~~~   56 (321)
T 1e6u_A            3 KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASERI   56 (321)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEecCcc----------------------CCccCHHHHHHHHHhcCC
Confidence            4789999    99999999999999999999999887531                      112378888888873338


Q ss_pred             cEEEeCCCc-----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC----CCCCCCChh
Q 025587          154 DVVLDNNGK-----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD----VVKPDAGHV  212 (250)
Q Consensus       154 d~Vi~~ag~-----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~----~~~~~~~~y  212 (250)
                      |+|||+|+.                 |+.++.+++++|++.++++||++||.++|+.....+++|++    +..+..+.|
T Consensus        57 d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y  136 (321)
T 1e6u_A           57 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY  136 (321)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred             CEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCcc
Confidence            999999983                 46789999999999999999999999999987777888876    344332478


Q ss_pred             HHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          213 QVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       213 ~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +..|...|.         +++++++||+.+|||+...
T Consensus       137 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~  173 (321)
T 1e6u_A          137 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNF  173 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCC
Confidence            877755443         7999999999999998753

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=1.2e-21  Score=173.71  Aligned_cols=154  Identities=17%  Similarity=0.157  Sum_probs=119.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      |+||||    ||+||||++|+++|+++ |++|++++|..  +..+.+.+.     .  ...+++++.+|   .+.+.+++
T Consensus         1 MkvlVT----GasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~   69 (361)
T 1kew_A            1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-----S--ESNRYNFEHADICDSAEITRIF   69 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-----T--TCTTEEEEECCTTCHHHHHHHH
T ss_pred             CEEEEE----CCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh-----h--cCCCeEEEECCCCCHHHHHHHH
Confidence            479999    99999999999999998 79999999975  222222111     0  12356677776   77888888


Q ss_pred             cCCcccEEEeCCCc----------------CHHhHHHHHHHHHhC--CCC-------EEEEEcCcccccCCCC--C----
Q 025587          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSS--GVK-------QFLFISSAGIYKPADE--P----  197 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~--~~~-------~~v~iSS~~vy~~~~~--~----  197 (250)
                      +...+|+|||+||.                |+.++.++++++++.  +++       +||++||.++|+....  .    
T Consensus        70 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           70 EQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             hhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            73348999999983                567899999999997  877       9999999999987532  1    


Q ss_pred             ----CccCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          198 ----PHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       198 ----~~~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                          +++|+++..+. +.|+.+|...|.         +++++++||+.||||+...
T Consensus       150 ~~~~~~~E~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~  204 (361)
T 1kew_A          150 VTLPLFTETTAYAPS-SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP  204 (361)
T ss_dssp             SCCCCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT
T ss_pred             ccCCCCCCCCCCCCC-CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc
Confidence                67888777665 789888755543         7999999999999998653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.88  E-value=3e-22  Score=174.48  Aligned_cols=144  Identities=19%  Similarity=0.221  Sum_probs=107.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |+|+||||    ||+||||++++++|+++||+|++++|+.+. .              . -+..+..|++++.+++++.+
T Consensus         1 m~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~--------------~-~~~~Dl~d~~~~~~~~~~~~   60 (315)
T 2ydy_A            1 MNRRVLVT----GATGLLGRAVHKEFQQNNWHAVGCGFRRAR-P--------------K-FEQVNLLDSNAVHHIIHDFQ   60 (315)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHC
T ss_pred             CCCeEEEE----CCCcHHHHHHHHHHHhCCCeEEEEccCCCC-C--------------C-eEEecCCCHHHHHHHHHhhC
Confidence            46899999    999999999999999999999999987532 0              0 12233335777777776545


Q ss_pred             ccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH
Q 025587          153 FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (250)
Q Consensus       153 ~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k  216 (250)
                      +|+|||+||                .|+.++.++++++++.++ +||++||..+|+. ...+++|+++..+. ..|+..|
T Consensus        61 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~-~~Y~~sK  137 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPL-NLYGKTK  137 (315)
T ss_dssp             CSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCC-SHHHHHH
T ss_pred             CCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCc-CHHHHHH
Confidence            899999998                267889999999999887 9999999999998 45688998887765 7888777


Q ss_pred             HHHHh-----CCcEEEEecCeeecCCCC
Q 025587          217 YISEN-----FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       217 ~~~e~-----~~~~~ilRp~~i~G~~~~  239 (250)
                      ...|.     +++++++||+.|||+...
T Consensus       138 ~~~e~~~~~~~~~~~~lR~~~v~G~~~~  165 (315)
T 2ydy_A          138 LDGEKAVLENNLGAAVLRIPILYGEVEK  165 (315)
T ss_dssp             HHHHHHHHHHCTTCEEEEECSEECSCSS
T ss_pred             HHHHHHHHHhCCCeEEEeeeeeeCCCCc
Confidence            66654     688999999999999865

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=1.2e-21  Score=173.80  Aligned_cols=152  Identities=15%  Similarity=0.257  Sum_probs=119.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ++|+||||    ||+||||++|+++|+++| ++|++++|..+... ..     .+..   ..+..+..|.+.+.+++++.
T Consensus        45 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-----~~~~---~~~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           45 EGRMIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-----NLVD---LNIADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             ---CEEEE----TTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-----GTTT---SCCSEEEEHHHHHHHHHTTC
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-----cccC---ceEeeecCcHHHHHHHHhhc
Confidence            34789999    999999999999999999 99999999764421 00     0011   11344555688888888642


Q ss_pred             ---cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          152 ---TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       152 ---~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                         ++|+|||+|+              .|+.++.++++++++.++ +||++||.++|+.....+++|+++..+. ..|+.
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~  189 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVFGY  189 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS-SHHHH
T ss_pred             ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC-ChhHH
Confidence               4899999998              367889999999999888 9999999999998776688898887775 78888


Q ss_pred             HHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          215 EKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       215 ~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      .|...|.         +++++++||+.||||+..
T Consensus       190 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~  223 (357)
T 2x6t_A          190 SKFLFDEYVRQILPEANSQIVGFRYFNVYGPREG  223 (357)
T ss_dssp             HHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCT
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCC
Confidence            8866554         589999999999999865

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=1.9e-22  Score=177.42  Aligned_cols=158  Identities=23%  Similarity=0.223  Sum_probs=111.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~  147 (250)
                      .|+|+||||    ||+||||++|+++|+++||+|++++|+.+......     .+..+ ...+++++.+|   ++.+.++
T Consensus         7 ~~~~~vlVT----GatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (338)
T 2rh8_A            7 IGKKTACVV----GGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-----HLLELQELGDLKIFRADLTDELSFEAP   77 (338)
T ss_dssp             --CCEEEEE----CTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-----HHHHHGGGSCEEEEECCTTTSSSSHHH
T ss_pred             CCCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-----HHHhcCCCCcEEEEecCCCChHHHHHH
Confidence            357899999    99999999999999999999999999765432110     00011 12346667776   5677888


Q ss_pred             hcCCcccEEEeCCC---------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcc-cccCC---CCCCccCCCCC--
Q 025587          148 VGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPA---DEPPHVEGDVV--  205 (250)
Q Consensus       148 l~~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~-vy~~~---~~~~~~e~~~~--  205 (250)
                      +++  +|+|||+|+               .|+.++.+++++|++.+ ++||||+||.+ +|+..   ...+++|+++.  
T Consensus        78 ~~~--~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~  155 (338)
T 2rh8_A           78 IAG--CDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDI  155 (338)
T ss_dssp             HTT--CSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC
T ss_pred             HcC--CCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccch
Confidence            876  799999987               25778999999999986 99999999987 44321   11256666421  


Q ss_pred             ------C-----CCCChhHHHHHHH----HhCCcEEEEecCeeecCCCCC
Q 025587          206 ------K-----PDAGHVQVEKYIS----ENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ------~-----~~~~~y~~~k~~~----e~~~~~~ilRp~~i~G~~~~~  240 (250)
                            .     ...+|...|+++.    +.+++++++||+.||||+...
T Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~  205 (338)
T 2rh8_A          156 EFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTS  205 (338)
T ss_dssp             -------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSS
T ss_pred             hhccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence                  1     1123334444332    247999999999999998654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=7.9e-22  Score=170.04  Aligned_cols=136  Identities=24%  Similarity=0.278  Sum_probs=114.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ...++||||    ||+||||++++++|+++|++|++++|..                       .+..|.+.+.+++++.
T Consensus        10 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------------~Dl~d~~~~~~~~~~~   62 (292)
T 1vl0_A           10 HHHMKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK   62 (292)
T ss_dssp             --CEEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH
T ss_pred             cccceEEEE----CCCChHHHHHHHHHHhCCCeEEeccCcc-----------------------CCCCCHHHHHHHHHhc
Confidence            346899999    9999999999999999999999999862                       1112788888888743


Q ss_pred             cccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                      ++|+|||+|+.                |+.++.++++++++.++ +||++||.++|+.....+++|+++..+. +.|+..
T Consensus        63 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~-~~Y~~s  140 (292)
T 1vl0_A           63 KPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKT  140 (292)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHH
T ss_pred             CCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc-cHHHHH
Confidence            48999999982                46779999999999888 9999999999998776789999888775 788888


Q ss_pred             HHHHHh-----CCcEEEEecCeeecC
Q 025587          216 KYISEN-----FSNWASFRPQYMIGS  236 (250)
Q Consensus       216 k~~~e~-----~~~~~ilRp~~i~G~  236 (250)
                      |...|.     ..+++++||+.+||+
T Consensus       141 K~~~E~~~~~~~~~~~~lR~~~v~G~  166 (292)
T 1vl0_A          141 KLEGENFVKALNPKYYIVRTAWLYGD  166 (292)
T ss_dssp             HHHHHHHHHHHCSSEEEEEECSEESS
T ss_pred             HHHHHHHHHhhCCCeEEEeeeeeeCC
Confidence            866665     578999999999999

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=1.5e-21  Score=174.60  Aligned_cols=160  Identities=16%  Similarity=0.123  Sum_probs=121.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc--cCCCCCCCcccchhcC-CceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSA-GGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~-~v~~v~~D---~~~l~~  146 (250)
                      |+|+||||    ||+||||++|+++|+++|++|++++|+.+...  .+... ..... .... +++++.+|   .+.+.+
T Consensus        27 M~k~vlVt----GatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~  100 (381)
T 1n7h_A           27 PRKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI-YIDPH-NVNKALMKLHYADLTDASSLRR  100 (381)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT-C---------CCEEEEECCTTCHHHHHH
T ss_pred             hCCeEEEE----cCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhh-hhccc-cccccceEEEECCCCCHHHHHH
Confidence            44799999    99999999999999999999999999875421  11100 00000 0012 56677776   677888


Q ss_pred             hhcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCC-----EEEEEcCcccccCCCCCCccCCCCC
Q 025587          147 VVGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVK-----QFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~-----~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      ++++.++|+|||+|+.                |+.++.++++++++.+++     +||++||.++|+.... +++|+++.
T Consensus       101 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~  179 (381)
T 1n7h_A          101 WIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPF  179 (381)
T ss_dssp             HHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCC
T ss_pred             HHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCC
Confidence            8876558999999983                466899999999987765     9999999999998766 88998887


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .+. ..|+..|...|.         +++++++|+.++|||+...
T Consensus       180 ~~~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~  222 (381)
T 1n7h_A          180 HPR-SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE  222 (381)
T ss_dssp             CCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT
T ss_pred             CCC-CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC
Confidence            765 789888865543         6889999999999998654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=1.8e-21  Score=173.18  Aligned_cols=160  Identities=18%  Similarity=0.119  Sum_probs=119.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+||||++++++|+++|++|++++|+.+..  +.+.... ... .....+++++.+|   .+++.+++
T Consensus         1 m~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIY-QDP-HTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHh-hcc-ccCCCceEEEECCCCCHHHHHHHH
Confidence            4789999    9999999999999999999999999976431  1111000 000 0012345566665   77888888


Q ss_pred             cCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCC---CEEEEEcCcccccCCCCCCccCCCCCCCCC
Q 025587          149 GGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~---~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~  209 (250)
                      ++.++|+|||+||.                |+.++.++++++++.++   ++||++||..+|+.....+++|+++..+. 
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~-  153 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR-  153 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC-
T ss_pred             HhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC-
Confidence            76558999999982                56789999999999887   89999999999998776788998887765 


Q ss_pred             ChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          210 GHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       210 ~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ..|+.+|...|.         +++++++|+.++|||+...
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~  193 (372)
T 1db3_A          154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGE  193 (372)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCC
Confidence            789988865543         6899999999999997654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=1.7e-21  Score=168.83  Aligned_cols=149  Identities=15%  Similarity=0.247  Sum_probs=118.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC---
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV---  151 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~---  151 (250)
                      +||||    ||+||||++|+++|+++| ++|++++|..+....         ..+....+..+..|.+.+.+++++.   
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~   67 (310)
T 1eq2_A            1 MIIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLNIADYMDKEDFLIQIMAGEEFG   67 (310)
T ss_dssp             CEEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG---------HHHHTSCCSEEEEHHHHHHHHHTTCCCS
T ss_pred             CEEEE----cCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh---------hhcCcceeccccccHHHHHHHHhccccC
Confidence            58999    999999999999999999 999999997643210         0011111334455688888888752   


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHH
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                      ++|+|||+|+              .|+.++.++++++++.++ +||++||.++|+.....+++|+++..+. ..|+..|.
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~-~~Y~~sK~  145 (310)
T 1eq2_A           68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL-NVYGYSKF  145 (310)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS-SHHHHHHH
T ss_pred             CCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC-ChhHHHHH
Confidence            5899999998              367789999999999899 9999999999998776688888877775 78888776


Q ss_pred             HHHh---------CCcEEEEecCeeecCCCC
Q 025587          218 ISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       218 ~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      ..|.         +++++++||+.+|||+..
T Consensus       146 ~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          146 LFDEYVRQILPEANSQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCG
T ss_pred             HHHHHHHHHHHHcCCCEEEEeCCcEECcCCC
Confidence            5554         589999999999999865

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.87  E-value=1.7e-21  Score=171.08  Aligned_cols=156  Identities=20%  Similarity=0.127  Sum_probs=123.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+||||++++++|+++||+|++++|+.+....      ..+..+ ...+++++.+|   .+++.++++
T Consensus         3 ~~~vlVt----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   72 (345)
T 2z1m_A            3 GKRALIT----GIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS------WRLKELGIENDVKIIHMDLLEFSNIIRTIE   72 (345)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT------HHHHHTTCTTTEEECCCCTTCHHHHHHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCCccccc------ccHhhccccCceeEEECCCCCHHHHHHHHH
Confidence            4799999    999999999999999999999999998754321      000001 01245555555   778888887


Q ss_pred             CCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCC-CEEEEEcCcccccCCCCCCccCCCCCCCCCChh
Q 025587          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       150 ~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y  212 (250)
                      +.++|+|||+||.                |+.++.++++++++.++ ++||++||..+|+.....+++|.++..+. ..|
T Consensus        73 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~-~~Y  151 (345)
T 2z1m_A           73 KVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR-SPY  151 (345)
T ss_dssp             HHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHH
T ss_pred             hcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC-Chh
Confidence            6558999999982                56789999999998887 89999999999998877788888877765 789


Q ss_pred             HHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          213 QVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       213 ~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      +.+|...|.         +++++++|+.++|||+...
T Consensus       152 ~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~  188 (345)
T 2z1m_A          152 AVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGI  188 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCT
T ss_pred             HHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCC
Confidence            888765543         6889999999999997543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=8.4e-22  Score=168.16  Aligned_cols=141  Identities=18%  Similarity=0.165  Sum_probs=116.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+...              ..+++++.+|   ++.+.+++++
T Consensus         2 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~~   63 (267)
T 3ay3_A            2 LNRLLVT----GAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------------EAHEEIVACDLADAQAVHDLVKD   63 (267)
T ss_dssp             EEEEEEE----STTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------------CTTEEECCCCTTCHHHHHHHHTT
T ss_pred             CceEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------------CCCccEEEccCCCHHHHHHHHcC
Confidence            5789999    99999999999999999999999999874321              0134445555   7888898886


Q ss_pred             CcccEEEeCCC------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC-CCCCccCCCCCCCCCChhHHHHH
Q 025587          151 VTFDVVLDNNG------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       151 ~~~d~Vi~~ag------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~-~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                        +|+|||+++            .|+.++.++++++++.++++||++||..+|+.. ...+++|+++..+. ..|+..|.
T Consensus        64 --~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~-~~Y~~sK~  140 (267)
T 3ay3_A           64 --CDGIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD-SLYGLSKC  140 (267)
T ss_dssp             --CSEEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC-SHHHHHHH
T ss_pred             --CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC-ChHHHHHH
Confidence              899999998            367889999999999999999999999999874 35678998888775 78887775


Q ss_pred             HHHh---------CCcEEEEecCeeec
Q 025587          218 ISEN---------FSNWASFRPQYMIG  235 (250)
Q Consensus       218 ~~e~---------~~~~~ilRp~~i~G  235 (250)
                      ..|.         +++++++||+.+|+
T Consensus       141 ~~e~~~~~~~~~~gi~~~~lrp~~v~~  167 (267)
T 3ay3_A          141 FGEDLASLYYHKFDIETLNIRIGSCFP  167 (267)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEEECBCSS
T ss_pred             HHHHHHHHHHHHcCCCEEEEeceeecC
Confidence            5443         69999999999985

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=2.3e-21  Score=174.22  Aligned_cols=161  Identities=15%  Similarity=0.124  Sum_probs=117.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-------cCCCC-----CCCcccchhcCCceEEeCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-------KMKKP-----PFNRFNEIVSAGGKTVWGD  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-------~~~~~-----~~~~~~~~~~~~v~~v~~D  140 (250)
                      .+++||||    ||+||||++|+++|+++||+|++++|......       .+...     ....+......+++++.+|
T Consensus        10 ~~~~vlVT----G~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~D   85 (404)
T 1i24_A           10 HGSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGD   85 (404)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESC
T ss_pred             CCCeEEEe----CCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECC
Confidence            35799999    99999999999999999999999998642110       00000     0000000123457777777


Q ss_pred             ---HHHHHhhhcCCcccEEEeCCCc-------------------CHHhHHHHHHHHHhCCC-CEEEEEcCcccccCCCCC
Q 025587          141 ---PAEVGNVVGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEP  197 (250)
Q Consensus       141 ---~~~l~~~l~~~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~  197 (250)
                         .+++.+++++.++|+|||+||.                   |+.++.+++++|++.++ ++||++||.++|+... .
T Consensus        86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~  164 (404)
T 1i24_A           86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-I  164 (404)
T ss_dssp             TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-S
T ss_pred             CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-C
Confidence               6778888876558999999982                   56789999999999887 5999999999998765 3


Q ss_pred             CccCC--------------CCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          198 PHVEG--------------DVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~--------------~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      +++|+              .+..+. +.|+.+|...|.         +++++++||+.||||+..
T Consensus       165 ~~~E~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~  228 (404)
T 1i24_A          165 DIEEGYITITHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTD  228 (404)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCT
T ss_pred             CCCccccccccccccccccCCCCCC-ChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCC
Confidence            56665              233443 778888765443         799999999999999864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.87  E-value=3.4e-21  Score=169.53  Aligned_cols=149  Identities=23%  Similarity=0.266  Sum_probs=116.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+||||++++++|+++|++|++++|..+... .+..        +  .+++++.+|   ++.+.+++
T Consensus        20 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~--------~--~~~~~~~~Dl~d~~~~~~~~   85 (333)
T 2q1w_A           20 HMKKVFIT----GICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD--------H--PNLTFVEGSIADHALVNQLI   85 (333)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC--------C--TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh--------c--CCceEEEEeCCCHHHHHHHH
Confidence            35799999    99999999999999999999999999764322 1110        1  356666666   77788888


Q ss_pred             cCCcccEEEeCCCc-------------CHHhHHHHHHHHHhCCCCEEEEEcCccccc----CCCCCCccCCCCCCCCCCh
Q 025587          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYK----PADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~-------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~----~~~~~~~~e~~~~~~~~~~  211 (250)
                      ++.++|+|||+||.             |+.++.++++++++.++++||++||.++|+    .... +++|++  .+....
T Consensus        86 ~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~  162 (333)
T 2q1w_A           86 GDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSS  162 (333)
T ss_dssp             HHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCH
T ss_pred             hccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCc
Confidence            76458999999983             467899999999999999999999999998    5444 777776  332267


Q ss_pred             hHHHHHHHHh-----CCcEEEEecCeeecCCC
Q 025587          212 VQVEKYISEN-----FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       212 y~~~k~~~e~-----~~~~~ilRp~~i~G~~~  238 (250)
                      |+..|...|.     ..+++++||+.+|||+.
T Consensus       163 Y~~sK~~~E~~~~~s~~~~~ilR~~~v~gp~~  194 (333)
T 2q1w_A          163 YAISKSANEDYLEYSGLDFVTFRLANVVGPRN  194 (333)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEESEEESTTC
T ss_pred             hHHHHHHHHHHHHhhhCCeEEEeeceEECcCC
Confidence            8877765554     22899999999999984

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.87  E-value=2.9e-21  Score=168.22  Aligned_cols=143  Identities=20%  Similarity=0.236  Sum_probs=115.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +||||    ||+||||++++++|+++  |++|++++|+.+...                +++++.+|   ++++.++++.
T Consensus         1 ~vlVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------------~~~~~~~D~~d~~~~~~~~~~   60 (317)
T 3ajr_A            1 MILVT----GSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------------GIKFITLDVSNRDEIDRAVEK   60 (317)
T ss_dssp             CEEEE----STTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------------TCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEE----cCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------------CceEEEecCCCHHHHHHHHhh
Confidence            58999    99999999999999999  899999998763321                23344554   7888888874


Q ss_pred             CcccEEEeCCCc---------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCC-CCCCccCCCCCCCCCChhHH
Q 025587          151 VTFDVVLDNNGK---------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       151 ~~~d~Vi~~ag~---------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~-~~~~~~e~~~~~~~~~~y~~  214 (250)
                      .++|+|||+|+.               |+.++.++++++++.++++||++||.++|+.. ...+..|+++..+. +.|+.
T Consensus        61 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~-~~Y~~  139 (317)
T 3ajr_A           61 YSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR-TMFGV  139 (317)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC-SHHHH
T ss_pred             cCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC-chHHH
Confidence            348999999983               56789999999999999999999999999975 33456777766665 78988


Q ss_pred             HHHHHHh---------CCcEEEEecCeeecCCCC
Q 025587          215 EKYISEN---------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       215 ~k~~~e~---------~~~~~ilRp~~i~G~~~~  239 (250)
                      +|...|.         +++++++||+.+||+...
T Consensus       140 sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~  173 (317)
T 3ajr_A          140 TKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAE  173 (317)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSC
T ss_pred             HHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCC
Confidence            8755543         799999999999997643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.87  E-value=2.6e-21  Score=171.43  Aligned_cols=151  Identities=20%  Similarity=0.171  Sum_probs=120.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-----CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      +|+||||    ||+||||++|+++|+++|     |+|++++|+.+... .           ...+++++.+|   .+++.
T Consensus         1 ~~~vlVt----GatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-----------~~~~~~~~~~Dl~d~~~~~   64 (364)
T 2v6g_A            1 SSVALIV----GVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-----------EDNPINYVQCDISDPDDSQ   64 (364)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-----------CSSCCEEEECCTTSHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-----------ccCceEEEEeecCCHHHHH
Confidence            3689999    999999999999999999     99999999875432 0           12356666666   77888


Q ss_pred             hhhcCCc-ccEEEeCCC-----------cCHHhHHHHHHHHHhC--CCCEEE-------EEcCcccccCC--CCCCccCC
Q 025587          146 NVVGGVT-FDVVLDNNG-----------KNLDAVRPVADWAKSS--GVKQFL-------FISSAGIYKPA--DEPPHVEG  202 (250)
Q Consensus       146 ~~l~~~~-~d~Vi~~ag-----------~~~~~~~~ll~~~~~~--~~~~~v-------~iSS~~vy~~~--~~~~~~e~  202 (250)
                      +++++.. +|+|||+|+           .|+.++.+++++|++.  ++++||       |+||.++|+..  ...+++|+
T Consensus        65 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~  144 (364)
T 2v6g_A           65 AKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTED  144 (364)
T ss_dssp             HHHTTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTT
T ss_pred             HHHhcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcc
Confidence            8888755 899999998           3688999999999997  899998       79999999975  34578888


Q ss_pred             CCCCCCCC-hhHHHHHHHH----hC-CcEEEEecCeeecCCCCC
Q 025587          203 DVVKPDAG-HVQVEKYISE----NF-SNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       203 ~~~~~~~~-~y~~~k~~~e----~~-~~~~ilRp~~i~G~~~~~  240 (250)
                      ++..+... .|..|+.+.+    .+ ++++++||+.+|||+...
T Consensus       145 ~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~  188 (364)
T 2v6g_A          145 LPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYS  188 (364)
T ss_dssp             SCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTC
T ss_pred             ccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCc
Confidence            77654223 3556776655    34 999999999999998753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.86  E-value=1e-21  Score=162.23  Aligned_cols=144  Identities=17%  Similarity=0.240  Sum_probs=100.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+++....+           . .+++++.+|   ++.  +.+.+ 
T Consensus         1 MkvlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------~-~~~~~~~~D~~d~~~--~~~~~-   61 (221)
T 3ew7_A            1 MKIGII----GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----------H-KDINILQKDIFDLTL--SDLSD-   61 (221)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-----------C-SSSEEEECCGGGCCH--HHHTT-
T ss_pred             CeEEEE----cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-----------c-CCCeEEeccccChhh--hhhcC-
Confidence            589999    9999999999999999999999999987554422           1 467788888   333  66666 


Q ss_pred             cccEEEeCCCc-------CHHhHHHHHHHHHhCCCCEEEEEcCcccccC-CCCCCccCCCCCCCC----CChhHHHHH--
Q 025587          152 TFDVVLDNNGK-------NLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHVEGDVVKPD----AGHVQVEKY--  217 (250)
Q Consensus       152 ~~d~Vi~~ag~-------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~-~~~~~~~e~~~~~~~----~~~y~~~k~--  217 (250)
                       +|+|||++|.       ++.++++++++|++.++++||++||.+.|.. ....+..|+.+..+.    ..+...|.+  
T Consensus        62 -~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~  140 (221)
T 3ew7_A           62 -QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEH  140 (221)
T ss_dssp             -CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHH
T ss_pred             -CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHH
Confidence             7999999984       6789999999999999999999999876544 333344454444332    123333332  


Q ss_pred             HH--HhCCcEEEEecCeeecCCC
Q 025587          218 IS--ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       218 ~~--e~~~~~~ilRp~~i~G~~~  238 (250)
                      +.  +.+++|+++||+.+||++.
T Consensus       141 ~~~~~~gi~~~ivrp~~v~g~~~  163 (221)
T 3ew7_A          141 LKSHQAEFSWTYISPSAMFEPGE  163 (221)
T ss_dssp             HHTTTTTSCEEEEECSSCCCCC-
T ss_pred             HHhhccCccEEEEeCcceecCCC
Confidence            44  5679999999999999843

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.86  E-value=4e-21  Score=161.44  Aligned_cols=149  Identities=19%  Similarity=0.240  Sum_probs=108.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    ||+|+||++++++|+++| ++|++++|+++....+.           ..+++++.+|   ++++.++
T Consensus        21 ~~mk~vlVt----GatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~   85 (236)
T 3qvo_A           21 GHMKNVLIL----GAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----------PTNSQIIMGDVLNHAALKQA   85 (236)
T ss_dssp             -CCEEEEEE----TTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----------CTTEEEEECCTTCHHHHHHH
T ss_pred             CcccEEEEE----eCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----------cCCcEEEEecCCCHHHHHHH
Confidence            346899999    999999999999999999 99999999886654322           2356666666   8889999


Q ss_pred             hcCCcccEEEeCCCcC--HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC--ccCCCCCCCCCChhH-HHHHHHHhC
Q 025587          148 VGGVTFDVVLDNNGKN--LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP--HVEGDVVKPDAGHVQ-VEKYISENF  222 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~--~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~--~~e~~~~~~~~~~y~-~~k~~~e~~  222 (250)
                      +++  +|+|||+++..  ...++++++++++.++++||++||.++|+.....+  ..+.....+. ..|. .++.+.+.+
T Consensus        86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g  162 (236)
T 3qvo_A           86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPL-KPFRRAADAIEASG  162 (236)
T ss_dssp             HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGG-HHHHHHHHHHHTSC
T ss_pred             hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchH-HHHHHHHHHHHHCC
Confidence            987  79999999842  34688999999999999999999999998754322  2232222222 3344 555667779


Q ss_pred             CcEEEEecCeeecCCC
Q 025587          223 SNWASFRPQYMIGSGN  238 (250)
Q Consensus       223 ~~~~ilRp~~i~G~~~  238 (250)
                      +++++||||.++++..
T Consensus       163 i~~~~vrPg~i~~~~~  178 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDI  178 (236)
T ss_dssp             SEEEEEEECEEECCSC
T ss_pred             CCEEEEeCCcccCCCC
Confidence            9999999999999854

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.86  E-value=8.5e-22  Score=165.17  Aligned_cols=142  Identities=23%  Similarity=0.351  Sum_probs=110.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCc-eEEeCCH-HHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDP-AEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D~-~~l~~~l~~  150 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.           +...++ +++.+|. +++.+++++
T Consensus        20 ~~~~ilVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-----------~~~~~~~~~~~~Dl~~~~~~~~~~   84 (236)
T 3e8x_A           20 QGMRVLVV----GANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-----------LRERGASDIVVANLEEDFSHAFAS   84 (236)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-----------HHHTTCSEEEECCTTSCCGGGGTT
T ss_pred             CCCeEEEE----CCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-----------HHhCCCceEEEcccHHHHHHHHcC
Confidence            46899999    999999999999999999999999998765442           233467 7888885 566666765


Q ss_pred             CcccEEEeCCC------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH--
Q 025587          151 VTFDVVLDNNG------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK--  216 (250)
Q Consensus       151 ~~~d~Vi~~ag------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k--  216 (250)
                        +|+|||+||            .|+.++.++++++++.++++||++||.+.+.+.       ..+  +....|+..|  
T Consensus        85 --~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~-------~~~--~~~~~Y~~sK~~  153 (236)
T 3e8x_A           85 --IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD-------QGP--MNMRHYLVAKRL  153 (236)
T ss_dssp             --CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG-------GSC--GGGHHHHHHHHH
T ss_pred             --CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC-------CCh--hhhhhHHHHHHH
Confidence              899999999            378899999999999999999999996654321       111  1125566555  


Q ss_pred             ---HHHHhCCcEEEEecCeeecCCCCC
Q 025587          217 ---YISENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       217 ---~~~e~~~~~~ilRp~~i~G~~~~~  240 (250)
                         ++.+.+++++++||+.+||+....
T Consensus       154 ~e~~~~~~gi~~~~lrpg~v~~~~~~~  180 (236)
T 3e8x_A          154 ADDELKRSSLDYTIVRPGPLSNEESTG  180 (236)
T ss_dssp             HHHHHHHSSSEEEEEEECSEECSCCCS
T ss_pred             HHHHHHHCCCCEEEEeCCcccCCCCCC
Confidence               445558999999999999997543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=2.6e-21  Score=170.22  Aligned_cols=159  Identities=19%  Similarity=0.208  Sum_probs=113.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++++||||    ||+||||++|+++|+++||+|++++|+.+...+....  ..+.. ...+++++.+|   .+++.++++
T Consensus         4 ~~~~vlVT----GatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   76 (337)
T 2c29_D            4 QSETVCVT----GASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL--LDLPK-AETHLTLWKADLADEGSFDEAIK   76 (337)
T ss_dssp             --CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHH--HTSTT-HHHHEEEEECCTTSTTTTHHHHT
T ss_pred             CCCEEEEE----CCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHH--Hhccc-CCCeEEEEEcCCCCHHHHHHHHc
Confidence            46899999    9999999999999999999999999987532211000  00000 01245666666   677888887


Q ss_pred             CCcccEEEeCCC---------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcc-cccCCC-CCCccCCCCCC-----
Q 025587          150 GVTFDVVLDNNG---------------KNLDAVRPVADWAKSSG-VKQFLFISSAG-IYKPAD-EPPHVEGDVVK-----  206 (250)
Q Consensus       150 ~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~-vy~~~~-~~~~~e~~~~~-----  206 (250)
                      +  +|+|||+|+               .|+.++.+++++|++.+ +++||++||.+ +|+... ..+++|+++..     
T Consensus        77 ~--~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~  154 (337)
T 2c29_D           77 G--CTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCR  154 (337)
T ss_dssp             T--CSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHH
T ss_pred             C--CCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhc
Confidence            6  799999997               25778999999999877 89999999987 454422 23456654221     


Q ss_pred             ---CCCChhHHHHHHHH---------hCCcEEEEecCeeecCCCCC
Q 025587          207 ---PDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       207 ---~~~~~y~~~k~~~e---------~~~~~~ilRp~~i~G~~~~~  240 (250)
                         +..+.|+.+|.+.|         .+++++++||+.+|||+...
T Consensus       155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~  200 (337)
T 2c29_D          155 AKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMS  200 (337)
T ss_dssp             HHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCS
T ss_pred             ccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCC
Confidence               12246888876544         37999999999999998654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=1.6e-21  Score=180.26  Aligned_cols=161  Identities=20%  Similarity=0.328  Sum_probs=122.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhC---CCeEEEEEcCCCccccCCC--CCCC--------cccchhcCCceEEe
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGDENSDKMKK--PPFN--------RFNEIVSAGGKTVW  138 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~---G~~V~~l~R~~~~~~~~~~--~~~~--------~~~~~~~~~v~~v~  138 (250)
                      ..+|+||||    ||+||||++|+++|+++   |++|++++|+.+.......  ..+.        .+......+++++.
T Consensus        71 ~~~~~VLVT----GatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           71 PELRTVLLT----GATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             SCCCEEEEE----CTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            457899999    99999999999999999   9999999998753221100  0000        01111235677887


Q ss_pred             CCH---------HHHHhhhcCCcccEEEeCCCc------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCC
Q 025587          139 GDP---------AEVGNVVGGVTFDVVLDNNGK------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       139 ~D~---------~~l~~~l~~~~~d~Vi~~ag~------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +|.         +.+.+++++  +|+|||+|+.            |+.++.+++++|++.++++|||+||.++|+.....
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~  224 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAET--VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPS  224 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHH--CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTT
T ss_pred             eECCCcccCCCHHHHHHHHcC--CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCC
Confidence            773         467777775  8999999983            78899999999999999999999999999987777


Q ss_pred             CccCCCCCCCC----------CChhHHHHHHHH---------hCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPD----------AGHVQVEKYISE---------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~----------~~~y~~~k~~~e---------~~~~~~ilRp~~i~G~~~  238 (250)
                      ++.|+++..+.          ...|+.+|...|         .+++++++||+.|||+..
T Consensus       225 ~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~  284 (478)
T 4dqv_A          225 AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTS  284 (478)
T ss_dssp             TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSS
T ss_pred             CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCc
Confidence            78887654321          133887776655         379999999999999865

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.86  E-value=9.2e-21  Score=167.19  Aligned_cols=152  Identities=20%  Similarity=0.241  Sum_probs=113.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|+||||    ||+||||++|+++|+++|++|++++|..+......    ..+  ....+++++.+|..+  ..+.+  
T Consensus        26 ~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~--~~~~~~~~~~~D~~~--~~~~~--   91 (343)
T 2b69_A           26 DRKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHW--IGHENFELINHDVVE--PLYIE--   91 (343)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT----GGG--TTCTTEEEEECCTTS--CCCCC--
T ss_pred             CCCEEEEE----cCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhh----hhh--ccCCceEEEeCccCC--hhhcC--
Confidence            46899999    99999999999999999999999999754322100    000  112356777777322  23444  


Q ss_pred             ccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC-----CCCCCCCh
Q 025587          153 FDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGH  211 (250)
Q Consensus       153 ~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~-----~~~~~~~~  211 (250)
                      +|+|||+|+.                |+.++.+++++|++.++ +||++||.++|+.....+++|..     +..+. ..
T Consensus        92 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~-~~  169 (343)
T 2b69_A           92 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR-AC  169 (343)
T ss_dssp             CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT-HH
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCC-Cc
Confidence            8999999982                56789999999999886 99999999999987666777763     44443 67


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |+.+|...|.         +++++++||+.+|||+...
T Consensus       170 Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~  207 (343)
T 2b69_A          170 YDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM  207 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCT
T ss_pred             hHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCC
Confidence            8877754443         7999999999999998643

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.85  E-value=1e-21  Score=172.36  Aligned_cols=157  Identities=18%  Similarity=0.123  Sum_probs=115.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+||||++++++|+++||+|++++|+.+..+.+.+.    +......+++++ .+|   .+.+.+++
T Consensus        10 ~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A           10 EGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR----WDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHH----hhccCCCceEEEEecCCcChHHHHHHH
Confidence            45799999    9999999999999999999999999976443221100    000001345655 566   66677777


Q ss_pred             cCCcccEEEeCCCc-------------CHHhHHHHHHHHHh-CCCCEEEEEcCcccccCCC----CCCccCCCC------
Q 025587          149 GGVTFDVVLDNNGK-------------NLDAVRPVADWAKS-SGVKQFLFISSAGIYKPAD----EPPHVEGDV------  204 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~-------------~~~~~~~ll~~~~~-~~~~~~v~iSS~~vy~~~~----~~~~~e~~~------  204 (250)
                      ++  +|+|||+|+.             |+.++.+++++|++ .++++||++||.++|+...    +.+++|++.      
T Consensus        82 ~~--~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  159 (342)
T 1y1p_A           82 KG--AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TT--CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             cC--CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence            65  8999999982             57899999999985 6789999999999986432    146777652      


Q ss_pred             ----------CCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCCC
Q 025587          205 ----------VKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       205 ----------~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~~  240 (250)
                                ..+ .+.|+.+|...|.           +++++++||+.+||++...
T Consensus       160 ~~~~~~~~~~~~~-~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~  215 (342)
T 1y1p_A          160 KAKTLPESDPQKS-LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP  215 (342)
T ss_dssp             HHHHSCTTSTTHH-HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCT
T ss_pred             hhccccccccccc-hHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCC
Confidence                      122 2568888765544           5789999999999998654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.85  E-value=6.4e-21  Score=166.23  Aligned_cols=156  Identities=21%  Similarity=0.260  Sum_probs=110.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      +|+||||    ||+||||++++++|+++||+|++++| +.+......     .+.++.  ..+++++.+|   ++++.++
T Consensus         1 ~k~vlVT----GatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   71 (322)
T 2p4h_X            1 KGRVCVT----GGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-----FLTNLPGASEKLHFFNADLSNPDSFAAA   71 (322)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-----HHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred             CCEEEEE----CChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-----HHHhhhccCCceEEEecCCCCHHHHHHH
Confidence            4789999    99999999999999999999999998 543211100     000000  1134455555   7888888


Q ss_pred             hcCCcccEEEeCCC---------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccc-cCC-CCCCccCCCCC----
Q 025587          148 VGGVTFDVVLDNNG---------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIY-KPA-DEPPHVEGDVV----  205 (250)
Q Consensus       148 l~~~~~d~Vi~~ag---------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy-~~~-~~~~~~e~~~~----  205 (250)
                      +++  +|+|||+|+               .|+.++.+++++|++. ++++||++||..++ +.. ...+++|+++.    
T Consensus        72 ~~~--~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~  149 (322)
T 2p4h_X           72 IEG--CVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDL  149 (322)
T ss_dssp             HTT--CSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HcC--CCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhh
Confidence            887  799999986               2567899999999997 78999999998744 332 22345665432    


Q ss_pred             ----CCCCChhHHHHHHHH---------hCCcEEEEecCeeecCCCCC
Q 025587          206 ----KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ----~~~~~~y~~~k~~~e---------~~~~~~ilRp~~i~G~~~~~  240 (250)
                          .+....|+.+|.+.|         .+++++++||+.+|||+...
T Consensus       150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~  197 (322)
T 2p4h_X          150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCP  197 (322)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSS
T ss_pred             hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCC
Confidence                122125888876554         37999999999999998653

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.85  E-value=1e-20  Score=166.50  Aligned_cols=149  Identities=21%  Similarity=0.247  Sum_probs=119.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-------CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-------HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~  142 (250)
                      ++|+||||    ||+||||++++++|+++|       ++|++++|..+....           ....+++++.+|   ++
T Consensus        13 ~~~~vlVt----Ga~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----------~~~~~~~~~~~Dl~d~~   77 (342)
T 2hrz_A           13 QGMHIAII----GAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----------GFSGAVDARAADLSAPG   77 (342)
T ss_dssp             SCEEEEEE----TTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----------TCCSEEEEEECCTTSTT
T ss_pred             cCCEEEEE----CCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----------ccCCceeEEEcCCCCHH
Confidence            35799999    999999999999999999       899999998643321           012245566666   67


Q ss_pred             HHHhhhcCCcccEEEeCCCc---------------CHHhHHHHHHHHHhCC-----CCEEEEEcCcccccCCCCCCccCC
Q 025587          143 EVGNVVGGVTFDVVLDNNGK---------------NLDAVRPVADWAKSSG-----VKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag~---------------~~~~~~~ll~~~~~~~-----~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      .+.+++++ .+|+|||+|+.               |+.++.+++++|++.+     +++||++||..+|+.....+++|+
T Consensus        78 ~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~  156 (342)
T 2hrz_A           78 EAEKLVEA-RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE  156 (342)
T ss_dssp             HHHHHHHT-CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred             HHHHHHhc-CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence            78888852 38999999982               5678999999999876     899999999999998655688999


Q ss_pred             CCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeec-CCC
Q 025587          203 DVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIG-SGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G-~~~  238 (250)
                      ++..+. ..|+.+|...|.         +++++++|+..+|| |+.
T Consensus       157 ~~~~~~-~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~  201 (342)
T 2hrz_A          157 FHTTPL-TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGK  201 (342)
T ss_dssp             CCCCCS-SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSS
T ss_pred             CCCCCc-chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCC
Confidence            887765 789888866554         47899999999998 654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.85  E-value=7.5e-21  Score=157.88  Aligned_cols=146  Identities=14%  Similarity=0.095  Sum_probs=110.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH-hCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      |+|+||||    ||+|+||++++++|+ ++|++|++++|+++ ..+.+.         ....+++++.+|   ++++.++
T Consensus         4 mmk~vlVt----Gasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~   70 (221)
T 3r6d_A            4 MYXYITIL----GAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---------IDHERVTVIEGSFQNPGXLEQA   70 (221)
T ss_dssp             SCSEEEEE----STTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---------HTSTTEEEEECCTTCHHHHHHH
T ss_pred             eEEEEEEE----eCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---------cCCCceEEEECCCCCHHHHHHH
Confidence            45679999    999999999999999 89999999999876 544321         023356666666   7888999


Q ss_pred             hcCCcccEEEeCCCc-CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCC-hhHH-----HHHHHH
Q 025587          148 VGGVTFDVVLDNNGK-NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG-HVQV-----EKYISE  220 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~-~y~~-----~k~~~e  220 (250)
                      +++  +|+|||++|. |+. ++++++++++.++++||++||.++|+........+....   .. .|..     ++++.+
T Consensus        71 ~~~--~d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~---~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A           71 VTN--AEVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDN---LPISYVQGERQARNVLRE  144 (221)
T ss_dssp             HTT--CSEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHT---SCHHHHHHHHHHHHHHHH
T ss_pred             HcC--CCEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccc---cccHHHHHHHHHHHHHHh
Confidence            986  7999999996 677 999999999999999999999998875322100000000   01 4554     445566


Q ss_pred             hCCcEEEEecCeeecCC
Q 025587          221 NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       221 ~~~~~~ilRp~~i~G~~  237 (250)
                      .+++|++||||.++++.
T Consensus       145 ~~i~~~~vrpg~v~~~~  161 (221)
T 3r6d_A          145 SNLNYTILRLTWLYNDP  161 (221)
T ss_dssp             SCSEEEEEEECEEECCT
T ss_pred             CCCCEEEEechhhcCCC
Confidence            68999999999999983

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.85  E-value=2.2e-20  Score=152.39  Aligned_cols=135  Identities=21%  Similarity=0.250  Sum_probs=108.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+++.....           ...+++++.+|   ++++.+++++ 
T Consensus         4 ~~ilVt----GatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~-   67 (206)
T 1hdo_A            4 KKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVAG-   67 (206)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHTT-
T ss_pred             CEEEEE----cCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------cCCceEEEEecCCCHHHHHHHHcC-
Confidence            789999    9999999999999999999999999987554321           12356677776   7888888887 


Q ss_pred             cccEEEeCCCc---------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH-----H
Q 025587          152 TFDVVLDNNGK---------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK-----Y  217 (250)
Q Consensus       152 ~~d~Vi~~ag~---------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k-----~  217 (250)
                       +|+|||+++.         |+.++.++++++++.++++||++||.++|+.....+.       + ...|+.+|     +
T Consensus        68 -~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------~-~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           68 -QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-------R-LQAVTDDHIRMHKV  138 (206)
T ss_dssp             -CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-------G-GHHHHHHHHHHHHH
T ss_pred             -CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-------c-chhHHHHHHHHHHH
Confidence             7999999983         5678999999999999999999999999986543221       1 24566555     4


Q ss_pred             HHHhCCcEEEEecCeee
Q 025587          218 ISENFSNWASFRPQYMI  234 (250)
Q Consensus       218 ~~e~~~~~~ilRp~~i~  234 (250)
                      +.+.+++++++||+.++
T Consensus       139 ~~~~~i~~~~lrp~~~~  155 (206)
T 1hdo_A          139 LRESGLKYVAVMPPHIG  155 (206)
T ss_dssp             HHHTCSEEEEECCSEEE
T ss_pred             HHhCCCCEEEEeCCccc
Confidence            45558999999999973

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.85  E-value=1.2e-20  Score=158.27  Aligned_cols=137  Identities=26%  Similarity=0.256  Sum_probs=108.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|+  +|++++|+++..+..           ...++.++.+|   ++++.++
T Consensus        17 ~~~~vlVt----Gasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~   81 (242)
T 2bka_A           17 QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------AYKNVNQEVVDFEKLDDYASA   81 (242)
T ss_dssp             TCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------GGGGCEEEECCGGGGGGGGGG
T ss_pred             cCCeEEEE----CCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-----------ccCCceEEecCcCCHHHHHHH
Confidence            35799999    9999999999999999999  999999987654321           11246667777   6777788


Q ss_pred             hcCCcccEEEeCCCc-------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          148 VGGVTFDVVLDNNGK-------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~-------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                      +++  +|+|||++|.             |+.++.++++++++.++++||++||.++|+..              ...|+.
T Consensus        82 ~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--------------~~~Y~~  145 (242)
T 2bka_A           82 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS--------------NFLYLQ  145 (242)
T ss_dssp             GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------SSHHHH
T ss_pred             hcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC--------------cchHHH
Confidence            875  8999999994             56789999999999999999999999988631              144666


Q ss_pred             HHHHH-----HhCC-cEEEEecCeeecCCCCC
Q 025587          215 EKYIS-----ENFS-NWASFRPQYMIGSGNNK  240 (250)
Q Consensus       215 ~k~~~-----e~~~-~~~ilRp~~i~G~~~~~  240 (250)
                      .|...     +.++ +++++|||.+||++...
T Consensus       146 sK~~~e~~~~~~~~~~~~~vrpg~v~~~~~~~  177 (242)
T 2bka_A          146 VKGEVEAKVEELKFDRYSVFRPGVLLCDRQES  177 (242)
T ss_dssp             HHHHHHHHHHTTCCSEEEEEECCEEECTTGGG
T ss_pred             HHHHHHHHHHhcCCCCeEEEcCceecCCCCCC
Confidence            66444     4468 59999999999997543

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.84  E-value=2.4e-20  Score=161.59  Aligned_cols=136  Identities=19%  Similarity=0.231  Sum_probs=104.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      ||||||    |||||||++|+++|+++||+|++++|+++..+                    +..| +...+.+++  +|
T Consensus         1 MkILVT----GatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~--------------------~~~~-~~~~~~l~~--~d   53 (298)
T 4b4o_A            1 MRVLVG----GGTGFIGTALTQLLNARGHEVTLVSRKPGPGR--------------------ITWD-ELAASGLPS--CD   53 (298)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE--------------------EEHH-HHHHHCCCS--CS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe--------------------eecc-hhhHhhccC--CC
Confidence            689999    99999999999999999999999999763211                    1112 122334455  79


Q ss_pred             EEEeCCC--------------------cCHHhHHHHHHHHHhCCC--CEEEEEcCcccccCCCCCCccCCCCCCCCCChh
Q 025587          155 VVLDNNG--------------------KNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHV  212 (250)
Q Consensus       155 ~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~--~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y  212 (250)
                      +|||+++                    .++.++.++++++++.+.  ++||+.||.++|++....+.+|+++..+. ..|
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~-~~~  132 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF-DFF  132 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS-SHH
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc-chh
Confidence            9999997                    146789999999988664  45899999999999888889999887765 555


Q ss_pred             HHHHHHHH-------hCCcEEEEecCeeecCCC
Q 025587          213 QVEKYISE-------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       213 ~~~k~~~e-------~~~~~~ilRp~~i~G~~~  238 (250)
                      +..+...|       .+++++++||+.||||+.
T Consensus       133 ~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~  165 (298)
T 4b4o_A          133 SNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG  165 (298)
T ss_dssp             HHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS
T ss_pred             HHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC
Confidence            53332222       268999999999999974

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.84  E-value=4.8e-20  Score=176.61  Aligned_cols=150  Identities=21%  Similarity=0.250  Sum_probs=118.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHH-HHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAE-VGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~-l~~~  147 (250)
                      ++|+||||    ||+||||++++++|+++ ||+|++++|+.+....+.          ...+++++.+|   .++ +.++
T Consensus       314 ~~~~VLVT----GatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----------~~~~v~~v~~Dl~d~~~~~~~~  379 (660)
T 1z7e_A          314 RRTRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYH  379 (660)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----------TCTTEEEEECCTTTCHHHHHHH
T ss_pred             cCceEEEE----cCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----------cCCceEEEECCCCCcHHHHHHh
Confidence            46799999    99999999999999998 899999999875543221          12356777777   333 6667


Q ss_pred             hcCCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC------
Q 025587          148 VGGVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------  205 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~------  205 (250)
                      +++  +|+|||+|+.                |+.++.+++++|++.+ ++||++||.++|+.....+++|+++.      
T Consensus       380 ~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~  456 (660)
T 1z7e_A          380 VKK--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  456 (660)
T ss_dssp             HHH--CSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCT
T ss_pred             hcC--CCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcc
Confidence            765  8999999982                4678999999999988 89999999999998776678887642      


Q ss_pred             CCCCChhHHHHHHHH---------hCCcEEEEecCeeecCCCC
Q 025587          206 KPDAGHVQVEKYISE---------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e---------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ....+.|+.+|...|         .+++++++||+.+||++..
T Consensus       457 ~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          457 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             TCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSS
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCcc
Confidence            112256887775544         3799999999999999864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.83  E-value=1.7e-20  Score=161.12  Aligned_cols=136  Identities=16%  Similarity=0.195  Sum_probs=108.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+||||    ||+||||++++++|+++  ||+|++++|+.+....           +...+++++.+|   ++++.++++
T Consensus         1 ~~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----------l~~~~~~~~~~D~~d~~~l~~~~~   65 (287)
T 2jl1_A            1 FSIAVT----GATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-----------LADQGVEVRHGDYNQPESLQKAFA   65 (287)
T ss_dssp             CCEEET----TTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-----------HHHTTCEEEECCTTCHHHHHHHTT
T ss_pred             CeEEEE----cCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-----------HhhcCCeEEEeccCCHHHHHHHHh
Confidence            579999    99999999999999999  9999999998754332           223456677776   788889888


Q ss_pred             CCcccEEEeCCCc------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCC
Q 025587          150 GVTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFS  223 (250)
Q Consensus       150 ~~~~d~Vi~~ag~------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~  223 (250)
                      +  +|+|||+++.      |+.++.+++++|++.++++||++||.++|...          .....++...|+++.+.++
T Consensus        66 ~--~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~----------~~y~~~K~~~E~~~~~~~~  133 (287)
T 2jl1_A           66 G--VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI----------IPLAHVHLATEYAIRTTNI  133 (287)
T ss_dssp             T--CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC----------STHHHHHHHHHHHHHHTTC
T ss_pred             c--CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC----------CchHHHHHHHHHHHHHcCC
Confidence            7  7999999985      78899999999999999999999999887321          1111244556666666789


Q ss_pred             cEEEEecCeeecCC
Q 025587          224 NWASFRPQYMIGSG  237 (250)
Q Consensus       224 ~~~ilRp~~i~G~~  237 (250)
                      +++++||+.++|+.
T Consensus       134 ~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          134 PYTFLRNALYTDFF  147 (287)
T ss_dssp             CEEEEEECCBHHHH
T ss_pred             CeEEEECCEecccc
Confidence            99999999988864

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=3.5e-20  Score=178.48  Aligned_cols=156  Identities=22%  Similarity=0.221  Sum_probs=119.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+||||++|+++|+++|++|++++|..+......    ..+..+...+++++.+|   ++.+.++++
T Consensus        10 ~~~~ilVT----GatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~   81 (699)
T 1z45_A           10 TSKIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV----ARLEVLTKHHIPFYEVDLCDRKGLEKVFK   81 (699)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH----HHHHHHHTSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHH----HHHhhccCCceEEEEcCCCCHHHHHHHHH
Confidence            46899999    99999999999999999999999999764321100    00111123456667776   778888887


Q ss_pred             CCcccEEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC----CCCccCCCCCCCCC
Q 025587          150 GVTFDVVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPDA  209 (250)
Q Consensus       150 ~~~~d~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~----~~~~~e~~~~~~~~  209 (250)
                      ..++|+|||+|+.                |+.++.+++++|++.++++||++||.++|+...    ..+++|.++..+. 
T Consensus        82 ~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~-  160 (699)
T 1z45_A           82 EYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-  160 (699)
T ss_dssp             HSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-
T ss_pred             hCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC-
Confidence            4358999999982                567899999999998999999999999998642    2467787776664 


Q ss_pred             ChhHHHHHHHH-----------hCCcEEEEecCeeecCC
Q 025587          210 GHVQVEKYISE-----------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       210 ~~y~~~k~~~e-----------~~~~~~ilRp~~i~G~~  237 (250)
                      ..|+.+|...|           .+++++++||+.+||++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          161 NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred             ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCC
Confidence            67887775443           36899999999999986

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=6.8e-20  Score=150.75  Aligned_cols=133  Identities=20%  Similarity=0.194  Sum_probs=104.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      |+|+||||    ||+|+||++++++|+++|+  +|++++|+++. .              ..+++++.+|..+.+.+.+-
T Consensus         4 ~~~~vlVt----GatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~--------------~~~~~~~~~D~~~~~~~~~~   64 (215)
T 2a35_A            4 TPKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALA-E--------------HPRLDNPVGPLAELLPQLDG   64 (215)
T ss_dssp             CCCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C--------------CTTEECCBSCHHHHGGGCCS
T ss_pred             CCceEEEE----CCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c--------------CCCceEEeccccCHHHHHHh
Confidence            56899999    9999999999999999998  99999998754 1              12455666774443333222


Q ss_pred             CcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH
Q 025587          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK  216 (250)
Q Consensus       151 ~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k  216 (250)
                      . +|+|||++|.              |+.++.++++++++.++++||++||.++|+..              ...|+..|
T Consensus        65 ~-~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~--------------~~~y~~sK  129 (215)
T 2a35_A           65 S-IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS--------------SIFYNRVK  129 (215)
T ss_dssp             C-CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC--------------SSHHHHHH
T ss_pred             h-hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCC--------------ccHHHHHH
Confidence            2 8999999983              46789999999999999999999999988631              14566666


Q ss_pred             HHHH-----hCCc-EEEEecCeeecCCCC
Q 025587          217 YISE-----NFSN-WASFRPQYMIGSGNN  239 (250)
Q Consensus       217 ~~~e-----~~~~-~~ilRp~~i~G~~~~  239 (250)
                      ...|     .+++ ++++||+.+||+...
T Consensus       130 ~~~e~~~~~~~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          130 GELEQALQEQGWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             HHHHHHHTTSCCSEEEEEECCSEESTTSC
T ss_pred             HHHHHHHHHcCCCeEEEEeCceeeCCCCc
Confidence            5444     4789 999999999999765

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.83  E-value=3.1e-20  Score=164.73  Aligned_cols=138  Identities=16%  Similarity=0.299  Sum_probs=108.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++ |+ +|++++|++++...+.+       .+...+++++.+|   .+.+.++
T Consensus        20 ~~k~vlVT----GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~   88 (344)
T 2gn4_A           20 DNQTILIT----GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM-------EFNDPRMRFFIGDVRDLERLNYA   88 (344)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH-------HHCCTTEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH-------HhcCCCEEEEECCCCCHHHHHHH
Confidence            35899999    99999999999999999 97 99999998654332210       1112356677776   7888888


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      +++  +|+|||+||                .|+.++.++++++++.++++||++||...+.+               ...
T Consensus        89 ~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p---------------~~~  151 (344)
T 2gn4_A           89 LEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP---------------INL  151 (344)
T ss_dssp             TTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC---------------CSH
T ss_pred             Hhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC---------------ccH
Confidence            886  899999998                36788999999999999999999999776532               155


Q ss_pred             hHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          212 VQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       212 y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                      |+.+|...|.            +++++++|||++||++.
T Consensus       152 Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~  190 (344)
T 2gn4_A          152 YGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG  190 (344)
T ss_dssp             HHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC
Confidence            7777655443            48999999999999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.83  E-value=9.6e-20  Score=156.83  Aligned_cols=137  Identities=14%  Similarity=0.115  Sum_probs=108.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+|+||++++++|+++ |++|++++|+++....           +...+++++.+|   ++++.+++++
T Consensus         1 M~ilVt----GatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----------~~~~~v~~~~~D~~d~~~l~~~~~~   65 (289)
T 3e48_A            1 MNIMLT----GATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----------DWRGKVSVRQLDYFNQESMVEAFKG   65 (289)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----------GGBTTBEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEEE----cCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----------hhhCCCEEEEcCCCCHHHHHHHHhC
Confidence            579999    99999999999999998 9999999998865443           233467777776   7889999987


Q ss_pred             CcccEEEeCCCc------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCc
Q 025587          151 VTFDVVLDNNGK------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (250)
Q Consensus       151 ~~~d~Vi~~ag~------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~  224 (250)
                        +|+|||+++.      ++.++++++++|++.|+++||++||.+.   ....++      .........++.+.+.+++
T Consensus        66 --~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~~~~------~~~~~~~~~e~~~~~~g~~  134 (289)
T 3e48_A           66 --MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHNNPF------HMSPYFGYASRLLSTSGID  134 (289)
T ss_dssp             --CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STTCCS------TTHHHHHHHHHHHHHHCCE
T ss_pred             --CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCCCCC------ccchhHHHHHHHHHHcCCC
Confidence              7999999994      5788999999999999999999999542   211111      1111122466777888999


Q ss_pred             EEEEecCeeecCC
Q 025587          225 WASFRPQYMIGSG  237 (250)
Q Consensus       225 ~~ilRp~~i~G~~  237 (250)
                      |+++||+.+||+.
T Consensus       135 ~~ilrp~~~~~~~  147 (289)
T 3e48_A          135 YTYVRMAMYMDPL  147 (289)
T ss_dssp             EEEEEECEESTTH
T ss_pred             EEEEecccccccc
Confidence            9999999999973

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.82  E-value=3.4e-20  Score=172.99  Aligned_cols=138  Identities=20%  Similarity=0.234  Sum_probs=107.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~~~~  152 (250)
                      +|+||||    ||+||||++|+++|+++||+|++++|+.+..+.                   +.+| .+.+.+++.+  
T Consensus       147 ~m~VLVT----GatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-------------------v~~d~~~~~~~~l~~--  201 (516)
T 3oh8_A          147 PLTVAIT----GSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-------------------RFWDPLNPASDLLDG--  201 (516)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-------------------EECCTTSCCTTTTTT--
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-------------------eeecccchhHHhcCC--
Confidence            6799999    999999999999999999999999998754321                   1222 1223444554  


Q ss_pred             ccEEEeCCCc-----------------CHHhHHHHHHH-HHhCCCCEEEEEcCccccc-CCCCCCccCCCCCCCCCChhH
Q 025587          153 FDVVLDNNGK-----------------NLDAVRPVADW-AKSSGVKQFLFISSAGIYK-PADEPPHVEGDVVKPDAGHVQ  213 (250)
Q Consensus       153 ~d~Vi~~ag~-----------------~~~~~~~ll~~-~~~~~~~~~v~iSS~~vy~-~~~~~~~~e~~~~~~~~~~y~  213 (250)
                      +|+|||+|+.                 |+.++.+++++ +++.++++||++||.++|+ .....+++|+++. +. ..|+
T Consensus       202 ~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~-~~y~  279 (516)
T 3oh8_A          202 ADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GD-DFLA  279 (516)
T ss_dssp             CSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CS-SHHH
T ss_pred             CCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-Cc-ChHH
Confidence            8999999982                 67889999999 6778899999999999999 4445577887776 32 5666


Q ss_pred             HHHHH--------HHhCCcEEEEecCeeecCCC
Q 025587          214 VEKYI--------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       214 ~~k~~--------~e~~~~~~ilRp~~i~G~~~  238 (250)
                      ..|..        .+.+++++++||+.+||++.
T Consensus       280 ~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~  312 (516)
T 3oh8_A          280 EVCRDWEHATAPASDAGKRVAFIRTGVALSGRG  312 (516)
T ss_dssp             HHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC
Confidence            44433        23479999999999999974

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.82  E-value=5.1e-20  Score=154.68  Aligned_cols=147  Identities=16%  Similarity=0.215  Sum_probs=108.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++  |++|++++|+++..+.+            ..+++++.+|   ++++.++
T Consensus         3 ~~~~ilVt----GasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~D~~d~~~~~~~   66 (253)
T 1xq6_A            3 NLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPA   66 (253)
T ss_dssp             SCCEEEEE----STTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------CCCeeEEEecCCCHHHHHHH
Confidence            46899999    99999999999999999  89999999986544322            1234555555   7889999


Q ss_pred             hcCCcccEEEeCCCc-----------------------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGVTFDVVLDNNGK-----------------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~-----------------------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +++  +|+|||++|.                             |+.++.++++++++.++++||++||.+++....  +
T Consensus        67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~--~  142 (253)
T 1xq6_A           67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--P  142 (253)
T ss_dssp             HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--G
T ss_pred             HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC--c
Confidence            986  8999999973                             346799999999999999999999988763211  1


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHhCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...-.......++...|+++.+.+++++++||+.+||+...
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSS
T ss_pred             cccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcc
Confidence            11000000001344455555566899999999999999753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.82  E-value=8.1e-20  Score=166.12  Aligned_cols=158  Identities=18%  Similarity=0.251  Sum_probs=117.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc---CCCCCCCc-----ccchhcCCceEEeCCH--
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK---MKKPPFNR-----FNEIVSAGGKTVWGDP--  141 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~---~~~~~~~~-----~~~~~~~~v~~v~~D~--  141 (250)
                      ..+|+||||    ||+|+||++|+++|+++|++|++++|+.+..+.   +.+. ...     +.+....++.++.+|.  
T Consensus        67 ~~~~~vlVT----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~-l~~~~~~~~~~~~~~~v~~v~~Dl~d  141 (427)
T 4f6c_A           67 RPLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTN-LNDYFSEETVEMMLSNIEVIVGDFEC  141 (427)
T ss_dssp             CCCEEEEEE----CTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHH-HHHHSCHHHHHHHHTTEEEEEECC--
T ss_pred             CCCCEEEEe----cCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHH-HHHhccccccccccCceEEEeCCCCC
Confidence            346799999    999999999999999999999999998862211   1000 000     0111235677888883  


Q ss_pred             -HHHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccC-----CCCCCccCC
Q 025587          142 -AEVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-----ADEPPHVEG  202 (250)
Q Consensus       142 -~~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~-----~~~~~~~e~  202 (250)
                       +.+. .+.  ++|+|||+|+             .|+.++.+++++|++ ++++||++||.++ |.     ....+++|+
T Consensus       142 ~~~l~-~~~--~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~  216 (427)
T 4f6c_A          142 MDDVV-LPE--NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEA  216 (427)
T ss_dssp             -CCCC-CSS--CCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTT
T ss_pred             cccCC-CcC--CCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccc
Confidence             4444 333  4899999998             378899999999999 8899999999998 43     234567887


Q ss_pred             CCC---CCCCChhHHHHHHHH--------hCCcEEEEecCeeecCCCCC
Q 025587          203 DVV---KPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       203 ~~~---~~~~~~y~~~k~~~e--------~~~~~~ilRp~~i~G~~~~~  240 (250)
                      ++.   .+ ...|+.+|+..|        .+++++++||+.|||+....
T Consensus       217 ~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          217 DVYKGQLL-TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             CSCSSCCC-CSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSC
T ss_pred             ccccCCCC-CCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCC
Confidence            763   33 377888776655        47999999999999998764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.81  E-value=8.9e-20  Score=157.91  Aligned_cols=144  Identities=21%  Similarity=0.238  Sum_probs=110.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+|+||++++++|+++| ++|++++|+++....         ..+...+++++.+|   ++++.++++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~---------~~l~~~~~~~~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVF----GGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA---------KELRLQGAEVVQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH---------HHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEE----CCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH---------HHHHHCCCEEEEecCCCHHHHHHHHh
Confidence            5799999    999999999999999999 999999998754310         11223466777776   788999998


Q ss_pred             CCcccEEEeCCCc--------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh
Q 025587          150 GVTFDVVLDNNGK--------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (250)
Q Consensus       150 ~~~~d~Vi~~ag~--------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~  221 (250)
                      +  +|+|||+++.        ++.++++++++|++.|+++||++|+.++|+.....+     ......++..+|+++.+.
T Consensus        72 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~-----~~~y~~sK~~~e~~~~~~  144 (299)
T 2wm3_A           72 G--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRL-----AAAHFDGKGEVEEYFRDI  144 (299)
T ss_dssp             T--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSC-----CCHHHHHHHHHHHHHHHH
T ss_pred             c--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcc-----cCchhhHHHHHHHHHHHC
Confidence            7  7999999983        356899999999999999999999988886432210     000012344566677777


Q ss_pred             CCcEEEEecCeeecCC
Q 025587          222 FSNWASFRPQYMIGSG  237 (250)
Q Consensus       222 ~~~~~ilRp~~i~G~~  237 (250)
                      +++++++||+.+||+.
T Consensus       145 gi~~~ilrp~~~~~~~  160 (299)
T 2wm3_A          145 GVPMTSVRLPCYFENL  160 (299)
T ss_dssp             TCCEEEEECCEEGGGG
T ss_pred             CCCEEEEeecHHhhhc
Confidence            9999999999999974

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.81  E-value=1.5e-19  Score=153.96  Aligned_cols=137  Identities=21%  Similarity=0.239  Sum_probs=112.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |+||||    ||+|+||++++++|++ |++|++++|+++..     .           ++..+..|++++.+++++.++|
T Consensus         1 m~ilVt----GatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----~-----------~~~~Dl~~~~~~~~~~~~~~~d   59 (273)
T 2ggs_A            1 MRTLIT----GASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----G-----------GYKLDLTDFPRLEDFIIKKRPD   59 (273)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----T-----------CEECCTTSHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----C-----------CceeccCCHHHHHHHHHhcCCC
Confidence            479999    9999999999999994 89999999986310     0           1333334688888888764589


Q ss_pred             EEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||+||.                |+.++.++++++++.+. +||++||..+|+.... +++|+++..+. ..|+..|..
T Consensus        60 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~-~~Y~~sK~~  136 (273)
T 2ggs_A           60 VIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPI-NYYGLSKLL  136 (273)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCC-CHHHHHHHH
Confidence            99999983                46789999999999886 9999999999987654 78888877765 789999887


Q ss_pred             HHhC---CcEEEEecCeeec
Q 025587          219 SENF---SNWASFRPQYMIG  235 (250)
Q Consensus       219 ~e~~---~~~~ilRp~~i~G  235 (250)
                      .|..   ++++++||+.+||
T Consensus       137 ~e~~~~~~~~~~iR~~~v~G  156 (273)
T 2ggs_A          137 GETFALQDDSLIIRTSGIFR  156 (273)
T ss_dssp             HHHHHCCTTCEEEEECCCBS
T ss_pred             HHHHHhCCCeEEEecccccc
Confidence            7663   6899999999998

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.80  E-value=2.4e-19  Score=159.85  Aligned_cols=118  Identities=16%  Similarity=0.165  Sum_probs=100.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      |+||||    ||+||||++|+++|+++|+ +|++++|+                           .|++++.+++++  +
T Consensus         1 M~VlVt----GatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~--~   47 (369)
T 3st7_A            1 MNIVIT----GAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLK--A   47 (369)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHH--C
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhcc--C
Confidence            589999    9999999999999999999 99998875                           277888888886  8


Q ss_pred             cEEEeCCC------------cCHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHH----
Q 025587          154 DVVLDNNG------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEK----  216 (250)
Q Consensus       154 d~Vi~~ag------------~~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k----  216 (250)
                      |+|||+|+            .|+.++.+++++|++.+++ +||++||.++|+.                +.|+..|    
T Consensus        48 d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~----------------~~Y~~sK~~~E  111 (369)
T 3st7_A           48 DFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQD----------------NPYGESKLQGE  111 (369)
T ss_dssp             SEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSC----------------SHHHHHHHHHH
T ss_pred             CEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCC----------------CCchHHHHHHH
Confidence            99999998            3788999999999999987 9999999999871                4465555    


Q ss_pred             -HHHH----hCCcEEEEecCeeecCCCCCC
Q 025587          217 -YISE----NFSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       217 -~~~e----~~~~~~ilRp~~i~G~~~~~~  241 (250)
                       ++.+    .+++++++||+.+||++..+.
T Consensus       112 ~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~  141 (369)
T 3st7_A          112 QLLREYAEEYGNTVYIYRWPNLFGKWCKPN  141 (369)
T ss_dssp             HHHHHHHHHHCCCEEEEEECEEECTTCCTT
T ss_pred             HHHHHHHHHhCCCEEEEECCceeCCCCCCC
Confidence             4433    479999999999999987654

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.80  E-value=1.3e-19  Score=168.39  Aligned_cols=160  Identities=19%  Similarity=0.242  Sum_probs=115.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--CCCc-----ccchhcCCceEEeCCH---H
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNR-----FNEIVSAGGKTVWGDP---A  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~-----~~~~~~~~v~~v~~D~---~  142 (250)
                      .+|+||||    |||||||++|+++|+++|++|++++|+.+........  ....     +......+++++.+|.   +
T Consensus       149 ~~~~VLVT----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  224 (508)
T 4f6l_B          149 PLGNTLLT----GATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  224 (508)
T ss_dssp             CCEEEEES----CTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCS
T ss_pred             CCCeEEEE----CCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccc
Confidence            35899999    9999999999999999999999999987632110000  0000     0112245678888883   4


Q ss_pred             HHHhhhcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCccc--ccC--CCCCCccCCCCC
Q 025587          143 EVGNVVGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGI--YKP--ADEPPHVEGDVV  205 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~v--y~~--~~~~~~~e~~~~  205 (250)
                      .+. ...  ++|+|||+|+             .|+.++.+++++|++ +.++|||+||.++  |..  ..+.+++|+++.
T Consensus       225 ~l~-~~~--~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~  300 (508)
T 4f6l_B          225 DVV-LPE--NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVY  300 (508)
T ss_dssp             SCC-CSS--CCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSC
T ss_pred             cCC-Ccc--CCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCccccccccc
Confidence            444 333  4899999998             378999999999999 7789999999998  222  234567787763


Q ss_pred             CC--CCChhHHHHHHHHh--------CCcEEEEecCeeecCCCCC
Q 025587          206 KP--DAGHVQVEKYISEN--------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       206 ~~--~~~~y~~~k~~~e~--------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .+  ....|+.+|+..|.        +++++++||+.|||+....
T Consensus       301 ~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          301 KGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             SSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSC
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCC
Confidence            21  23778877765553        7999999999999998654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=2e-19  Score=154.24  Aligned_cols=134  Identities=17%  Similarity=0.278  Sum_probs=104.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +||||    ||+|+||++++++|+++  |++|++++|+++....           +...+++++.+|   ++++.+++++
T Consensus         1 ~ilVt----GatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~   65 (286)
T 2zcu_A            1 MIAIT----GATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-----------LAAQGITVRQADYGDEAALTSALQG   65 (286)
T ss_dssp             CEEEE----STTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-----------HHHTTCEEEECCTTCHHHHHHHTTT
T ss_pred             CEEEE----cCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-----------hhcCCCeEEEcCCCCHHHHHHHHhC
Confidence            58999    99999999999999999  9999999998754332           223356677776   7888899887


Q ss_pred             CcccEEEeCCCc----CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCcEE
Q 025587          151 VTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWA  226 (250)
Q Consensus       151 ~~~d~Vi~~ag~----~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~~~  226 (250)
                        +|+|||+++.    ++.++++++++|++.++++||++||.++|..    +      .....++...|+++.+.+++++
T Consensus        66 --~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~----~------~~y~~sK~~~e~~~~~~~~~~~  133 (286)
T 2zcu_A           66 --VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS----P------LGLADEHIETEKMLADSGIVYT  133 (286)
T ss_dssp             --CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTTTC----C------STTHHHHHHHHHHHHHHCSEEE
T ss_pred             --CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC----c------chhHHHHHHHHHHHHHcCCCeE
Confidence              7999999984    5788999999999999999999999988721    1      1111345566667777789999


Q ss_pred             EEecCeeecC
Q 025587          227 SFRPQYMIGS  236 (250)
Q Consensus       227 ilRp~~i~G~  236 (250)
                      ++||+.++++
T Consensus       134 ilrp~~~~~~  143 (286)
T 2zcu_A          134 LLRNGWYSEN  143 (286)
T ss_dssp             EEEECCBHHH
T ss_pred             EEeChHHhhh
Confidence            9999877665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.78  E-value=7.7e-19  Score=155.23  Aligned_cols=148  Identities=20%  Similarity=0.258  Sum_probs=110.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||||+||++|+++|+++||+|++++|+.+......    ..+..+...+++++.+|   .+++.++++.
T Consensus        10 ~~~IlVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~----~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~   81 (346)
T 3i6i_A           10 KGRVLIA----GATGFIGQFVATASLDAHRPTYILARPGPRSPSKA----KIFKALEDKGAIIVYGLINEQEAMEKILKE   81 (346)
T ss_dssp             -CCEEEE----CTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH----HHHHHHHHTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCeEEEE----CCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHH----HHHHHHHhCCcEEEEeecCCHHHHHHHHhh
Confidence            4689999    99999999999999999999999999863211000    01112334578888877   7889999983


Q ss_pred             CcccEEEeCCCc-CHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCCCChhH-----HHHHHHHhCC
Q 025587          151 VTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ-----VEKYISENFS  223 (250)
Q Consensus       151 ~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~-----~~k~~~e~~~  223 (250)
                      .++|+|||+++. |+.++.+++++|++.| +++||+ |   .|+.    +.+|.++..+. ..|+     +|+++.+.++
T Consensus        82 ~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~-~~y~~sK~~~e~~l~~~g~  152 (346)
T 3i6i_A           82 HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPG-LNMYREKRRVRQLVEESGI  152 (346)
T ss_dssp             TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTH-HHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCc-chHHHHHHHHHHHHHHcCC
Confidence            348999999995 8999999999999999 999986 4   4543    23344444433 4455     4555666689


Q ss_pred             cEEEEecCeeecCCC
Q 025587          224 NWASFRPQYMIGSGN  238 (250)
Q Consensus       224 ~~~ilRp~~i~G~~~  238 (250)
                      +++++|||.++|...
T Consensus       153 ~~tivrpg~~~g~~~  167 (346)
T 3i6i_A          153 PFTYICCNSIASWPY  167 (346)
T ss_dssp             CBEEEECCEESSCCC
T ss_pred             CEEEEEecccccccC
Confidence            999999999999753

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.76  E-value=9.6e-18  Score=149.23  Aligned_cols=140  Identities=18%  Similarity=0.206  Sum_probs=105.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhcCCceEEeCC----HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~  147 (250)
                      +|+||||    ||+|+||++|+++|+++|++|++++|+.+..  ..+..          ..+++++.+|    ++++.++
T Consensus         5 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~----------~~~v~~v~~D~l~d~~~l~~~   70 (352)
T 1xgk_A            5 KKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA----------IPNVTLFQGPLLNNVPLMDTL   70 (352)
T ss_dssp             CCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT----------STTEEEEESCCTTCHHHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh----------cCCcEEEECCccCCHHHHHHH
Confidence            5789999    9999999999999999999999999987543  11100          1245555555    6778888


Q ss_pred             hcCCcccEEEeCCCc-----CHHhHHHHHHHHHhCC-CCEEEEEcCcc--cccCCCCCCccCCCCCCCCCChhHHHHHHH
Q 025587          148 VGGVTFDVVLDNNGK-----NLDAVRPVADWAKSSG-VKQFLFISSAG--IYKPADEPPHVEGDVVKPDAGHVQVEKYIS  219 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~-----~~~~~~~ll~~~~~~~-~~~~v~iSS~~--vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~  219 (250)
                      +++  +|+|||+++.     |..+ ++++++|++.+ +++||++||.+  .|+...        +.....+|+..|+++.
T Consensus        71 ~~~--~d~Vi~~a~~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~--------~~~y~~sK~~~E~~~~  139 (352)
T 1xgk_A           71 FEG--AHLAFINTTSQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWP--------AVPMWAPKFTVENYVR  139 (352)
T ss_dssp             HTT--CSEEEECCCSTTSCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCC--------CCTTTHHHHHHHHHHH
T ss_pred             Hhc--CCEEEEcCCCCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCC--------CccHHHHHHHHHHHHH
Confidence            887  7999999874     3444 99999999998 99999999985  443211        1112236677777777


Q ss_pred             HhCCcEEEEecCeeecCCCC
Q 025587          220 ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       220 e~~~~~~ilRp~~i~G~~~~  239 (250)
                      +.+++++++||+ +||++..
T Consensus       140 ~~gi~~~ivrpg-~~g~~~~  158 (352)
T 1xgk_A          140 QLGLPSTFVYAG-IYNNNFT  158 (352)
T ss_dssp             TSSSCEEEEEEC-EEGGGCB
T ss_pred             HcCCCEEEEecc-eecCCch
Confidence            778999999987 7888654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.75  E-value=3.1e-18  Score=147.26  Aligned_cols=143  Identities=17%  Similarity=0.113  Sum_probs=107.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+.++.+|   .+++.++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~~~~~~~   71 (281)
T 3m1a_A            4 SAKVWLVT----GASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA--------AYPDRAEAISLDVTDGERIDVVAA   71 (281)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH--------HCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------hccCCceEEEeeCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765543211        112345666666   677776665


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|+|||+||                    +|+.+    ++.+++.+++.+.++||++||...+.+...    
T Consensus        72 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  147 (281)
T 3m1a_A           72 DVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAG----  147 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----
T ss_pred             HHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCC----
Confidence            32     4899999999                    24556    777777778778889999999876643221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+++|...+            .+++++++|||.++++...
T Consensus       148 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  190 (281)
T 3m1a_A          148 --------FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFG  190 (281)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccccc
Confidence                    267888885433            3699999999999988644

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.75  E-value=2.2e-18  Score=149.63  Aligned_cols=145  Identities=20%  Similarity=0.270  Sum_probs=106.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc--ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS--DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~--~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||||+||++++++|+++|++|++++|+.+..  +..     ..+..+...+++++.+|   ++++.+++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            4 KSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV-----QMLLYFKQLGAKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHH-----HHHHHHHTTTCEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHH-----HHHHHHHhCCeEEEeCCCCCHHHHHHHH
Confidence            4789999    9999999999999999999999999986431  000     00011223467777776   78899999


Q ss_pred             cCCcccEEEeCCCc-----CHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHH
Q 025587          149 GGVTFDVVLDNNGK-----NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYI  218 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~-----~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~  218 (250)
                      ++  +|+|||+++.     ++.++.+++++|++.| ++|||+ |   +|+.....+   ..+..+.    .++..+|+++
T Consensus        75 ~~--~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y~sK~~~e~~~  145 (313)
T 1qyd_A           75 KQ--VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITFIDKRKVRRAI  145 (313)
T ss_dssp             TT--CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHHHHHHHHHHHH
T ss_pred             hC--CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchHHHHHHHHHHH
Confidence            87  7999999984     6889999999999998 999985 3   455322211   1122221    2344566677


Q ss_pred             HHhCCcEEEEecCeeecC
Q 025587          219 SENFSNWASFRPQYMIGS  236 (250)
Q Consensus       219 ~e~~~~~~ilRp~~i~G~  236 (250)
                      .+.+++++++||+.++|+
T Consensus       146 ~~~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A          146 EAASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             HHTTCCBCEEECCEEHHH
T ss_pred             HhcCCCeEEEEeceeccc
Confidence            777899999999999885

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.74  E-value=2.5e-18  Score=144.74  Aligned_cols=145  Identities=18%  Similarity=0.124  Sum_probs=101.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC--c
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--T  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~--~  152 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+.               .+..+..|.+++.++++..  +
T Consensus         2 k~vlVt----Gasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~~~~   62 (255)
T 2dkn_A            2 SVIAIT----GSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRCGGV   62 (255)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHHTTC
T ss_pred             cEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHcCCC
Confidence            689999    999999999999999999999999998754331               1122223567777777621  4


Q ss_pred             ccEEEeCCCc-------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCC-ccC-------CCC---
Q 025587          153 FDVVLDNNGK-------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP-HVE-------GDV---  204 (250)
Q Consensus       153 ~d~Vi~~ag~-------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~-~~e-------~~~---  204 (250)
                      +|+|||+||.             |+.++.++++++.+    .+.++||++||..+|+.....+ ..|       ..+   
T Consensus        63 ~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (255)
T 2dkn_A           63 LDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIEL  142 (255)
T ss_dssp             CSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHH
T ss_pred             ccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhh
Confidence            8999999983             46677777776654    4678999999999887542111 100       000   


Q ss_pred             ---CCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          205 ---VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       205 ---~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                         ..+....|+.+|...+            .+++++++|||.++|+..
T Consensus       143 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~  191 (255)
T 2dkn_A          143 AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL  191 (255)
T ss_dssp             HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh
Confidence               0012256887775433            379999999999999853

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.74  E-value=3.5e-18  Score=149.06  Aligned_cols=144  Identities=21%  Similarity=0.259  Sum_probs=105.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .|+++||||    ||+|+||++++++|+++|++|++++|+.+....       .+..+...+++++.+|   ++++.+++
T Consensus         9 ~m~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~-------~~~~l~~~~v~~v~~Dl~d~~~l~~a~   77 (318)
T 2r6j_A            9 GMKSKILIF----GGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTT-------LLDEFQSLGAIIVKGELDEHEKLVELM   77 (318)
T ss_dssp             CCCCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHH-------HHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCeEEEE----CCCchHHHHHHHHHHHCCCcEEEEECCCCchhh-------HHHHhhcCCCEEEEecCCCHHHHHHHH
Confidence            456789999    999999999999999999999999998741110       0111233567777777   78899999


Q ss_pred             cCCcccEEEeCCCc-CHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHHHHhC
Q 025587          149 GGVTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENF  222 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~~e~~  222 (250)
                      ++  +|+|||+++. .+.++++++++|++.+ +++||+ |   +|+...    +|..+..+.    .++..+|+++.+.+
T Consensus        78 ~~--~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~  147 (318)
T 2r6j_A           78 KK--VDVVISALAFPQILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALIERKRMIRRAIEEAN  147 (318)
T ss_dssp             TT--CSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cC--CCEEEECCchhhhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhHHHHHHHHHHHHhcC
Confidence            87  7999999985 3678999999999988 999985 4   354321    122221111    24455666777778


Q ss_pred             CcEEEEecCeeecC
Q 025587          223 SNWASFRPQYMIGS  236 (250)
Q Consensus       223 ~~~~ilRp~~i~G~  236 (250)
                      ++++++||+.+++.
T Consensus       148 ~~~~~lr~~~~~~~  161 (318)
T 2r6j_A          148 IPYTYVSANCFASY  161 (318)
T ss_dssp             CCBEEEECCEEHHH
T ss_pred             CCeEEEEcceehhh
Confidence            99999999988764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.73  E-value=7e-18  Score=143.69  Aligned_cols=146  Identities=18%  Similarity=0.211  Sum_probs=95.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus        13 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   83 (266)
T 1xq1_A           13 KAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK----WQ-KKGFQVTGSVCDASLRPEREKLMQ   83 (266)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeeEEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999986543321100    00 012245566666   666666664


Q ss_pred             C------CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~------~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....   
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---  160 (266)
T 1xq1_A           84 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---  160 (266)
T ss_dssp             HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC---
Confidence            2      358999999982                    456667777666    5567889999999876653221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+.+|...+            .+++++++|||.++++..+
T Consensus       161 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  203 (266)
T 1xq1_A          161 ---------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE  203 (266)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhh
Confidence                     256887774432            2799999999999999754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.73  E-value=9.7e-18  Score=145.17  Aligned_cols=145  Identities=18%  Similarity=0.215  Sum_probs=105.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-cc---ccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NS---DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~---~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.. ..   ++.     ..+..+...+++++.+|   ++++.+
T Consensus         2 ~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-----~~~~~l~~~~v~~v~~D~~d~~~l~~   72 (307)
T 2gas_A            2 ENKILIL----GPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKE-----ELIDNYQSLGVILLEGDINDHETLVK   72 (307)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHH-----HHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred             CcEEEEE----CCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHH-----HHHHHHHhCCCEEEEeCCCCHHHHHH
Confidence            5789999    99999999999999999999999999861 10   000     00111223567777776   788999


Q ss_pred             hhcCCcccEEEeCCCc-CHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHHHH
Q 025587          147 VVGGVTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE  220 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~~e  220 (250)
                      ++++  +|+|||+++. .+.++.+++++|++.| ++|||+ |   +|+...    ++..+..+.    .++..+|+++.+
T Consensus        73 ~~~~--~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~  142 (307)
T 2gas_A           73 AIKQ--VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVFEEKASIRRVIEA  142 (307)
T ss_dssp             HHTT--CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHhC--CCEEEECCcccccccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHHHHHHHHHHHHHH
Confidence            9987  7999999995 4788999999999998 999984 3   354321    122222221    234455556666


Q ss_pred             hCCcEEEEecCeeecCC
Q 025587          221 NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       221 ~~~~~~ilRp~~i~G~~  237 (250)
                      .+++++++||+.++++.
T Consensus       143 ~~i~~~~lrp~~~~~~~  159 (307)
T 2gas_A          143 EGVPYTYLCCHAFTGYF  159 (307)
T ss_dssp             HTCCBEEEECCEETTTT
T ss_pred             cCCCeEEEEcceeeccc
Confidence            78999999999998864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.72  E-value=2.5e-17  Score=138.25  Aligned_cols=141  Identities=20%  Similarity=0.180  Sum_probs=103.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.         ..+++++.+|   .+++.++++
T Consensus         6 ~~~~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 1cyd_A            6 SGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---------CPGIEPVCVDLGDWDATEKALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------STTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------ccCCCcEEecCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987544322110         1234445555   788888887


Q ss_pred             CC-cccEEEeCCCc--------------------CHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      .. ++|+|||+||.                    |+.++.++++++.+    .+ .++||++||...|.....       
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  145 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------  145 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC-------
Confidence            43 58999999982                    45666666666544    35 689999999887764321       


Q ss_pred             CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                           ...|+.+|...+            .+++++++|||.++|+..
T Consensus       146 -----~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~  187 (244)
T 1cyd_A          146 -----LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMG  187 (244)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHH
T ss_pred             -----cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccc
Confidence                 256887774433            268999999999999853

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.72  E-value=5.7e-17  Score=138.34  Aligned_cols=141  Identities=18%  Similarity=0.164  Sum_probs=104.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+....              ..+..+.+|   ++++.+++
T Consensus        26 ~~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~~   87 (260)
T 3un1_A           26 NQQKVVVIT----GASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------------PDIHTVAGDISKPETADRIV   87 (260)
T ss_dssp             TTCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------------TTEEEEESCTTSHHHHHHHH
T ss_pred             cCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------------CceEEEEccCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998754331              134555555   67777766


Q ss_pred             cCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+......  
T Consensus        88 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~--  165 (260)
T 3un1_A           88 REGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM--  165 (260)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC--
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC--
Confidence            521     5899999998                    2455666666655    56778899999998765432211  


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~~  240 (250)
                              ....|+++|...+.            ++++++++||.++++....
T Consensus       166 --------~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  210 (260)
T 3un1_A          166 --------PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA  210 (260)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred             --------ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence                    12568877743332            6999999999999997654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.72  E-value=1.4e-17  Score=141.93  Aligned_cols=143  Identities=22%  Similarity=0.250  Sum_probs=103.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+..+.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~v~~~~~   73 (260)
T 1nff_A            6 TGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE--------LADAARYVHLDVTQPAQWKAAVD   73 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------hhcCceEEEecCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999987544322110        11124555555   677777765


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+....     
T Consensus        74 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  148 (260)
T 1nff_A           74 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-----  148 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC-----
Confidence            21     48999999982                    33444    5666667777788999999988765421     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                             ....|+.+|...+            .+++++++|||.++++...
T Consensus       149 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          149 -------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence                   1256887774332            3799999999999998643

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.71  E-value=6.2e-17  Score=138.61  Aligned_cols=141  Identities=17%  Similarity=0.136  Sum_probs=103.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+..           ..+..+.+|   .+++.+++
T Consensus        14 ~~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~   78 (266)
T 3p19_A           14 SMKKLVVIT----GASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-----------PNTLCAQVDVTDKYTFDTAI   78 (266)
T ss_dssp             -CCCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-----------TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-----------CCceEEEecCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998765543322           134455555   67777666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||.                    |+.++.+    +++.+++.+.++||++||...+.....   
T Consensus        79 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---  155 (266)
T 3p19_A           79 TRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD---  155 (266)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC---
Confidence            521     58999999992                    4555555    555556667789999999886644222   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+            .++++++|+||.|.++...
T Consensus       156 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  198 (266)
T 3p19_A          156 ---------HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLS  198 (266)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGG
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhh
Confidence                     267888884433            3799999999999988643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.71  E-value=4.2e-17  Score=133.20  Aligned_cols=127  Identities=13%  Similarity=0.118  Sum_probs=97.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC-c
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV-T  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~-~  152 (250)
                      +|+||||    ||+|+||++++++|+ +|++|++++|+.+                   .+..+..|++++.+++++. +
T Consensus         3 kM~vlVt----Gasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~   58 (202)
T 3d7l_A            3 AMKILLI----GASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGK   58 (202)
T ss_dssp             SCEEEEE----TTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEE----cCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCC
Confidence            3589999    999999999999999 9999999999763                   1223334677777777642 4


Q ss_pred             ccEEEeCCC--------------------cCHHhHHHHHHHHHhC---CCCEEEEEcCcccccCCCCCCccCCCCCCCCC
Q 025587          153 FDVVLDNNG--------------------KNLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDVVKPDA  209 (250)
Q Consensus       153 ~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~  209 (250)
                      +|+|||+||                    .|+.++.++++++.+.   + ++||++||...+.+...            .
T Consensus        59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~------------~  125 (202)
T 3d7l_A           59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQ------------G  125 (202)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTT------------C
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCc------------c
Confidence            899999998                    3567788888888775   4 69999999876543211            2


Q ss_pred             ChhHHHHHHHH-----------hCCcEEEEecCeeecCC
Q 025587          210 GHVQVEKYISE-----------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       210 ~~y~~~k~~~e-----------~~~~~~ilRp~~i~G~~  237 (250)
                      ..|+..|...+           .+++++++|||.++++.
T Consensus       126 ~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~  164 (202)
T 3d7l_A          126 ASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW  164 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch
Confidence            56887774433           26899999999999985

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.71  E-value=6.7e-17  Score=138.58  Aligned_cols=144  Identities=19%  Similarity=0.177  Sum_probs=106.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        .....+..+.+|   .+++.+++
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~   76 (271)
T 3tzq_B            9 LENKVAIIT----GACGGIGLETSRVLARAGARVVLADLPETDLAGAAA--------SVGRGAVHHVVDLTNEVSVRALI   76 (271)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH--------HHCTTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--------HhCCCeEEEECCCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998866543211        113345556665   67777666


Q ss_pred             cCC-----cccEEEeCCCc----------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~----------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +..     ++|+|||+||.                      |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-  155 (271)
T 3tzq_B           77 DFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM-  155 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS-
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC-
Confidence            521     48999999982                      455566666665    6677889999999876644221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+++|...+            .++++++++||.++++...
T Consensus       156 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          156 -----------STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             -----------ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence                       267888884443            3799999999999999765

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.71  E-value=3.3e-17  Score=141.92  Aligned_cols=148  Identities=21%  Similarity=0.305  Sum_probs=105.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+|+||    ||+|+||++++++|+++|++|++++|+.+....-.+  ...+..+...+++++.+|   ++++.+++++
T Consensus         4 ~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~   77 (308)
T 1qyc_A            4 RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK--AQLLESFKASGANIVHGSIDDHASLVEAVKN   77 (308)
T ss_dssp             CCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH--HHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHH--HHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence            4789999    999999999999999999999999998643200000  000111224567777776   7888999987


Q ss_pred             CcccEEEeCCCc-CHHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHHHHhCCc
Q 025587          151 VTFDVVLDNNGK-NLDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENFSN  224 (250)
Q Consensus       151 ~~~d~Vi~~ag~-~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~~e~~~~  224 (250)
                        +|+|||+++. .+.++.+++++|++.| ++|||+ |+   |+...    .|..+..+.    .++..+|+++.+.+++
T Consensus        78 --~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~~~  147 (308)
T 1qyc_A           78 --VDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNVHAVEPAKSVFEVKAKVRRAIEAEGIP  147 (308)
T ss_dssp             --CSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSCCCCTTHHHHHHHHHHHHHHHHHHTCC
T ss_pred             --CCEEEECCcchhhhhHHHHHHHHHhcCCCceEee-cc---cccCc----cccccCCcchhHHHHHHHHHHHHHhcCCC
Confidence              7999999995 4678999999999998 999984 43   44321    122222221    2344556667777899


Q ss_pred             EEEEecCeeecCC
Q 025587          225 WASFRPQYMIGSG  237 (250)
Q Consensus       225 ~~ilRp~~i~G~~  237 (250)
                      ++++||+.++|..
T Consensus       148 ~~~~r~~~~~~~~  160 (308)
T 1qyc_A          148 YTYVSSNCFAGYF  160 (308)
T ss_dssp             BEEEECCEEHHHH
T ss_pred             eEEEEeceecccc
Confidence            9999999998853

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.70  E-value=2.7e-17  Score=137.46  Aligned_cols=141  Identities=18%  Similarity=0.174  Sum_probs=96.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +  .++..+.+|   .+++.++++
T Consensus         4 ~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~--~~~~~~~~D~~~~~~~~~~~~   70 (234)
T 2ehd_A            4 MKGAVLIT----GASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE-------L--EGALPLPGDVREEGDWARAVA   70 (234)
T ss_dssp             CCCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------S--TTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------h--hhceEEEecCCCHHHHHHHHH
Confidence            56789999    9999999999999999999999999986544322110       0  145555555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+.+..     
T Consensus        71 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----  145 (234)
T 2ehd_A           71 AMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK-----  145 (234)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC-----
Confidence            2     148999999982                    23333    4667777777889999999987665321     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             ....|+..|...+            .+++++++|||.+.++..
T Consensus       146 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  188 (234)
T 2ehd_A          146 -------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA  188 (234)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------
T ss_pred             -------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcc
Confidence                   1266888875322            369999999999988754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.70  E-value=3e-17  Score=138.29  Aligned_cols=147  Identities=15%  Similarity=0.177  Sum_probs=102.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.......+.++.+|   ++++.++++
T Consensus         1 ~~k~vlIt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (250)
T 2cfc_A            1 MSRVAIVT----GASSGNGLAIATRFLARGDRVAALDLSAETLEETART----HWHAYADKVLRVRADVADEGDVNAAIA   72 (250)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322110    000012345566666   677777665


Q ss_pred             C-----CcccEEEeCCCc-----------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK-----------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-----------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      .     .++|+|||+||.                       |+.++    +.+++.+++.+.++||++||...+..... 
T Consensus        73 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  151 (250)
T 2cfc_A           73 ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG-  151 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-
Confidence            2     148999999983                       22233    44556666667889999999876654221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+.+|...+.            +++++++|||.++++..+
T Consensus       152 -----------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  194 (250)
T 2cfc_A          152 -----------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ  194 (250)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence                       2668877744332            799999999999999754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.70  E-value=5.9e-17  Score=140.14  Aligned_cols=156  Identities=15%  Similarity=0.079  Sum_probs=112.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.        ....+.++.+|   .+++.++++
T Consensus        15 ~gk~vlVT----Gas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~v~~~~~   82 (291)
T 3rd5_A           15 AQRTVVIT----GANSGLGAVTARELARRGATVIMAVRDTRKGEAAART--------MAGQVEVRELDLQDLSSVRRFAD   82 (291)
T ss_dssp             TTCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--------SSSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hcCCeeEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987655433221        12345666666   778888877


Q ss_pred             CC-cccEEEeCCC------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC-CCccCCCCCCCCC
Q 025587          150 GV-TFDVVLDNNG------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE-PPHVEGDVVKPDA  209 (250)
Q Consensus       150 ~~-~~d~Vi~~ag------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~-~~~~e~~~~~~~~  209 (250)
                      .. ++|+|||+||                  +|+.++.++++++.....++||++||...+..... ....+.....+..
T Consensus        83 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~  162 (291)
T 3rd5_A           83 GVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPW  162 (291)
T ss_dssp             TCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHH
T ss_pred             hcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCc
Confidence            54 6899999999                  36788999999998877789999999887754321 1111111112223


Q ss_pred             ChhHHHHHHHHh------------C--CcEEEEecCeeecCCCCC
Q 025587          210 GHVQVEKYISEN------------F--SNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       210 ~~y~~~k~~~e~------------~--~~~~ilRp~~i~G~~~~~  240 (250)
                      ..|+++|...+.            +  ++++.++||.|.++....
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~  207 (291)
T 3rd5_A          163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA  207 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc
Confidence            679988854332            4  899999999998886543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.70  E-value=3e-17  Score=138.57  Aligned_cols=144  Identities=13%  Similarity=0.174  Sum_probs=101.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCc-eEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+       ++ ...+ ..+.+|   .+++.+++
T Consensus        10 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~~~D~~~~~~~~~~~   77 (254)
T 2wsb_A           10 DGACAAVT----GAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ-------EL-GAAVAARIVADVTDAEAMTAAA   77 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HH-GGGEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------Hh-cccceeEEEEecCCHHHHHHHH
Confidence            45799999    999999999999999999999999998754332110       11 2233 555565   66776666


Q ss_pred             cC----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.    .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+......   
T Consensus        78 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---  154 (254)
T 2wsb_A           78 AEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ---  154 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS---
T ss_pred             HHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC---
Confidence            42    248999999982                    3444    4445555666678899999998876542211   


Q ss_pred             CCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                            + ...|+.+|...+.            +++++++|||.++++..
T Consensus       155 ------~-~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~  197 (254)
T 2wsb_A          155 ------F-ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMT  197 (254)
T ss_dssp             ------C-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHH
T ss_pred             ------c-chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhh
Confidence                  1 1568877744332            68999999999999853

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.70  E-value=2.1e-16  Score=133.80  Aligned_cols=136  Identities=15%  Similarity=0.100  Sum_probs=95.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+...               .++..+.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~d~~~~~~~~~   66 (250)
T 2fwm_X            6 SGKNVWVT----GAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ---------------YPFATEVMDVADAAQVAQVCQ   66 (250)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCCCSSC---------------CSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc---------------CCceEEEcCCCCHHHHHHHHH
Confidence            35799999    99999999999999999999999999864210               024444455   777777765


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.+..     
T Consensus        67 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  141 (250)
T 2fwm_X           67 RLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRI-----  141 (250)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----
Confidence            2     158999999982                    345555555555    556778999999988764321     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                             ....|+++|...+            .+++++++|||.++++...
T Consensus       142 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  185 (250)
T 2fwm_X          142 -------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQR  185 (250)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccc
Confidence                   1266888774333            2799999999999998643

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.70  E-value=3.1e-17  Score=143.13  Aligned_cols=147  Identities=17%  Similarity=0.195  Sum_probs=104.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+. +....-.   ...+..+...+++++.+|   ++++.+++
T Consensus         3 ~~~~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~l~~~~~~~v~~v~~D~~d~~~l~~a~   75 (321)
T 3c1o_A            3 HMEKIIIY----GGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSS---VQLREEFRSMGVTIIEGEMEEHEKMVSVL   75 (321)
T ss_dssp             -CCCEEEE----TTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHH---HHHHHHHHHTTCEEEECCTTCHHHHHHHH
T ss_pred             cccEEEEE----cCCchhHHHHHHHHHhCCCcEEEEECCcccccChHH---HHHHHHhhcCCcEEEEecCCCHHHHHHHH
Confidence            46789999    9999999999999999999999999986 2110000   000111223567777776   78899999


Q ss_pred             cCCcccEEEeCCCcC-HHhHHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHHHHhC
Q 025587          149 GGVTFDVVLDNNGKN-LDAVRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISENF  222 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~-~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~~e~~  222 (250)
                      ++  +|+|||+++.. +.++++++++|++.| ++|||+ |   +|+...    +|..+..+.    .++..+|+++.+.+
T Consensus        76 ~~--~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y~sK~~~e~~~~~~~  145 (321)
T 3c1o_A           76 KQ--VDIVISALPFPMISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPFESVLEKKRIIRRAIEAAA  145 (321)
T ss_dssp             TT--CSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cC--CCEEEECCCccchhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCcchHHHHHHHHHHHHHHcC
Confidence            88  79999999954 688999999999998 999983 3   454321    222221111    23445666666778


Q ss_pred             CcEEEEecCeeecC
Q 025587          223 SNWASFRPQYMIGS  236 (250)
Q Consensus       223 ~~~~ilRp~~i~G~  236 (250)
                      +++++|||+.+++.
T Consensus       146 ~~~~~lrp~~~~~~  159 (321)
T 3c1o_A          146 LPYTYVSANCFGAY  159 (321)
T ss_dssp             CCBEEEECCEEHHH
T ss_pred             CCeEEEEeceeccc
Confidence            99999999998875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.70  E-value=3.6e-17  Score=139.22  Aligned_cols=147  Identities=16%  Similarity=0.237  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +... ...++.++.+|   ++++.+++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (260)
T 2z1n_A            6 QGKLAVVT----AGSSGLGFASALELARNGARLLLFSRNREKLEAAASR----IASLVSGAQVDIVAGDIREPGDIDRLF   77 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhcCCCCeEEEEEccCCCHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322110    0000 01145566666   67777766


Q ss_pred             c----CCcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          149 G----GVTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~----~~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +    ...+|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+.....    
T Consensus        78 ~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  153 (260)
T 2z1n_A           78 EKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD----  153 (260)
T ss_dssp             HHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC----
Confidence            5    1128999999982                    34444    55666666667889999999887754221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+.+|...+            .++++++|+||.++++...
T Consensus       154 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          154 --------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             --------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence                    256877763322            2799999999999998754

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.70  E-value=5.4e-17  Score=137.81  Aligned_cols=141  Identities=21%  Similarity=0.209  Sum_probs=102.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       + ...+..+.+|   ++++.++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~   71 (254)
T 1hdc_A            4 SGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE-------L-GDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------T-GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-CCceeEEEecCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544322111       1 2234555555   677776665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....     
T Consensus        72 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  146 (254)
T 1hdc_A           72 YAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA-----  146 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----
Confidence            2     148999999982                    2333    34677777777788999999987664321     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ....|+++|...+            .+++++++|||.++++.
T Consensus       147 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1hdc_A          147 -------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence                   1266888774433            26899999999999874

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.70  E-value=1.2e-16  Score=134.10  Aligned_cols=141  Identities=19%  Similarity=0.207  Sum_probs=102.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +  .+++++.+|   ++++.++++
T Consensus         6 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~--~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 3d3w_A            6 AGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-------C--PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------S--TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCcEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------c--CCCCEEEEeCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999987544322110       0  134444555   788888886


Q ss_pred             CC-cccEEEeCCCc--------------------CHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 GV-TFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      .. ++|+|||+||.                    |+.++.++++++.+    .+ .++||++||...+....        
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  144 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------  144 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--------
Confidence            43 58999999982                    45555555555543    35 68999999987765421        


Q ss_pred             CCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          204 VVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                          ....|+.+|...+.            +++++++|||.++++..
T Consensus       145 ----~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~  187 (244)
T 3d3w_A          145 ----NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG  187 (244)
T ss_dssp             ----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTH
T ss_pred             ----CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccch
Confidence                12668888744432            68999999999999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.70  E-value=3.4e-17  Score=138.21  Aligned_cols=145  Identities=14%  Similarity=0.164  Sum_probs=102.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   ++++.++++
T Consensus        10 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A           10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDE----IQ-QLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HH-HhCCceEEEEcCCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999987543321100    00 012245556666   677777765


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     .++|+|||+||.                   |+.++.++++++    ++.+.++||++||...|.+...     
T Consensus        81 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  155 (255)
T 1fmc_A           81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN-----  155 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-----
Confidence            2     148999999982                   455666666655    4557789999999887754321     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+.+|...+.            +++++++|||.++++..
T Consensus       156 -------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~  197 (255)
T 1fmc_A          156 -------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDAL  197 (255)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhh
Confidence                   2668877744332            68999999999998753

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.69  E-value=3.7e-17  Score=139.15  Aligned_cols=142  Identities=17%  Similarity=0.156  Sum_probs=102.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        .....+..+.+|   ++++.++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~   74 (259)
T 4e6p_A            7 EGKSALIT----GSARGIGRAFAEAYVREGATVAIADIDIERARQAAA--------EIGPAAYAVQMDVTRQDSIDAAIA   74 (259)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCCceEEEeeCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998755442211        112345556665   677777665


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||                    +|+.++.++++++..    .+ .++||++||...+.....   
T Consensus        75 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  151 (259)
T 4e6p_A           75 ATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL---  151 (259)
T ss_dssp             HHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC---
Confidence            21     5899999999                    245666666666543    23 569999999876644221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+++|...+.            ++++++++||.++++..
T Consensus       152 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  193 (259)
T 4e6p_A          152 ---------VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW  193 (259)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH
T ss_pred             ---------ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh
Confidence                     3678888844332            69999999999999863

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.69  E-value=5.5e-17  Score=136.27  Aligned_cols=145  Identities=17%  Similarity=0.156  Sum_probs=103.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAE  143 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~  143 (250)
                      +|+||||    ||+|+||++++++|+++|+       +|++++|+.+..+.+.+.    +. .....+.++.+|   +++
T Consensus         2 ~k~vlIT----GasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~   72 (244)
T 2bd0_A            2 KHILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE----CR-AEGALTDTITADISDMAD   72 (244)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHH----HH-TTTCEEEEEECCTTSHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHH----HH-ccCCeeeEEEecCCCHHH
Confidence            5789999    9999999999999999999       999999986544322110    00 012235566666   666


Q ss_pred             HHhhhcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCC
Q 025587          144 VGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       144 l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~  194 (250)
                      +.++++.     .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.+.
T Consensus        73 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           73 VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC
Confidence            7666652     248999999982                    455666666655    44567899999998877542


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ..            ...|+.+|...+            .+++++++|||.++++...
T Consensus       153 ~~------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (244)
T 2bd0_A          153 RH------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  197 (244)
T ss_dssp             TT------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             CC------------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh
Confidence            21            266888775433            2689999999999999754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.69  E-value=6.4e-17  Score=138.32  Aligned_cols=146  Identities=21%  Similarity=0.194  Sum_probs=103.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+       ++. ..++.++.+|   ++++.+++
T Consensus        15 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~   83 (278)
T 2bgk_A           15 QDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN-------NIGSPDVISFVHCDVTKDEDVRNLV   83 (278)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHH-------HhCCCCceEEEECCCCCHHHHHHHH
Confidence            45899999    999999999999999999999999997643322110       010 1145666666   67777776


Q ss_pred             cC-----CcccEEEeCCCc----------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK----------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +.     .++|+|||+||.                      |+.++.++++++.+    .+.++||++||...|..... 
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  162 (278)
T 2bgk_A           84 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-  162 (278)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-
Confidence            52     148999999982                      34456666665544    46789999999988765321 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                                ....|+.+|...+            .+++++++|||.++|+....
T Consensus       163 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (278)
T 2bgk_A          163 ----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD  207 (278)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred             ----------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence                      1256887774433            37999999999999997543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.69  E-value=4.5e-17  Score=138.71  Aligned_cols=145  Identities=18%  Similarity=0.190  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.......+.++.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (263)
T 3ai3_A            6 SGKVAVIT----GSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARS----LKEKFGVRVLEVAVDVATPEGVDAVVE   77 (263)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544321100    000002345566666   677777665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|+|||+||.                    |+.++.++++    .+++.+.++||++||...|.+...    
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  153 (263)
T 3ai3_A           78 SVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWY----  153 (263)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC----
Confidence            21     48999999982                    3444444444    445567789999999987764321    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ...|+++|...+            .+++++++|||.++++.
T Consensus       154 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  194 (263)
T 3ai3_A          154 --------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD  194 (263)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             --------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence                    256887774332            37999999999999985

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.69  E-value=1.8e-16  Score=134.61  Aligned_cols=143  Identities=10%  Similarity=0.038  Sum_probs=98.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+...+.        ....+.++.+|   .+++.++++
T Consensus         6 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            6 KSRVFIVT----GASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--------LGAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCceEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999988765543222        12345566666   667776665


Q ss_pred             CC-----cccEEEeCCCc------------------------CHHhHHHHHHHHHh----C------CCCEEEEEcCccc
Q 025587          150 GV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKS----S------GVKQFLFISSAGI  190 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~----~------~~~~~v~iSS~~v  190 (250)
                      ..     ++|++||+||.                        |+.++.++++++..    .      +.++||++||...
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence            21     48999999982                        34556666666544    1      4578999999887


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      +.....            ...|+++|...+            .++++++++||.+.++...
T Consensus       154 ~~~~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  202 (257)
T 3tpc_A          154 FDGQIG------------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA  202 (257)
T ss_dssp             HHCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---
T ss_pred             ccCCCC------------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc
Confidence            654322            267888884332            3799999999999998643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.69  E-value=6.1e-17  Score=137.77  Aligned_cols=142  Identities=18%  Similarity=0.166  Sum_probs=101.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+       ++.  ..++.++.+|   ++++.++
T Consensus         8 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~   76 (260)
T 2ae2_A            8 EGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLT-------QWRSKGFKVEASVCDLSSRSERQEL   76 (260)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            45899999    999999999999999999999999998754432110       111  2235556666   6677766


Q ss_pred             hcC------CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~------~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+....  
T Consensus        77 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  154 (260)
T 2ae2_A           77 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP--  154 (260)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC--
Confidence            642      259999999982                    455555665555    556778999999987664321  


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                                ....|+++|...+.            ++++++++||.+.++.
T Consensus       155 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (260)
T 2ae2_A          155 ----------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  196 (260)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence                      12568888744332            6899999999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.68  E-value=9.9e-17  Score=135.71  Aligned_cols=143  Identities=17%  Similarity=0.219  Sum_probs=97.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+. +..+..       +.. ....+..+.+|   ++++.+++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~~Dv~~~~~v~~~~   73 (249)
T 2ew8_A            6 KDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA-------IRN-LGRRVLTVKCDVSQPGDVEAFG   73 (249)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHH-------HHH-TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHH-------HHh-cCCcEEEEEeecCCHHHHHHHH
Confidence            45799999    9999999999999999999999999987 433310       000 12245556666   66676665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+.+...   
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  150 (249)
T 2ew8_A           74 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA---  150 (249)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC---
Confidence            42     248999999982                    34454    44445566667789999999887754321   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+            .++++++|+||.+.++...
T Consensus       151 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          151 ---------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence                     266887774332            2799999999999998644

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.68  E-value=8.3e-17  Score=138.06  Aligned_cols=146  Identities=18%  Similarity=0.231  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+..+.+|   ++++.++++
T Consensus        20 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   90 (273)
T 1ae1_A           20 KGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEI----WR-EKGLNVEGSVCDLLSRTERDKLMQ   90 (273)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544321100    00 012245556666   666666663


Q ss_pred             C------CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G------VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~------~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .      .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...|.....   
T Consensus        91 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---  167 (273)
T 1ae1_A           91 TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---  167 (273)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC---
Confidence            1      358999999982                    455555555554    4556789999999887754321   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+            .++++++|+||.++++...
T Consensus       168 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  210 (273)
T 1ae1_A          168 ---------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE  210 (273)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhh
Confidence                     266888774332            2799999999999998643

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.68  E-value=9.1e-17  Score=135.56  Aligned_cols=146  Identities=18%  Similarity=0.128  Sum_probs=101.0

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.        +.....+.++.+|   .+++.++
T Consensus        11 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~   78 (249)
T 3f9i_A           11 DLTGKTSLIT----GASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLG--------NALKDNYTIEVCNLANKEECSNL   78 (249)
T ss_dssp             CCTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHCSSEEEEECCTTSHHHHHHH
T ss_pred             cCCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH--------HHhccCccEEEcCCCCHHHHHHH
Confidence            3456899999    99999999999999999999999999875544321        1122345666666   7777777


Q ss_pred             hcCC-cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          148 VGGV-TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       148 l~~~-~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      ++.. ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....      
T Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  152 (249)
T 3f9i_A           79 ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG------  152 (249)
T ss_dssp             HHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC------
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC------
Confidence            7643 58999999992                    445555555444    4456779999999876654321      


Q ss_pred             CCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          203 DVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                            ...|+++|...+            .++++++++||.+.++....
T Consensus       153 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  196 (249)
T 3f9i_A          153 ------QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK  196 (249)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc
Confidence                  267888885333            26899999999999886543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.68  E-value=1.6e-16  Score=132.84  Aligned_cols=133  Identities=17%  Similarity=0.092  Sum_probs=98.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+ .+                .+.++.+|   ++++.++++
T Consensus         1 ~~k~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~-~~----------------~~~~~~~D~~~~~~~~~~~~   59 (242)
T 1uay_A            1 MERSALVT----GGASGLGRAAALALKARGYRVVVLDLRRE-GE----------------DLIYVEGDVTREEDVRRAVA   59 (242)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS----------------SSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEccCcc-cc----------------ceEEEeCCCCCHHHHHHHHH
Confidence            35799999    99999999999999999999999999875 21                12344444   777777775


Q ss_pred             CC----cccEEEeCCCc------------------------CHHhHHHHHHHHHhC----C------CCEEEEEcCcccc
Q 025587          150 GV----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS----G------VKQFLFISSAGIY  191 (250)
Q Consensus       150 ~~----~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~----~------~~~~v~iSS~~vy  191 (250)
                      ..    .+|+|||++|.                        |+.++.++++++.+.    +      .++||++||...+
T Consensus        60 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  139 (242)
T 1uay_A           60 RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF  139 (242)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH
T ss_pred             HHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence            21    48999999982                        344666777766542    2      1399999999887


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      .....            ...|+.+|...+            .+++++++|||.++++..
T Consensus       140 ~~~~~------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  186 (242)
T 1uay_A          140 EGQIG------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL  186 (242)
T ss_dssp             HCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH
T ss_pred             cCCCC------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhh
Confidence            65322            266887773332            279999999999999864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.68  E-value=2.3e-16  Score=134.29  Aligned_cols=141  Identities=21%  Similarity=0.194  Sum_probs=99.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.       + ..++..+.+|   ++++.++++
T Consensus        11 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~d~~~v~~~~~   78 (263)
T 3ak4_A           11 SGRKAIVT----GGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG-------L-ENGGFAVEVDVTKRASVDAAMQ   78 (263)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------C-TTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------H-hcCCeEEEEeCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544322111       0 1134555555   677777765


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+ .++||++||...+....    
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  154 (263)
T 3ak4_A           79 KAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP----  154 (263)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC----
Confidence            21     48999999982                    344555555544    3445 68999999987654321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ....|+++|...+            .++++++||||.++++.
T Consensus       155 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (263)
T 3ak4_A          155 --------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM  196 (263)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence                    1256887775332            27999999999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.68  E-value=1.1e-16  Score=135.48  Aligned_cols=148  Identities=16%  Similarity=0.156  Sum_probs=103.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   ++++.++++
T Consensus        12 ~~k~vlIt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~~   82 (260)
T 3awd_A           12 DNRVAIVT----GGAQNIGLACVTALAEAGARVIIADLDEAMATKAVED----LR-MEGHDVSSVVMDVTNTESVQNAVR   82 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986543321100    00 012345666666   677777665


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                     |+.++.++++++.    +.+.++||++||...+.....   
T Consensus        83 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---  159 (260)
T 3awd_A           83 SVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP---  159 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC---
Confidence            2     148999999982                     3445666666554    346789999999876543211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                            .+ ...|+++|...+            .+++++++|||.++++..+
T Consensus       160 ------~~-~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          160 ------QQ-QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             ------SC-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             ------CC-ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence                  11 156887775433            3789999999999999764

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.68  E-value=4.9e-17  Score=137.34  Aligned_cols=147  Identities=18%  Similarity=0.190  Sum_probs=103.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|.. +..+.+.+.    +. .....+..+.+|   .+++.+++
T Consensus         3 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~d~~~v~~~~   73 (246)
T 3osu_A            3 MTKSALVT----GASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEE----IK-AKGVDSFAIQANVADADEVKAMI   73 (246)
T ss_dssp             CSCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHH
Confidence            45899999    9999999999999999999999998864 322221100    00 012345556665   67777666


Q ss_pred             cCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+.....   
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  150 (246)
T 3osu_A           74 KEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG---  150 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC---
Confidence            531     5899999999                    2566666777666    5567789999999876644322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                               ...|+++|...+            .++++++++||.++++..+.
T Consensus       151 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (246)
T 3osu_A          151 ---------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA  194 (246)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC
T ss_pred             ---------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc
Confidence                     267888885332            26999999999999987543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.68  E-value=1.1e-16  Score=135.88  Aligned_cols=151  Identities=16%  Similarity=0.067  Sum_probs=100.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcc--cchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF--NEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~--~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.-...-  ......++.++.+|   .+++.++
T Consensus         6 ~~k~vlIT----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   81 (264)
T 2pd6_A            6 RSALALVT----GAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCL   81 (264)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHH
Confidence            45799999    999999999999999999999999998754432211000000  00001345666666   6666666


Q ss_pred             hcCC-----cc-cEEEeCCCc--------------------CHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCC
Q 025587          148 VGGV-----TF-DVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~~-----~~-d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~  196 (250)
                      ++..     ++ |+|||+||.                    |+.++.++++++.+    .+ .++||++||...+.... 
T Consensus        82 ~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  160 (264)
T 2pd6_A           82 LEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV-  160 (264)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT-
T ss_pred             HHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC-
Confidence            6542     35 999999982                    45566677766554    34 57999999986554321 


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ....|+.+|...+            .+++++++|||.++++...
T Consensus       161 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  204 (264)
T 2pd6_A          161 -----------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ  204 (264)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred             -----------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence                       1266887775332            3799999999999999754

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.68  E-value=5.2e-17  Score=136.50  Aligned_cols=147  Identities=15%  Similarity=0.111  Sum_probs=101.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.......+..+.+|   ++++.++++
T Consensus         6 ~~~~vlVt----GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            6 QGKVSLVT----GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEE----IANKYGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH----HHhhcCCceEEEEccCCCHHHHHHHHH
Confidence            45789999    9999999999999999999999999986543321100    000012345566665   677777765


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+.....    
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  153 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG----  153 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC----
Confidence            2     148999999982                    34455    44555555667889999999765433211    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+.+|...+            .+++++++|||.++++...
T Consensus       154 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  196 (248)
T 2pnf_A          154 --------QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA  196 (248)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh
Confidence                    256777774332            2689999999999998643

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=1.9e-16  Score=133.60  Aligned_cols=140  Identities=12%  Similarity=0.084  Sum_probs=100.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+. .       +  .++.++.+|   ++++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~-------~--~~~~~~~~D~~~~~~~~~~~~   70 (246)
T 2ag5_A            5 DGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELE-K-------Y--PGIQTRVLDVTKKKQIDQFAN   70 (246)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-G-------S--TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h-------c--cCceEEEeeCCCHHHHHHHHH
Confidence            45899999    99999999999999999999999999875544322 1       0  144555565   667766654


Q ss_pred             C-CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          150 G-VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       150 ~-~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      . .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+.....        
T Consensus        71 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  142 (246)
T 2ag5_A           71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV--------  142 (246)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT--------
T ss_pred             HhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC--------
Confidence            2 258999999992                    34455555554    44556789999999876543210        


Q ss_pred             CCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          205 VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                         ....|+++|...+            .+++++++|||.++++.
T Consensus       143 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  184 (246)
T 2ag5_A          143 ---NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (246)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence               1256888774432            27999999999999985

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.67  E-value=2.1e-16  Score=133.86  Aligned_cols=138  Identities=20%  Similarity=0.171  Sum_probs=100.0

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVG  149 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~  149 (250)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+             ..+.++ +| .+++.++++
T Consensus        16 ~~~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-------------~~~~~~-~D~~~~~~~~~~   77 (249)
T 1o5i_A           16 GIRDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------------GHRYVV-CDLRKDLDLLFE   77 (249)
T ss_dssp             CCTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------------CSEEEE-CCTTTCHHHHHH
T ss_pred             ccCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-------------CCeEEE-eeHHHHHHHHHH
Confidence            3456899999    9999999999999999999999999986332211             123344 66 344555544


Q ss_pred             CC-cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          150 GV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      .. ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...|.+...        
T Consensus        78 ~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  149 (249)
T 1o5i_A           78 KVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN--------  149 (249)
T ss_dssp             HSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred             HhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC--------
Confidence            22 58999999982                    2333    556677777777889999999987754321        


Q ss_pred             CCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          205 VKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                          ...|+.+|...+            .++++++++||.++++..
T Consensus       150 ----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  191 (249)
T 1o5i_A          150 ----LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV  191 (249)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcc
Confidence                256887774332            379999999999999863

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.67  E-value=1.1e-16  Score=138.95  Aligned_cols=146  Identities=20%  Similarity=0.214  Sum_probs=103.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   ++++.++++
T Consensus        40 ~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           40 SARSVLVT----GGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE----LGELGAGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----HTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987655432111    000011345566666   666666654


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccc-cCCCCCCc
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIY-KPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy-~~~~~~~~  199 (250)
                      ..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+ ...     
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~-----  186 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGY-----  186 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCC-----
Confidence            31     5899999999                    2456666666665    45677899999997643 111     


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             +....|+++|...+            .++++++|+||.|+++..
T Consensus       187 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  230 (293)
T 3rih_A          187 -------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGL  230 (293)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcch
Confidence                   11367888884333            379999999999999753

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.67  E-value=2.6e-16  Score=133.80  Aligned_cols=145  Identities=15%  Similarity=0.158  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+.++.+|   ++++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~   75 (257)
T 3imf_A            5 KEKVVIIT----GGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLE----IE-QFPGQILTVQMDVRNTDDIQKMIE   75 (257)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HC-CSTTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987654432110    00 012245566666   667776665


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHhHHHHHHHH-----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWA-----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~-----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||                    +|+.++.++.+++     ++.+.++||++||...+.....   
T Consensus        76 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  152 (257)
T 3imf_A           76 QIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG---  152 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC---
Confidence            31     5899999999                    2556666666665     3445789999999876644322   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------H-HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------S-ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~-e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+++|..            . ..++++++|+||.|.++..
T Consensus       153 ---------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~  195 (257)
T 3imf_A          153 ---------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG  195 (257)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence                     2568877732            1 3479999999999998854

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.67  E-value=1.1e-16  Score=136.59  Aligned_cols=146  Identities=20%  Similarity=0.203  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+..+.+|   ++++.++++
T Consensus         9 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~~~~~v~~~~~   80 (262)
T 3pk0_A            9 QGRSVVVT----GGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD----LDQLGSGKVIGVQTDVSDRAQCDALAG   80 (262)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTSSSCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhCCCcEEEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    000111345566666   666766664


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccc-cCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIY-KPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy-~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+ ...     
T Consensus        81 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  155 (262)
T 3pk0_A           81 RAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGY-----  155 (262)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCC-----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC-----
Confidence            21     48999999992                    455555555554    44477899999997643 211     


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             +....|+++|...+            .++++++++||.++++..
T Consensus       156 -------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  199 (262)
T 3pk0_A          156 -------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGL  199 (262)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH
T ss_pred             -------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccc
Confidence                   11367888884433            379999999999999853

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.67  E-value=2.3e-16  Score=133.82  Aligned_cols=140  Identities=17%  Similarity=0.184  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+  +...       .++.  ...+.++.+|   ++++.++
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~-------~~l~~~~~~~~~~~~D~~~~~~v~~~   69 (255)
T 2q2v_A            3 KGKTALVT----GSTSGIGLGIAQVLARAGANIVLNGFGDP--APAL-------AEIARHGVKAVHHPADLSDVAQIEAL   69 (255)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHH-------HHHHTTSCCEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHH-------HHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35799999    99999999999999999999999999865  1100       0111  1234555555   7777777


Q ss_pred             hcCC-----cccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++..     ++|+|||+||.                    |+.    .++.+++.+++.+.++||++||...+.....  
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  147 (255)
T 2q2v_A           70 FALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG--  147 (255)
T ss_dssp             HHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC--
Confidence            6521     48999999982                    223    4566777777778889999999876654221  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                ...|+.+|...+            .++++++|+||.++++.
T Consensus       148 ----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (255)
T 2q2v_A          148 ----------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL  188 (255)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred             ----------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence                      256887774332            26899999999999875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.67  E-value=2e-16  Score=133.84  Aligned_cols=147  Identities=16%  Similarity=0.068  Sum_probs=96.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC--
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV--  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~--  151 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+.               .+..+..|.+++.++++..  
T Consensus         1 mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~Dl~~~~~v~~~~~~~~~   61 (257)
T 1fjh_A            1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------DLSTAEGRKQAIADVLAKCSK   61 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHTTCTT
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------ccccCCCCHHHHHHHHHHhCC
Confidence            3689999    999999999999999999999999998754331               1222233577888887653  


Q ss_pred             cccEEEeCCCc-------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccC-----CC------
Q 025587          152 TFDVVLDNNGK-------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE-----GD------  203 (250)
Q Consensus       152 ~~d~Vi~~ag~-------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e-----~~------  203 (250)
                      ++|+|||+||.             |+.++.++++++    ++.+.++||++||...+......+..+     .+      
T Consensus        62 ~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (257)
T 1fjh_A           62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             CCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhh
Confidence            58999999994             345555555555    456678999999998873211100000     00      


Q ss_pred             -----CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          204 -----VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       204 -----~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                           ...+....|+.+|...+            .++++++|+||.+.++...
T Consensus       142 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  194 (257)
T 1fjh_A          142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ  194 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------
T ss_pred             hhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccch
Confidence                 11112356888874433            2699999999999998644

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.67  E-value=1.9e-16  Score=136.27  Aligned_cols=151  Identities=15%  Similarity=0.077  Sum_probs=103.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC-CCCCCCccc----ch--hcCCceEEeCC---HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFN----EI--VSAGGKTVWGD---PA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~~~----~~--~~~~v~~v~~D---~~  142 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+++..... .......+.    .+  ....+..+.+|   ++
T Consensus         9 ~~k~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            9 EGKTALIT----GGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            46899999    9999999999999999999999999975321100 000000000    01  12345566666   66


Q ss_pred             HHHhhhcCC-----cccEEEeCCC--------------------cCHHhHHHHHHH----HHhCCCCEEEEEcCcccccC
Q 025587          143 EVGNVVGGV-----TFDVVLDNNG--------------------KNLDAVRPVADW----AKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       143 ~l~~~l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ++.++++..     ++|++||+||                    +|+.++.+++++    +++.+.++||++||...+..
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence            777766521     5899999999                    245566666665    45556789999999877654


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|+++|...+            .++++++++||.|+++...
T Consensus       165 ~~~------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  210 (281)
T 3s55_A          165 NFA------------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH  210 (281)
T ss_dssp             CTT------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred             CCC------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence            322            267888884332            2699999999999999765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.66  E-value=4e-16  Score=133.11  Aligned_cols=140  Identities=20%  Similarity=0.218  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....          .+...++.++.+|   ++++.++++
T Consensus        26 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (260)
T 3gem_A           26 SSAPILIT----GASQRVGLHCALRLLEHGHRVIISYRTEHASVT----------ELRQAGAVALYGDFSCETGIMAFID   91 (260)
T ss_dssp             -CCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESSCCHHHH----------HHHHHTCEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH----------HHHhcCCeEEECCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754321          1222345666666   666666664


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     .++|+|||+||.                   |+.++.+++++    +++.+.++||++||...+.....     
T Consensus        92 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-----  166 (260)
T 3gem_A           92 LLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK-----  166 (260)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS-----
T ss_pred             HHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC-----
Confidence            2     258999999992                   44555555444    45567789999999876654322     


Q ss_pred             CCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+++|...+.           ++++++++||.+.++..
T Consensus       167 -------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~  207 (260)
T 3gem_A          167 -------HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPK  207 (260)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---
T ss_pred             -------cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCC
Confidence                   2679888854332           48999999999988754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.66  E-value=1.5e-16  Score=135.20  Aligned_cols=145  Identities=19%  Similarity=0.207  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+..+.+|   .+++.++++
T Consensus        13 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~~   83 (260)
T 2zat_A           13 ENKVALVT----ASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVAT----LQ-GEGLSVTGTVCHVGKAEDRERLVA   83 (260)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999987544321100    00 012234555565   666666665


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHH----HHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll----~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                     |+.++.+++    +.+++.+.++||++||...|.+...   
T Consensus        84 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  160 (260)
T 2zat_A           84 MAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPN---  160 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCC---
Confidence            2     148999999983                     344444444    4455667889999999887754221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+++|...+            .++++++++||.+.++..
T Consensus       161 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  202 (260)
T 2zat_A          161 ---------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFS  202 (260)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTT
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccc
Confidence                     266887774332            269999999999998864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.66  E-value=2e-16  Score=134.19  Aligned_cols=145  Identities=19%  Similarity=0.160  Sum_probs=98.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus         6 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~   76 (261)
T 1gee_A            6 EGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEE----IK-KVGGEAIAVKGDVTVESDVINLV   76 (261)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHH
Confidence            45899999    99999999999999999999999999 54333221100    00 012235566666   66666666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHH----HHHHhCC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll----~~~~~~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     ++|+|||+||.                    |+.++.+++    +.+++.+ .++||++||...+.+..   
T Consensus        77 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  153 (261)
T 1gee_A           77 QSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP---  153 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC---
Confidence            521     48999999982                    344444444    4444555 67999999987654321   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ....|+.+|...+            .+++++++|||.++++..
T Consensus       154 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  196 (261)
T 1gee_A          154 ---------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh
Confidence                     1367888883322            279999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.66  E-value=9.6e-17  Score=136.11  Aligned_cols=140  Identities=21%  Similarity=0.306  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+       + ....+.++.+|   ++++.++++
T Consensus         5 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-------~-~~~~~~~~~~D~~~~~~v~~~~~   72 (253)
T 1hxh_A            5 QGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA-------E-LGERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------H-HCTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------H-cCCceEEEEccCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999998654432211       0 12345555565   666666664


Q ss_pred             CC-----cccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|+|||+||.                    |+.    .++.+++.+++.+ ++||++||...+.+...    
T Consensus        73 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~----  147 (253)
T 1hxh_A           73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCC----
Confidence            31     48999999993                    222    4556677777777 89999999887654221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------h--CCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------N--FSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~--~~~~~ilRp~~i~G~~  237 (250)
                              ...|+++|...+            .  +++++++|||.++++.
T Consensus       148 --------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          148 --------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             --------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence                    256887773322            3  7999999999999985

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.66  E-value=5.9e-17  Score=135.94  Aligned_cols=144  Identities=16%  Similarity=0.121  Sum_probs=98.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceE-EeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+|+||++++++|+++|++|+++ +|+.+..+.+.+.    +. .....+.. +.+|   .+++.+++
T Consensus         1 ~k~vlIT----GasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            1 MRKALIT----GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEE----AR-RRGSPLVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHH----HH-HTTCSCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCceEEEEeccCCCHHHHHHHH
Confidence            3689999    999999999999999999999998 7765443321100    00 01123344 5555   66666665


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....    
T Consensus        72 ~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  147 (245)
T 2ph3_A           72 HQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----  147 (245)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC----
Confidence            42     148999999982                    3444    66666777777788999999986543321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|+.+|...+            .+++++++|||.++++..
T Consensus       148 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  190 (245)
T 2ph3_A          148 --------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMT  190 (245)
T ss_dssp             --------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcch
Confidence                    1256887774322            268999999999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.66  E-value=1.2e-16  Score=137.73  Aligned_cols=148  Identities=19%  Similarity=0.190  Sum_probs=100.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. +..+.+.+.    +.......+.++.+|   .+++.++
T Consensus        23 l~~k~~lVT----Gas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           23 MMTKTAVIT----GSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDE----VAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHH----HHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH----HhhccCCcEEEEeCCCCCHHHHHHH
Confidence            346899999    9999999999999999999999999954 322221100    000112345566665   6777766


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++.     .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....  
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  172 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF--  172 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--
Confidence            652     158999999992                    455666665554    5567789999999876644322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                ...|+++|...+            .++++++++||.++++...
T Consensus       173 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  215 (281)
T 3v2h_A          173 ----------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVE  215 (281)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchh
Confidence                      267888885333            2699999999999998643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.66  E-value=1.6e-16  Score=137.68  Aligned_cols=145  Identities=17%  Similarity=0.108  Sum_probs=100.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   .+++.++++
T Consensus        25 ~~k~vlIT----GasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~~~~~~~~~~~   96 (302)
T 1w6u_A           25 QGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ----ISSQTGNKVHAIQCDVRDPDMVQNTVS   96 (302)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCceEEEEeCCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999987543321100    000013346666676   666766665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHHH-----hCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~-----~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                    |+.++.++++++.     +.+.++||++||...+.....   
T Consensus        97 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---  173 (302)
T 1w6u_A           97 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF---  173 (302)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC---
Confidence            32     58999999982                    4556666655553     235679999999877654221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .+++++++|||.+++++
T Consensus       174 ---------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  214 (302)
T 1w6u_A          174 ---------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  214 (302)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ---------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence                     256887774433            36899999999999983

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.66  E-value=4.2e-16  Score=132.35  Aligned_cols=143  Identities=14%  Similarity=0.108  Sum_probs=101.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+.++.+|   ++++.++++
T Consensus        11 ~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~   78 (265)
T 2o23_A           11 KGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK--------KLGNNCVFAPADVTSEKDVQTALA   78 (265)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH--------HHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH--------HhCCceEEEEcCCCCHHHHHHHHH
Confidence            45899999    999999999999999999999999998765442211        112345666666   677777765


Q ss_pred             CC-----cccEEEeCCCc--------------------------CHHhHHHHHHHHHh----C------CCCEEEEEcCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------------NLDAVRPVADWAKS----S------GVKQFLFISSA  188 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------------~~~~~~~ll~~~~~----~------~~~~~v~iSS~  188 (250)
                      ..     ++|+|||+||.                          |+.++.++++++.+    .      +.++||++||.
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~  158 (265)
T 2o23_A           79 LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV  158 (265)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT
T ss_pred             HHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCCh
Confidence            21     48999999983                          23455566666554    3      67899999998


Q ss_pred             ccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ..+.....            ...|+.+|...+            .++++++++||.+.++...
T Consensus       159 ~~~~~~~~------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  209 (265)
T 2o23_A          159 AAFEGQVG------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT  209 (265)
T ss_dssp             HHHHCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred             hhcCCCCC------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccc
Confidence            87754321            266888875332            2699999999999988643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.66  E-value=1.4e-16  Score=137.21  Aligned_cols=142  Identities=14%  Similarity=0.153  Sum_probs=102.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   .+++.+++
T Consensus        25 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           25 LNQRVCIVT----GGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN--------EIGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------HHCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceEEEEecCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998755443211        112345555555   67777666


Q ss_pred             cCC-----cccEEEeCCC--------------------cCHHhHHHHHH----HHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG--------------------KNLDAVRPVAD----WAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~----~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||                    +|+.++.++++    .+++.+.++||++||...+.....   
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  169 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD---  169 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC---
Confidence            531     5899999999                    24555554444    445566779999999887654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+.            ++++++++||.+.++.
T Consensus       170 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  210 (277)
T 4dqx_A          170 ---------RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY  210 (277)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence                     3678888844332            6999999999998875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.66  E-value=1.1e-16  Score=135.23  Aligned_cols=146  Identities=16%  Similarity=0.220  Sum_probs=101.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+.+.+.    +. .....+..+.+|   ++++.+++
T Consensus         3 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   73 (246)
T 2uvd_A            3 KGKVALVT----GASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDE----IK-KLGSDAIAVRADVANAEDVTNMV   73 (246)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999    99999999999999999999999999 54333221100    00 012245556666   67777766


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....    
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  149 (246)
T 2uvd_A           74 KQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP----  149 (246)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC----
Confidence            52     148999999992                    3444    55556666666778999999987654321    


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                              ....|+++|...            ..++++++++||.+.++...
T Consensus       150 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (246)
T 2uvd_A          150 --------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTD  193 (246)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSS
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchh
Confidence                    125688777432            23799999999999988643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.66  E-value=3.9e-17  Score=133.64  Aligned_cols=135  Identities=16%  Similarity=0.133  Sum_probs=100.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG-  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~-  150 (250)
                      |+||||    ||+|+||++++++|+++  +|++++|+.+..+.+.+       ++.  . +++.+   |++++.++++. 
T Consensus         1 k~vlVt----Gasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~-------~~~--~-~~~~~D~~~~~~~~~~~~~~   64 (207)
T 2yut_A            1 MRVLIT----GATGGLGGAFARALKGH--DLLLSGRRAGALAELAR-------EVG--A-RALPADLADELEAKALLEEA   64 (207)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHH-------HHT--C-EECCCCTTSHHHHHHHHHHH
T ss_pred             CEEEEE----cCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHH-------hcc--C-cEEEeeCCCHHHHHHHHHhc
Confidence            579999    99999999999999998  99999998654432210       010  1 34444   47888888761 


Q ss_pred             CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCC
Q 025587          151 VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAG  210 (250)
Q Consensus       151 ~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~  210 (250)
                      .++|+|||+||                    .|+.++.++++++++.+.++||++||...|.+...            ..
T Consensus        65 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~------------~~  132 (207)
T 2yut_A           65 GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPG------------FA  132 (207)
T ss_dssp             CSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTT------------BH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC------------cc
Confidence            13899999998                    25678888999987777789999999988754321            26


Q ss_pred             hhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          211 HVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       211 ~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      .|+..|...+            .+++++++|||.++++.
T Consensus       133 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~  171 (207)
T 2yut_A          133 AYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL  171 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence            6887774332            37999999999999985

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.66  E-value=1.9e-16  Score=135.16  Aligned_cols=145  Identities=21%  Similarity=0.191  Sum_probs=101.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +... ...++..+.+|   ++++.+++
T Consensus        12 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~   83 (267)
T 1iy8_A           12 TDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA----VLETAPDAEVLTTVADVSDEAQVEAYV   83 (267)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            45899999    9999999999999999999999999987544322110    0000 02345566666   67777766


Q ss_pred             cCC-----cccEEEeCCCc---------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~---------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     ++|+|||+||.                     |+.    .++.+++.+++.+.++||++||...+....   
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  160 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG---  160 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCC---
Confidence            531     48999999983                     122    244666777776788999999987654321   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ....|+++|...+            .++++++|+||.++++.
T Consensus       161 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          161 ---------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             ---------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence                     1266887774332            37999999999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.66  E-value=3.3e-16  Score=134.02  Aligned_cols=146  Identities=18%  Similarity=0.162  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+..+.+|   ++++.++++
T Consensus        20 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           20 RGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK----LTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999986544321100    000012344555565   667766665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHH----HHHhCCCCEEEEEcCcc-cccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVAD----WAKSSGVKQFLFISSAG-IYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~----~~~~~~~~~~v~iSS~~-vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                    |+.++.++++    .+++.+.++||++||.. .+...     
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  166 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-----  166 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCC-----
Confidence            2     148999999982                    3445555544    44556778999999976 32211     


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             +....|+++|...+            .++++++|+||.+.++..
T Consensus       167 -------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  210 (267)
T 1vl8_A          167 -------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  210 (267)
T ss_dssp             -------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc
Confidence                   11256887774433            279999999999988864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.66  E-value=3.9e-16  Score=131.49  Aligned_cols=144  Identities=19%  Similarity=0.212  Sum_probs=102.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.  ....+.++.+|   ++++.++++
T Consensus         5 ~~k~vlVt----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~   74 (251)
T 1zk4_A            5 DGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS----VG--TPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HC--CTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hh--ccCceEEEECCCCCHHHHHHHHH
Confidence            45799999    9999999999999999999999999986543321100    00  00345666666   666776665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCC-CEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                    |+.    .++.+++.+++.+. ++||++||...+.....   
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---  151 (251)
T 1zk4_A           75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS---  151 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC---
Confidence            3     148999999982                    233    34556677777776 79999999887654321   


Q ss_pred             cCCCCCCCCCChhHHHHHHH--------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS--------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~--------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+.+|...              +.+++++++|||.++++..
T Consensus       152 ---------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~  195 (251)
T 1zk4_A          152 ---------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV  195 (251)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred             ---------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhh
Confidence                     25688777433              2368999999999999853

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.66  E-value=1.4e-15  Score=129.87  Aligned_cols=133  Identities=19%  Similarity=0.168  Sum_probs=97.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.                ..++..+.+|   ++++.++++
T Consensus         7 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~   66 (264)
T 2dtx_A            7 RDKVVIVT----GASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASID   66 (264)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998643                1134445555   677776665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+....     
T Consensus        67 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  141 (264)
T 2dtx_A           67 HIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK-----  141 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-----
Confidence            2     148999999982                    44554444444    4455678999999988765421     


Q ss_pred             CCCCCCCCCChhHHHHHHHHh---------C--CcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN---------F--SNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~---------~--~~~~ilRp~~i~G~~  237 (250)
                             ....|+++|...+.         .  +++++|+||.+.++.
T Consensus       142 -------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~  182 (264)
T 2dtx_A          142 -------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPL  182 (264)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc
Confidence                   13678888754332         2  899999999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.66  E-value=1.4e-16  Score=136.94  Aligned_cols=144  Identities=20%  Similarity=0.213  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus        21 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~~~~~v~~~~~   91 (277)
T 2rhc_B           21 DSEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE----LR-EAGVEADGRTCDVRSVPEIEALVA   91 (277)
T ss_dssp             TSCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544321100    00 012235556666   666666665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHhC------CCCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKSS------GVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~------~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     .++|+|||+||.                    |+.++.++++++.+.      +.++||++||...+....   
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  168 (277)
T 2rhc_B           92 AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV---  168 (277)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC---
Confidence            2     148999999982                    456677777775543      568999999987553321   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ....|+++|...+.            ++++++|+||.++++.
T Consensus       169 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          169 ---------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             ---------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence                     12668888753322            5899999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.66  E-value=1.8e-16  Score=136.48  Aligned_cols=142  Identities=17%  Similarity=0.172  Sum_probs=102.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        .....+..+.+|   ++++.+++
T Consensus        27 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~   94 (277)
T 3gvc_A           27 LAGKVAIVT----GAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT--------KIGCGAAACRVDVSDEQQIIAMV   94 (277)
T ss_dssp             CTTCEEEET----TTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------HHCSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HcCCcceEEEecCCCHHHHHHHH
Confidence            456899999    999999999999999999999999998755443211        113345566665   66666666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+.....   
T Consensus        95 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~---  171 (277)
T 3gvc_A           95 DACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG---  171 (277)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---
Confidence            431     58999999992                    45555555544    45566789999999876543221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .++++++|+||.++++.
T Consensus       172 ---------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  212 (277)
T 3gvc_A          172 ---------TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM  212 (277)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence                     367888884333            36999999999999885

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.66  E-value=2.4e-16  Score=135.67  Aligned_cols=147  Identities=20%  Similarity=0.197  Sum_probs=103.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +....  ...+.++.+|   ++++.+
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (281)
T 3svt_A            9 FQDRTYLVT----GGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQE----LEALGANGGAIRYEPTDITNEDETAR   80 (281)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTCCSSCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhCCCCceEEEEeCCCCCHHHHHH
Confidence            346899999    9999999999999999999999999987554322110    00000  1145566666   666766


Q ss_pred             hhcCC-----cccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCC
Q 025587          147 VVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       147 ~l~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                      +++..     ++|+|||+||.                     |+.++.++++++    ++.+.++||++||...+.....
T Consensus        81 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  160 (281)
T 3svt_A           81 AVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW  160 (281)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC
Confidence            66532     58999999993                     455666666554    4455679999999887754322


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                                  ...|+++|...+.            ++++++++||.++++..
T Consensus       161 ------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  202 (281)
T 3svt_A          161 ------------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLV  202 (281)
T ss_dssp             ------------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             ------------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence                        2678888854433            59999999999999864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.66  E-value=3.6e-16  Score=132.36  Aligned_cols=139  Identities=15%  Similarity=0.147  Sum_probs=97.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   ++++.++++..
T Consensus         1 k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~   68 (248)
T 3asu_A            1 MIVLVT----GATAGFGECITRRFIQQGHKVIATGRRQERLQELKD--------ELGDNLYIAQLDVRNRAAIEEMLASL   68 (248)
T ss_dssp             CEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHCTTEEEEECCTTCHHHHHHHHHTS
T ss_pred             CEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcCceEEEEcCCCCHHHHHHHHHHH
Confidence            579999    999999999999999999999999998754432211        111245556665   77777777532


Q ss_pred             -----cccEEEeCCCc---------------------CHHhHHHH----HHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          152 -----TFDVVLDNNGK---------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       152 -----~~d~Vi~~ag~---------------------~~~~~~~l----l~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           ++|+|||+||.                     |+.++.++    ++.+++.+.++||++||...+.+..      
T Consensus        69 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------  142 (248)
T 3asu_A           69 PAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA------  142 (248)
T ss_dssp             CTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT------
T ss_pred             HHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC------
Confidence                 58999999983                     33344444    4444455678999999987654321      


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeee-cCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMI-GSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~-G~~  237 (250)
                            ....|+++|...+.            ++++++++||.+. .+.
T Consensus       143 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~  185 (248)
T 3asu_A          143 ------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC---
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcc
Confidence                  12678888743332            6999999999999 464

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.66  E-value=1.9e-16  Score=134.66  Aligned_cols=146  Identities=18%  Similarity=0.171  Sum_probs=98.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+. .+.+.+.    +.......+..+.+|   ++++.++++
T Consensus         4 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~   75 (260)
T 1x1t_A            4 GKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAG----LAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             TCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHH----HHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHH----HHhccCCcEEEEECCCCCHHHHHHHHH
Confidence            5799999    999999999999999999999999998754 3321100    000002345555566   667776665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHH----HHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVA----DWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll----~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.+++    +.+++.+.++||++||...+.....    
T Consensus        76 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  151 (260)
T 1x1t_A           76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN----  151 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC----
Confidence            2     148999999982                    344444444    4445556789999999876643211    


Q ss_pred             CCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+++|...+.            ++++++++||.+.++...
T Consensus       152 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  194 (260)
T 1x1t_A          152 --------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVE  194 (260)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHH
Confidence                    2668887743322            689999999999998643

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=1.5e-16  Score=138.07  Aligned_cols=148  Identities=18%  Similarity=0.112  Sum_probs=100.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.-...........+.++.+|   .+++.++++
T Consensus        17 ~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           17 QGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            45899999    99999999999999999999999999865433211000000000012345666666   667777665


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||                    +|+.++.++++++..    .+.++||++||.. +....     
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~-----  166 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP-----  166 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC-----
Confidence            3     14899999998                    256677788877654    2357899999987 32211     


Q ss_pred             CCCCCCCCCChhHHHHHH--------HH----hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYI--------SE----NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~--------~e----~~~~~~ilRp~~i~G~~  237 (250)
                             ....|++.|..        ++    .+++++++|||.++|+.
T Consensus       167 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          167 -------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             -------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence                   12457666532        22    27999999999999994

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.65  E-value=2.8e-16  Score=133.38  Aligned_cols=147  Identities=14%  Similarity=0.061  Sum_probs=96.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   .+++.++++
T Consensus         6 ~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            6 RNATVAVI----GAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE----IE-AAGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             CSCEEEEE----CCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----HH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEECcCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987665432211    00 012345566666   677776665


Q ss_pred             C----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .    .++|++||+||.                    |+.++..    +++.+++.+.++||++||...+.....     
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  151 (252)
T 3h7a_A           77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG-----  151 (252)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT-----
T ss_pred             HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC-----
Confidence            3    258999999992                    3444444    444556666789999999876543221     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcE-EEEecCeeecCCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNW-ASFRPQYMIGSGNNK  240 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~-~ilRp~~i~G~~~~~  240 (250)
                             ...|+++|...+            .++++ ++++||.+.++....
T Consensus       152 -------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~  196 (252)
T 3h7a_A          152 -------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE  196 (252)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc
Confidence                   367888884433            26889 899999999886543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.65  E-value=3.1e-16  Score=132.56  Aligned_cols=136  Identities=21%  Similarity=0.259  Sum_probs=96.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG--  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~--  150 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+           .  ++..+..|++++.++++.  
T Consensus        14 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~--~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           14 VSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------F--GVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------E--EEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------c--CeeccCCCHHHHHHHHHHHH
Confidence            45899999    9999999999999999999999999987544321           1  133344467777776653  


Q ss_pred             ---CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          151 ---VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       151 ---~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                         .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+....        
T Consensus        77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  148 (247)
T 1uzm_A           77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG--------  148 (247)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC--------
Confidence               148999999983                    34455455544    4456778999999986543221        


Q ss_pred             CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                          ....|+.+|...+            .++++++++||.+.++.
T Consensus       149 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  190 (247)
T 1uzm_A          149 ----NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  190 (247)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ----CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence                1256887774322            37999999999998764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.65  E-value=1.8e-16  Score=135.19  Aligned_cols=143  Identities=20%  Similarity=0.171  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus        20 ~~k~vlIt----GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~----l~-~~~~~~~~~~~D~~~~~~~~~~~   90 (274)
T 1ja9_A           20 AGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAE----LK-KLGAQGVAIQADISKPSEVVALF   90 (274)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHHH
Confidence            45799999    99999999999999999999999999 43332211100    00 012345566666   67777776


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHHHHhC---CCCEEEEEcCcccc-cCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIY-KPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy-~~~~~~~~  199 (250)
                      +..     .+|+|||+||.                    |+.++.++++++.+.   + ++||++||...| ....    
T Consensus        91 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~----  165 (274)
T 1ja9_A           91 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP----  165 (274)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC----
Confidence            521     48999999982                    466777887777653   4 799999998876 3321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                              ....|+.+|...+.            +++++++|||.++++.
T Consensus       166 --------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  207 (274)
T 1ja9_A          166 --------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  207 (274)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence                    12568877754432            6999999999998875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.65  E-value=1.1e-16  Score=137.14  Aligned_cols=142  Identities=13%  Similarity=0.100  Sum_probs=100.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+.++.+|   ++++.+++
T Consensus        25 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~   92 (266)
T 3grp_A           25 LTGRKALVT----GATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA--------DLGKDVFVFSANLSDRKSIKQLA   92 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHCSSEEEEECCTTSHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceEEEEeecCCHHHHHHHH
Confidence            346899999    999999999999999999999999998755443211        123345666666   66776666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+....    
T Consensus        93 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~----  168 (266)
T 3grp_A           93 EVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP----  168 (266)
T ss_dssp             HHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC----
Confidence            52     158999999992                    4445    55566666666778999999976554321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ....|+++|...+            .++++++++||.+.++.
T Consensus       169 --------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~  210 (266)
T 3grp_A          169 --------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM  210 (266)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence                    1366888885322            26999999999998875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.65  E-value=1.8e-16  Score=134.62  Aligned_cols=144  Identities=20%  Similarity=0.188  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         1 m~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~v~~~~~   71 (256)
T 1geg_A            1 MKKVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE----IN-QAGGHAVAVKVDVSDRDQVFAAVE   71 (256)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHHHH
Confidence            35789999    9999999999999999999999999987544322100    00 012235556666   677777665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                    |+.++    +.+++.+++.+ .++||++||...+....    
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  147 (256)
T 1geg_A           72 QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----  147 (256)
T ss_dssp             HHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----
Confidence            2     148999999982                    33344    34445555555 67999999986553321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ....|+++|...+            .++++++|+||.+.++.
T Consensus       148 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  189 (256)
T 1geg_A          148 --------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM  189 (256)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence                    1256887774332            36999999999998874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.65  E-value=3.7e-16  Score=134.00  Aligned_cols=145  Identities=20%  Similarity=0.209  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCccc--chhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN--EIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.  ......+..+.+|   ++++.++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (278)
T 1spx_A            5 AEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQ----ILAAGVSEQNVNSVVADVTTDAGQDEI   76 (278)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhcccCCCceeEEecccCCHHHHHHH
Confidence            45799999    9999999999999999999999999987544322110    00  0011235556666   6777776


Q ss_pred             hcCC-----cccEEEeCCCc------------------------CHHhHHHHHHHH----HhCCCCEEEEEcCccc-ccC
Q 025587          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGI-YKP  193 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~------------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~v-y~~  193 (250)
                      ++..     ++|+|||+||.                        |+.++.++++++    ++.+ ++||++||... +..
T Consensus        77 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~  155 (278)
T 1spx_A           77 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA  155 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC
Confidence            6521     48999999983                        223344444444    3346 89999999876 443


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ..            ....|+.+|...+            .++++++||||.++++..
T Consensus       156 ~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  200 (278)
T 1spx_A          156 TP------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG  200 (278)
T ss_dssp             CT------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred             CC------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccc
Confidence            21            1256887774332            379999999999999864

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.65  E-value=1.1e-16  Score=135.29  Aligned_cols=148  Identities=19%  Similarity=0.210  Sum_probs=88.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   ++++.++++
T Consensus         8 ~~k~vlIT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T 3qiv_A            8 ENKVGIVT----GSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQ----IV-ADGGTAISVAVDVSDPESAKAMAD   78 (253)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432111    00 012335566666   666766665


Q ss_pred             CC-----cccEEEeCCCc-----------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCC
Q 025587          150 GV-----TFDVVLDNNGK-----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~-----------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ..     ++|+|||+||.                       |+.+    ++.+++.+++.+.++||++||...|....  
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  156 (253)
T 3qiv_A           79 RTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN--  156 (253)
T ss_dssp             HHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCc--
Confidence            21     58999999983                       3444    55666666666778999999988762210  


Q ss_pred             CccCCCCCCCCCChhHHHHH---H-HH---hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKY---I-SE---NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~---~-~e---~~~~~~ilRp~~i~G~~~~  239 (250)
                              .+..+|.+.+.+   + .|   .++++++++||.++++...
T Consensus       157 --------~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  197 (253)
T 3qiv_A          157 --------YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANR  197 (253)
T ss_dssp             -----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------
T ss_pred             --------hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchh
Confidence                    011233332221   1 22   2689999999999998654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.65  E-value=1e-16  Score=134.58  Aligned_cols=144  Identities=20%  Similarity=0.163  Sum_probs=99.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+|+||++++++|+++|++|+++ .|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         1 ~k~vlVT----GasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   71 (244)
T 1edo_A            1 SPVVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ----IE-AYGGQAITFGGDVSKEADVEAMMK   71 (244)
T ss_dssp             CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HHTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCcEEEEeCCCCCHHHHHHHHH
Confidence            3789999    999999999999999999999995 6765433321100    00 012345566666   677777765


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.++++++.+    .+.++||++||...+.....    
T Consensus        72 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  147 (244)
T 1edo_A           72 TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG----  147 (244)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC----
Confidence            2     148999999982                    45566666655544    46789999999865543211    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...+            .+++++++|||.++++..
T Consensus       148 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  189 (244)
T 1edo_A          148 --------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT  189 (244)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH
T ss_pred             --------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchh
Confidence                    256887775332            268999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.65  E-value=1.9e-16  Score=134.94  Aligned_cols=146  Identities=18%  Similarity=0.155  Sum_probs=101.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++ .|+.+..+...+.    +. .....+..+.+|   ++++.+++
T Consensus         3 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~   73 (258)
T 3oid_A            3 QNKCALVT----GSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEE----IE-KLGVKVLVVKANVGQPAKIKEMF   73 (258)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-TTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHH
Confidence            35799999    999999999999999999999997 6765443322110    00 012345566666   66776666


Q ss_pred             cCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+.....   
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---  150 (258)
T 3oid_A           74 QQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN---  150 (258)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC---
Confidence            532     5899999998                    2455555555544    6667789999999876643222   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+.            +++++.++||.+.++...
T Consensus       151 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  193 (258)
T 3oid_A          151 ---------YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALK  193 (258)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGG
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhh
Confidence                     2678888854332            699999999999988643

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.65  E-value=2.4e-16  Score=138.75  Aligned_cols=145  Identities=20%  Similarity=0.178  Sum_probs=99.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-----ccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-----DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-----~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      +|+||||    ||+|+||++++++|+++|++|++.+|+....     +.+.+     ........+..+.+|   .+++.
T Consensus         5 ~k~vlVT----Gas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~-----~~~~~~~~~~~~~~Dvtd~~~v~   75 (324)
T 3u9l_A            5 KKIILIT----GASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAG-----FARDNDVDLRTLELDVQSQVSVD   75 (324)
T ss_dssp             CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHH-----HHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHH-----HHHhcCCcEEEEEeecCCHHHHH
Confidence            5789999    9999999999999999999999999874211     11100     000112345666666   67777


Q ss_pred             hhhcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCC
Q 025587          146 NVVGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       146 ~~l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++++..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+.....
T Consensus        76 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~  155 (324)
T 3u9l_A           76 RAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP  155 (324)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC
Confidence            766521     5899999999                    2566777776666    6667889999999876643211


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                 ....|+++|...+            .++++++|+||.+.++..
T Consensus       156 -----------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          156 -----------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                       1256888885443            269999999999987653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.65  E-value=2.2e-16  Score=135.97  Aligned_cols=144  Identities=17%  Similarity=0.133  Sum_probs=101.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+..+.+|   .+++.++++
T Consensus        23 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~d~~~v~~~~~   93 (279)
T 3sju_A           23 RPQTAFVT----GVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDG----LR-AAGHDVDGSSCDVTSTDEVHAAVA   93 (279)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-TTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987554422110    00 012345566666   666666664


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHhHHHHHHHHH------hCCCCEEEEEcCcccccCCCCCC
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWAK------SSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~------~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ..     ++|+|||+||                    +|+.++.++++++.      +.+.++||++||...+.....  
T Consensus        94 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--  171 (279)
T 3sju_A           94 AAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY--  171 (279)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--
Confidence            31     5899999999                    25666666666653      356689999999876643222  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+            .++++++|+||.|.++.
T Consensus       172 ----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (279)
T 3sju_A          172 ----------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM  212 (279)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHH
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchH
Confidence                      267888885332            36999999999998874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.65  E-value=7.6e-16  Score=129.10  Aligned_cols=149  Identities=14%  Similarity=0.119  Sum_probs=98.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+|+||++++++|+++|  ++|++++|+.+..+.+.+.        ....+.++.+|   .+++.+++
T Consensus         3 ~k~vlIt----GasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~--------~~~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            3 PGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--------KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc--------cCCceEEEEeecCCHHHHHHHH
Confidence            5789999    999999999999999999  9999999987655433211        12345666666   66676666


Q ss_pred             cCC-------cccEEEeCCCc---------------------CHHhHHHHHHHHHh----C------C-----CCEEEEE
Q 025587          149 GGV-------TFDVVLDNNGK---------------------NLDAVRPVADWAKS----S------G-----VKQFLFI  185 (250)
Q Consensus       149 ~~~-------~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~----~------~-----~~~~v~i  185 (250)
                      +..       ++|+|||+||.                     |+.++.++++++..    .      +     .++||++
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  150 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEe
Confidence            521       48999999983                     34455555555433    3      4     6899999


Q ss_pred             cCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       186 SS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      ||...+.....    +.++ .+....|+++|...+.            ++++++++||.+.++...
T Consensus       151 sS~~~~~~~~~----~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (250)
T 1yo6_A          151 SSGLGSITDNT----SGSA-QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             CCGGGCSTTCC----STTS-SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------
T ss_pred             ccCccccCCcc----cccc-cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC
Confidence            99876544311    1111 1223678888754332            699999999999888643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.65  E-value=4.3e-16  Score=131.72  Aligned_cols=144  Identities=21%  Similarity=0.133  Sum_probs=100.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         6 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~~~~~~~~~~~   76 (247)
T 2jah_A            6 QGKVALIT----GASSGIGEATARALAAEGAAVAIAARRVEKLRALGDE----LT-AAGAKVHVLELDVADRQGVDAAVA   76 (247)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    00 012245556666   667766664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.++++++    ++.+ ++||++||...+....     
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----  150 (247)
T 2jah_A           77 STVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR-----  150 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC-----
Confidence            2     148999999982                    445555555544    4455 8999999987654321     


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                             ....|+++|...            ..++++++|+||.+.++..
T Consensus       151 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  193 (247)
T 2jah_A          151 -------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELR  193 (247)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGG
T ss_pred             -------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcch
Confidence                   126688877432            2379999999999988753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.65  E-value=3.3e-16  Score=133.09  Aligned_cols=143  Identities=17%  Similarity=0.179  Sum_probs=98.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+.  .+...+.    +. .....+..+.+|   ++++.+++
T Consensus         2 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~   72 (258)
T 3a28_C            2 SKVAMVT----GGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKL----IE-AADQKAVFVGLDVTDKANFDSAI   72 (258)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHH----HH-TTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHH
Confidence            5799999    999999999999999999999999998754  3321100    00 012245556666   66676666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCC-CEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGV-KQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~-~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|+|||+||.                    |+.++.++++++    ++.+. ++||++||...+....   
T Consensus        73 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  149 (258)
T 3a28_C           73 DEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP---  149 (258)
T ss_dssp             HHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT---
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC---
Confidence            52     148999999982                    344444454444    44466 8999999987664321   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ....|+++|...+            .++++++++||.+.++.
T Consensus       150 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  191 (258)
T 3a28_C          150 ---------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM  191 (258)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred             ---------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence                     1266888774433            26999999999998764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.65  E-value=5.6e-16  Score=133.11  Aligned_cols=141  Identities=14%  Similarity=0.134  Sum_probs=99.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +.. ..+..+.+|   ++++.++++.
T Consensus        22 k~vlVT----Gas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~Dv~d~~~v~~~~~~   90 (272)
T 2nwq_A           22 STLFIT----GATSGFGEACARRFAEAGWSLVLTGRREERLQALAGE-------LSAKTRVLPLTLDVRDRAAMSAAVDN   90 (272)
T ss_dssp             CEEEES----STTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HTTTSCEEEEECCTTCHHHHHHHHHT
T ss_pred             cEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------hhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            789999    9999999999999999999999999987544322110       100 245556665   7778877765


Q ss_pred             C-----cccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCC-EEEEEcCcccccCCCCCCc
Q 025587          151 V-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       151 ~-----~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ++|+|||+||.                     |+.+    ++.+++.+++.+.+ +||++||...+....    
T Consensus        91 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~----  166 (272)
T 2nwq_A           91 LPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP----  166 (272)
T ss_dssp             CCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT----
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC----
Confidence            3     58999999983                     2334    44556666666677 999999987664321    


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                              ....|+++|...+.            ++++++|+||.+.++..
T Consensus       167 --------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~  209 (272)
T 2nwq_A          167 --------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFS  209 (272)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----
T ss_pred             --------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcch
Confidence                    12668888854432            59999999999998864

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.65  E-value=4.1e-16  Score=133.89  Aligned_cols=147  Identities=16%  Similarity=0.137  Sum_probs=102.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +... ....+.++.+|   ++++.+++
T Consensus        31 ~~k~vlVT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~  102 (279)
T 1xg5_A           31 RDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE----CKSAGYPGTLIPYRCDLSNEEDILSMF  102 (279)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH----HHhcCCCceEEEEEecCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999986544322100    0000 01234555666   67777666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCC--CEEEEEcCcccccCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGV--KQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~--~~~v~iSS~~vy~~~~~~  197 (250)
                      +.     .++|+|||+||.                    |+.+    ++.+++.+++.+.  ++||++||...+..... 
T Consensus       103 ~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~-  181 (279)
T 1xg5_A          103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-  181 (279)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC-
Confidence            52     148999999982                    3344    7788888888775  79999999887642111 


Q ss_pred             CccCCCCCCCCCChhHHHHHHH--------------HhCCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYIS--------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~--------------e~~~~~~ilRp~~i~G~~  237 (250)
                               +....|++.|...              ..++++++|+||.+.++.
T Consensus       182 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~  226 (279)
T 1xg5_A          182 ---------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF  226 (279)
T ss_dssp             ---------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence                     1125688777432              236999999999998875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.65  E-value=1e-15  Score=131.16  Aligned_cols=136  Identities=17%  Similarity=0.227  Sum_probs=99.4

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~  147 (250)
                      ...+|+||||    ||+|+||++++++|+++|++|++++|+.+....               .+..+.+   |.+++.++
T Consensus        11 ~~~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~Dv~~~~~v~~~   71 (269)
T 3vtz_A           11 EFTDKVAIVT----GGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN---------------VSDHFKIDVTNEEEVKEA   71 (269)
T ss_dssp             TTTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCC--CTT---------------SSEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC---------------ceeEEEecCCCHHHHHHH
Confidence            3457899999    999999999999999999999999998754321               1223333   57777776


Q ss_pred             hcCC-----cccEEEeCCC--------------------cCHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGV-----TFDVVLDNNG--------------------KNLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++..     ++|+|||+||                    +|+.++.+++++    +++.+.++||++||...|.....  
T Consensus        72 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  149 (269)
T 3vtz_A           72 VEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN--  149 (269)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC--
Confidence            6531     5899999999                    245555555544    44566789999999887764322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+.           ++++++|+||.|.++.
T Consensus       150 ----------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~  189 (269)
T 3vtz_A          150 ----------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPM  189 (269)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcc
Confidence                      2679888854332           6899999999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.64  E-value=4.3e-16  Score=132.76  Aligned_cols=145  Identities=16%  Similarity=0.148  Sum_probs=98.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   .+++.++++
T Consensus        28 ~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~v~~~~~   98 (262)
T 3rkr_A           28 SGQVAVVT----GASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE----IV-AAGGEAESHACDLSHSDAIAAFAT   98 (262)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-HhCCceeEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    00 012345566666   666666664


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                     |+.++.+++++    +++.+.++||++||...+.....   
T Consensus        99 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  175 (262)
T 3rkr_A           99 GVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD---  175 (262)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT---
T ss_pred             HHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC---
Confidence            3     258999999983                     34454444444    55567789999999876643222   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+++|...+            .++++++++||.+.++..
T Consensus       176 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~  217 (262)
T 3rkr_A          176 ---------GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG  217 (262)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcc
Confidence                     267888874332            369999999999988764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.64  E-value=3e-16  Score=133.45  Aligned_cols=144  Identities=15%  Similarity=0.147  Sum_probs=105.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   .+++.+++
T Consensus         6 l~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~   73 (255)
T 4eso_A            6 YQGKKAIVI----GGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE--------EFGPRVHALRSDIADLNEIAVLG   73 (255)
T ss_dssp             TTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCcceEEEccCCCHHHHHHHH
Confidence            346899999    999999999999999999999999998755443211        112345666666   66666555


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.     .++|++||+||                    +|+.++.++++++...  ..++||++||...+.....     
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  148 (255)
T 4eso_A           74 AAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG-----  148 (255)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT-----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC-----
Confidence            42     15899999998                    3566778888887663  2358999999876654221     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|+++|...+.            +++++.++||.+.++...
T Consensus       149 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  191 (255)
T 4eso_A          149 -------MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKG  191 (255)
T ss_dssp             -------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTT
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccc
Confidence                   3678888853332            699999999999998653

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.64  E-value=5.1e-16  Score=131.82  Aligned_cols=138  Identities=19%  Similarity=0.152  Sum_probs=98.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+. +...+       ++.  . .++.+|   ++++.++++
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~-------~~~--~-~~~~~D~~~~~~~~~~~~   69 (256)
T 2d1y_A            5 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAE-------AIG--G-AFFQVDLEDERERVRFVE   69 (256)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHH-------HHT--C-EEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH-------Hhh--C-CEEEeeCCCHHHHHHHHH
Confidence            35799999    999999999999999999999999998754 32110       111  2 444555   666766664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+....     
T Consensus        70 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  144 (256)
T 2d1y_A           70 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ-----  144 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-----
Confidence            3     158999999982                    44555555554    4456778999999987553321     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                             ....|+++|...+            .++++++++||.+.++.
T Consensus       145 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (256)
T 2d1y_A          145 -------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  186 (256)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence                   1366888874433            26899999999998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.64  E-value=2.9e-16  Score=132.57  Aligned_cols=146  Identities=18%  Similarity=0.190  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC-CCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+ .+..+.+.+.    +. ....++.++.+|   ++++.+++
T Consensus         6 ~~k~vlVT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   76 (258)
T 3afn_B            6 KGKRVLIT----GSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIAS----MR-ADGGDAAFFAADLATSEACQQLV   76 (258)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHH----HH-HTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHH----HH-hcCCceEEEECCCCCHHHHHHHH
Confidence            45899999    999999999999999999999999998 5443321100    00 012345566666   67777776


Q ss_pred             cCC-----cccEEEeCCCc---------------------CHHhHHHHHHHH----HhCC--C---CEEEEEcCccccc-
Q 025587          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG--V---KQFLFISSAGIYK-  192 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~--~---~~~v~iSS~~vy~-  192 (250)
                      +..     ++|+|||+||.                     |+.++.++++++    ++.+  .   ++||++||...+. 
T Consensus        77 ~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  156 (258)
T 3afn_B           77 DEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG  156 (258)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC
Confidence            521     48999999984                     234455444433    3322  2   7999999987665 


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ....|+.+|...+.            +++++++|||.++++...
T Consensus       157 ~~~------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  203 (258)
T 3afn_B          157 GGP------------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHA  203 (258)
T ss_dssp             CCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGT
T ss_pred             CCC------------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccc
Confidence            211            12568877744332            699999999999998654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.64  E-value=1.1e-15  Score=129.11  Aligned_cols=140  Identities=17%  Similarity=0.125  Sum_probs=99.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.          .++..+.+|   ++++.++++
T Consensus         4 ~~k~vlVT----Gas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~   69 (245)
T 1uls_A            4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----------VGAHPVVMDVADPASVERGFA   69 (245)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----------TTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------cCCEEEEecCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987544432111          124555555   667766665


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.++.+++    ++.+.++||++||...++..      
T Consensus        70 ~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------  143 (245)
T 1uls_A           70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------  143 (245)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------
Confidence            3     248999999992                    455555555444    44567899999998843321      


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ....|+.+|...            +.++++++|+||.+.++...
T Consensus       144 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  187 (245)
T 1uls_A          144 -------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA  187 (245)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh
Confidence                   125688777432            23799999999999888643

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.64  E-value=2.3e-16  Score=133.47  Aligned_cols=143  Identities=15%  Similarity=0.174  Sum_probs=102.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   ++++.++++
T Consensus         8 ~gk~~lVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~~   75 (248)
T 3op4_A            8 EGKVALVT----GASRGIGKAIAELLAERGAKVIGTATSESGAQAISD--------YLGDNGKGMALNVTNPESIEAVLK   75 (248)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------HHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhcccceEEEEeCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998755443211        112234445555   777777665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|++||+||.                    |+.++.++++++    ++.+.++||++||...+.....    
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----  151 (248)
T 3op4_A           76 AITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG----  151 (248)
T ss_dssp             HHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC----
Confidence            21     58999999992                    455555555554    4456789999999876644322    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+++|...+            .+++++.++||.+.++...
T Consensus       152 --------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  194 (248)
T 3op4_A          152 --------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK  194 (248)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTT
T ss_pred             --------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhh
Confidence                    267888885332            2699999999999988654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.64  E-value=2.4e-16  Score=133.98  Aligned_cols=144  Identities=15%  Similarity=0.149  Sum_probs=102.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus        11 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~d~~~v~~~~~   81 (256)
T 3gaf_A           11 NDAVAIVT----GAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAA----IR-QAGGKAIGLECNVTDEQHREAVIK   81 (256)
T ss_dssp             TTCEEEEC----SCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    00 012345556666   666666665


Q ss_pred             CC-----cccEEEeCCCc-------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 GV-----TFDVVLDNNGK-------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~-------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      ..     ++|+|||+||.                   |+.++.+++++    +++.+.++||++||...+.....     
T Consensus        82 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  156 (256)
T 3gaf_A           82 AALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR-----  156 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC-----
Confidence            21     58999999982                   45555555555    45567789999999876644222     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                             ...|+++|...+.            +++++.++||.+.++.
T Consensus       157 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  197 (256)
T 3gaf_A          157 -------MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA  197 (256)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence                   2678888844332            6999999999998874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.64  E-value=3.5e-16  Score=133.93  Aligned_cols=137  Identities=17%  Similarity=0.116  Sum_probs=99.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-  150 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+......             .+..+..|.+++.++++. 
T Consensus        26 l~gk~vlVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------------~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           26 FEGKVALVT----GAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------------HLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------------ECCCCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------------ccCcCCCCHHHHHHHHHHH
Confidence            346899999    99999999999999999999999999875543210             112223356666555432 


Q ss_pred             ----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 ----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                          .++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+....       
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------  161 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP-------  161 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT-------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-------
Confidence                14899999999                    2455666666665    666778999999987664322       


Q ss_pred             CCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                           ....|+++|...+.            ++++++++||.++++.
T Consensus       162 -----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  203 (266)
T 3uxy_A          162 -----GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM  203 (266)
T ss_dssp             -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred             -----CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence                 13678888844332            6999999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.64  E-value=3.7e-16  Score=131.35  Aligned_cols=143  Identities=17%  Similarity=0.188  Sum_probs=93.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++ .|+.+..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus         4 ~~~~vlIt----GasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   74 (247)
T 2hq1_A            4 KGKTAIVT----GSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEE----FK-AAGINVVVAKGDVKNPEDVENMV   74 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHH----HH-HTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCcEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHHHH
Confidence            35799999    999999999999999999999999 5555433321100    00 012345566666   66777666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcc-cccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAG-IYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~-vy~~~~~~~  198 (250)
                      +..     ++|+|||+||.                    |+.++.+++++    +++.+.++||++||.. .|+..    
T Consensus        75 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  150 (247)
T 2hq1_A           75 KTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA----  150 (247)
T ss_dssp             HHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC----
Confidence            521     48999999982                    45565555544    4445778999999974 44321    


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ....|+.+|...+.            ++++++++||.+.++.
T Consensus       151 ---------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (247)
T 2hq1_A          151 ---------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM  192 (247)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccc
Confidence                     12568887753332            6899999999998764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.64  E-value=5.1e-16  Score=134.07  Aligned_cols=148  Identities=18%  Similarity=0.152  Sum_probs=103.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+..+.+|   ++++.++++
T Consensus        27 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~d~~~v~~~~~   97 (283)
T 3v8b_A           27 PSPVALIT----GAGSGIGRATALALAADGVTVGALGRTRTEVEEVADE----IV-GAGGQAIALEADVSDELQMRNAVR   97 (283)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HT-TTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432111    00 012245556665   666666665


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                     |+.++.++++++    ++.+.++||++||...+....    
T Consensus        98 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~----  173 (283)
T 3v8b_A           98 DLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT----  173 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC----
Confidence            32     58999999992                     445555555555    666778999999977553111    


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                            .+....|+++|...+.            +++++.|+||.+.++...
T Consensus       174 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  219 (283)
T 3v8b_A          174 ------TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISD  219 (283)
T ss_dssp             ------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTC
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccc
Confidence                  1113678888854332            589999999999988654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.64  E-value=2.4e-16  Score=135.86  Aligned_cols=146  Identities=18%  Similarity=0.211  Sum_probs=98.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus        43 ~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~d~~~v~~~~~  113 (285)
T 2c07_A           43 ENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDE----IK-SFGYESSGYAGDVSKKEEISEVIN  113 (285)
T ss_dssp             SSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHH----HH-TTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH----HH-hcCCceeEEECCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999988876443321100    00 012245556666   677777664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++    +.+++.+++.+.++||++||...+.....    
T Consensus       114 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----  189 (285)
T 2c07_A          114 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG----  189 (285)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC----
Confidence            2     258999999982                    34454    44444455567789999999876543221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+++|...+            .+++++++|||.+.++...
T Consensus       190 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  232 (285)
T 2c07_A          190 --------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD  232 (285)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh
Confidence                    256887775332            2699999999999988643

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.64  E-value=3.6e-16  Score=133.99  Aligned_cols=148  Identities=18%  Similarity=0.168  Sum_probs=102.6

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      ..++|+||||    ||+|+||++++++|+++|++|++++|.. +..+.+.+.    +. .....+..+.+|   .+++.+
T Consensus        25 ~l~~k~vlVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~d~~~v~~   95 (269)
T 4dmm_A           25 PLTDRIALVT----GASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAA----IA-AAGGEAFAVKADVSQESEVEA   95 (269)
T ss_dssp             TTTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHH
Confidence            3456899999    9999999999999999999999999854 222211100    00 012345566666   666766


Q ss_pred             hhcCC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          147 VVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       147 ~l~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +++..     ++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        96 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  174 (269)
T 4dmm_A           96 LFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG-  174 (269)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC-
Confidence            66531     58999999992                    455555555554    5556789999999876544322 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+++|...+            .++++++++||.|.++...
T Consensus       175 -----------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (269)
T 4dmm_A          175 -----------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS  217 (269)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc
Confidence                       267888885332            2699999999999988654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.64  E-value=3.1e-16  Score=133.36  Aligned_cols=149  Identities=19%  Similarity=0.184  Sum_probs=104.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.. +.+.+.     .......+.++.+|   .+++.+++
T Consensus         6 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~v~~~~   76 (264)
T 3i4f_A            6 FVRHALIT----AGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKET-----YKDVEERLQFVQADVTKKEDLHKIV   76 (264)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-----TGGGGGGEEEEECCTTSHHHHHHHH
T ss_pred             ccCEEEEe----CCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-----HHhcCCceEEEEecCCCHHHHHHHH
Confidence            46899999    9999999999999999999999998876332 111100     00112346666666   67777766


Q ss_pred             cCC-----cccEEEeCCCc----------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~----------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +..     ++|+|||+||.                      |+.++.++++++    ++.+.++||++||.+.+..... 
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~-  155 (264)
T 3i4f_A           77 EEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGW-  155 (264)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCC-
T ss_pred             HHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCC-
Confidence            532     58999999991                      455666666665    6667789999999865532211 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                               +....|+++|...+            .++++++++||.++++....
T Consensus       156 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  201 (264)
T 3i4f_A          156 ---------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA  201 (264)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh
Confidence                     11367888874433            36999999999999987554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.64  E-value=5.2e-16  Score=132.23  Aligned_cols=147  Identities=16%  Similarity=0.107  Sum_probs=100.9

Q ss_pred             cCcEEEEEecCCCcch-hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHA-VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG-~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+| .||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   .+++.+++
T Consensus        21 ~~k~vlIT----Gasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (266)
T 3o38_A           21 KGKVVLVT----AAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQ----LADLGLGRVEAVVCDVTSTEAVDALI   92 (266)
T ss_dssp             TTCEEEES----SCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH----HHhcCCCceEEEEeCCCCHHHHHHHH
Confidence            46899999    9998 699999999999999999999987554322110    001112356667676   66666666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHHHHh----C-CCCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKS----S-GVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~-~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     ++|+|||+||.                    |+.++.++++++..    . +.++||++||...+.....  
T Consensus        93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--  170 (266)
T 3o38_A           93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS--  170 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT--
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC--
Confidence            432     58999999992                    45555666555543    3 5678999999876543221  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                ...|+++|...+            .++++++++||.+.++...
T Consensus       171 ----------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  213 (266)
T 3o38_A          171 ----------QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLE  213 (266)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhh
Confidence                      267888884433            3699999999999988643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.63  E-value=4.1e-16  Score=131.39  Aligned_cols=147  Identities=15%  Similarity=0.162  Sum_probs=103.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   74 (247)
T 3lyl_A            4 NEKVALVT----GASRGIGFEVAHALASKGATVVGTATSQASAEKFENS----MK-EKGFKARGLVLNISDIESIQNFFA   74 (247)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    00 012345566666   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....    
T Consensus        75 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  150 (247)
T 3lyl_A           75 EIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG----  150 (247)
T ss_dssp             HHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC----
Confidence            3     258999999992                    445555555544    4456679999999876654322    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                              ...|+++|...+            .++++++++||.+.++..+.
T Consensus       151 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  194 (247)
T 3lyl_A          151 --------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK  194 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh
Confidence                    267888885322            26999999999999987543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.63  E-value=8.6e-16  Score=130.14  Aligned_cols=137  Identities=12%  Similarity=0.103  Sum_probs=100.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..|+|+||||    ||+|+||++++++|+++|++|++++|+.+....              ..+.++..|.+++.++++.
T Consensus        19 ~~m~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~d~~d~~~v~~~~~~   80 (251)
T 3orf_A           19 SHMSKNILVL----GGSGALGAEVVKFFKSKSWNTISIDFRENPNAD--------------HSFTIKDSGEEEIKSVIEK   80 (251)
T ss_dssp             ---CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS--------------EEEECSCSSHHHHHHHHHH
T ss_pred             cccCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------cceEEEeCCHHHHHHHHHH
Confidence            4567899999    999999999999999999999999998754331              1223335577777776643


Q ss_pred             -----CcccEEEeCCC---------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 -----VTFDVVLDNNG---------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 -----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                           .++|+|||+||                     +|+.++.++++++...  ..++||++||...+.+...      
T Consensus        81 ~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~------  154 (251)
T 3orf_A           81 INSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG------  154 (251)
T ss_dssp             HHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------
T ss_pred             HHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC------
Confidence                 25899999998                     2566777788877663  1358999999887643221      


Q ss_pred             CCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~  237 (250)
                            ...|+++|...+              .++++++++||.|.++.
T Consensus       155 ------~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~  197 (251)
T 3orf_A          155 ------MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT  197 (251)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH
T ss_pred             ------CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc
Confidence                  367888884332              35899999999998874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.63  E-value=2.1e-15  Score=126.65  Aligned_cols=139  Identities=19%  Similarity=0.201  Sum_probs=95.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH--HHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP--AEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~--~~l~~~l~~  150 (250)
                      |+|+||||    ||+|+||++++++|+++|++|++++|+.+...          .++   ++..+.+|.  +++.++++.
T Consensus         1 ~~k~vlVT----Gas~giG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~---~~~~~~~D~~~~~~~~~~~~   63 (239)
T 2ekp_A            1 MERKALVT----GGSRGIGRAIAEALVARGYRVAIASRNPEEAA----------QSL---GAVPLPTDLEKDDPKGLVKR   63 (239)
T ss_dssp             -CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH----------HHH---TCEEEECCTTTSCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------Hhh---CcEEEecCCchHHHHHHHHH
Confidence            35799999    99999999999999999999999999875421          011   244555552  333333321


Q ss_pred             -----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           .++|+|||+||.                    |+.++.+    +++.+++.+.++||++||...+.....     
T Consensus        64 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  138 (239)
T 2ekp_A           64 ALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP-----  138 (239)
T ss_dssp             HHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC-----
Confidence                 148999999982                    3344444    444445567889999999887754310     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                           +....|+.+|...+            .+++++++|||.+.++..
T Consensus       139 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  182 (239)
T 2ekp_A          139 -----VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT  182 (239)
T ss_dssp             -----SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchh
Confidence                 11367888774332            279999999999998853

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.63  E-value=2.1e-16  Score=138.79  Aligned_cols=147  Identities=16%  Similarity=0.165  Sum_probs=100.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +... ....+.++.+|   .+++.+++
T Consensus         7 ~~k~vlVT----Gas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            7 AGRTAFVT----GGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALAT----LEAEGSGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             TTCEEEEE----TTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEc----CCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence            46799999    9999999999999999999999999987654432110    0000 01145566666   66666666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----C------CCCEEEEEcCcccccC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----S------GVKQFLFISSAGIYKP  193 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~------~~~~~v~iSS~~vy~~  193 (250)
                      +.     ..+|+|||+||+                    |+.++.++++++..    .      +.++||++||...+..
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~  158 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA  158 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence            42     258999999992                    45666666665543    2      3568999999887654


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHH----HH--------HhCCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKY----IS--------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~----~~--------e~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|+++|.    +.        +.++++++|+||.|.++...
T Consensus       159 ~~~------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  204 (319)
T 3ioy_A          159 AGS------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYA  204 (319)
T ss_dssp             CSS------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----
T ss_pred             CCC------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccc
Confidence            322            267988886    22        22699999999999988643

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.63  E-value=1.1e-15  Score=127.64  Aligned_cols=141  Identities=16%  Similarity=0.120  Sum_probs=97.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.        ....+.++.+|   .+++.++++.
T Consensus         1 Mk~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~v~~~~~~   68 (230)
T 3guy_A            1 MSLIVIT----GASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNC--------LSNNVGYRARDLASHQEVEQLFEQ   68 (230)
T ss_dssp             --CEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--------CSSCCCEEECCTTCHHHHHHHHHS
T ss_pred             CCEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--------HhhccCeEeecCCCHHHHHHHHHH
Confidence            3689999    9999999999999999999999999987655433211        12344555555   7778887765


Q ss_pred             C--cccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          151 V--TFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       151 ~--~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      .  .+|+|||+||                    +|+.++.++++++..    .+. +||++||...+.....        
T Consensus        69 ~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~--------  139 (230)
T 3guy_A           69 LDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQ--------  139 (230)
T ss_dssp             CSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTT--------
T ss_pred             HhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCC--------
Confidence            3  3599999998                    245666666666544    333 9999999887654322        


Q ss_pred             CCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          205 VKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                          ...|+++|...+.            +++++.++||.+..+...
T Consensus       140 ----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  182 (230)
T 3guy_A          140 ----ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE  182 (230)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------
T ss_pred             ----CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH
Confidence                2678888844432            699999999999988643

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.63  E-value=6.4e-16  Score=132.92  Aligned_cols=152  Identities=18%  Similarity=0.134  Sum_probs=101.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--CCCcccc----h--hcCCceEEeCC---
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNE----I--VSAGGKTVWGD---  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~~~~----~--~~~~v~~v~~D---  140 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|..+........  ...++.+    +  ....+..+.+|   
T Consensus        13 l~gk~~lVT----Gas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           13 LQGRVAFIT----GAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            346899999    9999999999999999999999999854221110000  0000000    1  12345555566   


Q ss_pred             HHHHHhhhcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCccc
Q 025587          141 PAEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGI  190 (250)
Q Consensus       141 ~~~l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~v  190 (250)
                      ++++.++++.     .++|+|||+||.                    |+.++.++++++    ++.+ .++||++||...
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            6777776652     158999999992                    455555555554    4443 578999999876


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      +.....            ...|+++|...+            .++++++|+||.++++...
T Consensus       169 ~~~~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~  217 (280)
T 3pgx_A          169 LKATPG------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE  217 (280)
T ss_dssp             TSCCTT------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             ccCCCC------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc
Confidence            644322            367888884333            3699999999999999754

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.63  E-value=1.9e-16  Score=135.13  Aligned_cols=144  Identities=17%  Similarity=0.146  Sum_probs=100.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.. ....++..+.+|   ++++.++++
T Consensus         7 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (267)
T 2gdz_A            7 GKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAA----LHEQFEPQKTLFIQCDVADQQQLRDTFR   78 (267)
T ss_dssp             TCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEE----CCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence            5799999    9999999999999999999999999986543221000    000 012235566666   677777665


Q ss_pred             C-----CcccEEEeCCCc------------CHH----hHHHHHHHHHhCC---CCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK------------NLD----AVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------~~~----~~~~ll~~~~~~~---~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      .     .++|+|||+||.            |+.    .++.+++.+++.+   .++||++||...+.....         
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  149 (267)
T 2gdz_A           79 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ---------  149 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT---------
T ss_pred             HHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC---------
Confidence            3     148999999993            233    4566777776643   679999999887754221         


Q ss_pred             CCCCChhHHHHHHH--------------HhCCcEEEEecCeeecCC
Q 025587          206 KPDAGHVQVEKYIS--------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       206 ~~~~~~y~~~k~~~--------------e~~~~~~ilRp~~i~G~~  237 (250)
                         ...|+++|...              ..++++++|+||.+.++.
T Consensus       150 ---~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~  192 (267)
T 2gdz_A          150 ---QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  192 (267)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence               25677776321              236999999999998874

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.63  E-value=5.2e-16  Score=133.49  Aligned_cols=143  Identities=18%  Similarity=0.221  Sum_probs=98.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+       ++.. .++.++.+|   ++++.+++
T Consensus        28 ~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~-------~l~~~~~~~~~~~Dv~d~~~v~~~~   96 (276)
T 2b4q_A           28 AGRIALVT----GGSRGIGQMIAQGLLEAGARVFICARDAEACADTAT-------RLSAYGDCQAIPADLSSEAGARRLA   96 (276)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------HHTTSSCEEECCCCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------HHHhcCceEEEEeeCCCHHHHHHHH
Confidence            46899999    999999999999999999999999998754432211       0110 134444455   66776666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHH----HHHHHHHhCCC----CEEEEEcCcccccCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGV----KQFLFISSAGIYKPAD  195 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~----~ll~~~~~~~~----~~~v~iSS~~vy~~~~  195 (250)
                      +.     .++|+|||+||.                    |+.++.    .+++.+++.+.    ++||++||...+....
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~  176 (276)
T 2b4q_A           97 QALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG  176 (276)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC
Confidence            52     258999999982                    344554    44444545454    8999999988765422


Q ss_pred             CCCccCCCCCCCCCC-hhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          196 EPPHVEGDVVKPDAG-HVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~-~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      .            .. .|+++|...+            .++++++|+||.+.++..
T Consensus       177 ~------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  220 (276)
T 2b4q_A          177 E------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT  220 (276)
T ss_dssp             C------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT
T ss_pred             C------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch
Confidence            1            13 5887774333            269999999999998864

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.63  E-value=7.6e-16  Score=130.59  Aligned_cols=154  Identities=12%  Similarity=0.118  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+......    ..+.......+.++.+|   .+++.++++
T Consensus        13 ~~k~vlIT----GasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~----~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A           13 VNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVT----EKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             TTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHH----HHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHH----HHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence            45789999    99999999999999999999999999764432110    00000113345666666   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHHHHh----CC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADWAKS----SG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~----~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                    |+.++.++++++.+    .+ .++||++||...+......  
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  162 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS--  162 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE--
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc--
Confidence            3     248999999983                    45566666666543    23 4799999998765432110  


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                        ..+..+ ...|+.+|...+            .+++++++|||.++++...
T Consensus       163 --~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (265)
T 1h5q_A          163 --LNGSLT-QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA  211 (265)
T ss_dssp             --TTEECS-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             --cccccc-ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc
Confidence              111122 267887775433            2699999999999998643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.63  E-value=1e-15  Score=130.01  Aligned_cols=134  Identities=19%  Similarity=0.185  Sum_probs=94.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.                +..+.+|   ++++.++++
T Consensus        20 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------------~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           20 MSRSVLVT----GGNRGIGLAIARAFADAGDKVAITYRSGEPPEG----------------FLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT----------------SEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc----------------ceEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999997654321                3344444   677766664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+....     
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  154 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA-----  154 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-----
Confidence            3     248999999982                    45555555554    4445678999999976543211     


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             ....|+++|...+            .++++++++||.+.++..
T Consensus       155 -------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (253)
T 2nm0_A          155 -------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMT  197 (253)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence                   1256887775332            268999999999988754

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.63  E-value=3.1e-16  Score=133.80  Aligned_cols=144  Identities=19%  Similarity=0.174  Sum_probs=101.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   ++++.+++
T Consensus         9 l~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~   79 (264)
T 3ucx_A            9 LTDKVVVIS----GVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQ----VT-DTGRRALSVGTDITDDAQVAHLV   79 (264)
T ss_dssp             TTTCEEEEE----SCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCcEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987554432111    00 012345566666   66776666


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|+|||+||.                     |+.++.++++++    ++.+ ++||++||...+.....  
T Consensus        80 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~--  156 (264)
T 3ucx_A           80 DETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAK--  156 (264)
T ss_dssp             HHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTT--
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCc--
Confidence            42     258999999972                     455555555554    3434 79999999876654322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+            .+++++.++||.|+++.
T Consensus       157 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  197 (264)
T 3ucx_A          157 ----------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT  197 (264)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred             ----------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence                      267888884333            36999999999998875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.63  E-value=5.9e-16  Score=132.96  Aligned_cols=143  Identities=16%  Similarity=0.126  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        .....+.++.+|   ++++.++++
T Consensus        27 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~~   94 (272)
T 4dyv_A           27 GKKIAIVT----GAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA--------EIGDDALCVPTDVTDPDSVRALFT   94 (272)
T ss_dssp             -CCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHTSCCEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhCCCeEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998755443211        112345566666   677777665


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCcccccCCCCC
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~  197 (250)
                      ..     ++|+|||+||.                     |+.+    ++.+++.+++.+  .++||++||...+..... 
T Consensus        95 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-  173 (272)
T 4dyv_A           95 ATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY-  173 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT-
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC-
Confidence            21     58999999992                     3445    444455555544  469999999876643221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+++|...+            .+++++.++||.|.++...
T Consensus       174 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  216 (272)
T 4dyv_A          174 -----------SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ  216 (272)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh
Confidence                       267888884433            2699999999999988643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.63  E-value=7.7e-16  Score=131.93  Aligned_cols=140  Identities=19%  Similarity=0.193  Sum_probs=98.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.       +  .++.++.+|   ++++.++++
T Consensus         8 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~--~~~~~~~~Dv~d~~~v~~~~~   74 (270)
T 1yde_A            8 AGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE-------L--PGAVFILCDVTQEDDVKTLVS   74 (270)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------C--TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h--cCCeEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110       0  124555565   677776665


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ..     ++|+|||+||.                     |+.++.++++++..   .+.++||++||...+.....    
T Consensus        75 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  150 (270)
T 1yde_A           75 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ----  150 (270)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC----
Confidence            21     48999999982                     34556666665542   12479999999764432211    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                              ...|+++|...+            .++++++||||.++++.
T Consensus       151 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          151 --------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             --------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence                    256887774333            37999999999999984

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.63  E-value=4.7e-16  Score=133.69  Aligned_cols=146  Identities=15%  Similarity=0.110  Sum_probs=103.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+..+.+|   .+++.+++
T Consensus        25 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (277)
T 4fc7_A           25 LRDKVAFIT----GGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK----LAGATGRRCLPLSMDVRAPPAVMAAV   96 (277)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999987543321110    001123345666666   66666666


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+.....   
T Consensus        97 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  173 (277)
T 4fc7_A           97 DQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL---  173 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT---
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC---
Confidence            42     15899999998                    2556666666665    3345679999999876654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .+++++.|+||.|.++.
T Consensus       174 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  214 (277)
T 4fc7_A          174 ---------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE  214 (277)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence                     266888774333            26999999999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.63  E-value=1.2e-15  Score=132.24  Aligned_cols=146  Identities=17%  Similarity=0.141  Sum_probs=104.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+........    ........+.++.+|   ++++.+++
T Consensus        45 l~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~~  116 (291)
T 3ijr_A           45 LKGKNVLIT----GGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQ----YVEKEGVKCVLLPGDLSDEQHCKDIV  116 (291)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH----HHHTTTCCEEEEESCTTSHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH----HHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999987432110000    000112345566666   66666666


Q ss_pred             cCC-----cccEEEeCCC---------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GGV-----TFDVVLDNNG---------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +..     ++|+|||+||                     +|+.++.++++++...  ..++||++||...+.....    
T Consensus       117 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----  192 (291)
T 3ijr_A          117 QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET----  192 (291)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT----
T ss_pred             HHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC----
Confidence            421     5899999998                     2567788888888763  3459999999887765332    


Q ss_pred             CCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                              ...|+++|...+.            +++++.|+||.|+++.
T Consensus       193 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  233 (291)
T 3ijr_A          193 --------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL  233 (291)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred             --------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence                    2668888744332            6999999999999985

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.63  E-value=3.2e-16  Score=132.59  Aligned_cols=141  Identities=17%  Similarity=0.238  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        .....+..+.+|   ++++.++++
T Consensus         5 ~gk~vlVT----Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~   72 (247)
T 3rwb_A            5 AGKTALVT----GAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA--------SIGKKARAIAADISDPGSVKALFA   72 (247)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--------HHCTTEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HhCCceEEEEcCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998755443211        112344455555   677777665


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHH----HHhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                    |+.++.++.++    +++.+ .++||++||...+.....   
T Consensus        73 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  149 (247)
T 3rwb_A           73 EIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN---  149 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT---
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC---
Confidence            21     48999999992                    45555555554    66655 679999999876654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .+++++.++||.+.++.
T Consensus       150 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  190 (247)
T 3rwb_A          150 ---------MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG  190 (247)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence                     267888883322            37999999999998874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.62  E-value=2.4e-16  Score=135.06  Aligned_cols=146  Identities=14%  Similarity=0.077  Sum_probs=100.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   .+++.++++
T Consensus        30 ~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~v~~~~~  100 (272)
T 1yb1_A           30 TGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK----CK-GLGAKVHTFVVDCSNREDIYSSAK  100 (272)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHH----HH-hcCCeEEEEEeeCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322100    00 012345666666   666666664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...|....     
T Consensus       101 ~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----  175 (272)
T 1yb1_A          101 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----  175 (272)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----
T ss_pred             HHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-----
Confidence            2     158999999982                    3444    44455555667788999999987664321     


Q ss_pred             CCCCCCCCCChhHHHHHHH---------H------hCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------E------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e------~~~~~~ilRp~~i~G~~~~  239 (250)
                             ....|+.+|...         |      .+++++++|||.+.++...
T Consensus       176 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          176 -------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence                   125577776322         2      2689999999999988643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.62  E-value=2.8e-16  Score=134.85  Aligned_cols=146  Identities=18%  Similarity=0.183  Sum_probs=101.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +. .....+.++.+|   .+++.+++
T Consensus        24 l~gk~~lVT----Gas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~d~~~v~~~~   94 (271)
T 4ibo_A           24 LGGRTALVT----GSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE----FR-NVGHDAEAVAFDVTSESEIIEAF   94 (271)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH----HH-HTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987554432110    00 012234555555   67777766


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHHH----HHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~l----l~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.++.++    ++.+++.+.++||++||...+.....   
T Consensus        95 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~---  171 (271)
T 4ibo_A           95 ARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT---  171 (271)
T ss_dssp             HHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT---
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC---
Confidence            52     158999999992                    44555555    44455556789999999775533221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|+++|...+            .+++++.++||.+.++..
T Consensus       172 ---------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  213 (271)
T 4ibo_A          172 ---------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN  213 (271)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch
Confidence                     267888874333            369999999999998854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.62  E-value=6.7e-16  Score=132.24  Aligned_cols=144  Identities=16%  Similarity=0.130  Sum_probs=99.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---H----HHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P----AEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~----~~l  144 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++| +.+..+.+.+.    +.......+.++.+|   .    +++
T Consensus        10 ~~k~~lVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (276)
T 1mxh_A           10 ECPAAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAE----LNAARAGSAVLCKGDLSLSSSLLDCC   81 (276)
T ss_dssp             -CCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHHSTTCEEEEECCCSSSTTHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH----HHHhcCCceEEEeccCCCccccHHHH
Confidence            35789999    99999999999999999999999999 65443322100    000002345566666   6    777


Q ss_pred             HhhhcCC-----cccEEEeCCCc-------------------------------CHHhHHHHHHHHHh---CCC------
Q 025587          145 GNVVGGV-----TFDVVLDNNGK-------------------------------NLDAVRPVADWAKS---SGV------  179 (250)
Q Consensus       145 ~~~l~~~-----~~d~Vi~~ag~-------------------------------~~~~~~~ll~~~~~---~~~------  179 (250)
                      .++++..     .+|+|||+||.                               |+.++.++++++.+   .+.      
T Consensus        82 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  161 (276)
T 1mxh_A           82 EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRN  161 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            7776521     48999999983                               23455667777665   334      


Q ss_pred             CEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecC
Q 025587          180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       180 ~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~  236 (250)
                      ++||++||...+.+...            ...|+++|...+            .++++++|+||.++++
T Consensus       162 g~iv~isS~~~~~~~~~------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          162 LSVVNLCDAMTDLPLPG------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             EEEEEECCGGGGSCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             cEEEEECchhhcCCCCC------------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            79999999887754221            256888774332            2799999999999998

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=1.5e-15  Score=131.95  Aligned_cols=144  Identities=18%  Similarity=0.164  Sum_probs=99.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcC---CceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA---GGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~D---~~~l~~  146 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.. ...   .+.++.+|   ++++.+
T Consensus        25 ~~k~vlVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~----l~~-~~~~~~~~~~~~~Dv~d~~~v~~   95 (297)
T 1xhl_A           25 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQ----ILK-AGVPAEKINAVVADVTEASGQDD   95 (297)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHH-TTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHh-cCCCCceEEEEecCCCCHHHHHH
Confidence            45899999    9999999999999999999999999987544322100    000 011   45566666   666666


Q ss_pred             hhcC-----CcccEEEeCCCc----------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCC
Q 025587          147 VVGG-----VTFDVVLDNNGK----------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag~----------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      +++.     .++|+|||+||.                      |+.++.+    +++.+++.+ ++||++||...+....
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~  174 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH  174 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC
T ss_pred             HHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC
Confidence            6652     148999999983                      2233344    444454556 8999999987664320


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                 +....|+++|...+            .++++++|+||.+.++.
T Consensus       175 -----------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          175 -----------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             -----------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence                       11256888774332            37999999999999875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.62  E-value=2.7e-16  Score=135.23  Aligned_cols=162  Identities=18%  Similarity=0.166  Sum_probs=107.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC-CCCCccc----ch--hcCCceEEeCC---HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-PPFNRFN----EI--VSAGGKTVWGD---PA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~~~----~~--~~~~v~~v~~D---~~  142 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....-.. .......    ++  ....+..+.+|   .+
T Consensus         9 ~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            9 QDKVVLVT----GGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            46899999    999999999999999999999999997432211000 0000000    01  12345566666   66


Q ss_pred             HHHhhhcCC-----cccEEEeCCCc------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCC
Q 025587          143 EVGNVVGGV-----TFDVVLDNNGK------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       143 ~l~~~l~~~-----~~d~Vi~~ag~------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.++++..     ++|+|||+||.                  |+.++.++++++...  +.++||++||...+......
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~  164 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP  164 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence            666666521     58999999992                  567788888888763  34699999998776543332


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      +..+..+.. ....|+++|...+.            +++++.|+||.|.++..+
T Consensus       165 ~~~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (287)
T 3pxx_A          165 PGAGGPQGP-GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN  217 (287)
T ss_dssp             C-----CHH-HHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTS
T ss_pred             ccccccCCC-ccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence            333322221 23568888843332            799999999999998754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.62  E-value=6.1e-16  Score=133.42  Aligned_cols=147  Identities=17%  Similarity=0.077  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         7 ~gk~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~   77 (280)
T 3tox_A            7 EGKIAIVT----GASSGIGRAAALLFAREGAKVVVTARNGNALAELTDE----IA-GGGGEAAALAGDVGDEALHEALVE   77 (280)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH----HT-TTTCCEEECCCCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEECCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432111    00 012234455555   667776665


Q ss_pred             C-----CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||.                     |+.++.+++++    +++.+.++||++||...+....    
T Consensus        78 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  153 (280)
T 3tox_A           78 LAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGF----  153 (280)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCC----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCC----
Confidence            2     148999999982                     34455555444    4556677999999987662111    


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                             +....|+++|...+.            ++++++|+||.+.++...
T Consensus       154 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  198 (280)
T 3tox_A          154 -------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANF  198 (280)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSG
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhh
Confidence                   113678888843332            699999999999998643

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.62  E-value=2.7e-16  Score=134.35  Aligned_cols=142  Identities=17%  Similarity=0.092  Sum_probs=101.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.       + ...+..+.+|   ++++.++++
T Consensus         5 ~~k~vlIT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~-~~~~~~~~~D~~~~~~v~~~~~   72 (263)
T 2a4k_A            5 SGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA-------L-EAEAIAVVADVSDPKAVEAVFA   72 (263)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------C-CSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------h-cCceEEEEcCCCCHHHHHHHHH
Confidence            35799999    9999999999999999999999999987554432111       0 1245555666   666766665


Q ss_pred             CC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCCCCccCC
Q 025587          150 GV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      ..     ++|+|||+||                    +|+.++.++++++...-  .++||++||...+ ...       
T Consensus        73 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~-------  144 (263)
T 2a4k_A           73 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF-------  144 (263)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH-------
T ss_pred             HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC-------
Confidence            31     4899999998                    25667777777776532  4699999998876 211       


Q ss_pred             CCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          203 DVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                           ....|+.+|..            .+.++++++++||.+.++...
T Consensus       145 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  188 (263)
T 2a4k_A          145 -----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA  188 (263)
T ss_dssp             -----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT
T ss_pred             -----CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhh
Confidence                 12456655532            223799999999999998643

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=6.5e-16  Score=132.85  Aligned_cols=145  Identities=22%  Similarity=0.190  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcC---CceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA---GGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~---~v~~v~~D---~~~l~~  146 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.. ...   .+.++.+|   ++++.+
T Consensus         5 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            5 SNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQI----ILK-SGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHT-TTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHH-cCCCCcceEEEEecCCCHHHHHH
Confidence            45899999    9999999999999999999999999987544322100    000 011   45566666   666666


Q ss_pred             hhcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHH----hCCCCEEEEEcCcccccC
Q 025587          147 VVGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAK----SSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~----~~~~~~~v~iSS~~vy~~  193 (250)
                      +++.     .++|+|||+||.                        |+.++.++++++.    +.+ ++||++||...+..
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~  154 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQ  154 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCC
Confidence            6642     148999999983                        3344555555543    345 89999999876643


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ..           +....|+++|...+            .++++++|+||.++++..
T Consensus       155 ~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (280)
T 1xkq_A          155 AQ-----------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT  200 (280)
T ss_dssp             CC-----------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHH
T ss_pred             CC-----------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcc
Confidence            20           11266888774332            379999999999999853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.62  E-value=8.5e-16  Score=133.74  Aligned_cols=145  Identities=18%  Similarity=0.156  Sum_probs=102.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+.++.+|   .+++.+++
T Consensus        29 l~gk~vlVT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~d~~~v~~~~   99 (301)
T 3tjr_A           29 FDGRAAVVT----GGASGIGLATATEFARRGARLVLSDVDQPALEQAVNG----LR-GQGFDAHGVVCDVRHLDEMVRLA   99 (301)
T ss_dssp             STTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCceEEEEccCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987654432110    00 012345566666   66676666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCC
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +..     ++|+|||+||.                    |+.++.++++++    ++.+ .++||++||...+.+...  
T Consensus       100 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  177 (301)
T 3tjr_A          100 DEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG--  177 (301)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC--
Confidence            521     58999999992                    455666666554    4444 579999999876643221  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+.            ++++++|+||.+.++.
T Consensus       178 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  218 (301)
T 3tjr_A          178 ----------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL  218 (301)
T ss_dssp             ----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc
Confidence                      3678888853332            6999999999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.62  E-value=1e-15  Score=131.66  Aligned_cols=145  Identities=16%  Similarity=0.191  Sum_probs=101.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    + ......+..+.+|   .+++.+++
T Consensus        31 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           31 LRGRTALVT----GSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQR----I-IASGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             CTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHH----H-HHTTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----H-HhcCCeEEEEEecCCCHHHHHHHH
Confidence            356899999    9999999999999999999999999987665432111    0 0012345566666   55555555


Q ss_pred             cC----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          149 GG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       149 ~~----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +.    .++|++||+||.                    |+.++.++++++    ++.+.++||++||...+.+..     
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-----  176 (275)
T 4imr_A          102 ERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS-----  176 (275)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-----
Confidence            42    258999999992                    455555555554    556678999999987664211     


Q ss_pred             CCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                             ....|+++|...+.            +++++.|+||.+.++.
T Consensus       177 -------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  218 (275)
T 4imr_A          177 -------VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR  218 (275)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             -------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence                   12558888843332            6999999999998874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.62  E-value=6e-16  Score=131.27  Aligned_cols=141  Identities=16%  Similarity=0.141  Sum_probs=94.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC---
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG---  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~---  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+     +.. ....+..+  |.+++.++++.   
T Consensus         1 Mk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----l~~-~~~~~~~~--d~~~v~~~~~~~~~   68 (254)
T 1zmt_A            1 MSTAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-----FAE-TYPQLKPM--SEQEPAELIEAVTS   68 (254)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-----HHH-HCTTSEEC--CCCSHHHHHHHHHH
T ss_pred             CeEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HHh-cCCcEEEE--CHHHHHHHHHHHHH
Confidence            3689999    999999999999999999999999998755432210     000 11122222  64444444431   


Q ss_pred             --CcccEEEeCCCc---------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          151 --VTFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       151 --~~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                        .++|+|||+||.                     |+.++.+++++    +++.+.++||++||...+....        
T Consensus        69 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  140 (254)
T 1zmt_A           69 AYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK--------  140 (254)
T ss_dssp             HHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT--------
T ss_pred             HhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC--------
Confidence              148999999983                     23344444444    4455678999999987664321        


Q ss_pred             CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                          ....|+++|...+            .++++++++||.++|+..
T Consensus       141 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~  183 (254)
T 1zmt_A          141 ----ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDS  183 (254)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTC
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccc
Confidence                1266888874332            279999999999987754

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.61  E-value=1.8e-15  Score=126.56  Aligned_cols=146  Identities=18%  Similarity=0.087  Sum_probs=101.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   ++++.++++.
T Consensus         2 ~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (235)
T 3l77_A            2 MKVAVIT----GASRGIGEAIARALARDGYALALGARSVDRLEKIAHE----LMQEQGVEVFYHHLDVSKAESVEEFSKK   73 (235)
T ss_dssp             CCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHCC-
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCeEEEEEeccCCHHHHHHHHHH
Confidence            5789999    9999999999999999999999999987554432111    000123345566666   7788877764


Q ss_pred             C-----cccEEEeCCC--------------------cCHHhHHHHHHHHHh---CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 V-----TFDVVLDNNG--------------------KNLDAVRPVADWAKS---SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      .     ++|+|||+||                    +|+.++.++++++..   .+.+++|+++|...+....       
T Consensus        74 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------  146 (235)
T 3l77_A           74 VLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP-------  146 (235)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT-------
T ss_pred             HHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC-------
Confidence            2     5899999999                    245566666666543   2345778777765443221       


Q ss_pred             CCCCCCCChhHHHHHHHHh----------CCcEEEEecCeeecCCCC
Q 025587          203 DVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~~~  239 (250)
                           ....|+++|...+.          +++++.++||.+..+...
T Consensus       147 -----~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~  188 (235)
T 3l77_A          147 -----YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGG  188 (235)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTT
T ss_pred             -----CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccc
Confidence                 12568888854432          699999999999887644

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.61  E-value=1.8e-16  Score=135.55  Aligned_cols=144  Identities=22%  Similarity=0.255  Sum_probs=102.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +... ....+..+.+|   .+.+.+++
T Consensus         9 ~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (267)
T 3t4x_A            9 KGKTALVT----GSTAGIGKAIATSLVAEGANVLINGRREENVNETIKE----IRAQYPDAILQPVVADLGTEQGCQDVI   80 (267)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHCTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhCCCceEEEEecCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    0000 01234455555   67777776


Q ss_pred             cCC-cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          149 GGV-TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       149 ~~~-~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      +.. ++|++||+||.                    |+.+    ++.+++.+++.+.++||++||...+.+...       
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  153 (267)
T 3t4x_A           81 EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE-------  153 (267)
T ss_dssp             HHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT-------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc-------
Confidence            532 58999999992                    3445    555566666677789999999887644322       


Q ss_pred             CCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecC
Q 025587          204 VVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGS  236 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~  236 (250)
                           ...|+++|...+.            +++++.++||.+.++
T Consensus       154 -----~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          154 -----MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence                 3679888854432            489999999999876

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.61  E-value=8.5e-16  Score=130.88  Aligned_cols=144  Identities=17%  Similarity=0.157  Sum_probs=98.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~~   76 (262)
T 1zem_A            6 NGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEAS----VR-EKGVEARSYVCDVTSEEAVIGTVD   76 (262)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-TTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    00 012245556666   666666654


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                     |+.++.+++++    +++.+.++||++||...+.....   
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  153 (262)
T 1zem_A           77 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN---  153 (262)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC---
Confidence            21     48999999983                     34444445444    44456789999999876643221   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...            ..++++++|+||.+..+.
T Consensus       154 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (262)
T 1zem_A          154 ---------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF  194 (262)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence                     25688887332            237999999999998764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.61  E-value=2.9e-15  Score=127.38  Aligned_cols=149  Identities=14%  Similarity=0.101  Sum_probs=102.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      .++|+||||    ||+|+||++++++|+++|   ++|++++|+.+..+.+.+     +. .....+.++.+|   .+++.
T Consensus        19 ~~~k~vlIT----GasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-----l~-~~~~~~~~~~~Dl~~~~~v~   88 (267)
T 1sny_A           19 SHMNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-----LA-KNHSNIHILEIDLRNFDAYD   88 (267)
T ss_dssp             -CCSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-----HH-HHCTTEEEEECCTTCGGGHH
T ss_pred             CCCCEEEEE----CCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-----hh-ccCCceEEEEecCCChHHHH
Confidence            346799999    999999999999999999   999999998765432210     00 012346666666   66666


Q ss_pred             hhhcCC-------cccEEEeCCCc---------------------CHHhHHHHHHHHHh----C------C-----CCEE
Q 025587          146 NVVGGV-------TFDVVLDNNGK---------------------NLDAVRPVADWAKS----S------G-----VKQF  182 (250)
Q Consensus       146 ~~l~~~-------~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~----~------~-----~~~~  182 (250)
                      ++++..       ++|+|||+||.                     |+.++.++++++.+    .      +     .++|
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  168 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAI  168 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEE
T ss_pred             HHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceE
Confidence            666521       48999999982                     34456666666543    2      2     5799


Q ss_pred             EEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          183 LFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       183 v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      |++||...+.....         .+....|+.+|...+            .+++++++|||.|.++...
T Consensus       169 v~isS~~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  228 (267)
T 1sny_A          169 INMSSILGSIQGNT---------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  228 (267)
T ss_dssp             EEECCGGGCSTTCC---------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             EEEecccccccCCC---------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence            99999887654321         011256887774432            2699999999999887653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.61  E-value=1e-15  Score=129.65  Aligned_cols=146  Identities=18%  Similarity=0.121  Sum_probs=99.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ..+|+||||    ||+|+||++++++|+++|++|+++++ +.+......+.    + ......+..+.+|   .+++.++
T Consensus        11 ~~~k~vlIT----Gas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~Dv~~~~~v~~~   81 (256)
T 3ezl_A           11 MSQRIAYVT----GGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLED----Q-KALGFDFYASEGNVGDWDSTKQA   81 (256)
T ss_dssp             --CEEEEET----TTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHH----H-HHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----H-HhcCCeeEEEecCCCCHHHHHHH
Confidence            456899999    99999999999999999999999884 44332211100    0 0112345566666   6666666


Q ss_pred             hcCC-----cccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGV-----TFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++..     ++|+|||+||.                    |+.+    ++.+++.+++.+.++||++||...+.....  
T Consensus        82 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  159 (256)
T 3ezl_A           82 FDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG--  159 (256)
T ss_dssp             HHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC--
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC--
Confidence            6521     58999999992                    4455    444455556667789999999876644322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+++|...+            .++++++++||.+.++..
T Consensus       160 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  201 (256)
T 3ezl_A          160 ----------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV  201 (256)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             ----------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccc
Confidence                      267888885332            268999999999988753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.61  E-value=2.1e-15  Score=129.18  Aligned_cols=147  Identities=17%  Similarity=0.186  Sum_probs=103.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    + ......+.++.+|   .+++.++++
T Consensus        33 ~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~~~~~Dl~~~~~~~~~~~  103 (279)
T 3ctm_A           33 KGKVASVT----GSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHL----Q-KTYGVHSKAYKCNISDPKSVEETIS  103 (279)
T ss_dssp             TTCEEEET----TTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHH----H-HHHCSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----H-HhcCCcceEEEeecCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987544322110    0 0012345666666   666766665


Q ss_pred             C-----CcccEEEeCCCc----------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          150 G-----VTFDVVLDNNGK----------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~----------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      .     .++|+|||+||.                      |+.+    ++.+++.+++.+.++||++||...+....   
T Consensus       104 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  180 (279)
T 3ctm_A          104 QQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI---  180 (279)
T ss_dssp             HHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----
T ss_pred             HHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC---
Confidence            3     248999999983                      2233    56788888877889999999987553310   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                             .+....|+++|...+.            + ++++++||.+.++...
T Consensus       181 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          181 -------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             -------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence                   1113568888755443            4 8999999999988653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.61  E-value=6.8e-16  Score=130.66  Aligned_cols=142  Identities=15%  Similarity=0.101  Sum_probs=100.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCc--cccCCCCCCCcccch-hcCCceEEeCC---H-HHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDEN--SDKMKKPPFNRFNEI-VSAGGKTVWGD---P-AEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~--~~~~~~~~~~~~~~~-~~~~v~~v~~D---~-~~l  144 (250)
                      ++|+||||    ||+|+||++++++|+++|++ |++++|+.+.  .+.+        ... ...++.++.+|   + +++
T Consensus         4 ~~k~vlVt----Gas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l--------~~~~~~~~~~~~~~D~~~~~~~~   71 (254)
T 1sby_A            4 TNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL--------KAINPKVNITFHTYDVTVPVAES   71 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHH--------HHHCTTSEEEEEECCTTSCHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHH--------HHhCCCceEEEEEEecCCChHHH
Confidence            35799999    99999999999999999997 9999998632  1111        000 12245566666   4 666


Q ss_pred             HhhhcC-----CcccEEEeCCC------------cCHHhHHHHHHHHHh----CC---CCEEEEEcCcccccCCCCCCcc
Q 025587          145 GNVVGG-----VTFDVVLDNNG------------KNLDAVRPVADWAKS----SG---VKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       145 ~~~l~~-----~~~d~Vi~~ag------------~~~~~~~~ll~~~~~----~~---~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .++++.     .++|+|||+||            +|+.++.++++++.+    .+   .++||++||...|.....    
T Consensus        72 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  147 (254)
T 1sby_A           72 KKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ----  147 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC----
Confidence            666652     14899999999            356677777776653    22   468999999887754221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+.+|...+            .++++++++||.+.++..
T Consensus       148 --------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~  189 (254)
T 1sby_A          148 --------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV  189 (254)
T ss_dssp             --------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHH
T ss_pred             --------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccc
Confidence                    256887774332            379999999999999853

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.61  E-value=5e-16  Score=133.26  Aligned_cols=145  Identities=17%  Similarity=0.149  Sum_probs=102.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.+++
T Consensus        26 l~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~d~~~v~~~~   96 (270)
T 3ftp_A           26 LDKQVAIVT----GASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA----FK-QAGLEGRGAVLNVNDATAVDALV   96 (270)
T ss_dssp             TTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HH-HHTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCcEEEEEEeCCCHHHHHHHH
Confidence            346899999    9999999999999999999999999987544322110    00 012244555555   66676666


Q ss_pred             cCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+.....   
T Consensus        97 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  173 (270)
T 3ftp_A           97 ESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG---  173 (270)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC---
Confidence            521     5899999999                    2455666666555    3456679999999876654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .++++++++||.|.++.
T Consensus       174 ---------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  214 (270)
T 3ftp_A          174 ---------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM  214 (270)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence                     267888885332            26999999999998874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.61  E-value=1.1e-15  Score=129.62  Aligned_cols=143  Identities=17%  Similarity=0.134  Sum_probs=101.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      |+|++|||    ||+|+||++++++|+++|  +.|++++|+.+..+.+.+        .....+.++.+|   .+++.++
T Consensus         1 Mgk~~lVT----Gas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~   68 (254)
T 3kzv_A            1 MGKVILVT----GVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE--------KYGDRFFYVVGDITEDSVLKQL   68 (254)
T ss_dssp             -CCEEEEC----STTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHH--------HHGGGEEEEESCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHH--------HhCCceEEEECCCCCHHHHHHH
Confidence            46899999    999999999999999985  789888998755443211        113345666666   6666666


Q ss_pred             hcCC-----cccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++..     ++|++||+||.                     |+.++.++++++    ++.+ ++||++||...+....  
T Consensus        69 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~--  145 (254)
T 3kzv_A           69 VNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFS--  145 (254)
T ss_dssp             HHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSC--
T ss_pred             HHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCC--
Confidence            6532     58999999993                     445555555555    5555 7999999987654322  


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh----------CCcEEEEecCeeecCCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~~~~  240 (250)
                                ....|+++|...+.          +++++.++||.+.++....
T Consensus       146 ----------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~  188 (254)
T 3kzv_A          146 ----------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVN  188 (254)
T ss_dssp             ----------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCC
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHH
Confidence                      13678888854332          6999999999999987543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.61  E-value=1.4e-15  Score=130.69  Aligned_cols=143  Identities=19%  Similarity=0.234  Sum_probs=99.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|.++ .+...       .++.  ...+..+.+|   .+++.+
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~-------~~~~~~~~~~~~~~~Dv~d~~~v~~   96 (273)
T 3uf0_A           29 LAGRTAVVT----GAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVA-------DEIADGGGSAEAVVADLADLEGAAN   96 (273)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHH-------HHHHTTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHH-------HHHHhcCCcEEEEEecCCCHHHHHH
Confidence            346899999    99999999999999999999999997642 21110       0111  2235566666   555555


Q ss_pred             hhcC----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCC
Q 025587          147 VVGG----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       147 ~l~~----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.+.    .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....  
T Consensus        97 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--  174 (273)
T 3uf0_A           97 VAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--  174 (273)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--
T ss_pred             HHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--
Confidence            5321    258999999992                    455665555544    5567789999999887644322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+++|...+            .++++++|+||.|+++..
T Consensus       175 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (273)
T 3uf0_A          175 ----------VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANT  216 (273)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             ----------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCch
Confidence                      267888884333            369999999999998854

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.61  E-value=2.9e-15  Score=128.96  Aligned_cols=145  Identities=18%  Similarity=0.083  Sum_probs=101.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.. +.+.+.    +. .....+.++.+|   .+++.+++
T Consensus        28 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~D~~~~~~~~~~~   98 (283)
T 1g0o_A           28 EGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA----IK-KNGSDAACVKANVGVVEDIVRMF   98 (283)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH----HH-HhCCCeEEEEcCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999986431 111000    00 012245556666   66666655


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.     .++|+|||+||                    +|+.++.++++++.+.  +.++||++||...+.....     
T Consensus        99 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  173 (283)
T 1g0o_A           99 EEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-----  173 (283)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-----
Confidence            42     14899999998                    2566788888888764  5679999999775532211     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                            ....|+++|...+            .++++++|+||.+.++.
T Consensus       174 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  215 (283)
T 1g0o_A          174 ------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM  215 (283)
T ss_dssp             ------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence                  1256888874332            37999999999998874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.61  E-value=1e-15  Score=128.52  Aligned_cols=140  Identities=15%  Similarity=0.134  Sum_probs=99.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+        ....++..+.+|   .+++.++++.
T Consensus         3 ~k~vlVT----Gas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~v~~~~~~   70 (235)
T 3l6e_A            3 LGHIIVT----GAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL--------LLGNAVIGIVADLAHHEDVDVAFAA   70 (235)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhcCCceEEECCCCCHHHHHHHHHH
Confidence            4789999    999999999999999999999999998755443211        112245666666   6666666643


Q ss_pred             C-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 V-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 ~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     .+|+|||+||.                    |+.++..+++++    ++.+ ++||++||...+....      
T Consensus        71 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~------  143 (235)
T 3l6e_A           71 AVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKA------  143 (235)
T ss_dssp             HHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCS------
T ss_pred             HHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCC------
Confidence            1     58999999992                    455665555554    3434 3999999977554321      


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                            ....|+++|...+.            +++++.++||.+..+..
T Consensus       144 ------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  186 (235)
T 3l6e_A          144 ------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFW  186 (235)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-
T ss_pred             ------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcch
Confidence                  12678888854432            58999999999988753

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.61  E-value=9.4e-15  Score=123.41  Aligned_cols=139  Identities=17%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|++|||    ||++.||++++++|+++|++|++.+|+.+..+...           ...+..+.+|   +++++++++
T Consensus        10 ~GK~alVT----Gas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~   74 (242)
T 4b79_A           10 AGQQVLVT----GGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFE   74 (242)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHH
Confidence            47999999    99999999999999999999999999887655322           1234444444   777877775


Q ss_pred             CC-cccEEEeCCCc------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          150 GV-TFDVVLDNNGK------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      .. ++|++|||||+                  |+.+    ++.++..+++.+ ++||++||...+.....          
T Consensus        75 ~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~----------  143 (242)
T 4b79_A           75 ALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSAD----------  143 (242)
T ss_dssp             HCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSS----------
T ss_pred             hcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCC----------
Confidence            42 59999999992                  3333    455566665544 79999999765433221          


Q ss_pred             CCCChhHHHHH------------HHHhCCcEEEEecCeeecCCCC
Q 025587          207 PDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       207 ~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                        ...|.++|.            +...+|+++.|.||.|..|...
T Consensus       144 --~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~  186 (242)
T 4b79_A          144 --RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGA  186 (242)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC---
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhh
Confidence              367888883            2233799999999999988643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.61  E-value=4.3e-15  Score=126.02  Aligned_cols=142  Identities=18%  Similarity=0.215  Sum_probs=99.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      |.|+||||    ||++.||++++++|+++|++|++++|+++...++.+.         ..++..+.+|   +++++++++
T Consensus         1 MnK~vlVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~   67 (247)
T 3ged_A            1 MNRGVIVT----GGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVE   67 (247)
T ss_dssp             -CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHH
Confidence            56899999    9999999999999999999999999987655443322         1234455555   666666654


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||                    +|+.+    ++.+++.+++.+ +++|++||...+.....    
T Consensus        68 ~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~----  142 (247)
T 3ged_A           68 YAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPD----  142 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCC----
Confidence            2     25999999998                    23444    455556666655 79999999875543222    


Q ss_pred             CCCCCCCCCChhHHHHHHH---------Hh--CCcEEEEecCeeecCCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------EN--FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e~--~~~~~ilRp~~i~G~~~~~  240 (250)
                              ...|+++|...         |.  +++++.|.||.|-.+....
T Consensus       143 --------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~  185 (247)
T 3ged_A          143 --------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE  185 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH
Confidence                    36788888332         22  6999999999998776543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.61  E-value=2.7e-15  Score=129.04  Aligned_cols=148  Identities=18%  Similarity=0.158  Sum_probs=102.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus        31 ~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dl~d~~~v~~~~~  101 (276)
T 3r1i_A           31 SGKRALIT----GASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADE----IA-GVGGKALPIRCDVTQPDQVRGMLD  101 (276)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH----HH-HTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-hcCCeEEEEEcCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987655432111    00 012345566666   677777765


Q ss_pred             CC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 GV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ++|+|||+||.                    |+.++.++++++    ++.+ .++||++||...+.....   
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~---  178 (276)
T 3r1i_A          102 QMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP---  178 (276)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC---
Confidence            31     58999999992                    455555555554    3334 378999999775533211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                             +....|+++|...+            .+++++.|+||.|.++...
T Consensus       179 -------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  223 (276)
T 3r1i_A          179 -------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE  223 (276)
T ss_dssp             -------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTG
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc
Confidence                   01266888884333            3699999999999998654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.61  E-value=1.1e-15  Score=130.81  Aligned_cols=145  Identities=18%  Similarity=0.159  Sum_probs=98.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   .+++.++++
T Consensus         3 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dv~d~~~v~~~~~   73 (264)
T 3tfo_A            3 MDKVILIT----GASGGIGEGIARELGVAGAKILLGARRQARIEAIATE----IR-DAGGTALAQVLDVTDRHSVAAFAQ   73 (264)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHHHH
Confidence            45899999    9999999999999999999999999987554432111    00 012234455555   666666664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHhHH----HHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDAVR----PVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~~~----~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|+|||+||.                    |+.++.    .+++.+++.+.++||++||...+.....    
T Consensus        74 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----  149 (264)
T 3tfo_A           74 AAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT----  149 (264)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC----
Confidence            2     158999999992                    444544    4445555567789999999876644222    


Q ss_pred             CCCCCCCCCChhHHHHHHHHh----------CCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~~  238 (250)
                              ...|+++|...+.          +++++.|+||.|.++..
T Consensus       150 --------~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~  189 (264)
T 3tfo_A          150 --------AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELA  189 (264)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----
T ss_pred             --------ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccc
Confidence                    2678888843322          68999999999988764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.61  E-value=1.3e-15  Score=130.12  Aligned_cols=145  Identities=13%  Similarity=0.081  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.. .....+..+.+|   .+++.+++
T Consensus         7 ~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dv~~~~~v~~~~   78 (265)
T 3lf2_A            7 SEAVAVVT----GGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESA----LRQRFPGARLFASVCDVLDALQVRAFA   78 (265)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCceEEEEeCCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987554422110    000 011135566666   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|++||+||                    +|+.++.++++++    ++.+.++||++||...+.....   
T Consensus        79 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  155 (265)
T 3lf2_A           79 EACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH---  155 (265)
T ss_dssp             HHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC---
Confidence            42     15899999999                    2455666665555    4456779999999876643221   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+.            +++++.|+||.+.++.
T Consensus       156 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  196 (265)
T 3lf2_A          156 ---------MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ  196 (265)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ---------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence                     3678888843332            6999999999998874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.60  E-value=6.6e-16  Score=132.01  Aligned_cols=145  Identities=20%  Similarity=0.199  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   ++++.++++
T Consensus        19 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           19 DGKRALIT----GATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA----LGEQFGTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    001123356666666   666666554


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|+|||+||                    +|+.++.++++++    ++.+ .++||++||...+.....   
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  167 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD---  167 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC---
Confidence            2     15899999999                    2455555555554    3333 469999999887644322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+            .+++++.|+||.|.++.
T Consensus       168 ---------~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  208 (266)
T 4egf_A          168 ---------HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM  208 (266)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred             ---------ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence                     267888884333            26999999999998874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.60  E-value=5.8e-15  Score=127.21  Aligned_cols=143  Identities=14%  Similarity=0.101  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+.+..+.+        .++.  ...+.++.+|   ++++.
T Consensus        20 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~l~~~~~~~~~~~~Dl~~~~~v~   87 (285)
T 2p91_A           20 EGKRALIT----GVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRV--------REIAKGFGSDLVVKCDVSLDEDIK   87 (285)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH--------HHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHH--------HHHHHhcCCeEEEEcCCCCHHHHH
Confidence            45799999    999  9999999999999999999999986311110        1111  0124455555   66776


Q ss_pred             hhhcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHhC---CCCEEEEEcCcccccC
Q 025587          146 NVVGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKSS---GVKQFLFISSAGIYKP  193 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy~~  193 (250)
                      ++++.     .++|+|||+||.                        |+.++.++++++...   +.++||++||...+..
T Consensus        88 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~  167 (285)
T 2p91_A           88 NLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV  167 (285)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC
Confidence            66652     158999999983                        344677777777663   2379999999776543


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|+++|...+            .++++++|+||.++++...
T Consensus       168 ~~~------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  213 (285)
T 2p91_A          168 VPH------------YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAY  213 (285)
T ss_dssp             CTT------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC-
T ss_pred             CCC------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhh
Confidence            211            256887774332            2699999999999998754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.60  E-value=2.6e-15  Score=129.96  Aligned_cols=146  Identities=18%  Similarity=0.184  Sum_probs=104.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC---eEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEV  144 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l  144 (250)
                      .++|+||||    ||+|+||++++++|+++|+   +|++++|+.+..+.+.+.    +... ....+.++.+|   ++++
T Consensus        31 l~~k~~lVT----Gas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dv~d~~~v  102 (287)
T 3rku_A           31 LAKKTVLIT----GASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKT----IDQEFPNAKVHVAQLDITQAEKI  102 (287)
T ss_dssp             HTTCEEEEE----STTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH----HHHHCTTCEEEEEECCTTCGGGH
T ss_pred             cCCCEEEEe----cCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHH----HHhhCCCCeEEEEECCCCCHHHH
Confidence            356899999    9999999999999999998   999999987654432111    0000 12345556665   7778


Q ss_pred             HhhhcCC-----cccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCC
Q 025587          145 GNVVGGV-----TFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       145 ~~~l~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~  194 (250)
                      .++++..     ++|+|||+||.                     |+.++.++++++    ++.+.++||++||...+...
T Consensus       103 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          103 KPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             HHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC
Confidence            8777643     59999999992                     445555555554    55677899999998765432


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      ..            ...|+++|...+            .+++++.|+||.|.++.
T Consensus       183 ~~------------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          183 PT------------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             TT------------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             CC------------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence            21            267888884433            26999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.60  E-value=1.3e-15  Score=132.11  Aligned_cols=145  Identities=19%  Similarity=0.106  Sum_probs=102.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC--ccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+  ..+.+.+.     .......+.++.+|   .+++.+
T Consensus        47 l~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           47 LKDRKALVT----GGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKAL-----IEECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH-----HHHTTCCEEECCCCTTSHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHH-----HHHcCCcEEEEEecCCCHHHHHH
Confidence            356899999    99999999999999999999999988742  11111000     00112344555555   666666


Q ss_pred             hhcC-----CcccEEEeCCC---------------------cCHHhHHHHHHHHHhCCC--CEEEEEcCcccccCCCCCC
Q 025587          147 VVGG-----VTFDVVLDNNG---------------------KNLDAVRPVADWAKSSGV--KQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~~~--~~~v~iSS~~vy~~~~~~~  198 (250)
                      +++.     .++|+|||+||                     +|+.++.++++++...-.  ++||++||...+.....  
T Consensus       118 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--  195 (294)
T 3r3s_A          118 LVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--  195 (294)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC--
Confidence            6542     15899999999                     256678888888876432  49999999987764322  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+            .++++++|+||.|+++.
T Consensus       196 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          196 ----------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence                      266888885332            27999999999999875

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.60  E-value=2.6e-15  Score=127.85  Aligned_cols=145  Identities=17%  Similarity=0.134  Sum_probs=104.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+++..++..+.    +. -....+..+.+|   +++++++++
T Consensus         6 ~gKvalVT----Gas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~----i~-~~g~~~~~~~~Dvt~~~~v~~~~~   76 (254)
T 4fn4_A            6 KNKVVIVT----GAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE----LR-GMGKEVLGVKADVSKKKDVEEFVR   76 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999988665533211    00 112345556666   667666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++|||||+                     |+    ..++.+++.+++.+-++||++||...+....    
T Consensus        77 ~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~----  152 (254)
T 4fn4_A           77 RTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF----  152 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS----
T ss_pred             HHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC----
Confidence            2     259999999982                     23    3467777777777778999999976543321    


Q ss_pred             cCCCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|.++|.            +...+|+++.|.||.|-.+..
T Consensus       153 --------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  195 (254)
T 4fn4_A          153 --------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG  195 (254)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCT
T ss_pred             --------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccc
Confidence                    1267888873            223379999999999988864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.60  E-value=5e-15  Score=124.73  Aligned_cols=134  Identities=18%  Similarity=0.131  Sum_probs=98.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|++ .|++|++++|..+...               ..+..+.+|   ++++.+++
T Consensus         3 ~~k~vlIT----Gas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~   63 (244)
T 4e4y_A            3 AMANYLVT----GGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------------ENLKFIKADLTKQQDITNVL   63 (244)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------------TTEEEEECCTTCHHHHHHHH
T ss_pred             CCCeEEEe----CCCChHHHHHHHHHHhcCCcEEEEecccccccc---------------ccceEEecCcCCHHHHHHHH
Confidence            46789999    9999999999999999 7899999998764211               123444444   67777666


Q ss_pred             c---CCcccEEEeCCC--------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCCCCccCCC
Q 025587          149 G---GVTFDVVLDNNG--------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       149 ~---~~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      +   ..++|+|||+||                    +|+.++.++++++...-  -++||++||...+.....       
T Consensus        64 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  136 (244)
T 4e4y_A           64 DIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN-------  136 (244)
T ss_dssp             HHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT-------
T ss_pred             HHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC-------
Confidence            4   226999999999                    25667888888876632  248999999887644222       


Q ss_pred             CCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                           ...|+++|...+            .++++++++||.+.++.
T Consensus       137 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          137 -----SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence                 267888874333            36999999999998874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.60  E-value=9.1e-16  Score=130.27  Aligned_cols=143  Identities=20%  Similarity=0.211  Sum_probs=94.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   .+++.++++
T Consensus         8 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~D~~~~~~~~~~~~   75 (261)
T 3n74_A            8 EGKVALIT----GAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG--------EIGDAALAVAADISKEADVDAAVE   75 (261)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHCTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH--------HhCCceEEEEecCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765443211        122345566666   666666665


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHhHHHHHHH----HHhCC----CCEEEEEcCcccccCCC
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDAVRPVADW----AKSSG----VKQFLFISSAGIYKPAD  195 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~----~~~~~----~~~~v~iSS~~vy~~~~  195 (250)
                      ..     ++|+|||+||.                     |+.++.+++++    +++.+    ..+||++||...+.+..
T Consensus        76 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  155 (261)
T 3n74_A           76 AALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP  155 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT
T ss_pred             HHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC
Confidence            31     58999999982                     34454444444    33322    45799999987654322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      .            ...|+++|...+            .+++++.++||.+.++...
T Consensus       156 ~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  199 (261)
T 3n74_A          156 N------------LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT  199 (261)
T ss_dssp             T------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             C------------ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh
Confidence            2            256888884333            2699999999999988643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.59  E-value=3.3e-15  Score=126.63  Aligned_cols=145  Identities=17%  Similarity=0.138  Sum_probs=99.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-----CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-----DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-----D~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+     |.+++.++
T Consensus        11 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~   82 (252)
T 3f1l_A           11 NDRIILVT----GASDGIGREAAMTYARYGATVILLGRNEEKLRQVASH----INEETGRQPQWFILDLLTCTSENCQQL   82 (252)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhhcCCCceEEEEecccCCHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    00111123444444     45666666


Q ss_pred             hcC-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|+|||+||.                     |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-  161 (252)
T 3f1l_A           83 AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN-  161 (252)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC-
Confidence            542     258999999983                     344555555554    6667789999999876543221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~  237 (250)
                                 ...|+++|...+.           .++++.++||.+..+.
T Consensus       162 -----------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~  201 (252)
T 3f1l_A          162 -----------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM  201 (252)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence                       2678888854432           2899999999997753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.59  E-value=1.2e-15  Score=130.51  Aligned_cols=147  Identities=17%  Similarity=0.164  Sum_probs=96.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++ .|+.+..+.+.+.    + ......+.++.+|   .+++.+++
T Consensus        25 ~~k~vlIT----Gas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~Dl~~~~~v~~~~   95 (272)
T 4e3z_A           25 DTPVVLVT----GGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAA----I-TESGGEAVAIPGDVGNAADIAAMF   95 (272)
T ss_dssp             CSCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHH----H-HhcCCcEEEEEcCCCCHHHHHHHH
Confidence            35789999    999999999999999999999887 4544333321110    0 0012345566666   66666666


Q ss_pred             cCC-----cccEEEeCCCc---------------------CHHhHHHHHHHHHhC-------CCCEEEEEcCcccccCCC
Q 025587          149 GGV-----TFDVVLDNNGK---------------------NLDAVRPVADWAKSS-------GVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~~-------~~~~~v~iSS~~vy~~~~  195 (250)
                      +..     ++|+|||+||.                     |+.++.++++++...       +.++||++||...+....
T Consensus        96 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  175 (272)
T 4e3z_A           96 SAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA  175 (272)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC
Confidence            532     58999999982                     455566666555432       356899999987654322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      .           ....|+++|...+.            ++++++++||.|+++...
T Consensus       176 ~-----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  220 (272)
T 4e3z_A          176 T-----------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHA  220 (272)
T ss_dssp             T-----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----
T ss_pred             C-----------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccc
Confidence            1           12558888854332            699999999999998654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.59  E-value=4.4e-15  Score=126.37  Aligned_cols=142  Identities=16%  Similarity=0.161  Sum_probs=100.0

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc--CCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+.+..+.+        .++..  ..+.++.+|   ++++.
T Consensus         7 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--------~~l~~~~~~~~~~~~D~~~~~~v~   74 (261)
T 2wyu_A            7 SGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA--------EKLAEALGGALLFRADVTQDEELD   74 (261)
T ss_dssp             TTCEEEEE----SCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHH--------HHHHHHTTCCEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH--------HHHHHhcCCcEEEECCCCCHHHHH
Confidence            45799999    999  9999999999999999999999986311110        11110  124556666   66777


Q ss_pred             hhhcCC-----cccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCC
Q 025587          146 NVVGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (250)
Q Consensus       146 ~~l~~~-----~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~  194 (250)
                      ++++..     ++|+|||+||.                        |+.++.++++++.+.  ..++||++||...+...
T Consensus        75 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  154 (261)
T 2wyu_A           75 ALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV  154 (261)
T ss_dssp             HHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC
Confidence            666531     58999999983                        344677788887764  12599999997765432


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      .            ....|+++|...+            .++++++++||.++++..
T Consensus       155 ~------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  198 (261)
T 2wyu_A          155 P------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAA  198 (261)
T ss_dssp             T------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGG
T ss_pred             C------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchh
Confidence            1            1256887774332            279999999999999864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.59  E-value=6.7e-15  Score=123.25  Aligned_cols=133  Identities=14%  Similarity=0.120  Sum_probs=95.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|+||||    ||+|+||++++++|+++|++|++++|+.+....               ....+.+|   ++++.++++.
T Consensus         3 ~k~vlIT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            3 SGKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------------SNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------------EEEECCTTSCHHHHHHHHHHH
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEecCcccccc---------------ccEEEeCCCCCHHHHHHHHHH
Confidence            4789999    999999999999999999999999998754321               12233444   6666665541


Q ss_pred             -------CcccEEEeCCCc---------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          151 -------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 -------~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                             .++|+|||+||.                     |+.++.++++++.+.  ..++||++||...+....     
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  138 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----  138 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----
T ss_pred             HHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC-----
Confidence                   259999999982                     345666667766552  235999999988764321     


Q ss_pred             CCCCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~  237 (250)
                             ....|+.+|...+              .++++++++||.+.++.
T Consensus       139 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  182 (236)
T 1ooe_A          139 -------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  182 (236)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence                   1366888774332              24899999999998874

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.59  E-value=1.8e-15  Score=128.27  Aligned_cols=146  Identities=14%  Similarity=0.089  Sum_probs=97.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~  146 (250)
                      .++|++|||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +...  ....+.++.+|   .+++.+
T Consensus         5 ~~~k~~lVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~   76 (250)
T 3nyw_A            5 KQKGLAIIT----GASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDE----IMRSNKHVQEPIVLPLDITDCTKADT   76 (250)
T ss_dssp             CCCCEEEEE----STTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHH----HHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHhccccCcceEEeccCCCHHHHHH
Confidence            346899999    9999999999999999999999999987654432110    0000  11345566666   666666


Q ss_pred             hhcC-----CcccEEEeCCCc-------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCC
Q 025587          147 VVGG-----VTFDVVLDNNGK-------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag~-------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +++.     .++|+|||+||.                   |+.++..++++    +++.+.++||++||...+.....  
T Consensus        77 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  154 (250)
T 3nyw_A           77 EIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD--  154 (250)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--
T ss_pred             HHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--
Confidence            6543     259999999993                   34454444444    45566789999999765432111  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                                ...|+++|...+            .+++++.++||.+.++.
T Consensus       155 ----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  195 (250)
T 3nyw_A          155 ----------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM  195 (250)
T ss_dssp             ----------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred             ----------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch
Confidence                      267888884332            26999999999998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.59  E-value=1.7e-15  Score=129.99  Aligned_cols=155  Identities=17%  Similarity=0.109  Sum_probs=102.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC-CCCCCCccc----c--hhcCCceEEeCC---HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFN----E--IVSAGGKTVWGD---PA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~~~----~--~~~~~v~~v~~D---~~  142 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+....- .......+.    .  .....+.++.+|   ++
T Consensus        12 ~gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A           12 TGKVAFIT----GAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            46899999    9999999999999999999999999874211100 000000000    0  112356666666   67


Q ss_pred             HHHhhhcC-----CcccEEEeCCCc----------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccccCCCC
Q 025587          143 EVGNVVGG-----VTFDVVLDNNGK----------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIYKPADE  196 (250)
Q Consensus       143 ~l~~~l~~-----~~~d~Vi~~ag~----------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.++++.     .++|+|||+||.                |+.++.++++++    ++.+ .++||++||...+.....
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  167 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS  167 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc
Confidence            77776652     158999999992                455666666654    3333 579999999876543211


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      .        .+....|+++|...+            .+++++.|+||.|.++...
T Consensus       168 ~--------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~  214 (278)
T 3sx2_A          168 A--------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN  214 (278)
T ss_dssp             S--------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             C--------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch
Confidence            0        111356888884433            2699999999999999765

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.59  E-value=2.1e-15  Score=129.99  Aligned_cols=147  Identities=19%  Similarity=0.203  Sum_probs=94.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+. +..+...+.    +. .....+.++.+|   ++++.++
T Consensus        27 ~~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~d~~~v~~~   97 (280)
T 4da9_A           27 KARPVAIVT----GGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAE----LS-GLGARVIFLRADLADLSSHQAT   97 (280)
T ss_dssp             CCCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHH----HH-HTTCCEEEEECCTTSGGGHHHH
T ss_pred             cCCCEEEEe----cCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH----HH-hcCCcEEEEEecCCCHHHHHHH
Confidence            456899999    9999999999999999999999999744 332221100    00 012345566666   6666666


Q ss_pred             hcCC-----cccEEEeCCCc----------------------CHHhHHHHHHHH----HhCC---CCEEEEEcCcccccC
Q 025587          148 VGGV-----TFDVVLDNNGK----------------------NLDAVRPVADWA----KSSG---VKQFLFISSAGIYKP  193 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~----------------------~~~~~~~ll~~~----~~~~---~~~~v~iSS~~vy~~  193 (250)
                      ++..     ++|+|||+||.                      |+.++.++++++    ++.+   .++||++||...+..
T Consensus        98 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  177 (280)
T 4da9_A           98 VDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT  177 (280)
T ss_dssp             HHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----
T ss_pred             HHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC
Confidence            6521     58999999983                      455555555444    4333   569999999876543


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|+++|...+            .+++++.++||.+.++...
T Consensus       178 ~~~------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  223 (280)
T 4da9_A          178 SPE------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA  223 (280)
T ss_dssp             --C------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             CCC------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh
Confidence            221            266888885433            2699999999999998654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.59  E-value=9.4e-15  Score=126.10  Aligned_cols=148  Identities=18%  Similarity=0.225  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+++.+.......++  ....+.++.+|   ++++.++
T Consensus         8 ~~k~vlVT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            8 RGKTMFIS----GGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46899999    999999999999999999999999999875544321100000111  12345566666   6666666


Q ss_pred             hcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHh----CCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKS----SGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~----~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++..     ++|++||+||                    +|+.++.++++++..    .+.++||++||...+....   
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  160 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW---  160 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC---
Confidence            6522     5899999999                    356677777776655    3567999999976443210   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCe-eec
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQY-MIG  235 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~-i~G  235 (250)
                              +....|+++|...+            .+++++.|+||. +-.
T Consensus       161 --------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          161 --------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             --------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc
Confidence                    11266888884333            369999999994 433

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.59  E-value=4.1e-15  Score=129.24  Aligned_cols=153  Identities=18%  Similarity=0.106  Sum_probs=102.1

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc-CCCCCCCccc----ch--hcCCceEEeCC---
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFN----EI--VSAGGKTVWGD---  140 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~-~~~~~~~~~~----~~--~~~~v~~v~~D---  140 (250)
                      ..++|++|||    ||+|+||++++++|+++|++|++++|+++.... +.......+.    ++  ....+..+.+|   
T Consensus        25 ~l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           25 KVEGKVAFIT----GAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             TTTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            3456899999    999999999999999999999999997432110 0000000000    11  12345566666   


Q ss_pred             HHHHHhhhcC-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhC-CCCEEEEEcCcc
Q 025587          141 PAEVGNVVGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSS-GVKQFLFISSAG  189 (250)
Q Consensus       141 ~~~l~~~l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~-~~~~~v~iSS~~  189 (250)
                      .+++.++++.     .++|+|||+||.                     |+.++..+++++    ++. +.++||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            6666666642     258999999992                     455555555554    333 367999999987


Q ss_pred             cccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       190 vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      .+.....            ...|+++|...+.            +++++.|+||.|.++...
T Consensus       181 ~~~~~~~------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  230 (299)
T 3t7c_A          181 GLRGAEN------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL  230 (299)
T ss_dssp             GTSCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred             hccCCCC------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence            6644322            2678888843332            699999999999998754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.58  E-value=2.3e-15  Score=129.86  Aligned_cols=147  Identities=17%  Similarity=0.162  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   ++++.++++
T Consensus        32 ~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           32 EGRIALVT----GGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGE----IGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             --CEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            56899999    9999999999999999999999999987554432111    000111123556665   666666664


Q ss_pred             CC-----cccEEEeCCCc---------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCcccccCCCCC
Q 025587          150 GV-----TFDVVLDNNGK---------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~  197 (250)
                      ..     ++|+|||+||.                     |+.+    ++.+++.+++.+  .++||++||...+..... 
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~-  182 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN-  182 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT-
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC-
Confidence            32     58999999983                     3344    444555555544  579999999876543221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+++|...+            .+++++.|+||.|.++...
T Consensus       183 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  225 (281)
T 4dry_A          183 -----------SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA  225 (281)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred             -----------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence                       367888884333            3699999999999988643

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.58  E-value=2.4e-15  Score=126.56  Aligned_cols=145  Identities=17%  Similarity=0.125  Sum_probs=99.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-----CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-----DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-----D~~~l~~~  147 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.........++..     |.+++.++
T Consensus        13 ~~k~vlIT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~d~d~~~~~~~~~~   84 (247)
T 3i1j_A           13 KGRVILVT----GAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQ----IKSAGQPQPLIIALNLENATAQQYREL   84 (247)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHH----HHhcCCCCceEEEeccccCCHHHHHHH
Confidence            46899999    9999999999999999999999999987554432110    00011123334433     45666665


Q ss_pred             hcC-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|+|||+||.                     |+.++.++++++    ++.+.++||++||...+..... 
T Consensus        85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-  163 (247)
T 3i1j_A           85 AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN-  163 (247)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC-
Confidence            542     158999999982                     455566665555    5566789999999776543221 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH-------------hCCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE-------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e-------------~~~~~~ilRp~~i~G~~  237 (250)
                                 ...|+++|...+             .+++++.++||.+..+.
T Consensus       164 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          164 -----------WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             -----------cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence                       267888874332             25889999999997753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.58  E-value=3.7e-15  Score=127.90  Aligned_cols=151  Identities=15%  Similarity=0.091  Sum_probs=100.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--CCCccc----ch--hcCCceEEeCC---
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFN----EI--VSAGGKTVWGD---  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~~~----~~--~~~~v~~v~~D---  140 (250)
                      ..+|++|||    ||+|+||++++++|+++|++|++++|..+........  ....+.    .+  ....+..+.+|   
T Consensus         9 l~~k~~lVT----Gas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            9 LEGRVAFIT----GAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cCCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            346899999    9999999999999999999999999853211100000  000000    01  12345566666   


Q ss_pred             HHHHHhhhcC-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCC-CCEEEEEcCccc
Q 025587          141 PAEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSG-VKQFLFISSAGI  190 (250)
Q Consensus       141 ~~~l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~-~~~~v~iSS~~v  190 (250)
                      .+++.++++.     .++|++||+||.                    |+.++.+++++    +++.+ .++||++||...
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  164 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG  164 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh
Confidence            6666666643     258999999992                    45555555554    44443 569999999876


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      +.....            ...|+++|...+            .+++++.++||.+.++..
T Consensus       165 ~~~~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  212 (277)
T 3tsc_A          165 MKMQPF------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG  212 (277)
T ss_dssp             TSCCSS------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG
T ss_pred             CCCCCC------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc
Confidence            644222            266888884333            269999999999998864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.58  E-value=9.8e-15  Score=122.70  Aligned_cols=134  Identities=12%  Similarity=0.068  Sum_probs=96.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+....               ....+.+|   ++++.++++
T Consensus         6 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------~~~~~~~D~~~~~~v~~~~~   66 (241)
T 1dhr_A            6 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------------ASVIVKMTDSFTEQADQVTA   66 (241)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------------EEEECCCCSCHHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---------------CcEEEEcCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998754321               12233344   666666665


Q ss_pred             C-------CcccEEEeCCCc---------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-------VTFDVVLDNNGK---------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-------~~~d~Vi~~ag~---------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .       .++|+|||+||.                     |+.++..+++++.+.  ..++||++||...+....    
T Consensus        67 ~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  142 (241)
T 1dhr_A           67 EVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----  142 (241)
T ss_dssp             HHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----
T ss_pred             HHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----
Confidence            2       259999999982                     345666677766552  126999999988765322    


Q ss_pred             cCCCCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~  237 (250)
                              ....|+++|...+              .++++++++||.+.++.
T Consensus       143 --------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~  186 (241)
T 1dhr_A          143 --------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM  186 (241)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred             --------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence                    1266888875332              35899999999998764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.58  E-value=4.4e-15  Score=130.77  Aligned_cols=146  Identities=16%  Similarity=0.057  Sum_probs=100.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-----hcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-----VSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-----~~~~v~~v~~D---~~~l~  145 (250)
                      +|+||||    ||+|+||++++++|+++|++|+++.|+.+..+...+.    +...     ....+.++.+|   .+++.
T Consensus         2 ~k~vlVT----Gas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   73 (327)
T 1jtv_A            2 RTVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL----WEAARALACPPGSLETLQLDVRDSKSVA   73 (327)
T ss_dssp             CEEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHH----HHHHHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHH----HHHhhhccCCCCceEEEEecCCCHHHHH
Confidence            4789999    9999999999999999999999998876443322100    0000     01345666666   77777


Q ss_pred             hhhcC---CcccEEEeCCC--------------------cCHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCC
Q 025587          146 NVVGG---VTFDVVLDNNG--------------------KNLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       146 ~~l~~---~~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++++.   ..+|+|||+||                    +|+.++.+++++    +++.+.++||++||...+....   
T Consensus        74 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~---  150 (327)
T 1jtv_A           74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---  150 (327)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT---
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC---
Confidence            77764   25999999998                    245566666665    4555778999999987654321   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ....|+++|...+            .++++++|+||.|.++...
T Consensus       151 ---------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~  194 (327)
T 1jtv_A          151 ---------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME  194 (327)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC----
T ss_pred             ---------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHh
Confidence                     1256888874433            3799999999999988643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.58  E-value=2.3e-15  Score=128.69  Aligned_cols=147  Identities=16%  Similarity=0.137  Sum_probs=100.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|.. +..+.....     .......+.++.+|   .+++.+++
T Consensus        24 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~~~~~v~~~~   94 (269)
T 3gk3_A           24 AKRVAFVT----GGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH-----ERDAGRDFKAYAVDVADFESCERCA   94 (269)
T ss_dssp             CCCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH-----HHTTTCCCEEEECCTTCHHHHHHHH
T ss_pred             cCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-----HHhcCCceEEEEecCCCHHHHHHHH
Confidence            46789999    9999999999999999999999998554 222211000     00012345666666   66666666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +..     ++|+|||+||.                    |+.++.+++++    +++.+.++||++||...+.....   
T Consensus        95 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  171 (269)
T 3gk3_A           95 EKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG---  171 (269)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC---
Confidence            521     58999999992                    44555555544    44456789999999876654322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                               ...|+++|...+            .++++++++||.+.++..+.
T Consensus       172 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  215 (269)
T 3gk3_A          172 ---------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA  215 (269)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC
T ss_pred             ---------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh
Confidence                     267888885332            26999999999999987543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.58  E-value=2.4e-15  Score=128.71  Aligned_cols=146  Identities=18%  Similarity=0.119  Sum_probs=99.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+.. +.+.+.    + ......+.++.+|   .+++.+++
T Consensus        28 ~~k~vlIT----Gas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~~~~~D~~~~~~v~~~~   98 (271)
T 4iin_A           28 TGKNVLIT----GASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNE----L-EEKGYKAAVIKFDAASESDFIEAI   98 (271)
T ss_dssp             SCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----H-HhcCCceEEEECCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999965322 211100    0 0112345566666   66666666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHhHHH----HHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDAVRP----VADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|+|||+||.                    |+.++.+    +++.+++.+.++||++||...+.+...   
T Consensus        99 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  175 (271)
T 4iin_A           99 QTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG---  175 (271)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC---
Confidence            42     158999999992                    3444444    445555567789999999876644322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+            .+++++.++||.+.++...
T Consensus       176 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  218 (271)
T 4iin_A          176 ---------QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA  218 (271)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---
T ss_pred             ---------chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh
Confidence                     267888885433            2689999999999988643

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.58  E-value=4e-15  Score=126.94  Aligned_cols=147  Identities=16%  Similarity=0.120  Sum_probs=101.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    ||+|+||++++++|+++|++|+++.+.. +..+...+.    + .....++.++.+|   .+++.++
T Consensus        24 l~~k~vlVT----Gas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~----l-~~~~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           24 AMSRSVLVT----GASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNA----I-VANGGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             -CCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH----H-HhcCCceEEEEecCCCHHHHHHH
Confidence            356899999    9999999999999999999998876543 222211000    0 0012345566666   6666666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHH-----hCCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAK-----SSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~-----~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     ..+|+|||+||                    +|+.++.++++++.     +.+.++||++||...+..... 
T Consensus        95 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-  173 (267)
T 4iiu_A           95 LEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG-  173 (267)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT-
T ss_pred             HHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC-
Confidence            652     15899999998                    24566667666652     456789999999876644322 


Q ss_pred             CccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|+++|...+            .++++++++||.+.++...
T Consensus       174 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  216 (267)
T 4iiu_A          174 -----------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE  216 (267)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred             -----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc
Confidence                       267888885322            2699999999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.57  E-value=7.5e-15  Score=125.62  Aligned_cols=147  Identities=16%  Similarity=0.114  Sum_probs=101.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|++|||    ||+|+||++++++|+++|++|++++++.+ ..+.+.+.    +. .....+..+.+|   .+++.++
T Consensus        16 l~~k~~lVT----Gas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~   86 (270)
T 3is3_A           16 LDGKVALVT----GSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSE----IK-ALGSDAIAIKADIRQVPEIVKL   86 (270)
T ss_dssp             CTTCEEEES----CTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHH
T ss_pred             cCCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCcEEEEEcCCCCHHHHHHH
Confidence            346899999    99999999999999999999999887652 22211100    00 012345566666   6677766


Q ss_pred             hcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCCCCcc
Q 025587          148 VGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ++..     ++|++||+||                    +|+.++.++++++...-  -++||++||.......      
T Consensus        87 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  160 (270)
T 3is3_A           87 FDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS------  160 (270)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC------
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC------
Confidence            6532     5899999999                    25667777777776632  3499999996522111      


Q ss_pred             CCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                           .+....|+++|...+            .+++++.|+||.+.++..
T Consensus       161 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  205 (270)
T 3is3_A          161 -----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF  205 (270)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTH
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence                 111367888884333            269999999999998864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.57  E-value=1.2e-14  Score=124.76  Aligned_cols=148  Identities=17%  Similarity=0.141  Sum_probs=101.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++++. +..+.+.+.    + ......+..+.+|   ++++.++
T Consensus        29 l~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----l-~~~~~~~~~~~~Dv~d~~~v~~~   99 (271)
T 3v2g_A           29 LAGKTAFVT----GGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE----I-EQAGGRAVAIRADNRDAEAIEQA   99 (271)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----H-HhcCCcEEEEECCCCCHHHHHHH
Confidence            456899999    9999999999999999999999997765 222211100    0 0012345556666   6777666


Q ss_pred             hcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          148 VGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ++..     ++|+|||+||                    +|+.++.++++++...  +.++||++||.......      
T Consensus       100 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~------  173 (271)
T 3v2g_A          100 IRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP------  173 (271)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC------
T ss_pred             HHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC------
Confidence            6521     5899999998                    2566777777777653  35699999985432211      


Q ss_pred             CCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                           .+....|+++|...+.            ++++++|+||.|.++...
T Consensus       174 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  219 (271)
T 3v2g_A          174 -----WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNP  219 (271)
T ss_dssp             -----STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSC
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccc
Confidence                 1113678888853332            699999999999998754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.57  E-value=1.4e-14  Score=124.08  Aligned_cols=143  Identities=14%  Similarity=0.108  Sum_probs=100.4

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc--CCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--AGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+.+ .+..       ..++..  ..+.++.+|   ++++.
T Consensus         5 ~~k~vlVT----Gas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            5 KGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKR-------VRPIAQELNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHH-------HHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHH-------HHHHHHhcCCcEEEEcCCCCHHHHH
Confidence            35799999    999  99999999999999999999999874 1110       011110  124555555   66676


Q ss_pred             hhhcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCC
Q 025587          146 NVVGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPA  194 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~  194 (250)
                      ++++.     .++|+|||+||.                        |+.++.++++++...  ..++||++||...+...
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence            66652     158999999983                        344677777887764  12699999997655332


Q ss_pred             CCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          195 DEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       195 ~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      .            ....|+++|...+.            ++++++++||.+.++...
T Consensus       153 ~------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  197 (275)
T 2pd4_A          153 A------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS  197 (275)
T ss_dssp             T------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred             C------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhh
Confidence            1            12568888743332            799999999999998643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.57  E-value=7.4e-15  Score=126.53  Aligned_cols=152  Identities=18%  Similarity=0.141  Sum_probs=101.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCC-----CCcccc----h--hcCCceEEeCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-----FNRFNE----I--VSAGGKTVWGD  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~-----~~~~~~----~--~~~~v~~v~~D  140 (250)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+.........     ...+.+    +  ....+..+.+|
T Consensus         9 l~~k~~lVT----Gas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            9 VEGKVAFVT----GAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             TTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             cCCCEEEEe----CCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            356899999    99999999999999999999999999743221110000     000000    1  12345566666


Q ss_pred             ---HHHHHhhhcC-----CcccEEEeCCCc---------------------CHHhHHHHHHHH----HhCC-CCEEEEEc
Q 025587          141 ---PAEVGNVVGG-----VTFDVVLDNNGK---------------------NLDAVRPVADWA----KSSG-VKQFLFIS  186 (250)
Q Consensus       141 ---~~~l~~~l~~-----~~~d~Vi~~ag~---------------------~~~~~~~ll~~~----~~~~-~~~~v~iS  186 (250)
                         ++++.++++.     .++|+|||+||.                     |+.++.++++++    ++.+ .++||++|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence               6677666642     158999999992                     445555555544    3333 56999999


Q ss_pred             CcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       187 S~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      |...+.....            ...|+++|...+            .+++++.|+||.|.++...
T Consensus       165 S~~~~~~~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  217 (286)
T 3uve_A          165 SVGGLKAYPH------------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH  217 (286)
T ss_dssp             CGGGTSCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred             chhhccCCCC------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence            9876644222            267888884332            3699999999999998754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.57  E-value=2.7e-14  Score=126.86  Aligned_cols=146  Identities=18%  Similarity=0.153  Sum_probs=100.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|+.+..+++...-.....++.  ...+..+.+|   ++++.++
T Consensus        44 ~gk~vlVT----Gas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           44 AGCTVFIT----GASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            46899999    9999999999999999999999999998765443221100011111  2234555666   6777766


Q ss_pred             hcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++..     ++|+|||+||                    +|+.++.++++++    ++.+.++||++||...+....   
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~---  196 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW---  196 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC---
Confidence            6521     5999999999                    3666766666665    556678999999977553310   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH-----------hCCcEEEEecCe
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE-----------NFSNWASFRPQY  232 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e-----------~~~~~~ilRp~~  232 (250)
                             .+....|+++|...+           .+++++.|.||.
T Consensus       197 -------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~  234 (346)
T 3kvo_A          197 -------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKT  234 (346)
T ss_dssp             -------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSB
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence                   111366888874322           269999999996

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.57  E-value=1.4e-14  Score=125.80  Aligned_cols=145  Identities=19%  Similarity=0.109  Sum_probs=102.7

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|  +||++++++|+++|++|++++|+.+..+.+.+.     .. ....+.++.+|   .+++.++
T Consensus        29 ~~k~vlVT----Gasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~-----~~-~~~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           29 EGKKGVII----GVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPL-----AE-SLGVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-----HH-HHTCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----eCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----HH-hcCCeEEEEcCCCCHHHHHHH
Confidence            46899999    9997  999999999999999999999986432211100     00 11234555565   6777776


Q ss_pred             hcCC-----cccEEEeCCCc------------------------CHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCC
Q 025587          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~  196 (250)
                      ++..     ++|+|||+||.                        |+.++.++++++...-  .++||++||...+.....
T Consensus        99 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~  178 (296)
T 3k31_A           99 FKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH  178 (296)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT
T ss_pred             HHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC
Confidence            6532     58999999983                        4556777777776632  459999999876643221


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                                  ...|+++|...+.            +++++.|+||.|.++...
T Consensus       179 ------------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  221 (296)
T 3k31_A          179 ------------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS  221 (296)
T ss_dssp             ------------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh
Confidence                        2678888843332            699999999999998654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.57  E-value=5.2e-15  Score=125.57  Aligned_cols=140  Identities=16%  Similarity=0.144  Sum_probs=96.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|..+....           .....+.++.+|   .+++.++++
T Consensus         8 ~~k~vlVT----Gas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~~~~D~~~~~~v~~~~~   72 (257)
T 3tl3_A            8 RDAVAVVT----GGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA-----------DLGDRARFAAADVTDEAAVASALD   72 (257)
T ss_dssp             --CEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-----------HTCTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH-----------hcCCceEEEECCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999996533221           112345566665   666666664


Q ss_pred             C----CcccEEEeCCCc------------------------CHHhHHHHHHHHHh------------CCCCEEEEEcCcc
Q 025587          150 G----VTFDVVLDNNGK------------------------NLDAVRPVADWAKS------------SGVKQFLFISSAG  189 (250)
Q Consensus       150 ~----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~------------~~~~~~v~iSS~~  189 (250)
                      .    .++|++||+||.                        |+.++.++++++..            .+.++||++||..
T Consensus        73 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           73 LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             HHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             HHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            2    149999999982                        34555555555543            2356899999987


Q ss_pred             cccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          190 IYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       190 vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      .+....            ....|+++|...+            .+++++.++||.|.++...
T Consensus       153 ~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  202 (257)
T 3tl3_A          153 AFDGQI------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA  202 (257)
T ss_dssp             --CCHH------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-
T ss_pred             hcCCCC------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh
Confidence            654321            1256888885332            3699999999999988654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.57  E-value=9.4e-15  Score=124.18  Aligned_cols=144  Identities=18%  Similarity=0.092  Sum_probs=98.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +. .....+..+.+|   ++++.++++
T Consensus         4 ~~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T 2qq5_A            4 NGQVCVVT----GASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQE----AQ-SLGGQCVPVVCDSSQESEVRSLFE   74 (260)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HHSSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HH-HcCCceEEEECCCCCHHHHHHHHH
Confidence            35899999    9999999999999999999999999986544322110    00 012245566666   666665553


Q ss_pred             C------CcccEEEeCCC--c-------------------------CHHhH----HHHHHHHHhCCCCEEEEEcCccccc
Q 025587          150 G------VTFDVVLDNNG--K-------------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       150 ~------~~~d~Vi~~ag--~-------------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .      .++|+|||+||  .                         |+.++    +.+++.+++.+.++||++||...+.
T Consensus        75 ~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  154 (260)
T 2qq5_A           75 QVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ  154 (260)
T ss_dssp             HHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS
T ss_pred             HHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC
Confidence            2      25899999993  1                         23333    4445555566778999999987654


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ..            + ...|+++|...+            .++++++++||.+.++..
T Consensus       155 ~~------------~-~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  199 (260)
T 2qq5_A          155 YM------------F-NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELL  199 (260)
T ss_dssp             CC------------S-SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC
T ss_pred             CC------------C-CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHH
Confidence            21            1 256887774332            379999999999998864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.57  E-value=4.1e-15  Score=130.33  Aligned_cols=150  Identities=17%  Similarity=0.133  Sum_probs=100.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc-CCCCCCCcccc----h--hcCCceEEeCC---H
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK-MKKPPFNRFNE----I--VSAGGKTVWGD---P  141 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~-~~~~~~~~~~~----~--~~~~v~~v~~D---~  141 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.+.... ........+.+    +  ....+..+.+|   +
T Consensus        44 l~gk~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           44 LQGKVAFIT----GAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             TTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            346899999    999999999999999999999999987422110 00000001110    1  12345566666   6


Q ss_pred             HHHHhhhcCC-----cccEEEeCCCc--------------------CHHhHHHHHHHH----HhCC-CCEEEEEcCcccc
Q 025587          142 AEVGNVVGGV-----TFDVVLDNNGK--------------------NLDAVRPVADWA----KSSG-VKQFLFISSAGIY  191 (250)
Q Consensus       142 ~~l~~~l~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~-~~~~v~iSS~~vy  191 (250)
                      +++.++++..     ++|+|||+||.                    |+.++.++++++    ++.+ .++||++||...+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            7777666531     58999999992                    455555555554    4443 5689999998766


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      .....            ...|+++|...+            .+++++.|+||.|+++.
T Consensus       200 ~~~~~------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          200 RGAPG------------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             SCCTT------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             CCCCC------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence            43221            367888884333            26999999999999874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.56  E-value=3.5e-15  Score=128.60  Aligned_cols=145  Identities=16%  Similarity=0.068  Sum_probs=98.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.    +.......+.++.+|   .+++.++++
T Consensus        27 ~~k~vlIT----GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           27 QGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH----CLELGAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987554322110    000011245566666   566666654


Q ss_pred             C-----CcccEEEeC-CC-------------------cCHHhHHHHHHHHHhC---CCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDN-NG-------------------KNLDAVRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~-ag-------------------~~~~~~~~ll~~~~~~---~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     ..+|+|||+ +|                   +|+.++.++++++...   +.++||++||...+....      
T Consensus        99 ~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------  172 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP------  172 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT------
T ss_pred             HHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC------
Confidence            2     148999999 45                   2455666666555331   247999999987664321      


Q ss_pred             CCCCCCCCChhHHHHHHHH--------------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE--------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e--------------~~~~~~ilRp~~i~G~~  237 (250)
                            ....|+++|...+              .++++++++||.+.++.
T Consensus       173 ------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~  216 (286)
T 1xu9_A          173 ------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  216 (286)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh
Confidence                  1266887774322              26899999999998764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.56  E-value=1.3e-14  Score=124.45  Aligned_cols=150  Identities=15%  Similarity=0.126  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+.......++  ....+.++.+|   .+++.++
T Consensus         5 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            5 SGKTLFIT----GASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHH
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            46899999    999999999999999999999999999866544322100000011  12345566666   6666666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHH----HHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADW----AKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~----~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++.     .++|++||+||                    +|+.++..+.++    +++.+.++||++||...+....   
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC---
Confidence            542     15899999999                    355565555555    4556678999999976543210   


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCe-eecC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQY-MIGS  236 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~-i~G~  236 (250)
                             .+....|+++|...+            .+++++.++||. +-.+
T Consensus       158 -------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~  201 (274)
T 3e03_A          158 -------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD  201 (274)
T ss_dssp             -------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc
Confidence                   001256888874333            269999999994 5444

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.56  E-value=4e-15  Score=126.32  Aligned_cols=157  Identities=14%  Similarity=0.092  Sum_probs=105.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|++ +|++|++++|+.+..+...+.    +. .....+.++.+|   .+++.+++
T Consensus         3 ~~k~vlIT----GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dl~~~~~~~~~~   73 (276)
T 1wma_A            3 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ----LQ-AEGLSPRFHQLDIDDLQSIRALR   73 (276)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH----HH-HTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHH----HH-hcCCeeEEEECCCCCHHHHHHHH
Confidence            45899999    9999999999999999 999999999986443321100    00 012345566666   66777666


Q ss_pred             cCC-----cccEEEeCCCc--------------------CHHhHHHHHHHHHhCC--CCEEEEEcCcccccCC-C-----
Q 025587          149 GGV-----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSG--VKQFLFISSAGIYKPA-D-----  195 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~-~-----  195 (250)
                      +..     ++|+|||+||.                    |+.++.++++++.+..  .++||++||...+... .     
T Consensus        74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~  153 (276)
T 1wma_A           74 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPEL  153 (276)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHH
T ss_pred             HHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhH
Confidence            521     48999999982                    4567888888887742  3599999998766320 0     


Q ss_pred             -----CCCccCCC-------------------CCCCCCChhHHHHHHH---------H-------hCCcEEEEecCeeec
Q 025587          196 -----EPPHVEGD-------------------VVKPDAGHVQVEKYIS---------E-------NFSNWASFRPQYMIG  235 (250)
Q Consensus       196 -----~~~~~e~~-------------------~~~~~~~~y~~~k~~~---------e-------~~~~~~ilRp~~i~G  235 (250)
                           ..++.|.+                   +..+. ..|+.+|...         +       .++++++++||.|.+
T Consensus       154 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t  232 (276)
T 1wma_A          154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  232 (276)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             HhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence                 00111111                   11222 6788887322         1       379999999999998


Q ss_pred             CCCC
Q 025587          236 SGNN  239 (250)
Q Consensus       236 ~~~~  239 (250)
                      +...
T Consensus       233 ~~~~  236 (276)
T 1wma_A          233 DMAG  236 (276)
T ss_dssp             TTTC
T ss_pred             CcCC
Confidence            8654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.56  E-value=7e-15  Score=125.13  Aligned_cols=146  Identities=15%  Similarity=0.093  Sum_probs=99.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .+|+||||    ||+|+||++++++|+++|++|+++.+.. +..+...+.    +. .....+..+.+|   .+++.+++
T Consensus         7 ~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~   77 (259)
T 3edm_A            7 TNRTIVVA----GAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAE----IE-KLGRSALAIKADLTNAAEVEAAI   77 (259)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHH----HH-TTTSCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HH-hcCCceEEEEcCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999985543 322211000    00 012345566666   66777666


Q ss_pred             cCC-----cccEEEeCCC---------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccc-cCCCCCCc
Q 025587          149 GGV-----TFDVVLDNNG---------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIY-KPADEPPH  199 (250)
Q Consensus       149 ~~~-----~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy-~~~~~~~~  199 (250)
                      +..     ++|+|||+||                     +|+.++.++++++...-  .++||++||...+ .....   
T Consensus        78 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---  154 (259)
T 3edm_A           78 SAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPG---  154 (259)
T ss_dssp             HHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTT---
T ss_pred             HHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCC---
Confidence            521     5899999998                     25677888888887643  3489999998776 22211   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|+++|...+.           .++++.++||.+.++...
T Consensus       155 ---------~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~  196 (259)
T 3edm_A          155 ---------ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD  196 (259)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccc
Confidence                     2678888854432           389999999999988643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.56  E-value=1.3e-14  Score=123.50  Aligned_cols=147  Identities=11%  Similarity=0.070  Sum_probs=101.6

Q ss_pred             cCcEEEEEecCCCcchh--hHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+  ||++++++|+++|++|++++|+.+..+.+.+.    ..+.....+.++.+|   .+++.++
T Consensus         6 ~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~   77 (266)
T 3oig_A            6 EGRNIVVM----GVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHEL----AGTLDRNDSIILPCDVTNDAEIETC   77 (266)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----HHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH----HHhcCCCCceEEeCCCCCHHHHHHH
Confidence            46899999    99987  99999999999999999999975332211100    000111246666666   6666666


Q ss_pred             hcCC-----cccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCC
Q 025587          148 VGGV-----TFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~~-----~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++..     .+|+|||+||.                        |+.++.++++++...  ..++||++||...+.....
T Consensus        78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  157 (266)
T 3oig_A           78 FASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN  157 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT
T ss_pred             HHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC
Confidence            6431     58999999982                        345566777777663  2358999999876643221


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                                  ...|+++|...+.            ++++++++||.+.++...
T Consensus       158 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  200 (266)
T 3oig_A          158 ------------YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAK  200 (266)
T ss_dssp             ------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT
T ss_pred             ------------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccc
Confidence                        2678888844332            699999999999987543

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.56  E-value=2e-14  Score=122.54  Aligned_cols=143  Identities=15%  Similarity=0.125  Sum_probs=98.6

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+  |+||++++++|+++|++|++++|+. ..+..       ..++.  .....++.+|   ++++.
T Consensus         8 ~~k~vlVT----Gas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~-------~~~l~~~~~~~~~~~~D~~~~~~v~   75 (265)
T 1qsg_A            8 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGR-------VEEFAAQLGSDIVLQCDVAEDASID   75 (265)
T ss_dssp             TTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHH-------HHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHH-------HHHHHHhcCCcEEEEccCCCHHHHH
Confidence            35789999    999  9999999999999999999999976 21110       01110  0122445555   66776


Q ss_pred             hhhcC-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccC
Q 025587          146 NVVGG-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~  193 (250)
                      ++++.     .++|+|||+||.                         |+.++.++++++.+.  ..++||++||...+..
T Consensus        76 ~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           76 TMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA  155 (265)
T ss_dssp             HHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC
Confidence            66642     158999999983                         233566777777663  1259999999776543


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|+++|...+.            ++++++++||.++++...
T Consensus       156 ~~~------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  201 (265)
T 1qsg_A          156 IPN------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  201 (265)
T ss_dssp             CTT------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred             CCC------------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhh
Confidence            211            2568887743332            699999999999998643

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.55  E-value=2e-14  Score=121.01  Aligned_cols=139  Identities=14%  Similarity=0.114  Sum_probs=84.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHH------Hh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV------GN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l------~~  146 (250)
                      ++|+||||    ||+|+||++++++|++ |++|++++|+.+..+.+.+          ..++..+.+|..+.      .+
T Consensus         4 ~~k~vlIT----Gas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   68 (245)
T 3e9n_A            4 KKKIAVVT----GATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------IEGVEPIESDIVKEVLEEGGVD   68 (245)
T ss_dssp             --CEEEEE----STTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------STTEEEEECCHHHHHHTSSSCG
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------hcCCcceecccchHHHHHHHHH
Confidence            35899999    9999999999999987 9999999998755443221          12466777773322      12


Q ss_pred             hhcC-CcccEEEeCCCc--------------------CHHhH----HHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          147 VVGG-VTFDVVLDNNGK--------------------NLDAV----RPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       147 ~l~~-~~~d~Vi~~ag~--------------------~~~~~----~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .++. .++|+|||+||.                    |+.++    +.+++.+++.+ ++||++||...+.+...     
T Consensus        69 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~-----  142 (245)
T 3e9n_A           69 KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPG-----  142 (245)
T ss_dssp             GGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCC-----
Confidence            2222 258999999992                    34443    44444444544 79999999887654322     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|+++|...+            .++++++++||.+.++...
T Consensus       143 -------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  185 (245)
T 3e9n_A          143 -------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ  185 (245)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh
Confidence                   267888885433            2699999999999998644

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.55  E-value=7.2e-15  Score=126.57  Aligned_cols=141  Identities=17%  Similarity=0.180  Sum_probs=98.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+..+.+|   .+++.++++
T Consensus         4 ~gk~~lVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~   71 (281)
T 3zv4_A            4 TGEVALIT----GGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV--------AHGGNAVGVVGDVRSLQDQKRAAE   71 (281)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HTBTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH--------HcCCcEEEEEcCCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998765443211        122345566666   666666654


Q ss_pred             CC-----cccEEEeCCCc-------------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCC
Q 025587          150 GV-----TFDVVLDNNGK-------------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       150 ~~-----~~d~Vi~~ag~-------------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      ..     ++|++||+||+                         |+.++..+++++    ++.+ +++|++||...+.+..
T Consensus        72 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~  150 (281)
T 3zv4_A           72 RCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNG  150 (281)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSS
T ss_pred             HHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCC
Confidence            31     58999999983                         334444555444    3333 6999999987654322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                      .            ...|+++|...+.           .++++.|+||.+..+..
T Consensus       151 ~------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~  192 (281)
T 3zv4_A          151 G------------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLR  192 (281)
T ss_dssp             S------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--C
T ss_pred             C------------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcc
Confidence            1            2668888844332           38999999999998854

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.55  E-value=9.9e-15  Score=121.29  Aligned_cols=129  Identities=16%  Similarity=0.054  Sum_probs=98.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-C
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-V  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-~  151 (250)
                      ++|++|||    ||+|+||++++++|+++|++|++++|+.+                      .+..|++++.++++. .
T Consensus         5 ~~k~vlVT----Gas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g   58 (223)
T 3uce_A            5 DKTVYVVL----GGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIG   58 (223)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhC
Confidence            45789999    99999999999999999999999998753                      122367777777653 2


Q ss_pred             cccEEEeCCC---------------------cCHHhHHHHHHHHHhCC--CCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          152 TFDVVLDNNG---------------------KNLDAVRPVADWAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       152 ~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      ++|++||+||                     .|+.++.++++++.+.-  .++||++||...+.....            
T Consensus        59 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------  126 (223)
T 3uce_A           59 AFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN------------  126 (223)
T ss_dssp             SEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC------------
Confidence            5899999999                     25667888888877632  348999999886654322            


Q ss_pred             CChhHHHHHHHHh---------C-CcEEEEecCeeecCCCC
Q 025587          209 AGHVQVEKYISEN---------F-SNWASFRPQYMIGSGNN  239 (250)
Q Consensus       209 ~~~y~~~k~~~e~---------~-~~~~ilRp~~i~G~~~~  239 (250)
                      ...|++.|...+.         . ++++.++||.+.++...
T Consensus       127 ~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~  167 (223)
T 3uce_A          127 TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYK  167 (223)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGT
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhh
Confidence            2678888854332         3 89999999999988643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.54  E-value=7.8e-15  Score=125.55  Aligned_cols=145  Identities=19%  Similarity=0.157  Sum_probs=98.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC-ccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE-NSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||+|+||++++++|+++|++|+++++..+ ..+.+.+.    + ......+..+.+|   ++++.+++
T Consensus        26 ~~k~~lVT----Gas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~Dl~~~~~v~~~~   96 (267)
T 3u5t_A           26 TNKVAIVT----GASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGK----I-EAAGGKALTAQADVSDPAAVRRLF   96 (267)
T ss_dssp             -CCEEEEE----SCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHH----H-HHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----H-HhcCCeEEEEEcCCCCHHHHHHHH
Confidence            46899999    99999999999999999999999865442 22221100    0 0112345556666   66777666


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.     .++|++||+||                    +|+.++.++++++...  ..++||++||...+.....     
T Consensus        97 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----  171 (267)
T 3u5t_A           97 ATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS-----  171 (267)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC-----
Confidence            52     15999999999                    3566777777776552  2358999999876654322     


Q ss_pred             CCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+++|...+.            +++++.++||.+.++..
T Consensus       172 -------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  213 (267)
T 3u5t_A          172 -------YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLF  213 (267)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC----
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccc
Confidence                   2678888854332            69999999999998864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.54  E-value=1.2e-14  Score=125.78  Aligned_cols=159  Identities=15%  Similarity=0.126  Sum_probs=101.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---H-HHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---P-AEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~-~~l~~~l  148 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.+..+...+.    +.......+.++.+|   . +.+..++
T Consensus        11 ~~k~vlIT----Gas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           11 KRRCAVVT----GGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEK----LKNSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             -CCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CCcEEEEe----cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----HHhcCCCceEEEEccCCCcHHHHHHHH
Confidence            46899999    9999999999999999999999999987544321110    011112346666666   4 5555555


Q ss_pred             cC-----CcccEEEeCCCc--------------------------------------------------CHHhHHH----
Q 025587          149 GG-----VTFDVVLDNNGK--------------------------------------------------NLDAVRP----  169 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------------------------------------~~~~~~~----  169 (250)
                      +.     .++|+|||+||+                                                  |+.++..    
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  162 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV  162 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHH
Confidence            41     258999999984                                                  2334444    


Q ss_pred             HHHHHHhCCCCEEEEEcCcccccCCCCC-------------------------------CccCCCCCCCCCChhHHHHHH
Q 025587          170 VADWAKSSGVKQFLFISSAGIYKPADEP-------------------------------PHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       170 ll~~~~~~~~~~~v~iSS~~vy~~~~~~-------------------------------~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +++.+++.+.++||++||...+......                               ...+.....+....|+++|..
T Consensus       163 ~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a  242 (311)
T 3o26_A          163 LIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKAC  242 (311)
T ss_dssp             HHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHH
T ss_pred             hhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHH
Confidence            4444455667899999997654321100                               000011111123679988865


Q ss_pred             HHh----------CCcEEEEecCeeecCCCC
Q 025587          219 SEN----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       219 ~e~----------~~~~~ilRp~~i~G~~~~  239 (250)
                      .+.          .++++.++||.|.++...
T Consensus       243 ~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~  273 (311)
T 3o26_A          243 LNAYTRVLANKIPKFQVNCVCPGLVKTEMNY  273 (311)
T ss_dssp             HHHHHHHHHHHCTTSEEEEECCCSBCSGGGT
T ss_pred             HHHHHHHHHhhcCCceEEEecCCceecCCcC
Confidence            543          489999999999887543

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.54  E-value=1e-14  Score=123.13  Aligned_cols=145  Identities=21%  Similarity=0.184  Sum_probs=100.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC-CCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG-DENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~-~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      ++|+||||    ||+|+||++++++|+++|++|+++.+. .+..+...       .++.  ...+..+.+|   .+++.+
T Consensus         6 ~~k~vlIT----Gas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            6 KGKVALVT----GASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-------YEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH-------HHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-------HHHHhcCCceEEEecCcCCHHHHHH
Confidence            46899999    999999999999999999999997544 33322211       0111  2234455555   555555


Q ss_pred             hhcC-----------CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccC
Q 025587          147 VVGG-----------VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (250)
Q Consensus       147 ~l~~-----------~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~  193 (250)
                      +++.           .++|+|||+||                    +|+.++.++++++...  +.++||++||...+..
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~  154 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS  154 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence            5432           23899999999                    2566778888887663  3458999999876654


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~~  240 (250)
                      ...            ...|+++|...+            .+++++.++||.+.++....
T Consensus       155 ~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  201 (255)
T 3icc_A          155 LPD------------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAE  201 (255)
T ss_dssp             CTT------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTT
T ss_pred             CCC------------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhh
Confidence            222            367888884433            26999999999999987543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.54  E-value=2e-14  Score=133.07  Aligned_cols=145  Identities=17%  Similarity=0.198  Sum_probs=103.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .+++||||    ||+|+||.+++++|+++|++ |++++|+.+..+...+    ...++.  ...+.++.+|   .+++.+
T Consensus       225 ~~~~vLIT----GgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dv~d~~~v~~  296 (486)
T 2fr1_A          225 PTGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE----LVAELEALGARTTVAACDVTDRESVRE  296 (486)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHH----HHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46899999    99999999999999999995 9999997642211000    001111  2345566666   777888


Q ss_pred             hhcCC----cccEEEeCCCc--------------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          147 VVGGV----TFDVVLDNNGK--------------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       147 ~l~~~----~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      +++..    .+|+|||+||+                    |+.++.++.+++++.+.++||++||...+.....      
T Consensus       297 ~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g------  370 (486)
T 2fr1_A          297 LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------  370 (486)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT------
T ss_pred             HHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC------
Confidence            77653    57999999992                    5788999999999988999999999754332221      


Q ss_pred             CCCCCCCChhHHHHHHH--------HhCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~--------e~~~~~~ilRp~~i~G~~  237 (250)
                            ...|++.|...        ..++++++|+||.+++++
T Consensus       371 ------~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~g  407 (486)
T 2fr1_A          371 ------LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG  407 (486)
T ss_dssp             ------CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred             ------CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCc
Confidence                  14577766443        347999999999998874

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.54  E-value=4.3e-14  Score=121.52  Aligned_cols=142  Identities=16%  Similarity=0.143  Sum_probs=99.7

Q ss_pred             cCcEEEEEecCCCcchh--hHHHHHHHHHhCCCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+|+  ||++++++|+++|++|++++|+.  +..+.+.+         ....+.++.+|   .+++.
T Consensus        25 ~~k~vlVT----Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~---------~~~~~~~~~~Dl~~~~~v~   91 (280)
T 3nrc_A           25 AGKKILIT----GLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCA---------EFNPAAVLPCDVISDQEIK   91 (280)
T ss_dssp             TTCEEEEC----CCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHG---------GGCCSEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHH---------hcCCceEEEeecCCHHHHH
Confidence            46899999    99965  99999999999999999999987  22221111         11235566666   66666


Q ss_pred             hhhcC-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHh---CCCCEEEEEcCccccc
Q 025587          146 NVVGG-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKS---SGVKQFLFISSAGIYK  192 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~---~~~~~~v~iSS~~vy~  192 (250)
                      ++++.     .++|+|||+||.                         |+.++.++++++..   .+.++||++||...+.
T Consensus        92 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~  171 (280)
T 3nrc_A           92 DLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK  171 (280)
T ss_dssp             HHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc
Confidence            66643     258999999983                         23455566665544   2357999999987664


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ....            ...|+++|...+            .++++++++||.|.++...
T Consensus       172 ~~~~------------~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  218 (280)
T 3nrc_A          172 AMPS------------YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAAS  218 (280)
T ss_dssp             CCTT------------THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGG
T ss_pred             CCCC------------chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhh
Confidence            4222            267888874333            3699999999999998644

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.54  E-value=1.7e-14  Score=125.00  Aligned_cols=146  Identities=17%  Similarity=0.128  Sum_probs=99.1

Q ss_pred             ccCcEEEEEecCCCcchh--hHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAV--IGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~--iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      .++|+||||    ||+|+  ||++++++|+++|++|++++|+++..+.+.+     +.. ....+.++.+|   .+++.+
T Consensus        29 l~gk~~lVT----Gasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           29 LQGKRGLIL----GVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEP-----LAE-ELGAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             TTTCEEEEE----CCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHH-----HHH-HHTCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----cCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----HHH-hcCCceEEECCCCCHHHHHH
Confidence            346899999    99987  9999999999999999999998532111100     000 11235556665   667776


Q ss_pred             hhcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCC
Q 025587          147 VVGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~  195 (250)
                      +++.     .++|++||+||.                        |+.++.++++++...  ..++||++||...+....
T Consensus        99 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~  178 (293)
T 3grk_A           99 VFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP  178 (293)
T ss_dssp             HHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC
Confidence            6652     258999999983                        345667777776652  246999999987665322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      .            ...|+++|...+            .+++++.|+||.|.++...
T Consensus       179 ~------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  222 (293)
T 3grk_A          179 N------------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAAS  222 (293)
T ss_dssp             T------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----
T ss_pred             c------------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhh
Confidence            2            267888884333            2699999999999998643

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.53  E-value=1.8e-14  Score=122.60  Aligned_cols=148  Identities=16%  Similarity=0.147  Sum_probs=99.0

Q ss_pred             cccCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           71 AAEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        71 ~~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ...+|+||||    ||+  |+||++++++|+++|++|++++|+.+..+.+.+     +.. ....+.++.+|   .+++.
T Consensus        11 ~~~~k~vlIT----Ga~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~-~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A           11 FLDGKRILLT----GLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE-----FAA-EFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             TTTTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----HHH-HTTCCCEEECCTTCHHHHH
T ss_pred             ccCCCEEEEe----CCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHH-----HHH-HcCCcEEEECCCCCHHHHH
Confidence            3457899999    999  999999999999999999999998532221100     000 11235566666   67777


Q ss_pred             hhhcC-----CcccEEEeCCCc-------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccC
Q 025587          146 NVVGG-----VTFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKP  193 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~  193 (250)
                      ++++.     .++|+|||+||.                         |+.++.++++++...  ..++||++||...+..
T Consensus        81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~  160 (271)
T 3ek2_A           81 ALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA  160 (271)
T ss_dssp             HHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC
Confidence            66653     258999999983                         234566777777653  2358999999876643


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ...            ...|+++|...+.            ++++++++||.|.++....
T Consensus       161 ~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  207 (271)
T 3ek2_A          161 IPN------------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG  207 (271)
T ss_dssp             CTT------------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred             CCC------------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence            221            2678888844332            6999999999999986543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.53  E-value=6.3e-15  Score=129.31  Aligned_cols=143  Identities=15%  Similarity=0.152  Sum_probs=97.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC----------CccccCCCCCCCcccchh--cCCceEEeC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD----------ENSDKMKKPPFNRFNEIV--SAGGKTVWG  139 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~----------~~~~~~~~~~~~~~~~~~--~~~v~~v~~  139 (250)
                      .++|+||||    ||+|+||++++++|+++|++|++++|+.          +..+...       .++.  ...+..+.+
T Consensus        25 l~gk~vlVT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~   93 (322)
T 3qlj_A           25 VDGRVVIVT----GAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV-------DEITAAGGEAVADGS   93 (322)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHH-------HHHHHTTCEEEEECC
T ss_pred             cCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHH-------HHHHhcCCcEEEEEC
Confidence            346899999    9999999999999999999999999872          1111110       1111  223455566


Q ss_pred             C---HHHHHhhhcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHHHhC-------C---CCE
Q 025587          140 D---PAEVGNVVGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWAKSS-------G---VKQ  181 (250)
Q Consensus       140 D---~~~l~~~l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~-------~---~~~  181 (250)
                      |   .+++.++++..     ++|+|||+||                    +|+.++.++++++...       +   -++
T Consensus        94 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~  173 (322)
T 3qlj_A           94 NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGR  173 (322)
T ss_dssp             CTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcE
Confidence            6   66666666521     5899999999                    2566666666665431       1   159


Q ss_pred             EEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          182 FLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       182 ~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                      ||++||...+.....            ...|+++|...+            .+++++.|+|| +..+..
T Consensus       174 IV~isS~~~~~~~~~------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~  229 (322)
T 3qlj_A          174 IINTSSGAGLQGSVG------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMT  229 (322)
T ss_dssp             EEEECCHHHHHCBTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCS
T ss_pred             EEEEcCHHHccCCCC------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccc
Confidence            999999876644322            267888884333            36999999999 766544

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.53  E-value=2.5e-14  Score=126.00  Aligned_cols=145  Identities=16%  Similarity=0.095  Sum_probs=98.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCC---HH------
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA------  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~------  142 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++ |+.+..+.+.+.    +.......+.++.+|   .+      
T Consensus        45 ~~k~~lVT----Gas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~d~~~~~~~~  116 (328)
T 2qhx_A           45 TVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT----LNARRPNSAITVQADLSNVATAPVSG  116 (328)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHHSTTCEEEEECCCSSSCBCC---
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----HHhhcCCeEEEEEeeCCCchhccccc
Confidence            45799999    9999999999999999999999999 876543322110    000012235555555   55      


Q ss_pred             -----------HHHhhhcCC-----cccEEEeCCCcC----------------------------------HHhHHH---
Q 025587          143 -----------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVRP---  169 (250)
Q Consensus       143 -----------~l~~~l~~~-----~~d~Vi~~ag~~----------------------------------~~~~~~---  169 (250)
                                 ++.++++..     .+|+|||+||..                                  +.++..   
T Consensus       117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  196 (328)
T 2qhx_A          117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  196 (328)
T ss_dssp             ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                       677766521     589999999831                                  223333   


Q ss_pred             -HHHHHHhCC------CCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEec
Q 025587          170 -VADWAKSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRP  230 (250)
Q Consensus       170 -ll~~~~~~~------~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp  230 (250)
                       +++.+++.+      .++||++||...+....            ....|+++|...+            .++++++|+|
T Consensus       197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P  264 (328)
T 2qhx_A          197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  264 (328)
T ss_dssp             HHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHhcCCcCCCCCcEEEEECchhhccCCC------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec
Confidence             444444555      67999999987664321            1256888774333            2699999999


Q ss_pred             CeeecCC
Q 025587          231 QYMIGSG  237 (250)
Q Consensus       231 ~~i~G~~  237 (250)
                      |.|.++.
T Consensus       265 G~v~T~~  271 (328)
T 2qhx_A          265 GLSVLVD  271 (328)
T ss_dssp             SSBSCCC
T ss_pred             CcccCCc
Confidence            9999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.52  E-value=1.9e-14  Score=124.08  Aligned_cols=145  Identities=16%  Similarity=0.091  Sum_probs=96.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC-------HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD-------PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D-------~~~l  144 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+. +..+.+.+.    +.......+.++.+|       .+++
T Consensus        22 ~~k~~lVT----Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~----l~~~~~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           22 EAPAAVVT----GAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADE----LNKERSNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHH----HHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH----HHhhcCCceEEEEeecCCccCCHHHH
Confidence            45899999    9999999999999999999999999987 543322110    000012234444444       5666


Q ss_pred             HhhhcC-----CcccEEEeCCCcC------------------------------HHhHHHHHHHHH----hCC------C
Q 025587          145 GNVVGG-----VTFDVVLDNNGKN------------------------------LDAVRPVADWAK----SSG------V  179 (250)
Q Consensus       145 ~~~l~~-----~~~d~Vi~~ag~~------------------------------~~~~~~ll~~~~----~~~------~  179 (250)
                      .++++.     .++|+|||+||..                              +.++..+++++.    +.+      .
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           94 EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence            666642     1589999999831                              223444444443    333      5


Q ss_pred             CEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          180 KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       180 ~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      ++||++||...+.+..            ....|+++|...+            .++++++|+||.++++.
T Consensus       174 g~iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          174 LSIVNLCDAMVDQPCM------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             EEEEEECCTTTTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             eEEEEEecccccCCCC------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            6999999987664321            1266888884322            27999999999999997

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.52  E-value=1.2e-14  Score=124.80  Aligned_cols=142  Identities=14%  Similarity=0.088  Sum_probs=100.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..+|+||||    ||+|+||++++++|+++|++|++++|+.+..+.+.+        .....+.++.+|   .+++.+++
T Consensus        28 l~~k~vlVT----Gas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~--------~~~~~~~~~~~Dl~~~~~v~~~~   95 (281)
T 3ppi_A           28 FEGASAIVS----GGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD--------ELGNRAEFVSTNVTSEDSVLAAI   95 (281)
T ss_dssp             GTTEEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHCTTEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--------HhCCceEEEEcCCCCHHHHHHHH
Confidence            356899999    999999999999999999999999998755443211        123346666666   66666665


Q ss_pred             cC----CcccEEEeC-CCc-------------------------CHHhHHHHHHHHH----h------CCCCEEEEEcCc
Q 025587          149 GG----VTFDVVLDN-NGK-------------------------NLDAVRPVADWAK----S------SGVKQFLFISSA  188 (250)
Q Consensus       149 ~~----~~~d~Vi~~-ag~-------------------------~~~~~~~ll~~~~----~------~~~~~~v~iSS~  188 (250)
                      +.    ..+|+|||+ ++.                         |+.++.++++++.    +      .+.++||++||.
T Consensus        96 ~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A           96 EAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             HHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            42    258999999 441                         3445555555554    2      245699999998


Q ss_pred             ccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          189 GIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       189 ~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                      ..+.....            ...|+++|...+            .+++++.++||.|.++.
T Consensus       176 ~~~~~~~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  224 (281)
T 3ppi_A          176 AGYEGQIG------------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI  224 (281)
T ss_dssp             GGTSCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             cccCCCCC------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence            87654322            267888885332            26999999999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.52  E-value=6.9e-14  Score=119.34  Aligned_cols=144  Identities=15%  Similarity=0.103  Sum_probs=100.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+.+.......     + ......+..+.+|   ++++.++++
T Consensus         6 ~gKvalVT----Gas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~-----~-~~~~~~~~~~~~Dv~~~~~v~~~v~   75 (258)
T 4gkb_A            6 QDKVVIVT----GGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDA-----L-AQRQPRATYLPVELQDDAQCRDAVA   75 (258)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHH-----H-HHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHH-----H-HhcCCCEEEEEeecCCHHHHHHHHH
Confidence            57899999    999999999999999999999999998754321100     0 0122345566665   666665554


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     .++|++||+||+                   |+.+    ++.++..+++.+ ++||++||...+.....     
T Consensus        76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~-----  149 (258)
T 4gkb_A           76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGN-----  149 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSS-----
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCC-----
Confidence            2     259999999993                   3333    555666666544 79999999876543322     


Q ss_pred             CCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCCC
Q 025587          202 GDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                             ...|+++|.            +...+|+++.|.||.|..+...
T Consensus       150 -------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~  192 (258)
T 4gkb_A          150 -------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYR  192 (258)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHh
Confidence                   267888873            2333799999999999888643

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.51  E-value=1.3e-14  Score=123.61  Aligned_cols=143  Identities=17%  Similarity=0.194  Sum_probs=100.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..+       ++.  ..++..+.+|   +++++++
T Consensus         8 ~gKvalVT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~-------~l~~~g~~~~~~~~Dv~~~~~v~~~   76 (255)
T 4g81_D            8 TGKTALVT----GSARGLGFAYAEGLAAAGARVILNDIRATLLAESVD-------TLTRKGYDAHGVAFDVTDELAIEAA   76 (255)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHH-------HHHHTTCCEEECCCCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHHhcCCcEEEEEeeCCCHHHHHHH
Confidence            57899999    999999999999999999999999998765443211       111  1234444555   6666666


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHh-CCCCEEEEEcCcccccCCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKS-SGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~-~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++.     .++|++|||||+                    |+.+    ++.++..+++ .+-++||++||...+..... 
T Consensus        77 ~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~-  155 (255)
T 4g81_D           77 FSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT-  155 (255)
T ss_dssp             HHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT-
T ss_pred             HHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC-
Confidence            542     259999999992                    3444    5556666644 45679999999875543222 


Q ss_pred             CccCCCCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                                 ...|+++|.            +...+|+++.|.||.|..+..
T Consensus       156 -----------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~  197 (255)
T 4g81_D          156 -----------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN  197 (255)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             -----------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh
Confidence                       367888873            233379999999999988753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.51  E-value=7.9e-15  Score=125.08  Aligned_cols=145  Identities=17%  Similarity=0.085  Sum_probs=96.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|.....+.+.+.    ..++.  ...+.++.+|   .+++.++
T Consensus        10 ~~k~vlVT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A           10 KNKVIVIA----GGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL----KDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHH----HHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHH----HHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            46899999    9999999999999999999999998764321111000    00111  2235555665   7777776


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ++.     .++|++||+||                    +|+.++..+++++...  +.+++|++||...+......   
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~---  158 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFY---  158 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCC---
Confidence            652     15999999999                    3577788888888763  45689999998766543221   


Q ss_pred             CCCCCCCCCChhHHHHHHH---------H---hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------E---NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e---~~~~~~ilRp~~i~G~~  237 (250)
                               ..|+++|...         |   .+++++.++||.+..+.
T Consensus       159 ---------~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~  198 (262)
T 3ksu_A          159 ---------STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF  198 (262)
T ss_dssp             ---------CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence                     3355555222         2   26999999999998764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.51  E-value=1e-14  Score=122.93  Aligned_cols=138  Identities=12%  Similarity=0.055  Sum_probs=92.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEE-E--cCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh--
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM-T--VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV--  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l-~--R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l--  148 (250)
                      +|+||||    ||+|+||++++++|+++|++|+++ +  |+.+..+.+.+.       +  .+..+.  |.+++.+++  
T Consensus         1 ~k~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~-------~--~~~~~~--~~~~v~~~~~~   65 (244)
T 1zmo_A            1 MVIALVT----HARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESE-------N--PGTIAL--AEQKPERLVDA   65 (244)
T ss_dssp             -CEEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------S--TTEEEC--CCCCGGGHHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHH-------h--CCCccc--CHHHHHHHHHH
Confidence            3789999    999999999999999999999999 6  876544322110       1  122221  433333222  


Q ss_pred             --cC-CcccEEEeCCCc-----------------------CHHhHHHH----HHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          149 --GG-VTFDVVLDNNGK-----------------------NLDAVRPV----ADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 --~~-~~~d~Vi~~ag~-----------------------~~~~~~~l----l~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                        +. .++|+|||+||.                       |+.++.++    ++.+++.+.++||++||...+.....  
T Consensus        66 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--  143 (244)
T 1zmo_A           66 TLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY--  143 (244)
T ss_dssp             HGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC--
Confidence              21 258999999983                       23344444    44445667789999999876654221  


Q ss_pred             ccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                                ...|+++|...+            .++++++|+||.+..+..
T Consensus       144 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          144 ----------NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             ----------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             ----------chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence                      256888774332            269999999999988864

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.51  E-value=4.8e-14  Score=119.36  Aligned_cols=141  Identities=20%  Similarity=0.244  Sum_probs=101.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc--cccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||++.||+++++.|+++|++|++.+|+.+.  .+.+.         .....+..+.+|   ++++.++
T Consensus         8 ~GKvalVT----Gas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~---------~~g~~~~~~~~Dv~d~~~v~~~   74 (247)
T 4hp8_A            8 EGRKALVT----GANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA---------KDGGNASALLIDFADPLAAKDS   74 (247)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH---------HTTCCEEEEECCTTSTTTTTTS
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH---------HhCCcEEEEEccCCCHHHHHHH
Confidence            57899999    999999999999999999999999997532  11110         112234455555   7777777


Q ss_pred             hcCCcccEEEeCCC--------------------cCHHh----HHHHHHHHHhCC-CCEEEEEcCcccccCCCCCCccCC
Q 025587          148 VGGVTFDVVLDNNG--------------------KNLDA----VRPVADWAKSSG-VKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       148 l~~~~~d~Vi~~ag--------------------~~~~~----~~~ll~~~~~~~-~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      ++..++|++|||||                    +|+.+    ++.++..+++.+ -++||++||...+.....      
T Consensus        75 ~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~------  148 (247)
T 4hp8_A           75 FTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR------  148 (247)
T ss_dssp             STTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS------
T ss_pred             HHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC------
Confidence            77667999999999                    24444    455555555544 579999999765433221      


Q ss_pred             CCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          203 DVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                            ...|.++|.            +...+|+++.|.||.|-.+..
T Consensus       149 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~  190 (247)
T 4hp8_A          149 ------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT  190 (247)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch
Confidence                  267988883            333479999999999988753

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.51  E-value=2.8e-14  Score=122.70  Aligned_cols=143  Identities=19%  Similarity=0.157  Sum_probs=100.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      -++|++|||    ||++.||++++++|+++|++|++.+|+.+.+++..+       + .......+.+|   ++++++++
T Consensus        27 L~gKvalVT----Gas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~-------~-~g~~~~~~~~Dv~~~~~v~~~~   94 (273)
T 4fgs_A           27 LNAKIAVIT----GATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA-------E-IGGGAVGIQADSANLAELDRLY   94 (273)
T ss_dssp             TTTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------H-HCTTCEEEECCTTCHHHHHHHH
T ss_pred             hCCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------H-cCCCeEEEEecCCCHHHHHHHH
Confidence            457899999    999999999999999999999999998866553211       1 22344555555   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCccC
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +.     .++|++|++||                    +|+.++..+.+++...  .-+++|++||...+.....     
T Consensus        95 ~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~-----  169 (273)
T 4fgs_A           95 EKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA-----  169 (273)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC-----
Confidence            43     25999999999                    3556666666665441  2358999999765543222     


Q ss_pred             CCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|+++|....            .+|+++.|.||.|..+..
T Consensus       170 -------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~  211 (273)
T 4fgs_A          170 -------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGL  211 (273)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhH
Confidence                   267988883322            269999999999988753

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.50  E-value=3.8e-14  Score=122.61  Aligned_cols=145  Identities=16%  Similarity=0.095  Sum_probs=98.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCC---HH------
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PA------  142 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~------  142 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++ |+.+..+.+.+.    +.......+.++.+|   .+      
T Consensus         8 ~~k~~lVT----Gas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (291)
T 1e7w_A            8 TVPVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT----LNARRPNSAITVQADLSNVATAPVSG   79 (291)
T ss_dssp             CCCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHHSTTCEEEEECCCSSSCBCCCC-
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH----HhhhcCCeeEEEEeecCCcccccccc
Confidence            45799999    9999999999999999999999999 876543322110    000012245555555   55      


Q ss_pred             -----------HHHhhhcCC-----cccEEEeCCCcC----------------------------------HHhHHH---
Q 025587          143 -----------EVGNVVGGV-----TFDVVLDNNGKN----------------------------------LDAVRP---  169 (250)
Q Consensus       143 -----------~l~~~l~~~-----~~d~Vi~~ag~~----------------------------------~~~~~~---  169 (250)
                                 ++.++++..     ++|+|||+||..                                  +.++..   
T Consensus        80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  159 (291)
T 1e7w_A           80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  159 (291)
T ss_dssp             ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence                       777766521     589999999831                                  223333   


Q ss_pred             -HHHHHHhCC------CCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEec
Q 025587          170 -VADWAKSSG------VKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRP  230 (250)
Q Consensus       170 -ll~~~~~~~------~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp  230 (250)
                       +++.+++.+      .++||++||...+.+..            ....|+++|...+            .+++++.|+|
T Consensus       160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  227 (291)
T 1e7w_A          160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  227 (291)
T ss_dssp             HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHhcCCCCCCCCcEEEEEechhhcCCCC------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEee
Confidence             344444555      67999999987664322            1267888874332            2699999999


Q ss_pred             CeeecCC
Q 025587          231 QYMIGSG  237 (250)
Q Consensus       231 ~~i~G~~  237 (250)
                      |.+..+.
T Consensus       228 G~v~T~~  234 (291)
T 1e7w_A          228 GLSVLVD  234 (291)
T ss_dssp             SSBCCGG
T ss_pred             CCccCCc
Confidence            9998776

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.49  E-value=5.6e-14  Score=119.56  Aligned_cols=150  Identities=17%  Similarity=0.167  Sum_probs=101.4

Q ss_pred             ccCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           72 AEKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      .++|+||||    ||+  |+||++++++|+++|++|++++|+.+.. +...+    .+.......+.++.+|   .+++.
T Consensus        18 l~~k~vlIT----Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~Dl~~~~~v~   89 (267)
T 3gdg_A           18 LKGKVVVVT----GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVK----ELEKTYGIKAKAYKCQVDSYESCE   89 (267)
T ss_dssp             CTTCEEEET----TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHH----HHHHHHCCCEECCBCCTTCHHHHH
T ss_pred             cCCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHH----HHHHhcCCceeEEecCCCCHHHHH
Confidence            356899999    999  9999999999999999999999886543 11100    0001112344445555   66666


Q ss_pred             hhhcC-----CcccEEEeCCCc--------------------CHHhHHHHHHHH----HhCCCCEEEEEcCcccccCCCC
Q 025587          146 NVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADWA----KSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++++.     .++|+|||+||.                    |+.++.++++++    ++.+.++||++||...+.....
T Consensus        90 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  169 (267)
T 3gdg_A           90 KLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP  169 (267)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC
Confidence            66643     258999999992                    455555555554    5566789999999775543211


Q ss_pred             CCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~  239 (250)
                                +....|+++|...+.           .++++.+.||.+..+..+
T Consensus       170 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~  213 (267)
T 3gdg_A          170 ----------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSD  213 (267)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGG
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhh
Confidence                      112679988854433           278999999999887643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.49  E-value=1.1e-13  Score=118.34  Aligned_cols=139  Identities=16%  Similarity=0.074  Sum_probs=96.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-  150 (250)
                      -++|++|||    ||++.||++++++|+++|++|++.+|+.+...  .+.          ..+..+..|++++.++++. 
T Consensus         9 L~GK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~--~~~----------~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A            9 LRGKRALIT----AGTKGAGAATVSLFLELGAQVLTTARARPEGL--PEE----------LFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             CTTCEEEES----CCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS--CTT----------TEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCEEEEe----ccCcHHHHHHHHHHHHcCCEEEEEECCchhCC--CcE----------EEEEcCCCCHHHHHHHHHHH
Confidence            357899999    99999999999999999999999999763211  110          1122333456666665542 


Q ss_pred             ----CcccEEEeCCCc----------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          151 ----VTFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 ----~~~d~Vi~~ag~----------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                          .++|++||+||.                      |+.    .++.++..+++.+-++||++||...+.+...    
T Consensus        73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~----  148 (261)
T 4h15_A           73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE----  148 (261)
T ss_dssp             HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC----
Confidence                259999999982                      233    3566677777777789999999764432211    


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                             ....|+++|..            ...+|+++.|.||.|-.+.
T Consensus       149 -------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~  190 (261)
T 4h15_A          149 -------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA  190 (261)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc
Confidence                   12568877732            2337999999999997763

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.48  E-value=8.2e-14  Score=129.70  Aligned_cols=141  Identities=16%  Similarity=0.155  Sum_probs=102.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .+++||||    ||+|+||.+++++|+++|+ +|++++|+........+    ...++.  ...+.++.+|   .+++.+
T Consensus       258 ~~~~vLIT----GgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dvtd~~~v~~  329 (511)
T 2z5l_A          258 PSGTVLIT----GGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAE----LAEELRGHGCEVVHAACDVAERDALAA  329 (511)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHH----HHHHHHTTTCEEEEEECCSSCHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHH----HHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence            46899999    9999999999999999999 58888987632211100    001111  2235566665   788888


Q ss_pred             hhcCCcccEEEeCCCc--------------------CHHhHHHHHHHHHhC-CCCEEEEEcCcc-cccCCCCCCccCCCC
Q 025587          147 VVGGVTFDVVLDNNGK--------------------NLDAVRPVADWAKSS-GVKQFLFISSAG-IYKPADEPPHVEGDV  204 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~--------------------~~~~~~~ll~~~~~~-~~~~~v~iSS~~-vy~~~~~~~~~e~~~  204 (250)
                      +++...+|+|||+||+                    |+.++.++.+++.+. +.++||++||.. +++.. .        
T Consensus       330 ~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-g--------  400 (511)
T 2z5l_A          330 LVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-G--------  400 (511)
T ss_dssp             HHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-T--------
T ss_pred             HHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-C--------
Confidence            8875568999999992                    577888899888776 788999999974 44432 1        


Q ss_pred             CCCCCChhHHHHHHHH--------hCCcEEEEecCeee
Q 025587          205 VKPDAGHVQVEKYISE--------NFSNWASFRPQYMI  234 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~e--------~~~~~~ilRp~~i~  234 (250)
                          ...|++.|...+        .++++++|+||.+.
T Consensus       401 ----~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~  434 (511)
T 2z5l_A          401 ----QGAYAAANAALDALAERRRAAGLPATSVAWGLWG  434 (511)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence                266888875443        37999999999884

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.48  E-value=9e-14  Score=118.72  Aligned_cols=139  Identities=13%  Similarity=0.069  Sum_probs=96.2

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      ++|+||||    ||  +|+||++++++|+++|++|++++|+.+.. +.+.+.        ....+.++.+|   ++++.+
T Consensus         6 ~~k~vlVT----Ga~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~   73 (269)
T 2h7i_A            6 DGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--------LPAKAPLLELDVQNEEHLAS   73 (269)
T ss_dssp             TTCEEEEC----CCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--------SSSCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--------cCCCceEEEccCCCHHHHHH
Confidence            45899999    99  99999999999999999999999987442 222111        11234455555   667776


Q ss_pred             hhcCC--------cccEEEeCCCc-------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccc
Q 025587          147 VVGGV--------TFDVVLDNNGK-------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIY  191 (250)
Q Consensus       147 ~l~~~--------~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy  191 (250)
                      +++..        ++|+|||+||.                         |+.++.++++++...  ..++||++||...+
T Consensus        74 ~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~  153 (269)
T 2h7i_A           74 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR  153 (269)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS
T ss_pred             HHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc
Confidence            66521        59999999983                         234566667776542  12589999987643


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecC
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGS  236 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~  236 (250)
                      +..             ....|+++|...+            .+++++.|+||.+..+
T Consensus       154 ~~~-------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          154 AMP-------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             CCT-------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ccC-------------chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence            211             1256887774332            2799999999999776

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.48  E-value=1.4e-13  Score=117.05  Aligned_cols=147  Identities=16%  Similarity=0.061  Sum_probs=97.6

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||+|  .||++++++|+++|++|++.+|+++..+...+.    +.+.....+..+.+|   ++++.++
T Consensus         5 ~gK~alVT----Gaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~----~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (256)
T 4fs3_A            5 ENKTYVIM----GIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKL----LEQLNQPEAHLYQIDVQSDEEVING   76 (256)
T ss_dssp             TTCEEEEE----CCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----HGGGTCSSCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCcEEEEEccCCCHHHHHHH
Confidence            57899999    9876  899999999999999999999987654432111    111223345666666   6666665


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     .++|++||++|+                        |+.+...+...+..  .+-++||++||........ 
T Consensus        77 ~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~-  155 (256)
T 4fs3_A           77 FEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ-  155 (256)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT-
T ss_pred             HHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc-
Confidence            542     258999999982                        12223333333333  2246899999976443221 


Q ss_pred             CCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ....|+++|..            ...+|+++.|.||.+-.+...
T Consensus       156 -----------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~  199 (256)
T 4fs3_A          156 -----------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAK  199 (256)
T ss_dssp             -----------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT
T ss_pred             -----------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhh
Confidence                       13678888842            233799999999999887543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.47  E-value=3.1e-13  Score=125.30  Aligned_cols=146  Identities=14%  Similarity=0.117  Sum_probs=106.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      ++++||||    ||+|+||.+++++|+++|+ +|+++.|+....+...+    ...++.  ...+.++.+|   .+++.+
T Consensus       238 ~~~~vLIT----GgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~----l~~~l~~~g~~v~~~~~Dvtd~~~v~~  309 (496)
T 3mje_A          238 VHGSVLVT----GGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAE----LRAELEQLGVRVTIAACDAADREALAA  309 (496)
T ss_dssp             CCSEEEEE----TCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHH----HHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            45899999    9999999999999999998 78888886422211100    001111  2345566666   777777


Q ss_pred             hhcC----CcccEEEeCCC---------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          147 VVGG----VTFDVVLDNNG---------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       147 ~l~~----~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      +++.    ..+|+|||+||                     .|+.++.++.+++.+.+.++||++||...+.....     
T Consensus       310 ~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g-----  384 (496)
T 3mje_A          310 LLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG-----  384 (496)
T ss_dssp             HHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT-----
T ss_pred             HHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC-----
Confidence            7754    36999999998                     36788999999999988899999999764433222     


Q ss_pred             CCCCCCCCChhHHHHHHH--------HhCCcEEEEecCeeecCCC
Q 025587          202 GDVVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~--------e~~~~~~ilRp~~i~G~~~  238 (250)
                             ...|++.|...        ..+++++.|.||.+.+.+.
T Consensus       385 -------~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          385 -------QPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC
T ss_pred             -------cHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCcc
Confidence                   26788887543        3379999999999977654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.44  E-value=2.8e-13  Score=124.46  Aligned_cols=143  Identities=17%  Similarity=0.159  Sum_probs=100.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .++++|||    ||+|+||++++++|+++|++|++++|+..... +.       ......++.++.+|   .+++.++++
T Consensus       212 ~gk~~LVT----GgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-l~-------~~~~~~~~~~~~~Dvtd~~~v~~~~~  279 (454)
T 3u0b_A          212 DGKVAVVT----GAARGIGATIAEVFARDGATVVAIDVDGAAED-LK-------RVADKVGGTALTLDVTADDAVDKITA  279 (454)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-HH-------HHHHHHTCEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEe----CCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-HH-------HHHHHcCCeEEEEecCCHHHHHHHHH
Confidence            46899999    99999999999999999999999998642111 00       00112234555555   666666654


Q ss_pred             C------CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC----CCCEEEEEcCcccccCCCCCCc
Q 025587          150 G------VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS----GVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~------~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~----~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .      .++|+|||+||                    .|+.++.++.+++...    +..+||++||...+.....   
T Consensus       280 ~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g---  356 (454)
T 3u0b_A          280 HVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG---  356 (454)
T ss_dssp             HHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT---
T ss_pred             HHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC---
Confidence            2      14899999999                    3577888888888764    6679999999876544322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|++.|...+            .+++++.|+||.|.++...
T Consensus       357 ---------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  399 (454)
T 3u0b_A          357 ---------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE  399 (454)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----
T ss_pred             ---------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhh
Confidence                     267988885222            2799999999999988643

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.43  E-value=3e-13  Score=114.70  Aligned_cols=145  Identities=16%  Similarity=0.117  Sum_probs=97.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh---CCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~  145 (250)
                      ++|++|||    ||+|+||++++++|++   +|++|++++|+.+..+.+.+.    +... ....+.++.+|   ++++.
T Consensus         5 ~~k~~lVT----Gas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~----l~~~~~~~~~~~~~~Dv~~~~~v~   76 (259)
T 1oaa_A            5 GCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEE----LGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHH----HHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCcEEEEe----CCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHH----HHhhCCCCeEEEEecCCCCHHHHH
Confidence            46789999    9999999999999999   899999999987544322110    0000 02235566666   66666


Q ss_pred             hhhcC-------Cccc--EEEeCCCc-----------------------CHHhHHHHHHHHHh----C--CCCEEEEEcC
Q 025587          146 NVVGG-------VTFD--VVLDNNGK-----------------------NLDAVRPVADWAKS----S--GVKQFLFISS  187 (250)
Q Consensus       146 ~~l~~-------~~~d--~Vi~~ag~-----------------------~~~~~~~ll~~~~~----~--~~~~~v~iSS  187 (250)
                      ++++.       .++|  +|||+||.                       |+.++.++++++..    .  +.++||++||
T Consensus        77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS  156 (259)
T 1oaa_A           77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence            65532       1367  99999983                       23345566666644    2  3468999999


Q ss_pred             cccccCCCCCCccCCCCCCCCCChhHHHHHHHHh----------CCcEEEEecCeeecCC
Q 025587          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN----------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~----------~~~~~ilRp~~i~G~~  237 (250)
                      ...+.+..            ....|+++|...+.          +++++.++||.+-.+.
T Consensus       157 ~~~~~~~~------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~  204 (259)
T 1oaa_A          157 LCALQPYK------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             GGGTSCCT------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             chhcCCCC------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch
Confidence            88764322            12678888854433          3889999999987653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.43  E-value=3.8e-14  Score=124.82  Aligned_cols=152  Identities=8%  Similarity=0.037  Sum_probs=95.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcCCC--ccccCCCCCCCcccchhcC--CceEEeCCHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVGDE--NSDKMKKPPFNRFNEIVSA--GGKTVWGDPA  142 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~--~v~~v~~D~~  142 (250)
                      +|+|+||    ||+||||++++..|+++|+       +|+++++.+.  .....       ..++...  .......|.+
T Consensus         4 ~mkVlVt----GaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~-------~~dl~~~~~~~~~di~~~~   72 (327)
T 1y7t_A            4 PVRVAVT----GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGV-------VMELEDCAFPLLAGLEATD   72 (327)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHH-------HHHHHTTTCTTEEEEEEES
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccch-------hhhhhcccccccCCeEecc
Confidence            4689999    9999999999999999996       8999988641  11100       0001110  1111122345


Q ss_pred             HHHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC-CC-EEEEEcCcc---cccCCCCC-CccCC
Q 025587          143 EVGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG-VK-QFLFISSAG---IYKPADEP-PHVEG  202 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~-~~-~~v~iSS~~---vy~~~~~~-~~~e~  202 (250)
                      ++.+++++  +|+|||+||              .|+.+++++++++++.+ .+ ++|++|+..   .+-..+.. ++...
T Consensus        73 ~~~~a~~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~  150 (327)
T 1y7t_A           73 DPKVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPR  150 (327)
T ss_dssp             CHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGG
T ss_pred             ChHHHhCC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChh
Confidence            56777776  799999998              37889999999999975 54 788877743   11000000 01110


Q ss_pred             CCCCCCCChhHHHHHH----HHhCCcEEEEecCeeecCCCCC
Q 025587          203 DVVKPDAGHVQVEKYI----SENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~----~e~~~~~~ilRp~~i~G~~~~~  240 (250)
                      .+  ...++...+++.    ...+++.+++||.+|||++.+.
T Consensus       151 ~~--yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~  190 (327)
T 1y7t_A          151 NF--TAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST  190 (327)
T ss_dssp             GE--EECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred             he--eccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe
Confidence            11  012344444422    2347999999999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.42  E-value=1.2e-13  Score=121.16  Aligned_cols=137  Identities=20%  Similarity=0.223  Sum_probs=90.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---------CccccCCCCCCCcccchhc--CCceEEeCCH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVS--AGGKTVWGDP  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~--~~v~~v~~D~  141 (250)
                      .+|+||||    ||+|+||++++++|+++|++|++++|..         +..+...       .++..  ..+..+..|.
T Consensus         8 ~gk~~lVT----Gas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~-------~~l~~~~~~~~~D~~~~   76 (319)
T 1gz6_A            8 DGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV-------EEIRRRGGKAVANYDSV   76 (319)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHH-------HHHHHTTCEEEEECCCG
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHH-------HHHHhhCCeEEEeCCCH
Confidence            45899999    9999999999999999999999987642         1111100       01111  1123455566


Q ss_pred             HHHHhhhcC-----CcccEEEeCCCc--------------------CHHhHHHHHHH----HHhCCCCEEEEEcCcc-cc
Q 025587          142 AEVGNVVGG-----VTFDVVLDNNGK--------------------NLDAVRPVADW----AKSSGVKQFLFISSAG-IY  191 (250)
Q Consensus       142 ~~l~~~l~~-----~~~d~Vi~~ag~--------------------~~~~~~~ll~~----~~~~~~~~~v~iSS~~-vy  191 (250)
                      +++.++++.     .++|+|||+||+                    |+.++.+++++    +++.+.++||++||.. .|
T Consensus        77 ~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~  156 (319)
T 1gz6_A           77 EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  156 (319)
T ss_dssp             GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            655554431     258999999982                    45554444444    4556778999999974 44


Q ss_pred             cCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCee
Q 025587          192 KPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYM  233 (250)
Q Consensus       192 ~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i  233 (250)
                      +..             ....|+.+|...+            .++++++|+||.+
T Consensus       157 ~~~-------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          157 GNF-------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             CCT-------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             CCC-------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence            421             1256888874332            2699999999987

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.38  E-value=1.6e-12  Score=121.34  Aligned_cols=147  Identities=14%  Similarity=0.128  Sum_probs=101.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEE-EcCCCcc-ccCC----CCCCCc-ccchh--cCCceEEeCC--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIM-TVGDENS-DKMK----KPPFNR-FNEIV--SAGGKTVWGD--  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l-~R~~~~~-~~~~----~~~~~~-~~~~~--~~~v~~v~~D--  140 (250)
                      .++++|||    ||+|+||.+++++|+++|++ |+++ .|+.... +...    ...... ..++.  ...+.++.+|  
T Consensus       250 ~~~~vLIT----GgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          250 ADGTVLVT----GAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT  325 (525)
T ss_dssp             TTSEEEES----STTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC
Confidence            46899999    99999999999999999998 5555 6764220 0000    000000 11111  2345666666  


Q ss_pred             -HHHHHhhhcCC----cccEEEeCCC--------------------cCHHhHHHHHHHHHhCC-----CCEEEEEcCccc
Q 025587          141 -PAEVGNVVGGV----TFDVVLDNNG--------------------KNLDAVRPVADWAKSSG-----VKQFLFISSAGI  190 (250)
Q Consensus       141 -~~~l~~~l~~~----~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~-----~~~~v~iSS~~v  190 (250)
                       .+++.++++..    .+|+|||+||                    .|+.++.++.+++....     .++||++||+..
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~  405 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA  405 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence             77788777652    6899999999                    26788999999888755     789999999765


Q ss_pred             ccCCCCCCccCCCCCCCCCChhHHHHHHHHh--------CCcEEEEecCeeec
Q 025587          191 YKPADEPPHVEGDVVKPDAGHVQVEKYISEN--------FSNWASFRPQYMIG  235 (250)
Q Consensus       191 y~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~--------~~~~~ilRp~~i~G  235 (250)
                      +.....            ...|++.|...+.        +++++.|.||.+-+
T Consensus       406 ~~g~~g------------~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~t  446 (525)
T 3qp9_A          406 IWGGAG------------QGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEG  446 (525)
T ss_dssp             TTCCTT------------CHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTT
T ss_pred             cCCCCC------------CHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcccc
Confidence            433222            2679998865543        69999999999933

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.34  E-value=1.4e-12  Score=123.96  Aligned_cols=138  Identities=16%  Similarity=0.144  Sum_probs=87.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---------CccccCCCCCCCcccchhc--CCceEEeCCH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVS--AGGKTVWGDP  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~--~~v~~v~~D~  141 (250)
                      ++|+||||    ||+|+||++++++|+++|++|++++|+.         +..+...       .++..  ..+..+..|.
T Consensus        18 ~gk~~lVT----Gas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~D~~d~   86 (613)
T 3oml_A           18 DGRVAVVT----GAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVV-------DEIRKAGGEAVADYNSV   86 (613)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHH-------HHHHHTTCCEEECCCCG
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHH-------HHHHHhCCeEEEEeCCH
Confidence            46899999    9999999999999999999999998832         2221110       11111  2233445567


Q ss_pred             HHHHhhhcCC-----cccEEEeCCC--------------------cCHHhHHHHHHHH----HhCCCCEEEEEcCccccc
Q 025587          142 AEVGNVVGGV-----TFDVVLDNNG--------------------KNLDAVRPVADWA----KSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       142 ~~l~~~l~~~-----~~d~Vi~~ag--------------------~~~~~~~~ll~~~----~~~~~~~~v~iSS~~vy~  192 (250)
                      +++.++++..     ++|+||||||                    +|+.++.++.+++    ++.+.++||++||...+.
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~  166 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY  166 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            7777776532     5999999999                    2455555555544    667778999999976543


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCee
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYM  233 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i  233 (250)
                      ....            ...|+++|...+            .+++++.|.||.+
T Consensus       167 ~~~~------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          167 GNFG------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             CCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             CCCC------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence            3221            266888884332            2699999999964

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.33  E-value=1.1e-11  Score=107.09  Aligned_cols=152  Identities=11%  Similarity=0.032  Sum_probs=92.3

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcC-----------CCccccCCCCCCC---cccchhcCC---
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVG-----------DENSDKMKKPPFN---RFNEIVSAG---  133 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~-----------~~~~~~~~~~~~~---~~~~~~~~~---  133 (250)
                      ++|++|||    ||+  |+||++++++|+++|++|++++|+           .+..+.+.+....   ........+   
T Consensus         7 ~~k~~lVT----Gas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            7 RGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CCCEEEEE----CCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            35789999    999  999999999999999999999864           2222221100000   000000000   


Q ss_pred             -----ceEEeC--------CHHHHHhhhcC-----CcccEEEeCCCc----------------------CHHhHHHHHHH
Q 025587          134 -----GKTVWG--------DPAEVGNVVGG-----VTFDVVLDNNGK----------------------NLDAVRPVADW  173 (250)
Q Consensus       134 -----v~~v~~--------D~~~l~~~l~~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~~  173 (250)
                           +..+..        |++++.++++.     .++|+|||+||.                      |+.++.+++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 110000        12234433321     148999999972                      45677778888


Q ss_pred             HHhC--CCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH------------H-HhCCcEEEEecCeeecCCC
Q 025587          174 AKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------S-ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       174 ~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~------------~-e~~~~~~ilRp~~i~G~~~  238 (250)
                      +...  ..++||++||...+......           ...|+++|..            . +.+++++.|+||.+.++..
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~~~-----------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~  231 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIPGY-----------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA  231 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTTC-----------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred             HHHHhccCceEEEEeccccccCCCCc-----------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchh
Confidence            7653  12689999997755432110           1358877732            2 2589999999999999975


Q ss_pred             C
Q 025587          239 N  239 (250)
Q Consensus       239 ~  239 (250)
                      .
T Consensus       232 ~  232 (297)
T 1d7o_A          232 K  232 (297)
T ss_dssp             S
T ss_pred             h
Confidence            4

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.20  E-value=4.5e-11  Score=104.29  Aligned_cols=146  Identities=12%  Similarity=0.033  Sum_probs=89.0

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcCC-----------CccccCCCCCCCcccchhcCCceEEeC
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVGD-----------ENSDKMKKPPFNRFNEIVSAGGKTVWG  139 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~~-----------~~~~~~~~~~~~~~~~~~~~~v~~v~~  139 (250)
                      ++|++|||    ||  +|+||++++++|+++|++|++++|++           +..+...+.....    ....+..+..
T Consensus         8 ~gk~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (315)
T 2o2s_A            8 RGQTAFVA----GVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGS----LIEFAGVYPL   79 (315)
T ss_dssp             TTCEEEEE----CCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSC----BCCCSCEEEC
T ss_pred             CCCEEEEe----CCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccc----cccccccccc
Confidence            46899999    98  89999999999999999999998642           1111110000000    0000111111


Q ss_pred             -----------------------CHHHHHhhhcC-----CcccEEEeCCCc----------------------CHHhHHH
Q 025587          140 -----------------------DPAEVGNVVGG-----VTFDVVLDNNGK----------------------NLDAVRP  169 (250)
Q Consensus       140 -----------------------D~~~l~~~l~~-----~~~d~Vi~~ag~----------------------~~~~~~~  169 (250)
                                             |.+++.++++.     .++|++||+||.                      |+.++..
T Consensus        80 d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  159 (315)
T 2o2s_A           80 DAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVS  159 (315)
T ss_dssp             CTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             cccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence                                   12234444331     148999999972                      3556677


Q ss_pred             HHHHHHhC--CCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHH------------HH-HhCCcEEEEecCeee
Q 025587          170 VADWAKSS--GVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY------------IS-ENFSNWASFRPQYMI  234 (250)
Q Consensus       170 ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~------------~~-e~~~~~~ilRp~~i~  234 (250)
                      +++++...  .-++||++||...+......           ...|+++|.            +. ..+++++.|+||.|.
T Consensus       160 l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-----------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          160 LLQHFGPIMNEGGSAVTLSYLAAERVVPGY-----------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             HHHHHSTTEEEEEEEEEEEEGGGTSCCTTC-----------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             HHHHHHHHHhcCCEEEEEecccccccCCCc-----------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            77777552  12689999998755432111           035887772            22 257999999999998


Q ss_pred             cCC
Q 025587          235 GSG  237 (250)
Q Consensus       235 G~~  237 (250)
                      .+.
T Consensus       229 T~~  231 (315)
T 2o2s_A          229 SRA  231 (315)
T ss_dssp             CHH
T ss_pred             chh
Confidence            763

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.17  E-value=3.4e-11  Score=105.83  Aligned_cols=146  Identities=9%  Similarity=0.005  Sum_probs=90.2

Q ss_pred             CcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCC---------CccccCCCCCCCcccchhcCCceEEeCC--
Q 025587           74 KKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAGGKTVWGD--  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~~~v~~v~~D--  140 (250)
                      +|++|||    ||++  +||++++++|+++|++|++.+|++         +..+........  .......+.++.+|  
T Consensus         2 ~k~~lIT----Gas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIID--KDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCS--SSCBCCEEEEEECCTT
T ss_pred             CcEEEEE----CCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHh--hccccccccccccccc
Confidence            5789999    9864  999999999999999999776543         111111000000  00001113344444  


Q ss_pred             -H--H------------------HHHhhhcC-----CcccEEEeCCCc----------------------CHHhHHHHHH
Q 025587          141 -P--A------------------EVGNVVGG-----VTFDVVLDNNGK----------------------NLDAVRPVAD  172 (250)
Q Consensus       141 -~--~------------------~l~~~l~~-----~~~d~Vi~~ag~----------------------~~~~~~~ll~  172 (250)
                       .  +                  ++.++++.     ..+|++||+||+                      |+.++..+.+
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence             1  3                  55555432     259999999982                      4556666666


Q ss_pred             HHHhCC--CCEEEEEcCcccccCCCCCCccCCCCCCCCCC-hhHHHHH------------HHH-hCCcEEEEecCeeecC
Q 025587          173 WAKSSG--VKQFLFISSAGIYKPADEPPHVEGDVVKPDAG-HVQVEKY------------ISE-NFSNWASFRPQYMIGS  236 (250)
Q Consensus       173 ~~~~~~--~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~-~y~~~k~------------~~e-~~~~~~ilRp~~i~G~  236 (250)
                      ++...-  -++||++||...+.....            .. .|+++|.            +.. .+++++.|.||.|..+
T Consensus       156 ~~~p~m~~~g~Iv~isS~~~~~~~~~------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          156 YFVNIMKPQSSIISLTYHASQKVVPG------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HHHHHHhhCCeEEEEeCccccCCCCc------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            665421  168999999775433221            12 5887772            333 5899999999999876


Q ss_pred             C
Q 025587          237 G  237 (250)
Q Consensus       237 ~  237 (250)
                      .
T Consensus       224 ~  224 (329)
T 3lt0_A          224 A  224 (329)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.17  E-value=4e-11  Score=104.74  Aligned_cols=35  Identities=23%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             cCcEEEEEecCCCc--chhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           73 EKKKVLIVNTNSGG--HAVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg--tG~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      .+|++|||    ||  +++||++++++|+++|++|++++|+
T Consensus         8 ~~k~~lVT----Ga~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            8 RGKTAFVA----GVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             TTCEEEEE----CCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEe----CCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            35789999    98  8999999999999999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.15  E-value=1e-10  Score=86.45  Aligned_cols=93  Identities=25%  Similarity=0.256  Sum_probs=73.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++++|+|+    |+ |++|+.+++.|++.| ++|++++|+++..+.+.           ..++..+..|   .+++.+++
T Consensus         4 ~~~~v~I~----G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~   67 (118)
T 3ic5_A            4 MRWNICVV----GA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----------RMGVATKQVDAKDEAGLAKAL   67 (118)
T ss_dssp             TCEEEEEE----CC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----------TTTCEEEECCTTCHHHHHHHT
T ss_pred             CcCeEEEE----CC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----------hCCCcEEEecCCCHHHHHHHH
Confidence            46799999    99 999999999999999 99999999876554322           2345555555   67888888


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      ++  +|+||++++..  ...++++++.+.|+++|.+.
T Consensus        68 ~~--~d~vi~~~~~~--~~~~~~~~~~~~g~~~~~~~  100 (118)
T 3ic5_A           68 GG--FDAVISAAPFF--LTPIIAKAAKAAGAHYFDLT  100 (118)
T ss_dssp             TT--CSEEEECSCGG--GHHHHHHHHHHTTCEEECCC
T ss_pred             cC--CCEEEECCCch--hhHHHHHHHHHhCCCEEEec
Confidence            76  79999999744  46889999999998666543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.11  E-value=5.6e-11  Score=112.72  Aligned_cols=136  Identities=18%  Similarity=0.246  Sum_probs=88.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---------CccccCCCCCCCcccchhcCC--ceEEeCCH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---------ENSDKMKKPPFNRFNEIVSAG--GKTVWGDP  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---------~~~~~~~~~~~~~~~~~~~~~--v~~v~~D~  141 (250)
                      ++|++|||    ||+++||++++++|+++|++|++.+|+.         +..+...       .++...+  ...+..|.
T Consensus         7 ~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~-------~~i~~~g~~~~~d~~d~   75 (604)
T 2et6_A            7 KDKVVIIT----GAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVV-------DEIVKNGGVAVADYNNV   75 (604)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHH-------HHHHHTTCEEEEECCCT
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHH-------HHHHhcCCeEEEEcCCH
Confidence            46889999    9999999999999999999999998764         2221110       1111111  23445554


Q ss_pred             HHHHhhhc----C-CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          142 AEVGNVVG----G-VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       142 ~~l~~~l~----~-~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      ++++++++    . .++|++|||||+                    |+.+    ++.++..+++.+-++||++||...+.
T Consensus        76 ~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           76 LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             TCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            33333322    1 248999999992                    3333    55666667666667999999975433


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQ  231 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~  231 (250)
                      ....            ...|+++|..            ...+++++.|.|+
T Consensus       156 ~~~~------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          156 GNFG------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             CCTT------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CCCC------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence            2211            2668888832            2337999999997

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.11  E-value=1.4e-10  Score=110.00  Aligned_cols=135  Identities=20%  Similarity=0.160  Sum_probs=90.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCCH-HHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGDP-AEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D~-~~l~~~l~  149 (250)
                      ++|++|||    ||+++||++++++|+++|++|++.+|..  .+..       ..++.  ...+..+.+|. ++.+++++
T Consensus       321 ~gkvalVT----Gas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~-------~~~i~~~g~~~~~~~~Dv~~~~~~~~~  387 (604)
T 2et6_A          321 KDKVVLIT----GAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKT-------VDEIKAAGGEAWPDQHDVAKDSEAIIK  387 (604)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHH-------HHHHHHTTCEEEEECCCHHHHHHHHHH
T ss_pred             CCCeEEEE----CcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHH-------HHHHHhcCCeEEEEEcChHHHHHHHHH
Confidence            46899999    9999999999999999999999988632  1110       01111  12244566776 44444432


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++|||||+                    |+.+    ++.++..+++.+-++||++||...+....     
T Consensus       388 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-----  462 (604)
T 2et6_A          388 NVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-----  462 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----
Confidence            1     258999999992                    3333    55666666666668999999975432221     


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCe
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQY  232 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~  232 (250)
                             ....|+++|..            ...+++++.|.||.
T Consensus       463 -------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          463 -------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence                   12668888832            23379999999983

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.08  E-value=3.5e-10  Score=110.37  Aligned_cols=143  Identities=15%  Similarity=0.187  Sum_probs=101.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH-hCCC-eEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      +++++|||    ||+|.||+.++++|+ ++|+ +|++++|+....+...+    ...++.  ...+.++.+|   .+++.
T Consensus       529 ~~~~~lIt----Gg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~G~~v~~~~~Dvsd~~~v~  600 (795)
T 3slk_A          529 AAGTVLVT----GGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAE----LVAQLTAYGAEVSLQACDVADRETLA  600 (795)
T ss_dssp             TTSEEEEE----TTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHH
T ss_pred             cccceeec----cCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHH----HHHHHHhcCCcEEEEEeecCCHHHHH
Confidence            46899999    999999999999999 7898 58889998432221100    011122  2345566666   77777


Q ss_pred             hhhcC----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          146 NVVGG----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       146 ~~l~~----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      ++++.    .++|+|||+||                    .|+.++.++.+++.. .. +||++||...+.....     
T Consensus       601 ~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g-----  673 (795)
T 3slk_A          601 KVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGG-----  673 (795)
T ss_dssp             HHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSS-----
T ss_pred             HHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCC-----
Confidence            77754    26999999999                    367788888888743 34 8999999865443322     


Q ss_pred             CCCCCCCCChhHHHHHHHH--------hCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e--------~~~~~~ilRp~~i~G~~  237 (250)
                             ...|++.|.+.+        .|++++.|.||.+-+++
T Consensus       674 -------~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          674 -------QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred             -------CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence                   267888874433        37999999999887654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.88  E-value=5.7e-09  Score=108.21  Aligned_cols=141  Identities=17%  Similarity=0.093  Sum_probs=91.5

Q ss_pred             cCcEEEEEecCCCcchh-hHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcc-cchh--cCCceEEeCC---HHHH
Q 025587           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRF-NEIV--SAGGKTVWGD---PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~-~~~~--~~~v~~v~~D---~~~l  144 (250)
                      ++|+||||    ||+++ ||++++++|+++|++|++++ |+.+..+...+.    + .++.  ...+.++.+|   .+++
T Consensus       674 ~gKvaLVT----GASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~e----L~~~~~~~g~~v~~v~~DVsd~~sV  745 (1887)
T 2uv8_A          674 KDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQS----IYAKYGAKGSTLIVVPFNQGSKQDV  745 (1887)
T ss_dssp             TTCEEEEE----SCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH----HHHHHCCTTCEEEEEECCTTCHHHH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHH----HHHHhhcCCCeEEEEEecCCCHHHH
Confidence            46899999    99998 99999999999999999985 555433211100    0 0000  2234556666   6666


Q ss_pred             Hhhhc----C-----C--cccEEEeCCCc-----------------------CHHhHHHHHHHHHhC------CCCEEEE
Q 025587          145 GNVVG----G-----V--TFDVVLDNNGK-----------------------NLDAVRPVADWAKSS------GVKQFLF  184 (250)
Q Consensus       145 ~~~l~----~-----~--~~d~Vi~~ag~-----------------------~~~~~~~ll~~~~~~------~~~~~v~  184 (250)
                      .++++    .     .  .+|+||||||+                       |+.++..++.+++..      +.++||+
T Consensus       746 ~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVn  825 (1887)
T 2uv8_A          746 EALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  825 (1887)
T ss_dssp             HHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEE
T ss_pred             HHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEE
Confidence            66553    2     1  59999999983                       233445566665322      2268999


Q ss_pred             EcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeec
Q 025587          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIG  235 (250)
Q Consensus       185 iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G  235 (250)
                      +||...+..              ....|+++|...+.            .++++.|+||.+.|
T Consensus       826 ISS~ag~~g--------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t  874 (1887)
T 2uv8_A          826 MSPNHGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  874 (1887)
T ss_dssp             ECSCTTCSS--------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred             EcChHhccC--------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence            999754322              12568888843332            18899999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.87  E-value=1.4e-08  Score=77.36  Aligned_cols=97  Identities=20%  Similarity=0.274  Sum_probs=71.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~  149 (250)
                      +++|+|+    |+ |.+|+.+++.|.+.|++|++++|+++..+.+.+           .+...+.+|   .+.+.++ +.
T Consensus         6 ~~~v~I~----G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-----------~~~~~~~~d~~~~~~l~~~~~~   69 (144)
T 2hmt_A            6 NKQFAVI----GL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIR   69 (144)
T ss_dssp             CCSEEEE----CC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-----------TCSEEEECCTTCHHHHHTTTGG
T ss_pred             CCcEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------hCCEEEEeCCCCHHHHHhcCCC
Confidence            4689999    87 999999999999999999999998755443322           133445555   4555554 33


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                        ++|+||++.+.+......++..+++.+.+++|...+.
T Consensus        70 --~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           70 --NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             --GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             --CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence              3799999999765666677888888888877766653

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.86  E-value=6.6e-09  Score=93.93  Aligned_cols=86  Identities=17%  Similarity=0.165  Sum_probs=56.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCC-CCC---Ccc-cchh--cCCceEEeCC---H
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKK-PPF---NRF-NEIV--SAGGKTVWGD---P  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~-~~~---~~~-~~~~--~~~v~~v~~D---~  141 (250)
                      .+|++|||    ||+++||+++++.|++ +|++|++++|+.+..+.... ..+   ..+ ..+.  ...+..+.+|   +
T Consensus        60 ~gKvaLVT----GASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVI----GASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCH
Confidence            47899999    9999999999999999 99999999998755432100 000   000 0111  2234556666   5


Q ss_pred             HHHHhhhc----C--CcccEEEeCCCc
Q 025587          142 AEVGNVVG----G--VTFDVVLDNNGK  162 (250)
Q Consensus       142 ~~l~~~l~----~--~~~d~Vi~~ag~  162 (250)
                      +++.++++    .  .++|++||+||.
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            55555442    1  259999999975

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.85  E-value=8e-09  Score=92.72  Aligned_cols=87  Identities=14%  Similarity=0.110  Sum_probs=57.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCC-CCCC---Cccc-ch--hcCCceEEeCC---
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMK-KPPF---NRFN-EI--VSAGGKTVWGD---  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~-~~~~---~~~~-~~--~~~~v~~v~~D---  140 (250)
                      ..+|++|||    ||++.||+++++.|++ +|++|++++|+.+...... ...+   ..+. .+  ....+..+.+|   
T Consensus        45 ~~gKvaLVT----Gas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           45 NGPKRVLVI----GASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             TCCSEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCCCEEEEe----CcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            347899999    9999999999999999 9999999998765432110 0000   0000 11  12234456666   


Q ss_pred             HHHHHhhhcC-----CcccEEEeCCCc
Q 025587          141 PAEVGNVVGG-----VTFDVVLDNNGK  162 (250)
Q Consensus       141 ~~~l~~~l~~-----~~~d~Vi~~ag~  162 (250)
                      ++++.++++.     .++|++||+||.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            6666555532     259999999875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.83  E-value=1e-08  Score=92.96  Aligned_cols=87  Identities=18%  Similarity=0.182  Sum_probs=57.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHH--HHHHHHhCCCeEEEEEcCCCccccCC-------CCCCCcccchhcCCceEEeCC--
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFY--LAKELLGSGHEVTIMTVGDENSDKMK-------KPPFNRFNEIVSAGGKTVWGD--  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~G~~V~~l~R~~~~~~~~~-------~~~~~~~~~~~~~~v~~v~~D--  140 (250)
                      ..+|+||||    ||++.||++  +++.|.++|++|++++|+.+......       ..............+..+.+|  
T Consensus        58 ~~gK~aLVT----GassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           58 RGPKKVLIV----GASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCSEEEEE----SCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            457899999    999999999  99999999999999999764432100       000000001112335566666  


Q ss_pred             -HHHHHhhhcC-----CcccEEEeCCCc
Q 025587          141 -PAEVGNVVGG-----VTFDVVLDNNGK  162 (250)
Q Consensus       141 -~~~l~~~l~~-----~~~d~Vi~~ag~  162 (250)
                       .+++.++++.     .++|++||+||.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence             5555555431     259999999885

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.79  E-value=3.2e-09  Score=107.47  Aligned_cols=144  Identities=17%  Similarity=0.111  Sum_probs=91.0

Q ss_pred             cCcEEEEEecCCCcchh-hHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|+ ||++++++|+++|++|++++ |+.+..+...+.-...+. .....+.++.+|   .+++.++
T Consensus       475 ~GKvALVT----GASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~-a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          475 KDKYVLIT----GAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG-AKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             CSCCEEEC----SCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTC-CTTCEEEEEECCSSSTTHHHHH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhh-cCCCeEEEEEeCCCCHHHHHHH
Confidence            35789999    99998 99999999999999999984 555443321110000000 012234555565   5666655


Q ss_pred             hc----C-----C--cccEEEeCCCc-----------------------CHHhHHHHHHHHHh------CCCCEEEEEcC
Q 025587          148 VG----G-----V--TFDVVLDNNGK-----------------------NLDAVRPVADWAKS------SGVKQFLFISS  187 (250)
Q Consensus       148 l~----~-----~--~~d~Vi~~ag~-----------------------~~~~~~~ll~~~~~------~~~~~~v~iSS  187 (250)
                      ++    .     .  ++|+|||+||+                       |+.++..++++++.      .+.++||++||
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence            53    2     1  48999999983                       23345555565522      22358999999


Q ss_pred             cccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeec
Q 025587          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIG  235 (250)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G  235 (250)
                      ...+..              ....|+++|...+.            .++++.|.||.+.|
T Consensus       630 iAG~~G--------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          630 NHGTFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             CTTTSS--------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             hHhccC--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            653322              12568888854332            27889999999985

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.73  E-value=2.3e-08  Score=103.60  Aligned_cols=144  Identities=17%  Similarity=0.077  Sum_probs=90.0

Q ss_pred             cCcEEEEEecCCCcchh-hHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      ++|+||||    ||+|+ ||++++++|+++|++|++++ |+.+......+.-   ..++.  ...+.++.+|   .+++.
T Consensus       651 ~gKvaLVT----GASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL---~~el~~~G~~v~~v~~DVsd~esV~  723 (1878)
T 2uv9_A          651 QGKHALMT----GAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGI---YARCGARGSQLVVVPFNQGSKQDVE  723 (1878)
T ss_dssp             TTCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHH---HHHHCCTTCEEEEEECCTTCHHHHH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHH---HHHhhccCCeEEEEEcCCCCHHHHH
Confidence            45899999    99999 99999999999999999986 4443322110000   00011  2235556666   66666


Q ss_pred             hhhc----C---C--cccEEEeCCCc-----------------------CHHhHHHHHHHHH--h----CCCCEEEEEcC
Q 025587          146 NVVG----G---V--TFDVVLDNNGK-----------------------NLDAVRPVADWAK--S----SGVKQFLFISS  187 (250)
Q Consensus       146 ~~l~----~---~--~~d~Vi~~ag~-----------------------~~~~~~~ll~~~~--~----~~~~~~v~iSS  187 (250)
                      ++++    .   .  .+|+||||||+                       |+.++.+++.+++  .    .+.++||++||
T Consensus       724 alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS  803 (1878)
T 2uv9_A          724 ALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP  803 (1878)
T ss_dssp             HHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred             HHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence            6653    2   2  58999999983                       1233444444421  1    23368999999


Q ss_pred             cccccCCCCCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeee-cCC
Q 025587          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMI-GSG  237 (250)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~-G~~  237 (250)
                      ...+..  .            ...|+++|...+.            +++++.|.||.+- ++.
T Consensus       804 ~ag~~g--g------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m  852 (1878)
T 2uv9_A          804 NHGTFG--N------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL  852 (1878)
T ss_dssp             CSSSSS--C------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred             hhhccC--C------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence            754322  0            1458888743222            2889999999987 543

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.67  E-value=4.8e-08  Score=85.77  Aligned_cols=101  Identities=16%  Similarity=0.142  Sum_probs=73.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccc--cCCCCCCCcccchhcCCceEEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l  148 (250)
                      ++++|+|+    ||+|++|..++..|+.+|  ++|++++++++...  .+.+.       .....+.. ..+.+++.+++
T Consensus         7 ~~mKI~Vi----GAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~-------~~~~~v~~-~~~t~d~~~al   74 (326)
T 1smk_A            7 PGFKVAIL----GAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHM-------DTGAVVRG-FLGQQQLEAAL   74 (326)
T ss_dssp             -CEEEEEE----TTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTS-------CSSCEEEE-EESHHHHHHHH
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcc-------cccceEEE-EeCCCCHHHHc
Confidence            45799999    999999999999999999  89999997764110  01110       00001222 22456778888


Q ss_pred             cCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ++  .|+||+++|              .|+..++++++.+.+.+.+.+|+++|
T Consensus        75 ~g--aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           75 TG--MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             TT--CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CC--CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            88  699999998              35688999999999988887888877

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.63  E-value=2.2e-07  Score=71.00  Aligned_cols=95  Identities=15%  Similarity=0.142  Sum_probs=69.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++|+|+    |+ |.+|+.+++.|.++|++|++++++++..+.           +...++.++.+|   ++.+.++ .-
T Consensus         6 ~~~v~I~----G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-----------~~~~~~~~~~gd~~~~~~l~~~-~~   68 (141)
T 3llv_A            6 RYEYIVI----GS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-----------LEDEGFDAVIADPTDESFYRSL-DL   68 (141)
T ss_dssp             CCSEEEE----CC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-----------HHHTTCEEEECCTTCHHHHHHS-CC
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-----------HHHCCCcEEECCCCCHHHHHhC-Cc
Confidence            5689999    76 999999999999999999999998755442           223456677777   5555554 22


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      .++|+||.+.+ +......+...+++.+..++|-..
T Consensus        69 ~~~d~vi~~~~-~~~~n~~~~~~a~~~~~~~iia~~  103 (141)
T 3llv_A           69 EGVSAVLITGS-DDEFNLKILKALRSVSDVYAIVRV  103 (141)
T ss_dssp             TTCSEEEECCS-CHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred             ccCCEEEEecC-CHHHHHHHHHHHHHhCCceEEEEE
Confidence            34899999988 556666677778886755555433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.59  E-value=9.7e-08  Score=102.84  Aligned_cols=145  Identities=11%  Similarity=0.055  Sum_probs=96.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~  146 (250)
                      .+|++|||    ||+|.||++++++|+++|++ |++++|+.+..+...+    ...++.  ...+.++.+|   .+++.+
T Consensus      1883 ~~k~~lIT----Ggs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~g~~v~~~~~Dvsd~~~v~~ 1954 (2512)
T 2vz8_A         1883 PHKSYVIT----GGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR----QVREWRRQGVQVLVSTSNASSLDGARS 1954 (2512)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHH----HHHHHHHTTCEEEEECCCSSSHHHHHH
T ss_pred             CCCEEEEE----CCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHH----HHHHHHhCCCEEEEEecCCCCHHHHHH
Confidence            46899999    99999999999999999987 7777887644321100    001111  2234455555   666666


Q ss_pred             hhcC----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCCCCCcc
Q 025587          147 VVGG----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSS--GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       147 ~l~~----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      +++.    ..+|+|||+||                    .|+.++.++.+++...  ..++||++||.........    
T Consensus      1955 ~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g---- 2030 (2512)
T 2vz8_A         1955 LITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG---- 2030 (2512)
T ss_dssp             HHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT----
T ss_pred             HHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC----
Confidence            5532    25999999999                    3688888887776552  3479999999764432221    


Q ss_pred             CCCCCCCCCChhHHHHHHHH--------hCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYISE--------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~e--------~~~~~~ilRp~~i~G~~  237 (250)
                              ...|++.|...+        .|++...+-.|.+-+.+
T Consensus      2031 --------~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~~G 2067 (2512)
T 2vz8_A         2031 --------QANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDVG 2067 (2512)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCTTS
T ss_pred             --------cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCCcc
Confidence                    267998885443        36777777777654443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.50  E-value=8e-07  Score=67.15  Aligned_cols=95  Identities=20%  Similarity=0.316  Sum_probs=65.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~  149 (250)
                      .|+|+|+    |+ |.+|..+++.|.+.|++|++++|+++..+.+.          ...++..+.+|   .+.+.+. +.
T Consensus         4 ~m~i~Ii----G~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~----------~~~~~~~~~~d~~~~~~l~~~~~~   68 (140)
T 1lss_A            4 GMYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS----------AEIDALVINGDCTKIKTLEDAGIE   68 (140)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----------HHCSSEEEESCTTSHHHHHHTTTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----------HhcCcEEEEcCCCCHHHHHHcCcc
Confidence            4789999    86 99999999999999999999999765443211          11245566666   4444433 33


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                        +.|+||.+.+.+ .....+.+.+++.+.+++|...
T Consensus        69 --~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           69 --DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             --TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEEC
T ss_pred             --cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEe
Confidence              379999998753 3334566777777877777543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.47  E-value=4.5e-06  Score=64.85  Aligned_cols=97  Identities=19%  Similarity=0.190  Sum_probs=68.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-h
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l  148 (250)
                      ..++|+|+    |+ |.+|..+++.|.+.|++|++++|+++..+.+..          ..++..+.+|   .+.+.++ +
T Consensus        18 ~~~~v~Ii----G~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~   82 (155)
T 2g1u_A           18 KSKYIVIF----GC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGM   82 (155)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTG
T ss_pred             CCCcEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCc
Confidence            45799999    75 999999999999999999999998876654321          1244555565   4445543 3


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~iSS  187 (250)
                      .+  +|+||.+.+. ......+++.++. .+..++|....
T Consensus        83 ~~--ad~Vi~~~~~-~~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           83 EK--ADMVFAFTND-DSTNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             GG--CSEEEECSSC-HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             cc--CCEEEEEeCC-cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            33  7999999874 3345566677776 66667766554

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.45  E-value=1.6e-07  Score=82.44  Aligned_cols=151  Identities=12%  Similarity=0.094  Sum_probs=90.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-------eEEEEEcC----CCcccc----CCCCCCCcccchhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-------EVTIMTVG----DENSDK----MKKPPFNRFNEIVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-------~V~~l~R~----~~~~~~----~~~~~~~~~~~~~~~~v~~v  137 (250)
                      +++||+||    ||+|++|++++..|+.+|+       +|+++++.    .++.+.    +.+..+         .....
T Consensus         4 ~~~KI~Vi----GaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~---------~~~~~   70 (329)
T 1b8p_A            4 TPMRVAVT----GAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF---------PLLAG   70 (329)
T ss_dssp             CCEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC---------TTEEE
T ss_pred             CCCEEEEE----CCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc---------cccCc
Confidence            35799999    9999999999999999885       89999887    322211    111000         01111


Q ss_pred             eCCHHHHHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCC-CC-EEEEEcCcc------cccCCC
Q 025587          138 WGDPAEVGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSG-VK-QFLFISSAG------IYKPAD  195 (250)
Q Consensus       138 ~~D~~~l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~-~~-~~v~iSS~~------vy~~~~  195 (250)
                      ..+.+++.+++++  .|+|||+||              .|+..++++++.+.+.+ .+ +||++|...      ++....
T Consensus        71 i~~~~~~~~al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~  148 (329)
T 1b8p_A           71 MTAHADPMTAFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAP  148 (329)
T ss_dssp             EEEESSHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             EEEecCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcC
Confidence            1123456777887  699999998              36778999999999874 55 888888621      011111


Q ss_pred             CCCccCCCCCCCC-CChhHHHHHHHH-hCCcEEEEecCeeecCCCCC
Q 025587          196 EPPHVEGDVVKPD-AGHVQVEKYISE-NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       196 ~~~~~e~~~~~~~-~~~y~~~k~~~e-~~~~~~ilRp~~i~G~~~~~  240 (250)
                      +.|  ........ .........+++ .+++...++..+|+|.+.+.
T Consensus       149 ~~p--~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~s  193 (329)
T 1b8p_A          149 SLP--AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPT  193 (329)
T ss_dssp             TSC--GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSSTT
T ss_pred             CCC--HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCCc
Confidence            111  11111100 011122333333 57777777777789976543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.39  E-value=2.2e-07  Score=79.90  Aligned_cols=80  Identities=20%  Similarity=0.239  Sum_probs=58.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ++++||||    ||+|++|+++++.|+++|++|++++|+.++.+.+.+.    +..... .-+..+..|.+++.++++. 
T Consensus       118 ~gk~vlVt----GaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~-  188 (287)
T 1lu9_A          118 KGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS----VNKRFKVNVTAAETADDASRAEAVKG-  188 (287)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHHTCCCEEEECCSHHHHHHHTTT-
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH----HHhcCCcEEEEecCCCHHHHHHHHHh-
Confidence            46899999    9999999999999999999999999986544432110    000001 1122445567888888877 


Q ss_pred             cccEEEeCCCc
Q 025587          152 TFDVVLDNNGK  162 (250)
Q Consensus       152 ~~d~Vi~~ag~  162 (250)
                       +|+|||++|.
T Consensus       189 -~DvlVn~ag~  198 (287)
T 1lu9_A          189 -AHFVFTAGAI  198 (287)
T ss_dssp             -CSEEEECCCT
T ss_pred             -CCEEEECCCc
Confidence             7999999974

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.37  E-value=1.3e-06  Score=79.97  Aligned_cols=91  Identities=22%  Similarity=0.213  Sum_probs=66.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++|+|+    | +|++|+++++.|++.|++|++++|+.++.+.+.+.    +     .++..+.+|   .+++.+++++
T Consensus         3 ~k~VlVi----G-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~-----~~~~~~~~Dv~d~~~l~~~l~~   68 (450)
T 1ff9_A            3 TKSVLML----G-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----V-----QHSTPISLDVNDDAALDAEVAK   68 (450)
T ss_dssp             CCEEEEE----C-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----C-----TTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----c-----CCceEEEeecCCHHHHHHHHcC
Confidence            4789999    8 79999999999999999999999987655544321    0     123344444   6778888875


Q ss_pred             CcccEEEeCCCcC----------------------HHhHHHHHHHHHhCCCC
Q 025587          151 VTFDVVLDNNGKN----------------------LDAVRPVADWAKSSGVK  180 (250)
Q Consensus       151 ~~~d~Vi~~ag~~----------------------~~~~~~ll~~~~~~~~~  180 (250)
                        +|+|||+++..                      ...+.+++++|+++|++
T Consensus        69 --~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           69 --HDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             --SSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             --CcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence              89999999832                      12456777888887763

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.34  E-value=1.9e-07  Score=81.49  Aligned_cols=104  Identities=15%  Similarity=0.133  Sum_probs=69.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEc--CCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      |||+||    ||+|++|++++..|+.+|+  ++.++++  ..+..+..... ..........++.+... .+++.+++++
T Consensus         1 mKI~V~----GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~d-l~~~~~~~~~~~~i~~~-~d~l~~al~g   74 (313)
T 1hye_A            1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLRED-IYDALAGTRSDANIYVE-SDENLRIIDE   74 (313)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHH-HHHHHTTSCCCCEEEEE-ETTCGGGGTT
T ss_pred             CEEEEE----CCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHH-HHHhHHhcCCCeEEEeC-CcchHHHhCC
Confidence            489999    9999999999999999884  6888887  43212110000 00000001112232221 2235667777


Q ss_pred             CcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          151 VTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                        .|+|||+||              .|+..++++++++++.+ +.+|+++|
T Consensus        75 --aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S  122 (313)
T 1hye_A           75 --SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (313)
T ss_dssp             --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence              699999998              37888999999999988 88888887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.34  E-value=1.7e-06  Score=76.81  Aligned_cols=96  Identities=26%  Similarity=0.217  Sum_probs=69.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..++|||+|+    |+ |++|+.+++.|.+ .++|++.+|+.+..+.+.+.         ...+.++..|.+++.+++++
T Consensus        13 ~g~~mkilvl----Ga-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~---------~~~~~~d~~d~~~l~~~~~~   77 (365)
T 3abi_A           13 EGRHMKVLIL----GA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEF---------ATPLKVDASNFDKLVEVMKE   77 (365)
T ss_dssp             ---CCEEEEE----CC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTT---------SEEEECCTTCHHHHHHHHTT
T ss_pred             cCCccEEEEE----CC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhcc---------CCcEEEecCCHHHHHHHHhC
Confidence            3456799999    98 9999999998754 68999999987665543211         01122333468899999987


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                        .|+||++++...  ...++++|.++|+ ++|=+|
T Consensus        78 --~DvVi~~~p~~~--~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           78 --FELVIGALPGFL--GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             --CSEEEECCCGGG--HHHHHHHHHHHTC-EEEECC
T ss_pred             --CCEEEEecCCcc--cchHHHHHHhcCc-ceEeee
Confidence              699999998653  4578899999886 777655

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.33  E-value=2.2e-06  Score=71.39  Aligned_cols=72  Identities=18%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             cCcEEEEEecCCCc----------------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE
Q 025587           73 EKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~  136 (250)
                      .+|+||||    ||                +|.+|.+++++|+++|++|+++.|.......            ...++..
T Consensus         2 ~gk~vlVT----gG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------------~~~~~~~   65 (232)
T 2gk4_A            2 NAMKILVT----SGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------------PHPNLSI   65 (232)
T ss_dssp             -CCEEEEE----CSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------------CCTTEEE
T ss_pred             CCCEEEEe----CCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------CCCCeEE
Confidence            46899999    88                9999999999999999999999997632110            0124454


Q ss_pred             EeCC-H----HHHHhhhcCCcccEEEeCCCc
Q 025587          137 VWGD-P----AEVGNVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       137 v~~D-~----~~l~~~l~~~~~d~Vi~~ag~  162 (250)
                      +..+ .    +.+.+.+.+  +|++|++|++
T Consensus        66 ~~v~s~~em~~~v~~~~~~--~Dili~aAAv   94 (232)
T 2gk4_A           66 REITNTKDLLIEMQERVQD--YQVLIHSMAV   94 (232)
T ss_dssp             EECCSHHHHHHHHHHHGGG--CSEEEECSBC
T ss_pred             EEHhHHHHHHHHHHHhcCC--CCEEEEcCcc
Confidence            4444 2    333333433  7999999994

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.33  E-value=4.2e-07  Score=78.92  Aligned_cols=99  Identities=16%  Similarity=0.170  Sum_probs=68.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEc--CCCccccCCCCCCCcccch--hcCCceEEeCCHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTV--GDENSDKMKKPPFNRFNEI--VSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R--~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~~l~~~l  148 (250)
                      +||+||    ||+|++|..++..|+.+|+  +++++++  .++..+...    ..+.+.  ...++++..+|    .+++
T Consensus         1 mKI~Ii----GAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~----~dl~~~~~~~~~~~v~~~~----~~a~   68 (303)
T 1o6z_A            1 TKVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA----ADTNHGIAYDSNTRVRQGG----YEDT   68 (303)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH----HHHHHHHTTTCCCEEEECC----GGGG
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHH----HHHHHHHhhCCCcEEEeCC----HHHh
Confidence            589999    9999999999999998885  6888887  433221100    001110  01233433333    4456


Q ss_pred             cCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ++  .|+|||++|              .|+..++++++++++.+.+.+|+++|
T Consensus        69 ~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           69 AG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            66  699999998              35778999999999988888888877

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.30  E-value=6e-07  Score=81.04  Aligned_cols=99  Identities=15%  Similarity=0.121  Sum_probs=70.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      +++|+|+    || |+||+.+++.|++.|   .+|++.+|+.++.+.+.+.    +.......+..+..|   .+++.++
T Consensus         1 M~kVlIi----Ga-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~----l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            1 MAKVLQI----GA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS----IKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             -CEEEEE----CC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH----HHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH----hhhhcCCceEEEEecCCCHHHHHHH
Confidence            3689999    98 999999999999998   3899999987665533211    000001235555555   7888888


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      +++.++|+|||+++...  ...++++|.+.|+ ++|-
T Consensus        72 l~~~~~DvVin~ag~~~--~~~v~~a~l~~g~-~vvD  105 (405)
T 4ina_A           72 INEVKPQIVLNIALPYQ--DLTIMEACLRTGV-PYLD  105 (405)
T ss_dssp             HHHHCCSEEEECSCGGG--HHHHHHHHHHHTC-CEEE
T ss_pred             HHhhCCCEEEECCCccc--ChHHHHHHHHhCC-CEEE
Confidence            87656899999999643  4678888888887 4443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.27  E-value=8.4e-07  Score=71.60  Aligned_cols=101  Identities=14%  Similarity=0.158  Sum_probs=66.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++|||+    ||+|.||..+++.+...|++|++++|+++..+...+.         .....++..|   .+.+.+...
T Consensus        38 ~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~---------g~~~~~d~~~~~~~~~~~~~~~  104 (198)
T 1pqw_A           38 PGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL---------GVEYVGDSRSVDFADEILELTD  104 (198)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT---------CCSEEEETTCSTHHHHHHHHTT
T ss_pred             CCCEEEEe----eCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc---------CCCEEeeCCcHHHHHHHHHHhC
Confidence            46899999    9999999999999999999999999986544322111         1111122223   234444444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      +..+|+||+++|.  ......++.++..  +++|.+++...
T Consensus       105 ~~~~D~vi~~~g~--~~~~~~~~~l~~~--G~~v~~g~~~~  141 (198)
T 1pqw_A          105 GYGVDVVLNSLAG--EAIQRGVQILAPG--GRFIELGKKDV  141 (198)
T ss_dssp             TCCEEEEEECCCT--HHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred             CCCCeEEEECCch--HHHHHHHHHhccC--CEEEEEcCCCC
Confidence            4459999999983  3444555555443  48999887653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.24  E-value=4.5e-06  Score=64.65  Aligned_cols=95  Identities=13%  Similarity=0.205  Sum_probs=65.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-h
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l  148 (250)
                      +++|+|+    |+ |.+|+.+++.|.+.|++|+++++++ +..+.+        ......++.++.+|   ++.+.++ +
T Consensus         3 ~~~vlI~----G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~--------~~~~~~~~~~i~gd~~~~~~l~~a~i   69 (153)
T 1id1_A            3 KDHFIVC----GH-SILAINTILQLNQRGQNVTVISNLPEDDIKQL--------EQRLGDNADVIPGDSNDSSVLKKAGI   69 (153)
T ss_dssp             CSCEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHH--------HHHHCTTCEEEESCTTSHHHHHHHTT
T ss_pred             CCcEEEE----CC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHH--------HHhhcCCCeEEEcCCCCHHHHHHcCh
Confidence            4689999    75 9999999999999999999999974 322211        11123467788887   5666665 5


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEE
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLF  184 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~  184 (250)
                      ++  .|+||-+.+.+ .....+...+++. +..++|.
T Consensus        70 ~~--ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~ii~  103 (153)
T 1id1_A           70 DR--CRAILALSDND-ADNAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             TT--CSEEEECSSCH-HHHHHHHHHHHHHTSSSCEEE
T ss_pred             hh--CCEEEEecCCh-HHHHHHHHHHHHHCCCCEEEE
Confidence            55  79999887744 3445555666664 5556654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.16  E-value=1.7e-05  Score=63.05  Aligned_cols=93  Identities=20%  Similarity=0.212  Sum_probs=66.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-  147 (250)
                      .+++|+|+    | .|.+|..+++.|.+. |++|++++++++..+.           +...++.++.+|   .+.+.++ 
T Consensus        38 ~~~~v~Ii----G-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-----------~~~~g~~~~~gd~~~~~~l~~~~  101 (183)
T 3c85_A           38 GHAQVLIL----G-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ-----------HRSEGRNVISGDATDPDFWERIL  101 (183)
T ss_dssp             TTCSEEEE----C-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-----------HHHTTCCEEECCTTCHHHHHTBC
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-----------HHHCCCCEEEcCCCCHHHHHhcc
Confidence            35689999    7 699999999999999 9999999998755442           223456667776   4445554 


Q ss_pred             -hcCCcccEEEeCCCcCHHhHHHHHHHHHhCC-CCEEEE
Q 025587          148 -VGGVTFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLF  184 (250)
Q Consensus       148 -l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~-~~~~v~  184 (250)
                       +.+  .|+||.+.+. ......++..+++.+ ..++|.
T Consensus       102 ~~~~--ad~vi~~~~~-~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A          102 DTGH--VKLVLLAMPH-HQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             SCCC--CCEEEECCSS-HHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCC--CCEEEEeCCC-hHHHHHHHHHHHHHCCCCEEEE
Confidence             444  7999988763 445566677788766 445554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.13  E-value=1e-05  Score=67.18  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=48.6

Q ss_pred             cCcEEEEEecCCCc----------------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE
Q 025587           73 EKKKVLIVNTNSGG----------------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg----------------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~  136 (250)
                      .+|+||||    ||                +|.+|.+++++|+++|++|+++.+... .+    .         ..++..
T Consensus         7 ~gk~vlVT----gG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~----~---------~~g~~~   68 (226)
T 1u7z_A            7 KHLNIMIT----AGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP----T---------PPFVKR   68 (226)
T ss_dssp             TTCEEEEE----ESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC----C---------CTTEEE
T ss_pred             CCCEEEEE----CCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc----c---------CCCCeE
Confidence            46899999    99                699999999999999999999987652 11    0         012232


Q ss_pred             -EeCCHHHHHhhhc-C-CcccEEEeCCCc
Q 025587          137 -VWGDPAEVGNVVG-G-VTFDVVLDNNGK  162 (250)
Q Consensus       137 -v~~D~~~l~~~l~-~-~~~d~Vi~~ag~  162 (250)
                       ...+.+++.+.+. . ..+|++|++||+
T Consensus        69 ~dv~~~~~~~~~v~~~~~~~Dili~~Aav   97 (226)
T 1u7z_A           69 VDVMTALEMEAAVNASVQQQNIFIGCAAV   97 (226)
T ss_dssp             EECCSHHHHHHHHHHHGGGCSEEEECCBC
T ss_pred             EccCcHHHHHHHHHHhcCCCCEEEECCcc
Confidence             2233333333321 1 138999999994

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.12  E-value=1.6e-05  Score=60.69  Aligned_cols=94  Identities=14%  Similarity=0.171  Sum_probs=64.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .++++|+|+    | .|.+|..+++.|.+.|++|++++++++..+.           +...++.++.+|   ++.+.++ 
T Consensus         5 ~~~~~viIi----G-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~-----------~~~~g~~~i~gd~~~~~~l~~a-   67 (140)
T 3fwz_A            5 DICNHALLV----G-YGRVGSLLGEKLLASDIPLVVIETSRTRVDE-----------LRERGVRAVLGNAANEEIMQLA-   67 (140)
T ss_dssp             CCCSCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-----------HHHTTCEEEESCTTSHHHHHHT-
T ss_pred             cCCCCEEEE----C-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-----------HHHcCCCEEECCCCCHHHHHhc-
Confidence            345789999    6 5999999999999999999999998865543           233477788887   4444443 


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEE
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFL  183 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v  183 (250)
                      .-.+.|+||-+.+.+.. ...++..+++. +..++|
T Consensus        68 ~i~~ad~vi~~~~~~~~-n~~~~~~a~~~~~~~~ii  102 (140)
T 3fwz_A           68 HLECAKWLILTIPNGYE-AGEIVASARAKNPDIEII  102 (140)
T ss_dssp             TGGGCSEEEECCSCHHH-HHHHHHHHHHHCSSSEEE
T ss_pred             CcccCCEEEEECCChHH-HHHHHHHHHHHCCCCeEE
Confidence            22247999988875433 33344555553 333554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.11  E-value=1.3e-05  Score=65.75  Aligned_cols=93  Identities=24%  Similarity=0.340  Sum_probs=65.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~~  150 (250)
                      |+|+|+    |+ |.+|+++++.|.++|++|++++++++..+.+.          ...++.++.+|   ++.+.++ +.+
T Consensus         1 M~iiIi----G~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~----------~~~~~~~i~gd~~~~~~l~~a~i~~   65 (218)
T 3l4b_C            1 MKVIII----GG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFA----------KKLKATIIHGDGSHKEILRDAEVSK   65 (218)
T ss_dssp             CCEEEE----CC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----------HHSSSEEEESCTTSHHHHHHHTCCT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH----------HHcCCeEEEcCCCCHHHHHhcCccc
Confidence            579999    85 99999999999999999999999876554221          12356788887   5556554 333


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLFI  185 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~i  185 (250)
                        .|+||-+.+.+. ....+...+++ .+..++|-.
T Consensus        66 --ad~vi~~~~~d~-~n~~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           66 --NDVVVILTPRDE-VNLFIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             --TCEEEECCSCHH-HHHHHHHHHHHTSCCCEEEEC
T ss_pred             --CCEEEEecCCcH-HHHHHHHHHHHHcCCCeEEEE
Confidence              799998877543 23344455555 567676643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.02  E-value=3.5e-05  Score=83.92  Aligned_cols=80  Identities=14%  Similarity=0.153  Sum_probs=56.5

Q ss_pred             ccCcEEEEEecCCCcchh-hHHHHHHHHHhCCCeEEEEEcCCCc-----cccCCCCCCCcccchh--cCCceEEeCC---
Q 025587           72 AEKKKVLIVNTNSGGHAV-IGFYLAKELLGSGHEVTIMTVGDEN-----SDKMKKPPFNRFNEIV--SAGGKTVWGD---  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~-iG~~l~~~Ll~~G~~V~~l~R~~~~-----~~~~~~~~~~~~~~~~--~~~v~~v~~D---  140 (250)
                      .++|++|||    ||+++ ||+++++.|+++|++|++.+|+.+.     .+.+.+       ++.  ...+..+.+|   
T Consensus      2134 l~gKvaLVT----GAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~-------~l~~~G~~~~~v~~Dvtd 2202 (3089)
T 3zen_D         2134 XXDEVAVVT----GASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYR-------DHARFDATLWVVPANMAS 2202 (3089)
T ss_dssp             CCCCEEEEE----SCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHH-------HHCCTTCEEEEEECCTTC
T ss_pred             CCCCEEEEe----CCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHH-------HHhhcCCeEEEEEecCCC
Confidence            357899999    99999 9999999999999999999998765     222110       111  1223445555   


Q ss_pred             HHHHHhhhc---C------CcccEEEeCCCc
Q 025587          141 PAEVGNVVG---G------VTFDVVLDNNGK  162 (250)
Q Consensus       141 ~~~l~~~l~---~------~~~d~Vi~~ag~  162 (250)
                      .+++.++++   .      ..+|++|||||+
T Consensus      2203 ~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2203 YSDIDKLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             HHHHHHHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred             HHHHHHHHHHHHhhhhhhcCCCCEEEECCCc
Confidence            666666542   1      258999999995

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.00  E-value=1.3e-05  Score=73.59  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=55.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++++|+|+    |+ |++|+.+++.|++. |++|++++|+.++.+.+.+.          .++..+..|   .+++.+++
T Consensus        22 ~~k~VlIi----GA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----------~~~~~~~~D~~d~~~l~~~l   86 (467)
T 2axq_A           22 MGKNVLLL----GS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----------SGSKAISLDVTDDSALDKVL   86 (467)
T ss_dssp             -CEEEEEE----CC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----------GTCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----------cCCcEEEEecCCHHHHHHHH
Confidence            35789999    87 99999999999998 79999999987655433211          134444444   66788888


Q ss_pred             cCCcccEEEeCCCcC
Q 025587          149 GGVTFDVVLDNNGKN  163 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~  163 (250)
                      ++  +|+||++++..
T Consensus        87 ~~--~DvVIn~tp~~   99 (467)
T 2axq_A           87 AD--NDVVISLIPYT   99 (467)
T ss_dssp             HT--SSEEEECSCGG
T ss_pred             cC--CCEEEECCchh
Confidence            76  79999999843

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.90  E-value=1e-05  Score=70.43  Aligned_cols=99  Identities=13%  Similarity=0.146  Sum_probs=66.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..++|||+    ||+|.||..+++.+...|++|++++|++++.+...+         ......+...|   .+.+.+...
T Consensus       140 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          140 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK---------AGAWQVINYREEDLVERLKEITG  206 (327)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---------cCCCEEEECCCccHHHHHHHHhC
Confidence            46899999    999999999999999999999999998654432211         11111222223   334444444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|  .......++.++..  +++|.+++.
T Consensus       207 ~~~~D~vi~~~g--~~~~~~~~~~l~~~--G~iv~~g~~  241 (327)
T 1qor_A          207 GKKVRVVYDSVG--RDTWERSLDCLQRR--GLMVSFGNS  241 (327)
T ss_dssp             TCCEEEEEECSC--GGGHHHHHHTEEEE--EEEEECCCT
T ss_pred             CCCceEEEECCc--hHHHHHHHHHhcCC--CEEEEEecC
Confidence            446999999999  34455555655543  488888764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.87  E-value=1.3e-05  Score=69.83  Aligned_cols=99  Identities=20%  Similarity=0.232  Sum_probs=66.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..++|||+    ||+|.||..+++.+...|++|++++|+++..+.+.+         ......+...|   .+.+.+...
T Consensus       145 ~g~~vlV~----Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~---------~g~~~~~d~~~~~~~~~i~~~~~  211 (333)
T 1wly_A          145 PGDYVLIH----AAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK---------LGCHHTINYSTQDFAEVVREITG  211 (333)
T ss_dssp             TTCEEEET----TTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHHHT
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------cCCCEEEECCCHHHHHHHHHHhC
Confidence            46799999    999999999999999999999999998754432211         11111122222   344555544


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|.  ......++.++..  +++|.++..
T Consensus       212 ~~~~d~vi~~~g~--~~~~~~~~~l~~~--G~iv~~g~~  246 (333)
T 1wly_A          212 GKGVDVVYDSIGK--DTLQKSLDCLRPR--GMCAAYGHA  246 (333)
T ss_dssp             TCCEEEEEECSCT--TTHHHHHHTEEEE--EEEEECCCT
T ss_pred             CCCCeEEEECCcH--HHHHHHHHhhccC--CEEEEEecC
Confidence            4469999999996  3445555555543  478888764

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.82  E-value=3.7e-05  Score=63.58  Aligned_cols=91  Identities=15%  Similarity=0.174  Sum_probs=62.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-h
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-V  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l  148 (250)
                      ..++|+|+    |+ |.+|+.+++.|.+.|+ |++++++++..+.           +. .++.++.+|   ++.+.++ +
T Consensus         8 ~~~~viI~----G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~-----------~~-~~~~~i~gd~~~~~~l~~a~i   69 (234)
T 2aef_A            8 KSRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRKKV-----------LR-SGANFVHGDPTRVSDLEKANV   69 (234)
T ss_dssp             --CEEEEE----SC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH-----------HH-TTCEEEESCTTCHHHHHHTTC
T ss_pred             CCCEEEEE----CC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH-----------Hh-cCCeEEEcCCCCHHHHHhcCc
Confidence            35789999    76 9999999999999999 9999988755432           22 467788887   4555555 4


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCC-EEEE
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLF  184 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~-~~v~  184 (250)
                      .+  .|.||.+.+.+ .....+...+++.+.+ ++|.
T Consensus        70 ~~--ad~vi~~~~~d-~~n~~~~~~a~~~~~~~~iia  103 (234)
T 2aef_A           70 RG--ARAVIVDLESD-SETIHCILGIRKIDESVRIIA  103 (234)
T ss_dssp             TT--CSEEEECCSCH-HHHHHHHHHHHHHCSSSEEEE
T ss_pred             ch--hcEEEEcCCCc-HHHHHHHHHHHHHCCCCeEEE
Confidence            44  79999887643 3334445556665544 4443

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.81  E-value=0.00012  Score=63.16  Aligned_cols=106  Identities=17%  Similarity=0.188  Sum_probs=67.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCccc---ch-hcCCceEE-eCCHHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFN---EI-VSAGGKTV-WGDPAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~---~~-~~~~v~~v-~~D~~~l~~  146 (250)
                      .|.+||-++     |.|.+|..+++.|++.||+|++.+|++++.+.+.+.......   ++ ...++.+. ..|.+.+.+
T Consensus         3 ~Ms~kIgfI-----GLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~   77 (297)
T 4gbj_A            3 AMSEKIAFL-----GLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEE   77 (297)
T ss_dssp             -CCCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHH
T ss_pred             CCCCcEEEE-----ecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHH
Confidence            466789999     689999999999999999999999999887776544332211   21 12333322 234444444


Q ss_pred             hhcC------CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          147 VVGG------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       147 ~l~~------~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .+.+      .+-+++|++..+.+..++.+.+.+.+.|+ +||
T Consensus        78 v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~-~~l  119 (297)
T 4gbj_A           78 LFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGA-HYV  119 (297)
T ss_dssp             HSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCC-cee
Confidence            3311      12468999999999999999999999886 555

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.75  E-value=2.2e-05  Score=69.11  Aligned_cols=98  Identities=12%  Similarity=0.124  Sum_probs=63.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      ++|||+    ||+|.||..+++.+...|+ +|+++++++++.+.+.+.        ......+...|   .+.+.+...+
T Consensus       162 ~~vlI~----GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~--------~g~~~~~d~~~~~~~~~~~~~~~~  229 (357)
T 2zb4_A          162 KTMVVS----GAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE--------LGFDAAINYKKDNVAEQLRESCPA  229 (357)
T ss_dssp             CEEEES----STTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------SCCSEEEETTTSCHHHHHHHHCTT
T ss_pred             cEEEEE----CCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH--------cCCceEEecCchHHHHHHHHhcCC
Confidence            899999    9999999999999999999 999999986544322110        01111122222   2344444444


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                       .+|+||+++|.  ......++.++..  +++|.++...
T Consensus       230 -~~d~vi~~~G~--~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          230 -GVDVYFDNVGG--NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             -CEEEEEESCCH--HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             -CCCEEEECCCH--HHHHHHHHHhccC--cEEEEECCcc
Confidence             69999999993  3344444444432  5888887654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.74  E-value=4e-05  Score=67.51  Aligned_cols=99  Identities=12%  Similarity=0.098  Sum_probs=66.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++|||+    ||+|.||..+++.+...|++|++++|++++.+.+.+         ...+..+...|   .+.+.+...
T Consensus       162 ~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~  228 (354)
T 2j8z_A          162 AGDYVLIH----AGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK---------LGAAAGFNYKKEDFSEATLKFTK  228 (354)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---------cCCcEEEecCChHHHHHHHHHhc
Confidence            46799999    999999999999999999999999998755442210         11111222222   344444444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|..  .....++.++..  ++++.++..
T Consensus       229 ~~~~d~vi~~~G~~--~~~~~~~~l~~~--G~iv~~G~~  263 (354)
T 2j8z_A          229 GAGVNLILDCIGGS--YWEKNVNCLALD--GRWVLYGLM  263 (354)
T ss_dssp             TSCEEEEEESSCGG--GHHHHHHHEEEE--EEEEECCCT
T ss_pred             CCCceEEEECCCch--HHHHHHHhccCC--CEEEEEecc
Confidence            44699999999963  344455555543  478887753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.74  E-value=2.8e-05  Score=68.10  Aligned_cols=100  Identities=16%  Similarity=0.192  Sum_probs=67.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..++|||+    ||+|.+|..+++.+...|++|++++|++++.+.+.+         ......+...|   .+.+.+...
T Consensus       166 ~g~~vlV~----Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~---------~ga~~~~d~~~~~~~~~~~~~~~  232 (343)
T 2eih_A          166 PGDDVLVM----AAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA---------LGADETVNYTHPDWPKEVRRLTG  232 (343)
T ss_dssp             TTCEEEEC----STTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---------HTCSEEEETTSTTHHHHHHHHTT
T ss_pred             CCCEEEEE----CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---------cCCCEEEcCCcccHHHHHHHHhC
Confidence            46799999    999999999999999999999999998755442211         11111122222   234444444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +..+|+||+++|.  ......++.++..  +++|.++...
T Consensus       233 ~~~~d~vi~~~g~--~~~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          233 GKGADKVVDHTGA--LYFEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             TTCEEEEEESSCS--SSHHHHHHHEEEE--EEEEESSCCC
T ss_pred             CCCceEEEECCCH--HHHHHHHHhhccC--CEEEEEecCC
Confidence            4469999999992  3455566666554  4888887643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.70  E-value=1.3e-05  Score=69.89  Aligned_cols=100  Identities=14%  Similarity=0.135  Sum_probs=63.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~  147 (250)
                      ..+++|||+    ||+|.||..+++.+...|++|++++|+++..+...+.         .....++..|    .+.+.+.
T Consensus       144 ~~g~~vlV~----Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~---------g~~~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          144 KGGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI---------GFDAAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             CSSCEEEEE----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---------TCSEEEETTSCSCHHHHHHHH
T ss_pred             CCCCEEEEe----cCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc---------CCcEEEecCCHHHHHHHHHHH
Confidence            346899999    9999999999999999999999999876544422110         1111222223    2233333


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .. ..+|+||+++|..  .....++.++.  -++++.++...
T Consensus       211 ~~-~~~d~vi~~~g~~--~~~~~~~~l~~--~G~~v~~g~~~  247 (333)
T 1v3u_A          211 SP-DGYDCYFDNVGGE--FLNTVLSQMKD--FGKIAICGAIS  247 (333)
T ss_dssp             CT-TCEEEEEESSCHH--HHHHHHTTEEE--EEEEEECCCCC
T ss_pred             hC-CCCeEEEECCChH--HHHHHHHHHhc--CCEEEEEeccc
Confidence            33 2599999999942  23333333333  24888887654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.69  E-value=5.9e-05  Score=65.74  Aligned_cols=100  Identities=20%  Similarity=0.162  Sum_probs=67.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..+++|||+    ||+|.+|...++.+...|.+|+++++++++.+...+.         ..+..+...+   .+.+.+..
T Consensus       147 ~~g~~vlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---------ga~~~~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          147 KKGDYVLLF----AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY---------GAEYLINASKEDILRQVLKFT  213 (334)
T ss_dssp             CTTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---------TCSEEEETTTSCHHHHHHHHT
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc---------CCcEEEeCCCchHHHHHHHHh
Confidence            346899999    9999999999999999999999999977554422111         1111122222   44555555


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+..+|+||+++|.  ......++.++..  +++|.++..
T Consensus       214 ~~~g~D~vid~~g~--~~~~~~~~~l~~~--G~iv~~G~~  249 (334)
T 3qwb_A          214 NGKGVDASFDSVGK--DTFEISLAALKRK--GVFVSFGNA  249 (334)
T ss_dssp             TTSCEEEEEECCGG--GGHHHHHHHEEEE--EEEEECCCT
T ss_pred             CCCCceEEEECCCh--HHHHHHHHHhccC--CEEEEEcCC
Confidence            55569999999995  4455566666553  478887753

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.69  E-value=8.8e-05  Score=64.54  Aligned_cols=99  Identities=22%  Similarity=0.238  Sum_probs=65.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccc--cCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      |||.|+    ||+|++|..++..|+..|  ++|+++++++....  .+.+.       .....++...+ .+++.+++++
T Consensus         1 mKI~Ii----Ga~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~-------~~~~~l~~~~~-t~d~~~a~~~   68 (314)
T 1mld_A            1 AKVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI-------ETRATVKGYLG-PEQLPDCLKG   68 (314)
T ss_dssp             CEEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS-------SSSCEEEEEES-GGGHHHHHTT
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhcc-------CcCceEEEecC-CCCHHHHhCC
Confidence            589999    999999999999999988  89999999761110  11110       00111222211 2456667777


Q ss_pred             CcccEEEeCCCc--------------CHHhHHHHHHHHHhCCC-CEEEEEcC
Q 025587          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGV-KQFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~-~~~v~iSS  187 (250)
                        .|+||+++|.              |...++.+++.+.+... .++|++|-
T Consensus        69 --aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           69 --CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             --CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             --CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence              6999999982              45678888888877553 36777653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.69  E-value=6.5e-05  Score=65.87  Aligned_cols=100  Identities=11%  Similarity=0.107  Sum_probs=64.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~  147 (250)
                      ..+++|||+    ||+|.||..+++.+...|++|++++|+++..+...+.         .....++..|    .+.+.++
T Consensus       168 ~~g~~vlV~----Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~---------g~~~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          168 MAGHWVAIS----GAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI---------GGEVFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT---------TCCEEEETTTCSCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc---------CCceEEecCccHhHHHHHHHH
Confidence            346899999    9999999999999999999999999987654322111         1111122222    2334444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+ .+|+||+++|.. ......++.++..  +++|.+++.
T Consensus       235 ~~~-~~D~vi~~~g~~-~~~~~~~~~l~~~--G~iv~~g~~  271 (347)
T 2hcy_A          235 TDG-GAHGVINVSVSE-AAIEASTRYVRAN--GTTVLVGMP  271 (347)
T ss_dssp             HTS-CEEEEEECSSCH-HHHHHHTTSEEEE--EEEEECCCC
T ss_pred             hCC-CCCEEEECCCcH-HHHHHHHHHHhcC--CEEEEEeCC
Confidence            444 699999999841 2233334444332  488888764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.65  E-value=3e-05  Score=67.59  Aligned_cols=102  Identities=17%  Similarity=0.206  Sum_probs=66.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC-CCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM-KKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ..+++|||+    ||+|.||..+++.+...|++|++++|++++.+.+ .+.         ..+..+...|   .+.+.+.
T Consensus       148 ~~g~~vlI~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          148 KNGETVVIS----GAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---------GFDGAIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---------CCSEEEETTTSCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------CCCEEEECCCHHHHHHHHHh
Confidence            346899999    9999999999999999999999999987655432 111         1111122222   3334443


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY  191 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy  191 (250)
                      . +..+|+||+++|.  ......++.++.  -+++|.++....+
T Consensus       215 ~-~~~~d~vi~~~g~--~~~~~~~~~l~~--~G~iv~~G~~~~~  253 (336)
T 4b7c_A          215 C-PKGIDVFFDNVGG--EILDTVLTRIAF--KARIVLCGAISQY  253 (336)
T ss_dssp             C-TTCEEEEEESSCH--HHHHHHHTTEEE--EEEEEECCCGGGG
T ss_pred             c-CCCceEEEECCCc--chHHHHHHHHhh--CCEEEEEeecccc
Confidence            3 3359999999994  333344444433  2589988876543

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.63  E-value=7.5e-05  Score=65.76  Aligned_cols=98  Identities=11%  Similarity=0.130  Sum_probs=64.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|++++.+...+.         .....+...|   .+.+.+...
T Consensus       170 ~g~~vlV~----GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---------ga~~~~d~~~~~~~~~~~~~~~  236 (351)
T 1yb5_A          170 AGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN---------GAHEVFNHREVNYIDKIKKYVG  236 (351)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---------TCSEEEETTSTTHHHHHHHHHC
T ss_pred             CcCEEEEE----CCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc---------CCCEEEeCCCchHHHHHHHHcC
Confidence            46799999    9999999999999999999999999987554422111         1111122223   334444444


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +..+|+||+++|..  .....++.++..  +++|.++.
T Consensus       237 ~~~~D~vi~~~G~~--~~~~~~~~l~~~--G~iv~~g~  270 (351)
T 1yb5_A          237 EKGIDIIIEMLANV--NLSKDLSLLSHG--GRVIVVGS  270 (351)
T ss_dssp             TTCEEEEEESCHHH--HHHHHHHHEEEE--EEEEECCC
T ss_pred             CCCcEEEEECCChH--HHHHHHHhccCC--CEEEEEec
Confidence            44699999999842  333344444442  47888774

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.62  E-value=4.3e-05  Score=66.41  Aligned_cols=100  Identities=15%  Similarity=0.117  Sum_probs=66.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..+++|||+    ||+|.+|..+++.+...|++|+++++++++.+...+         ...+..+...|   .+.+.+..
T Consensus       139 ~~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---------~Ga~~~~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          139 KPGEIILFH----AAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA---------LGAWETIDYSHEDVAKRVLELT  205 (325)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHHT
T ss_pred             CCCCEEEEE----cCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---------cCCCEEEeCCCccHHHHHHHHh
Confidence            346899999    999999999999999999999999988755442211         11111222222   44555555


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+..+|+||+++|.  ......++.++..  +++|.++..
T Consensus       206 ~~~g~Dvvid~~g~--~~~~~~~~~l~~~--G~iv~~g~~  241 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ--DTWLTSLDSVAPR--GLVVSFGNA  241 (325)
T ss_dssp             TTCCEEEEEESSCG--GGHHHHHTTEEEE--EEEEECCCT
T ss_pred             CCCCceEEEECCCh--HHHHHHHHHhcCC--CEEEEEecC
Confidence            55569999999995  3344445554443  578888754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.61  E-value=2.2e-05  Score=69.02  Aligned_cols=99  Identities=12%  Similarity=0.126  Sum_probs=66.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--e-----EEEEEcCCC--ccccCCCCCCCcccchhcC---Cce-EEeCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--E-----VTIMTVGDE--NSDKMKKPPFNRFNEIVSA---GGK-TVWGD  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~-----V~~l~R~~~--~~~~~~~~~~~~~~~~~~~---~v~-~v~~D  140 (250)
                      +++|+||    ||+|+||..++..|+..|.  +     ++++++.+.  ..+...       .++...   -.. +..  
T Consensus         3 ~~kV~V~----GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a-------~DL~~~~~~~~~~~~~--   69 (333)
T 5mdh_A            3 PIRVLVT----GAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVL-------MELQDCALPLLKDVIA--   69 (333)
T ss_dssp             CEEEEES----STTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH-------HHHHHTCCTTEEEEEE--
T ss_pred             CeEEEEE----CCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhH-------hhhHhhhhcccCCEEE--
Confidence            4799999    9999999999999998875  5     888888541  111100       001110   011 111  


Q ss_pred             HHHHHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC--EEEEEcC
Q 025587          141 PAEVGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVK--QFLFISS  187 (250)
Q Consensus       141 ~~~l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~--~~v~iSS  187 (250)
                      .++..+.+++  .|+||++||              .|...++.+++++++.+.+  ++|.+|-
T Consensus        70 ~~~~~~~~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           70 TDKEEIAFKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             ESCHHHHTTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cCCcHHHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            2234555666  699999998              3678899999999997764  5777664

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.55  E-value=0.00022  Score=64.35  Aligned_cols=93  Identities=17%  Similarity=0.278  Sum_probs=67.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +++|+|+    | .|.+|+.+++.|.+.|++|++++++++..+.           +...++.++.+|   ++.|.++ .-
T Consensus         4 ~~~viIi----G-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~-----------~~~~g~~vi~GDat~~~~L~~a-gi   66 (413)
T 3l9w_A            4 GMRVIIA----G-FGRFGQITGRLLLSSGVKMVVLDHDPDHIET-----------LRKFGMKVFYGDATRMDLLESA-GA   66 (413)
T ss_dssp             CCSEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHH-----------HHHTTCCCEESCTTCHHHHHHT-TT
T ss_pred             CCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHH-----------HHhCCCeEEEcCCCCHHHHHhc-CC
Confidence            4689999    6 5999999999999999999999999866553           234467788888   5555554 22


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCC-EEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLF  184 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~-~~v~  184 (250)
                      .+.|+||-+.+. ......++..+++.+.. ++|-
T Consensus        67 ~~A~~viv~~~~-~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           67 AKAEVLINAIDD-PQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             TTCSEEEECCSS-HHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CccCEEEECCCC-hHHHHHHHHHHHHhCCCCeEEE
Confidence            247999988763 45566677778776644 4444

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.54  E-value=6e-05  Score=66.97  Aligned_cols=100  Identities=20%  Similarity=0.237  Sum_probs=67.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+++|+|+    |+ |.||..+++.|...|++|++++|+++..+.+.        +.....+..+..+.+++.+.+.+ 
T Consensus       164 l~~~~V~Vi----Ga-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~--------~~~g~~~~~~~~~~~~l~~~~~~-  229 (369)
T 2eez_A          164 VAPASVVIL----GG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLD--------DVFGGRVITLTATEANIKKSVQH-  229 (369)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTTTSEEEEECCHHHHHHHHHH-
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH--------HhcCceEEEecCCHHHHHHHHhC-
Confidence            346899999    88 99999999999999999999999875443221        00112234455577888888875 


Q ss_pred             cccEEEeCCCcCHH-----hHHHHHHHHHhCCCCEEEEEcCc
Q 025587          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~-----~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       .|+||++++....     .+...++.+++  -..+|.+++.
T Consensus       230 -~DvVi~~~g~~~~~~~~li~~~~l~~mk~--gg~iV~v~~~  268 (369)
T 2eez_A          230 -ADLLIGAVLVPGAKAPKLVTRDMLSLMKE--GAVIVDVAVD  268 (369)
T ss_dssp             -CSEEEECCC-------CCSCHHHHTTSCT--TCEEEECC--
T ss_pred             -CCEEEECCCCCccccchhHHHHHHHhhcC--CCEEEEEecC
Confidence             7999999985421     13444555543  2478888864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.53  E-value=0.00013  Score=64.33  Aligned_cols=99  Identities=19%  Similarity=0.123  Sum_probs=66.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~  146 (250)
                      ..+++|||+    ||+|.+|..+++.+...|++|+++++++++.+...           ..+.. ++..+    .+.+.+
T Consensus       162 ~~g~~VlV~----Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-----------~~Ga~~~~~~~~~~~~~~~~~  226 (362)
T 2c0c_A          162 SEGKKVLVT----AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-----------SLGCDRPINYKTEPVGTVLKQ  226 (362)
T ss_dssp             CTTCEEEET----TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HcCCcEEEecCChhHHHHHHH
Confidence            346799999    99999999999999999999999998865443221           11222 22222    223333


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      . .+..+|+||+++|.  ......++.++..  +++|.++....
T Consensus       227 ~-~~~g~D~vid~~g~--~~~~~~~~~l~~~--G~iv~~g~~~~  265 (362)
T 2c0c_A          227 E-YPEGVDVVYESVGG--AMFDLAVDALATK--GRLIVIGFISG  265 (362)
T ss_dssp             H-CTTCEEEEEECSCT--HHHHHHHHHEEEE--EEEEECCCGGG
T ss_pred             h-cCCCCCEEEECCCH--HHHHHHHHHHhcC--CEEEEEeCCCC
Confidence            3 23358999999985  3455556666553  48998887543

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.52  E-value=2.3e-05  Score=68.61  Aligned_cols=99  Identities=14%  Similarity=0.102  Sum_probs=63.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC-CCCCCcccchhcCCceEEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-KPPFNRFNEIVSAGGKTVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~-~~~~~~~~~~~~~~v~~v~~D----~~~l~~~  147 (250)
                      .+++|||+    ||+|.+|..+++.+...|++|++++|++++.+.+. +.         .....+...|    .+.+.+.
T Consensus       155 ~g~~vlI~----Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---------g~~~~~d~~~~~~~~~~~~~~  221 (345)
T 2j3h_A          155 EGETVYVS----AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---------GFDDAFNYKEESDLTAALKRC  221 (345)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---------CCSEEEETTSCSCSHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------CCceEEecCCHHHHHHHHHHH
Confidence            46899999    99999999999999999999999999875544321 11         1111122222    2334333


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      . +..+|+||+++|.  ......++.++.  -++++.++...
T Consensus       222 ~-~~~~d~vi~~~g~--~~~~~~~~~l~~--~G~~v~~G~~~  258 (345)
T 2j3h_A          222 F-PNGIDIYFENVGG--KMLDAVLVNMNM--HGRIAVCGMIS  258 (345)
T ss_dssp             C-TTCEEEEEESSCH--HHHHHHHTTEEE--EEEEEECCCGG
T ss_pred             h-CCCCcEEEECCCH--HHHHHHHHHHhc--CCEEEEEcccc
Confidence            2 2358999999984  233344444433  24788877544

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.51  E-value=0.00026  Score=61.18  Aligned_cols=104  Identities=15%  Similarity=0.178  Sum_probs=75.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCc---ccch-hcCCce-EEeCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEI-VSAGGK-TVWGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~---~~~~-~~~~v~-~v~~D~~~l~~~l  148 (250)
                      +++|-++     |.|.+|..+++.|++.||+|++.+|++++.+.+.+.....   ..++ ...++. +...|.+.+++++
T Consensus         3 M~kIgfI-----GlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~   77 (300)
T 3obb_A            3 MKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLY   77 (300)
T ss_dssp             CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHH
T ss_pred             cCEEEEe-----eehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHH
Confidence            5789999     6999999999999999999999999987666543322111   1121 223333 2345777777776


Q ss_pred             cCC--------cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 GGV--------TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 ~~~--------~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .+.        +-++||++..+.+..++.+.+++++.|+ +||
T Consensus        78 ~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~-~~l  119 (300)
T 3obb_A           78 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AML  119 (300)
T ss_dssp             HSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             hchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            431        2368999999999999999999999886 454

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.49  E-value=0.00096  Score=55.94  Aligned_cols=108  Identities=18%  Similarity=0.260  Sum_probs=67.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc------------h--hcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE------------I--VSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~------------~--~~~~v~--  135 (250)
                      ..++|+|+    | .|.+|.++++.|+..|. +|++++++.-...++..+.+....+            +  ..++++  
T Consensus        30 ~~~~VlVv----G-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~  104 (249)
T 1jw9_B           30 KDSRVLIV----G-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT  104 (249)
T ss_dssp             HHCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCeEEEE----e-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEE
Confidence            35799999    6 68999999999999996 8999998763333332221111000            1  112333  


Q ss_pred             EEeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       136 ~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+..  +.+.+.+.+.+  +|+||++.. +...-..+.+++++.++ .+|..+..+
T Consensus       105 ~~~~~~~~~~~~~~~~~--~DvVi~~~d-~~~~~~~l~~~~~~~~~-p~i~~~~~g  156 (249)
T 1jw9_B          105 PVNALLDDAELAALIAE--HDLVLDCTD-NVAVRNQLNAGCFAAKV-PLVSGAAIR  156 (249)
T ss_dssp             EECSCCCHHHHHHHHHT--SSEEEECCS-SHHHHHHHHHHHHHHTC-CEEEEEEEB
T ss_pred             EEeccCCHhHHHHHHhC--CCEEEEeCC-CHHHHHHHHHHHHHcCC-CEEEeeecc
Confidence            3332  35567777776  799999975 45555566677777665 455554433

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.49  E-value=0.00012  Score=64.33  Aligned_cols=98  Identities=19%  Similarity=0.160  Sum_probs=65.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..++|||+    ||+|.||..+++.+...|++|+++++++++.+...+         ...+..+...+   .+.+.+.. 
T Consensus       167 ~g~~VlV~----Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---------lGa~~~~~~~~~~~~~~~~~~~-  232 (353)
T 4dup_A          167 EGESVLIH----GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER---------LGAKRGINYRSEDFAAVIKAET-  232 (353)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHHH-
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---------cCCCEEEeCCchHHHHHHHHHh-
Confidence            46799999    999999999999999999999999998755442211         11111122222   34444444 


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|..  .....++.++.  -++++.++..
T Consensus       233 ~~g~Dvvid~~g~~--~~~~~~~~l~~--~G~iv~~g~~  267 (353)
T 4dup_A          233 GQGVDIILDMIGAA--YFERNIASLAK--DGCLSIIAFL  267 (353)
T ss_dssp             SSCEEEEEESCCGG--GHHHHHHTEEE--EEEEEECCCT
T ss_pred             CCCceEEEECCCHH--HHHHHHHHhcc--CCEEEEEEec
Confidence            44699999999953  33444444444  2478887754

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.49  E-value=0.00031  Score=62.05  Aligned_cols=99  Identities=16%  Similarity=0.143  Sum_probs=62.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC------CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG------HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G------~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      +++|.|+    ||||++|+.+++.|++++      .+|+.+.+..+.-+.+.. ...++...  .++.+...|.++    
T Consensus         9 m~kVaIv----GATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~-~~~~l~~~--~~~~~~~~~~~~----   77 (352)
T 2nqt_A            9 ATKVAVA----GASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGE-HHPHLTPL--AHRVVEPTEAAV----   77 (352)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGG-TCTTCGGG--TTCBCEECCHHH----
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhh-hccccccc--ceeeeccCCHHH----
Confidence            4699999    999999999999999987      377777644321111110 00111110  123322234333    


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +.+  +|+||.+.|..  ....+++.+ +.|. ++|-+|+..
T Consensus        78 ~~~--~DvVf~alg~~--~s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           78 LGG--HDAVFLALPHG--HSAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             HTT--CSEEEECCTTS--CCHHHHHHS-CTTS-EEEECSSTT
T ss_pred             hcC--CCEEEECCCCc--chHHHHHHH-hCCC-EEEEECCCc
Confidence            344  79999998854  356677777 7775 788888864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.49  E-value=0.00014  Score=62.47  Aligned_cols=95  Identities=17%  Similarity=0.171  Sum_probs=62.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCH-HHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDP-AEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~-~~l~~~l~  149 (250)
                      ..+++|||+    ||+|.+|..+++.+...|++|+++++++++.+...           ..+.. ++..+. +++.+.++
T Consensus       124 ~~g~~vlV~----Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~~ga~~~~~~~~~~~~~~~~~  188 (302)
T 1iz0_A          124 RPGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-----------ALGAEEAATYAEVPERAKAWG  188 (302)
T ss_dssp             CTTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-----------HTTCSEEEEGGGHHHHHHHTT
T ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hcCCCEEEECCcchhHHHHhc
Confidence            346799999    99999999999999999999999999876554321           11222 222222 45555554


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                        .+|+||+ +|.  ......++.++..  ++++.++..
T Consensus       189 --~~d~vid-~g~--~~~~~~~~~l~~~--G~~v~~g~~  220 (302)
T 1iz0_A          189 --GLDLVLE-VRG--KEVEESLGLLAHG--GRLVYIGAA  220 (302)
T ss_dssp             --SEEEEEE-CSC--TTHHHHHTTEEEE--EEEEEC---
T ss_pred             --CceEEEE-CCH--HHHHHHHHhhccC--CEEEEEeCC
Confidence              3899999 886  3444555555443  478887654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.44  E-value=0.0017  Score=54.42  Aligned_cols=111  Identities=18%  Similarity=0.224  Sum_probs=69.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccch--------------hcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~--------------~~~~v~--  135 (250)
                      ..++|+|+    | .|.+|.++++.|+..|. ++++++++.-...++..+.+....++              ..++++  
T Consensus        27 ~~~~Vlvv----G-~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~  101 (251)
T 1zud_1           27 LDSQVLII----G-LGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLT  101 (251)
T ss_dssp             HTCEEEEE----C-CSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hcCcEEEE----c-cCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEE
Confidence            46799999    6 58899999999999995 78888876533333332211111110              112333  


Q ss_pred             EEeC--CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          136 TVWG--DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       136 ~v~~--D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      .+..  +.+.+.+.+.+  +|+||++.. +...-..+-++|.+.++ .+|..+..+.+|
T Consensus       102 ~~~~~~~~~~~~~~~~~--~DvVi~~~d-~~~~r~~l~~~~~~~~~-p~i~~~~~g~~G  156 (251)
T 1zud_1          102 ALQQRLTGEALKDAVAR--ADVVLDCTD-NMATRQEINAACVALNT-PLITASAVGFGG  156 (251)
T ss_dssp             EECSCCCHHHHHHHHHH--CSEEEECCS-SHHHHHHHHHHHHHTTC-CEEEEEEEBTEE
T ss_pred             EEeccCCHHHHHHHHhc--CCEEEECCC-CHHHHHHHHHHHHHhCC-CEEEEeccccce
Confidence            3322  35677777776  799999876 55555566677777765 467766554433

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.42  E-value=0.00032  Score=62.54  Aligned_cols=85  Identities=18%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH-hCCCeEEEEEcCCCccccCCCC-------CCCcccchhcCCceEEeCC---H
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL-GSGHEVTIMTVGDENSDKMKKP-------PFNRFNEIVSAGGKTVWGD---P  141 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll-~~G~~V~~l~R~~~~~~~~~~~-------~~~~~~~~~~~~v~~v~~D---~  141 (250)
                      .+|+||||    ||+..+|.+.+..|+ +.|.+|+++.+..+..++....       .+.+.-+........+.+|   .
T Consensus        49 ~pK~vLVt----GaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           49 APKNVLVL----GCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             CCCEEEEE----SCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             CCCEEEEE----CCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            47999999    999999999999998 6799999999877554421100       0000011123345567777   5


Q ss_pred             HHHHhhhcC-----CcccEEEeCCC
Q 025587          142 AEVGNVVGG-----VTFDVVLDNNG  161 (250)
Q Consensus       142 ~~l~~~l~~-----~~~d~Vi~~ag  161 (250)
                      +.++++++.     .++|++||+++
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A  149 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLA  149 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecc
Confidence            555555432     25999999998

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.41  E-value=0.00021  Score=62.35  Aligned_cols=86  Identities=16%  Similarity=0.183  Sum_probs=61.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~  149 (250)
                      .++|+|.    |+ |.+|+.++++|.++|+ |++++++++..+ +           ...++.++.+|   ++.+.++ ++
T Consensus       115 ~~~viI~----G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~-----------~~~~~~~i~gd~~~~~~L~~a~i~  176 (336)
T 1lnq_A          115 SRHVVIC----GW-SESTLECLRELRGSEV-FVLAEDENVRKK-V-----------LRSGANFVHGDPTRVSDLEKANVR  176 (336)
T ss_dssp             -CEEEEE----SC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-H-----------HHTTCEEEESCTTSHHHHHHTCST
T ss_pred             cCCEEEE----CC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-H-----------HhCCcEEEEeCCCCHHHHHhcChh
Confidence            4689999    74 9999999999999999 999988875443 2           23467888888   5566655 34


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      +  .|.|+-+.+.+ .....+...+++.+.+
T Consensus       177 ~--a~~vi~~~~~d-~~n~~~~~~ar~~~~~  204 (336)
T 1lnq_A          177 G--ARAVIVDLESD-SETIHCILGIRKIDES  204 (336)
T ss_dssp             T--EEEEEECCSSH-HHHHHHHHHHHTTCTT
T ss_pred             h--ccEEEEcCCcc-HHHHHHHHHHHHHCCC
Confidence            4  79999877643 3444455556665543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.40  E-value=0.0002  Score=62.75  Aligned_cols=95  Identities=13%  Similarity=0.137  Sum_probs=64.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-C---HHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-D---~~~l~~~l~  149 (250)
                      ++|||+    ||+|.+|...++.+...|.+|+++++++++.+.+.           ..+.. ++.. +   .+.+.+...
T Consensus       166 ~~vli~----gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-----------~~Ga~~~~~~~~~~~~~~v~~~~~  230 (349)
T 3pi7_A          166 KAFVMT----AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-----------DIGAAHVLNEKAPDFEATLREVMK  230 (349)
T ss_dssp             SEEEES----STTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-----------HHTCSEEEETTSTTHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCCCEEEECCcHHHHHHHHHHhc
Confidence            799999    99999999999999999999999998876544321           11222 2222 2   334444443


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|...  ....++.++.  -+++|.++..
T Consensus       231 ~~g~D~vid~~g~~~--~~~~~~~l~~--~G~iv~~G~~  265 (349)
T 3pi7_A          231 AEQPRIFLDAVTGPL--ASAIFNAMPK--RARWIIYGRL  265 (349)
T ss_dssp             HHCCCEEEESSCHHH--HHHHHHHSCT--TCEEEECCCS
T ss_pred             CCCCcEEEECCCChh--HHHHHhhhcC--CCEEEEEecc
Confidence            335899999998432  3445555544  3589988754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.38  E-value=0.00023  Score=60.73  Aligned_cols=35  Identities=20%  Similarity=0.259  Sum_probs=28.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEE-EcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIM-TVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l-~R~~  112 (250)
                      +++|.|+    |++|.+|+.+++.+.+ .|++|+++ ++..
T Consensus         5 ~mkV~V~----Ga~G~mG~~~~~~~~~~~~~elva~~d~~~   41 (273)
T 1dih_A            5 NIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREG   41 (273)
T ss_dssp             BEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence            4699999    9999999999999874 57888855 4443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.38  E-value=0.00045  Score=60.74  Aligned_cols=94  Identities=15%  Similarity=0.186  Sum_probs=57.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC---eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|.|.    ||+|++|+.+++.|++++|   +++++......-..+        . +....+.+...|++.    +.+
T Consensus         6 ~~kV~Ii----GAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~--------~-~~g~~i~~~~~~~~~----~~~   68 (340)
T 2hjs_A            6 PLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--------G-FAESSLRVGDVDSFD----FSS   68 (340)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--------E-ETTEEEECEEGGGCC----GGG
T ss_pred             CcEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcc--------c-cCCcceEEecCCHHH----hcC
Confidence            4689999    9999999999999997764   456554321110000        0 111112221112222    344


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                        +|+||.+.|..  ....+++.+.+.|++ +|-+|+..
T Consensus        69 --~DvV~~a~g~~--~s~~~a~~~~~aG~k-vId~Sa~~  102 (340)
T 2hjs_A           69 --VGLAFFAAAAE--VSRAHAERARAAGCS-VIDLSGAL  102 (340)
T ss_dssp             --CSEEEECSCHH--HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred             --CCEEEEcCCcH--HHHHHHHHHHHCCCE-EEEeCCCC
Confidence              79999998843  456778888888874 77777754

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.37  E-value=0.001  Score=57.34  Aligned_cols=105  Identities=19%  Similarity=0.220  Sum_probs=70.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEeC-CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~~-D~~~l~~~  147 (250)
                      .+++|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+....   ...+ +...++.++.. ++..+.++
T Consensus        20 ~m~~I~iI----G-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v   94 (310)
T 3doj_A           20 HMMEVGFL----G-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSV   94 (310)
T ss_dssp             CSCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHH
T ss_pred             cCCEEEEE----C-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHH
Confidence            35799999    5 79999999999999999999999998776654322211   1111 12344444333 45555555


Q ss_pred             h---cC-----CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          148 V---GG-----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       148 l---~~-----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +   ++     ..-.+||++..........+.+.+.+.|+ +|+
T Consensus        95 ~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~v  137 (310)
T 3doj_A           95 VFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG-RFV  137 (310)
T ss_dssp             HHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            4   22     12357889888888888888888877665 444

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.33  E-value=9.9e-05  Score=62.74  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=49.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ..++|+|+    |+ |.+|+.+++.|++.|++|++++|+.++.+.+.+.       +...+ .+...|.+++.+    ..
T Consensus       118 ~~k~vlVi----Ga-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~-------~~~~~-~~~~~~~~~~~~----~~  180 (271)
T 1nyt_A          118 PGLRILLI----GA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKL-------FAHTG-SIQALSMDELEG----HE  180 (271)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH-------TGGGS-SEEECCSGGGTT----CC
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-------hhccC-CeeEecHHHhcc----CC
Confidence            46899999    87 7899999999999999999999987655433211       00000 122334333322    24


Q ss_pred             ccEEEeCCCcC
Q 025587          153 FDVVLDNNGKN  163 (250)
Q Consensus       153 ~d~Vi~~ag~~  163 (250)
                      +|+||++++..
T Consensus       181 ~DivVn~t~~~  191 (271)
T 1nyt_A          181 FDLIINATSSG  191 (271)
T ss_dssp             CSEEEECCSCG
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.31  E-value=0.00034  Score=61.87  Aligned_cols=98  Identities=18%  Similarity=0.274  Sum_probs=66.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ..++|+|+    |+ |.+|+.+++.|...|.+|++++|++++.+.+.        +.....+..+..+.+++.+.+.+  
T Consensus       166 ~~~~VlVi----Ga-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~--  230 (361)
T 1pjc_A          166 KPGKVVIL----GG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE--------TLFGSRVELLYSNSAEIETAVAE--  230 (361)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHHGGGSEEEECCHHHHHHHHHT--
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH--------HhhCceeEeeeCCHHHHHHHHcC--
Confidence            35899999    87 99999999999999999999999876544321        11122333455566777777776  


Q ss_pred             ccEEEeCCCcCHH-----hHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~~~~-----~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +|+||++.+....     .....++.++.  -..++.++.
T Consensus       231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~--g~~ivdv~~  268 (361)
T 1pjc_A          231 ADLLIGAVLVPGRRAPILVPASLVEQMRT--GSVIVDVAV  268 (361)
T ss_dssp             CSEEEECCCCTTSSCCCCBCHHHHTTSCT--TCEEEETTC
T ss_pred             CCEEEECCCcCCCCCCeecCHHHHhhCCC--CCEEEEEec
Confidence            7999999874221     13334444443  246777765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.31  E-value=0.00047  Score=60.34  Aligned_cols=96  Identities=18%  Similarity=0.192  Sum_probs=63.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ...+|||+    ||+|.+|..+++.+...|.+|+++ +++++.+..           ...+...+..+   .+.+.+...
T Consensus       150 ~g~~VlV~----Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-----------~~lGa~~i~~~~~~~~~~~~~~~  213 (343)
T 3gaz_A          150 DGQTVLIQ----GGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-----------RDLGATPIDASREPEDYAAEHTA  213 (343)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-----------HHHTSEEEETTSCHHHHHHHHHT
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-----------HHcCCCEeccCCCHHHHHHHHhc
Confidence            46799999    999999999999999999999998 665443321           11122222222   344555555


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+|+||+++|.  ......++.++..  +++|.++..
T Consensus       214 ~~g~D~vid~~g~--~~~~~~~~~l~~~--G~iv~~g~~  248 (343)
T 3gaz_A          214 GQGFDLVYDTLGG--PVLDASFSAVKRF--GHVVSCLGW  248 (343)
T ss_dssp             TSCEEEEEESSCT--HHHHHHHHHEEEE--EEEEESCCC
T ss_pred             CCCceEEEECCCc--HHHHHHHHHHhcC--CeEEEEccc
Confidence            5569999999994  3444455555443  578877654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.29  E-value=0.00043  Score=60.41  Aligned_cols=100  Identities=15%  Similarity=0.128  Sum_probs=65.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ..+++|||+    ||+|.+|...++.+...|++|+++++++++.+.+.+         ...+..+...+   .+.+.+..
T Consensus       143 ~~g~~VlV~----Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---------lga~~~~~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          143 QRNDVLLVN----ACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR---------LGAAYVIDTSTAPLYETVMELT  209 (340)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH---------HTCSEEEETTTSCHHHHHHHHT
T ss_pred             CCCCEEEEe----CCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---------CCCcEEEeCCcccHHHHHHHHh
Confidence            346899999    999999999999998899999999998866543211         11111122222   34455555


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+..+|+||+++|...  ....++.++.  -+++|.++..
T Consensus       210 ~~~g~Dvvid~~g~~~--~~~~~~~l~~--~G~iv~~G~~  245 (340)
T 3gms_A          210 NGIGADAAIDSIGGPD--GNELAFSLRP--NGHFLTIGLL  245 (340)
T ss_dssp             TTSCEEEEEESSCHHH--HHHHHHTEEE--EEEEEECCCT
T ss_pred             CCCCCcEEEECCCChh--HHHHHHHhcC--CCEEEEEeec
Confidence            5556999999998432  2333443333  2578887754

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.28  E-value=0.00059  Score=60.25  Aligned_cols=104  Identities=17%  Similarity=0.154  Sum_probs=60.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCcc-ccCCCCCCCccc--c--hhcCCceEEeCCHHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENS-DKMKKPPFNRFN--E--IVSAGGKTVWGDPAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~-~~~~~~~~~~~~--~--~~~~~v~~v~~D~~~l~~  146 (250)
                      |+++|.|.    ||+|++|+.+++.|++.+ .+|+++.+++... +.+.. .+..+.  .  ....++.+...|+++   
T Consensus         7 M~~kV~Ii----GAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (354)
T 1ys4_A            7 MKIKVGVL----GATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKD-ACYWFQDRDIPENIKDMVVIPTDPKH---   78 (354)
T ss_dssp             CCEEEEEE----TTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHH-HSCCCCSSCCCHHHHTCBCEESCTTS---
T ss_pred             ccceEEEE----CcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHH-hcccccccccccCceeeEEEeCCHHH---
Confidence            45799999    999999999999998875 6888887543211 11100 000000  0  001122222224333   


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +++ .++|+||.+.+..  ....+++.+.+.|. ++|-.|+.
T Consensus        79 ~~~-~~~DvV~~atp~~--~~~~~a~~~~~aG~-~VId~s~~  116 (354)
T 1ys4_A           79 EEF-EDVDIVFSALPSD--LAKKFEPEFAKEGK-LIFSNASA  116 (354)
T ss_dssp             GGG-TTCCEEEECCCHH--HHHHHHHHHHHTTC-EEEECCST
T ss_pred             Hhc-CCCCEEEECCCch--HHHHHHHHHHHCCC-EEEECCch
Confidence            223 1379999998743  45566777777776 46766654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.28  E-value=0.00038  Score=60.94  Aligned_cols=97  Identities=20%  Similarity=0.197  Sum_probs=64.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~  146 (250)
                      ...+|||+    |+ |.+|..+++.+...|+ +|+++++++++.+..           ...+.. ++..+    .+.+.+
T Consensus       167 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-----------~~~Ga~~~~~~~~~~~~~~v~~  230 (348)
T 2d8a_A          167 SGKSVLIT----GA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-----------KKVGADYVINPFEEDVVKEVMD  230 (348)
T ss_dssp             TTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-----------HHHTCSEEECTTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHhCCCEEECCCCcCHHHHHHH
Confidence            56799999    99 9999999999999999 999999886544321           111222 22221    233444


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +..+..+|+||+++|. .......++.++..  +++|.++..
T Consensus       231 ~~~g~g~D~vid~~g~-~~~~~~~~~~l~~~--G~iv~~g~~  269 (348)
T 2d8a_A          231 ITDGNGVDVFLEFSGA-PKALEQGLQAVTPA--GRVSLLGLY  269 (348)
T ss_dssp             HTTTSCEEEEEECSCC-HHHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HcCCCCCCEEEECCCC-HHHHHHHHHHHhcC--CEEEEEccC
Confidence            4444469999999984 23344555555543  488888764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.28  E-value=0.00044  Score=60.46  Aligned_cols=98  Identities=21%  Similarity=0.257  Sum_probs=63.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D---~~~l~~~  147 (250)
                      ..+++|||+    ||+|.||...++.+...|++|+++++++++.+...+           .+.. ++..+   .+.+.+.
T Consensus       158 ~~g~~VlV~----Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-----------~ga~~v~~~~~~~~~~v~~~  222 (342)
T 4eye_A          158 RAGETVLVL----GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-----------VGADIVLPLEEGWAKAVREA  222 (342)
T ss_dssp             CTTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----------HTCSEEEESSTTHHHHHHHH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----------cCCcEEecCchhHHHHHHHH
Confidence            346799999    999999999999999999999999998765442211           1222 22222   3445555


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..+..+|+||+++|..  .....++.++.  -++++.++..
T Consensus       223 ~~~~g~Dvvid~~g~~--~~~~~~~~l~~--~G~iv~~G~~  259 (342)
T 4eye_A          223 TGGAGVDMVVDPIGGP--AFDDAVRTLAS--EGRLLVVGFA  259 (342)
T ss_dssp             TTTSCEEEEEESCC----CHHHHHHTEEE--EEEEEEC---
T ss_pred             hCCCCceEEEECCchh--HHHHHHHhhcC--CCEEEEEEcc
Confidence            5555699999999953  34444444444  2478887653

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.27  E-value=0.00031  Score=63.67  Aligned_cols=99  Identities=14%  Similarity=0.117  Sum_probs=64.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-----------
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-----------  140 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-----------  140 (250)
                      ..+++|||+    ||+|.||...++.+...|.+|+++++++++.+.+.+.         ..+..+...|           
T Consensus       219 ~~g~~VlV~----GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~l---------Ga~~~i~~~~~~~~~~~~~~~  285 (447)
T 4a0s_A          219 KQGDIVLIW----GASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL---------GCDLVINRAELGITDDIADDP  285 (447)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---------TCCCEEEHHHHTCCTTGGGCH
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc---------CCCEEEecccccccccccccc
Confidence            356899999    9999999999999999999999999876554432111         1111111111           


Q ss_pred             ----------HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          141 ----------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       141 ----------~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                                .+.+.+.. +..+|+||+++|.  ......++.++.  -+++|.+++.
T Consensus       286 ~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~--~~~~~~~~~l~~--~G~iv~~G~~  338 (447)
T 4a0s_A          286 RRVVETGRKLAKLVVEKA-GREPDIVFEHTGR--VTFGLSVIVARR--GGTVVTCGSS  338 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHH-SSCCSEEEECSCH--HHHHHHHHHSCT--TCEEEESCCT
T ss_pred             cccchhhhHHHHHHHHHh-CCCceEEEECCCc--hHHHHHHHHHhc--CCEEEEEecC
Confidence                      23344444 4469999999995  234444554444  3588888764

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.26  E-value=0.0014  Score=57.66  Aligned_cols=97  Identities=15%  Similarity=0.091  Sum_probs=60.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +++|.|.    ||+|++|+.+++.|.+.+ .+++.+.+..+.-..+.. .+..+...  .++.  ..+.+   + +.+  
T Consensus         4 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~-~~~~~~g~--~~~~--~~~~~---~-~~~--   68 (345)
T 2ozp_A            4 KKTLSIV----GASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHF-VHPNLRGR--TNLK--FVPPE---K-LEP--   68 (345)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGG-TCGGGTTT--CCCB--CBCGG---G-CCC--
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHH-hCchhcCc--cccc--ccchh---H-hcC--
Confidence            4789999    999999999999999876 488887764322211110 00111100  1111  11332   2 343  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|+|+.+.+...  ...+++.+.+.|+ ++|-+|+.
T Consensus        69 vDvV~~a~g~~~--s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           69 ADILVLALPHGV--FAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             CSEEEECCCTTH--HHHTHHHHHTTCS-EEEECSST
T ss_pred             CCEEEEcCCcHH--HHHHHHHHHHCCC-EEEEcCcc
Confidence            899999998653  5666777777786 68888874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.25  E-value=0.0017  Score=55.27  Aligned_cols=103  Identities=22%  Similarity=0.228  Sum_probs=68.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCc---ccch-hcCCceEEeC-CHHHHHhhh-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEI-VSAGGKTVWG-DPAEVGNVV-  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~---~~~~-~~~~v~~v~~-D~~~l~~~l-  148 (250)
                      |+|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+.....   +.+. ...++-++.. ++..+.+++ 
T Consensus         2 ~~i~iI----G-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~   76 (287)
T 3pef_A            2 QKFGFI----G-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCF   76 (287)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CEEEEE----e-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHc
Confidence            689999    5 799999999999999999999999987765543322211   1111 2234433322 344555554 


Q ss_pred             --cC-----CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 --GG-----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 --~~-----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                        ++     .+-.+||++.+........+.+.+.+.|+ +|+
T Consensus        77 ~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~-~~~  117 (287)
T 3pef_A           77 GKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG-RFL  117 (287)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             CcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC-EEE
Confidence              21     12357888888888888888888877665 444

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.24  E-value=0.00084  Score=58.12  Aligned_cols=100  Identities=15%  Similarity=0.183  Sum_probs=64.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccch---hcCCceEEe-CCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEI---VSAGGKTVW-GDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~---~~~~v~~v~-~D~~~l~~~  147 (250)
                      |+++|.|+    |+ |.+|..++..|+..|+ +|++++++++..+....    .+.+.   .....++.. .|.    +.
T Consensus         1 M~~kI~VI----Ga-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~----dl~~~~~~~~~~~~i~~t~d~----~a   67 (309)
T 1ur5_A            1 MRKKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKAL----DLYEASPIEGFDVRVTGTNNY----AD   67 (309)
T ss_dssp             -CCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHH----HHHTTHHHHTCCCCEEEESCG----GG
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHH----hHHHhHhhcCCCeEEEECCCH----HH
Confidence            34799999    87 9999999999999997 99999988765442110    01110   111223322 443    34


Q ss_pred             hcCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +++  .|+||.++|.              |....+.+.+.+.+.....+|.+.|
T Consensus        68 ~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           68 TAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             GTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             HCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            566  6999999873              3455667777777766555655554

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.23  E-value=0.0021  Score=48.89  Aligned_cols=87  Identities=26%  Similarity=0.304  Sum_probs=58.6

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      ..++|.|+    |++   |.+|..+++.|++.||+|+.+++..+...                ++. ...+.++   +.+
T Consensus        13 ~p~~IavI----GaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i~----------------G~~-~~~s~~e---l~~   68 (138)
T 1y81_A           13 EFRKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE----------------GLK-CYRSVRE---LPK   68 (138)
T ss_dssp             -CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEE-CBSSGGG---SCT
T ss_pred             CCCeEEEE----eecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeEC----------------Cee-ecCCHHH---hCC
Confidence            35789999    876   89999999999999999877766542211                222 1112332   222


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .  +|+++-+..  ......+++.+.+.|++.++..++
T Consensus        69 ~--vDlvii~vp--~~~v~~v~~~~~~~g~~~i~~~~~  102 (138)
T 1y81_A           69 D--VDVIVFVVP--PKVGLQVAKEAVEAGFKKLWFQPG  102 (138)
T ss_dssp             T--CCEEEECSC--HHHHHHHHHHHHHTTCCEEEECTT
T ss_pred             C--CCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEcCc
Confidence            2  788887765  466777777777788887766553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.22  E-value=0.00052  Score=62.76  Aligned_cols=94  Identities=16%  Similarity=0.220  Sum_probs=63.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      .|+|+|.    | .|.+|+++++.|.++||+|++++++++..+.+.          ...++.++.||   ++.|.++= -
T Consensus         3 ~M~iiI~----G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~----------~~~~~~~i~Gd~~~~~~L~~Ag-i   66 (461)
T 4g65_A            3 AMKIIIL----G-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQ----------DKYDLRVVNGHASHPDVLHEAG-A   66 (461)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH----------HHSSCEEEESCTTCHHHHHHHT-T
T ss_pred             cCEEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----------HhcCcEEEEEcCCCHHHHHhcC-C
Confidence            5799999    5 699999999999999999999999886654321          12367889998   66666652 2


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLF  184 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~  184 (250)
                      .+.|.+|-+.+.+- ....+...|++ .+.++.|-
T Consensus        67 ~~ad~~ia~t~~De-~Nl~~~~~Ak~~~~~~~~ia  100 (461)
T 4g65_A           67 QDADMLVAVTNTDE-TNMAACQVAFTLFNTPNRIA  100 (461)
T ss_dssp             TTCSEEEECCSCHH-HHHHHHHHHHHHHCCSSEEE
T ss_pred             CcCCEEEEEcCChH-HHHHHHHHHHHhcCCcccee
Confidence            34799997766331 12222334444 35555443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.20  E-value=0.00036  Score=57.09  Aligned_cols=40  Identities=30%  Similarity=0.399  Sum_probs=33.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ++++|.|+    | +|.+|..+++.|.+.|++|++++|+.+..+.
T Consensus        27 ~~~~I~ii----G-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           27 EAPKVGIL----G-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             --CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CCCEEEEE----c-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            35789999    7 8999999999999999999999998765443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.19  E-value=0.00045  Score=62.89  Aligned_cols=98  Identities=17%  Similarity=0.322  Sum_probs=65.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce--EEeC----------
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWG----------  139 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~----------  139 (250)
                      ..+.+|||+    ||+|.+|...++.+...|.+|+++++++++.+.+++           .+..  +...          
T Consensus       227 ~~g~~VlV~----GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~-----------lGa~~vi~~~~~d~~~~~~~  291 (456)
T 3krt_A          227 KQGDNVLIW----GASGGLGSYATQFALAGGANPICVVSSPQKAEICRA-----------MGAEAIIDRNAEGYRFWKDE  291 (456)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-----------HTCCEEEETTTTTCCSEEET
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh-----------hCCcEEEecCcCcccccccc
Confidence            346799999    999999999999999999999999987655443211           1211  1111          


Q ss_pred             ---CH-------HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          140 ---DP-------AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       140 ---D~-------~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                         |.       +.+.++..+..+|+||++.|.  ......++.++..  +++|.++..
T Consensus       292 ~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~--~~~~~~~~~l~~~--G~iv~~G~~  346 (456)
T 3krt_A          292 NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR--ETFGASVFVTRKG--GTITTCAST  346 (456)
T ss_dssp             TEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH--HHHHHHHHHEEEE--EEEEESCCT
T ss_pred             cccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc--hhHHHHHHHhhCC--cEEEEEecC
Confidence               11       445555555579999999985  4444555555443  478877653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.16  E-value=0.0012  Score=56.60  Aligned_cols=104  Identities=15%  Similarity=0.115  Sum_probs=66.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccchhcCCceEEeC-CHHHHHhh--
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIVSAGGKTVWG-DPAEVGNV--  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~~~~~~v~~v~~-D~~~l~~~--  147 (250)
                      +++|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+....   .+.+....++-++.. +...+.++  
T Consensus        15 ~~~I~vI----G-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~   89 (296)
T 3qha_A           15 QLKLGYI----G-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVG   89 (296)
T ss_dssp             CCCEEEE----C-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHH
T ss_pred             CCeEEEE----C-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHH
Confidence            4689999    5 79999999999999999999999998776654322211   112222233332222 33333332  


Q ss_pred             --hcCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          148 --VGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       148 --l~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                        .... +-.+||++.......+..+.+.+.+.++ +|+
T Consensus        90 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~-~~~  127 (296)
T 3qha_A           90 ELAGHAKPGTVIAIHSTISDTTAVELARDLKARDI-HIV  127 (296)
T ss_dssp             HHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTC-EEE
T ss_pred             HHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCC-EEE
Confidence              2211 2357888888777777788877777665 444

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.14  E-value=0.0037  Score=52.35  Aligned_cols=100  Identities=10%  Similarity=0.138  Sum_probs=64.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh---cC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV---GG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l---~~  150 (250)
                      ++|.|+    |++|.+|+.+++.+.+. |++|+++....+..+.+.         ....++-++...++...+.+   ..
T Consensus         1 mkV~V~----Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~---------~~~~DvvIDfT~p~a~~~~~~~a~~   67 (245)
T 1p9l_A            1 MRVGVL----GAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT---------DGNTEVVIDFTHPDVVMGNLEFLID   67 (245)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH---------HTTCCEEEECSCTTTHHHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh---------ccCCcEEEEccChHHHHHHHHHHHH
Confidence            489999    99999999999999866 899887665432222110         01234555555544444333   12


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEEEcCc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFISSA  188 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~iSS~  188 (250)
                      ..+++|+-..|.+.+....+.+++++. ++ .+++.+..
T Consensus        68 ~g~~~VigTTG~~~e~~~~l~~aa~~~~~~-~vv~a~N~  105 (245)
T 1p9l_A           68 NGIHAVVGTTGFTAERFQQVESWLVAKPNT-SVLIAPNF  105 (245)
T ss_dssp             TTCEEEECCCCCCHHHHHHHHHHHHTSTTC-EEEECSCC
T ss_pred             cCCCEEEcCCCCCHHHHHHHHHHHHhCCCC-CEEEECCc
Confidence            247899988888777666677777765 44 56665553

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.13  E-value=0.0024  Score=55.32  Aligned_cols=105  Identities=16%  Similarity=0.132  Sum_probs=68.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCc---ccch-hcCCceEEeC-CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNEI-VSAGGKTVWG-DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~---~~~~-~~~~v~~v~~-D~~~l~~~  147 (250)
                      ++++|.|+    | .|.+|..+++.|++.||+|++.+|++++.+.+.+.....   +.+. ...++.++.. +...+..+
T Consensus        30 ~~~~I~iI----G-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v  104 (320)
T 4dll_A           30 YARKITFL----G-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDV  104 (320)
T ss_dssp             CCSEEEEE----C-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHH
T ss_pred             CCCEEEEE----C-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHH
Confidence            45799999    4 799999999999999999999999887665543332211   1111 2233332222 34444444


Q ss_pred             hc--C-----CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          148 VG--G-----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       148 l~--~-----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +.  +     .+-.+||++.......+..+.+.+++.|+ +|+
T Consensus       105 ~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~-~~~  146 (320)
T 4dll_A          105 LFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGI-AHL  146 (320)
T ss_dssp             HTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC-EEE
Confidence            43  1     12367888888777778888887777665 444

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.10  E-value=0.0019  Score=56.55  Aligned_cols=94  Identities=14%  Similarity=0.072  Sum_probs=59.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|.|.    ||+|++|+.+++.|++++   .+|+++....+.-..+        . +....+.+...|++    .+.+
T Consensus         3 ~~kV~I~----GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~--------~-~~~~~i~~~~~~~~----~~~~   65 (336)
T 2r00_A            3 QFNVAIF----GATGAVGETMLEVLQEREFPVDELFLLASERSEGKTY--------R-FNGKTVRVQNVEEF----DWSQ   65 (336)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEE--------E-ETTEEEEEEEGGGC----CGGG
T ss_pred             ccEEEEE----CCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCce--------e-ecCceeEEecCChH----HhcC
Confidence            5789999    999999999999999873   5677776322110110        0 11112223222332    2333


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                        +|+||.+.|..  .....++.+.+.|+ ++|-+|+..
T Consensus        66 --vDvVf~a~g~~--~s~~~a~~~~~~G~-~vId~s~~~   99 (336)
T 2r00_A           66 --VHIALFSAGGE--LSAKWAPIAAEAGV-VVIDNTSHF   99 (336)
T ss_dssp             --CSEEEECSCHH--HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --CCEEEECCCch--HHHHHHHHHHHcCC-EEEEcCCcc
Confidence              79999998844  46667777778887 677778753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.09  E-value=0.00019  Score=61.57  Aligned_cols=77  Identities=17%  Similarity=0.247  Sum_probs=51.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..++|+|+    |+ |.+|+.++..|.+.|. +|++++|+.++.+.+.+.    +.. ...++.+...+.+++.+.+.+ 
T Consensus       126 ~~k~vlVl----Ga-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~----~~~-~~~~~~i~~~~~~~l~~~l~~-  194 (283)
T 3jyo_A          126 KLDSVVQV----GA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADV----INN-AVGREAVVGVDARGIEDVIAA-  194 (283)
T ss_dssp             CCSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH----HHH-HHTSCCEEEECSTTHHHHHHH-
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH----HHh-hcCCceEEEcCHHHHHHHHhc-
Confidence            46899999    86 8999999999999998 799999987655433211    000 011223333344556666655 


Q ss_pred             cccEEEeCCC
Q 025587          152 TFDVVLDNNG  161 (250)
Q Consensus       152 ~~d~Vi~~ag  161 (250)
                       .|+||++..
T Consensus       195 -~DiVInaTp  203 (283)
T 3jyo_A          195 -ADGVVNATP  203 (283)
T ss_dssp             -SSEEEECSS
T ss_pred             -CCEEEECCC
Confidence             588888865

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.08  E-value=0.0027  Score=56.28  Aligned_cols=95  Identities=17%  Similarity=0.153  Sum_probs=58.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC---eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      |+++|.|+    ||||++|..|++.|.+++|   ++..++-....-..+        . +...++.+...|.++    +.
T Consensus         1 m~~kVaIv----GATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~--------~-~~~~~~~~~~~~~~~----~~   63 (366)
T 3pwk_A            1 MGYTVAVV----GATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--------K-FKDQDITIEETTETA----FE   63 (366)
T ss_dssp             -CEEEEEE----TTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEE--------E-ETTEEEEEEECCTTT----TT
T ss_pred             CCcEEEEE----CCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcc--------e-ecCCCceEeeCCHHH----hc
Confidence            46799999    9999999999999988765   344444322111111        0 111123333334332    34


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +  +|+||.+.+.  ...+..+..+.+.|. ++|-+|+..
T Consensus        64 ~--~Dvvf~a~~~--~~s~~~a~~~~~~G~-~vIDlSa~~   98 (366)
T 3pwk_A           64 G--VDIALFSAGS--STSAKYAPYAVKAGV-VVVDNTSYF   98 (366)
T ss_dssp             T--CSEEEECSCH--HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             C--CCEEEECCCh--HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence            4  7999999873  345666777777787 678788753

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.08  E-value=0.00084  Score=57.31  Aligned_cols=68  Identities=15%  Similarity=0.158  Sum_probs=49.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..++|+|+    |+ |.+|+.++..|.+.|+ +|++++|+.++.+.+...            +..  ...+++.+++.+ 
T Consensus       116 ~~k~vlvl----Ga-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~------------~~~--~~~~~~~~~~~~-  175 (277)
T 3don_A          116 EDAYILIL----GA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN------------INK--INLSHAESHLDE-  175 (277)
T ss_dssp             GGCCEEEE----CC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC------------CEE--ECHHHHHHTGGG-
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh------------ccc--ccHhhHHHHhcC-
Confidence            46799999    75 8999999999999998 899999998776654321            111  134455555555 


Q ss_pred             cccEEEeCCC
Q 025587          152 TFDVVLDNNG  161 (250)
Q Consensus       152 ~~d~Vi~~ag  161 (250)
                       .|+||++..
T Consensus       176 -aDiVInaTp  184 (277)
T 3don_A          176 -FDIIINTTP  184 (277)
T ss_dssp             -CSEEEECCC
T ss_pred             -CCEEEECcc
Confidence             588887754

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.07  E-value=0.0022  Score=55.03  Aligned_cols=105  Identities=15%  Similarity=0.127  Sum_probs=67.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC----cccch-hcCCceEEeC-CHHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN----RFNEI-VSAGGKTVWG-DPAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~----~~~~~-~~~~v~~v~~-D~~~l~~  146 (250)
                      ++++|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+....    .+.+. ...++-++.. +...+..
T Consensus         6 ~~~~I~iI----G-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~   80 (303)
T 3g0o_A            6 TDFHVGIV----G-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQ   80 (303)
T ss_dssp             -CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHH
T ss_pred             CCCeEEEE----C-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHH
Confidence            45799999    5 79999999999999999999999987655443222111    11121 2233333322 3445555


Q ss_pred             hh---cC----C-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          147 VV---GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       147 ~l---~~----~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      ++   ++    . +-.+||++..........+.+.+.+.|+ +|+
T Consensus        81 v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~-~~~  124 (303)
T 3g0o_A           81 VLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL-NML  124 (303)
T ss_dssp             HHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            54   22    1 2357888888888778888888877665 444

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.05  E-value=0.0014  Score=57.90  Aligned_cols=104  Identities=14%  Similarity=0.242  Sum_probs=66.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccchh-cC---CceEEeCCHHHHHh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEIV-SA---GGKTVWGDPAEVGN  146 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~~~-~~---~v~~v~~D~~~l~~  146 (250)
                      +|+|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+....   .+.++. ..   ++.++..-...+.+
T Consensus        22 ~mkIgiI----G-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~   96 (358)
T 4e21_A           22 SMQIGMI----G-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDS   96 (358)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHH
T ss_pred             CCEEEEE----C-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHH
Confidence            4799999    5 89999999999999999999999987665544332221   112221 22   33333222112332


Q ss_pred             hh----cCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          147 VV----GGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       147 ~l----~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      ++    ... .-++||++.......+..+.+.+++.|+ +|+
T Consensus        97 vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~-~~v  137 (358)
T 4e21_A           97 MLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGI-TYV  137 (358)
T ss_dssp             HHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             HHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCC-EEE
Confidence            22    211 2368888888888888888888887766 454

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.05  E-value=0.00079  Score=59.55  Aligned_cols=99  Identities=18%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D~~~l~~~l~  149 (250)
                      ..+.+|||+    ||+|.+|..+++.+...|.+|+++++ +++.+..           ...+.. ++. .+.+..+++.+
T Consensus       182 ~~g~~VlV~----Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-----------~~lGa~~v~~~~~~~~~~~~~~  245 (375)
T 2vn8_A          182 CTGKRVLIL----GASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-----------RKLGADDVIDYKSGSVEEQLKS  245 (375)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-----------HHTTCSEEEETTSSCHHHHHHT
T ss_pred             CCCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-----------HHcCCCEEEECCchHHHHHHhh
Confidence            346799999    99999999999999999999998874 3332211           111222 222 22222222222


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ...+|+||+++|.........++.++.  -+++|.++..
T Consensus       246 ~~g~D~vid~~g~~~~~~~~~~~~l~~--~G~iv~~g~~  282 (375)
T 2vn8_A          246 LKPFDFILDNVGGSTETWAPDFLKKWS--GATYVTLVTP  282 (375)
T ss_dssp             SCCBSEEEESSCTTHHHHGGGGBCSSS--CCEEEESCCS
T ss_pred             cCCCCEEEECCCChhhhhHHHHHhhcC--CcEEEEeCCC
Confidence            235899999999653222222333322  3588887754

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.05  E-value=0.00047  Score=58.69  Aligned_cols=40  Identities=23%  Similarity=0.436  Sum_probs=35.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      |+++|.|+    |++|.+|..+++.|++.|++|++++|+++..+
T Consensus        10 mmm~I~iI----G~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~   49 (286)
T 3c24_A           10 GPKTVAIL----GAGGKMGARITRKIHDSAHHLAAIEIAPEGRD   49 (286)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHHSSSEEEEECCSHHHHH
T ss_pred             cCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            35799999    88899999999999999999999999875544

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.03  E-value=0.00073  Score=59.54  Aligned_cols=97  Identities=14%  Similarity=0.184  Sum_probs=65.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC----HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD----PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D----~~~l~~~  147 (250)
                      .+.+|||+    | +|.+|...++.+...|.+|+++++++++.+..           ...+.. ++..+    .+.+.+.
T Consensus       189 ~g~~VlV~----G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~v~~~  252 (363)
T 3uog_A          189 AGDRVVVQ----G-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-----------FALGADHGINRLEEDWVERVYAL  252 (363)
T ss_dssp             TTCEEEEE----S-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------HHHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-----------HHcCCCEEEcCCcccHHHHHHHH
Confidence            46799999    8 89999999999999999999999887554422           111222 22222    3455555


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ..+..+|+||+++|.  ......++.++..  ++++.++...
T Consensus       253 ~~g~g~D~vid~~g~--~~~~~~~~~l~~~--G~iv~~G~~~  290 (363)
T 3uog_A          253 TGDRGADHILEIAGG--AGLGQSLKAVAPD--GRISVIGVLE  290 (363)
T ss_dssp             HTTCCEEEEEEETTS--SCHHHHHHHEEEE--EEEEEECCCS
T ss_pred             hCCCCceEEEECCCh--HHHHHHHHHhhcC--CEEEEEecCC
Confidence            555569999999993  3344555555543  4788887643

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.00054  Score=59.35  Aligned_cols=94  Identities=18%  Similarity=0.152  Sum_probs=58.6

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce--EEeCCH-HHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGDP-AEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~D~-~~l~~~l~~~~  152 (250)
                      +|||+    ||+|.+|...++.+...|.+|+++++++++.+.+++           .+..  +...|. ++..+.+.+..
T Consensus       152 ~VlV~----Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-----------lGa~~~i~~~~~~~~~~~~~~~~~  216 (328)
T 1xa0_A          152 PVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-----------LGAKEVLAREDVMAERIRPLDKQR  216 (328)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-----------TTCSEEEECC---------CCSCC
T ss_pred             eEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------cCCcEEEecCCcHHHHHHHhcCCc
Confidence            79999    999999999999999999999999998765543211           1222  112222 11112223335


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|+||++.|..  .....++.++.  -++++.++..
T Consensus       217 ~d~vid~~g~~--~~~~~~~~l~~--~G~~v~~G~~  248 (328)
T 1xa0_A          217 WAAAVDPVGGR--TLATVLSRMRY--GGAVAVSGLT  248 (328)
T ss_dssp             EEEEEECSTTT--THHHHHHTEEE--EEEEEECSCC
T ss_pred             ccEEEECCcHH--HHHHHHHhhcc--CCEEEEEeec
Confidence            99999999853  33444444443  2478877653

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.02  E-value=0.00049  Score=59.84  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=50.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcC---CCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVG---DENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~---~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~  147 (250)
                      ..+++||+    |+ |.+|++++..|.+.|. +|+++.|+   .++.+.+.+.    +.......+..+. .|.+++.+.
T Consensus       153 ~gk~~lVl----Ga-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~----~~~~~~~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          153 IGKKMTIC----GA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEK----INSKTDCKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             TTSEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHH----HHHHSSCEEEEEETTCHHHHHHH
T ss_pred             cCCEEEEE----CC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHH----hhhhcCCceEEeccchHHHHHhh
Confidence            46899999    86 8999999999999998 89999998   4333322110    0000111123332 235667777


Q ss_pred             hcCCcccEEEeCCC
Q 025587          148 VGGVTFDVVLDNNG  161 (250)
Q Consensus       148 l~~~~~d~Vi~~ag  161 (250)
                      +.+  .|+||++..
T Consensus       224 l~~--aDiIINaTp  235 (315)
T 3tnl_A          224 IAE--SVIFTNATG  235 (315)
T ss_dssp             HHT--CSEEEECSS
T ss_pred             hcC--CCEEEECcc
Confidence            766  688988865

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.02  E-value=0.0024  Score=57.02  Aligned_cols=99  Identities=15%  Similarity=0.184  Sum_probs=65.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC---C-HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---D-PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~---D-~~~l~  145 (250)
                      ..+.+|||+    |+ |.+|...++.+...|. +|+++++++++.+..           ...+.. ++..   | .+.+.
T Consensus       212 ~~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~~i~  275 (404)
T 3ip1_A          212 RPGDNVVIL----GG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-----------KELGADHVIDPTKENFVEAVL  275 (404)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-----------HHHTCSEEECTTTSCHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHcCCCEEEcCCCCCHHHHHH
Confidence            346799999    97 9999999999989998 899988877544321           111222 2222   2 44555


Q ss_pred             hhhcCCcccEEEeCCCcCHHhHHHHHHHH----HhCCCCEEEEEcCc
Q 025587          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWA----KSSGVKQFLFISSA  188 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~----~~~~~~~~v~iSS~  188 (250)
                      ++..+..+|+||++.|........+++++    +.  -++++.++..
T Consensus       276 ~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~--~G~iv~~G~~  320 (404)
T 3ip1_A          276 DYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGI--NATVAIVARA  320 (404)
T ss_dssp             HHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCC--CCEEEECSCC
T ss_pred             HHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCC--CcEEEEeCCC
Confidence            55555569999999996533344445555    33  3588887653

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.00  E-value=0.0011  Score=57.76  Aligned_cols=95  Identities=21%  Similarity=0.177  Sum_probs=62.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---C-HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D-~~~l~~~  147 (250)
                      ...+|||+    |+ |.+|..+++.+...|+ +|+++++++++.+...+.          .+ .++..   | .+.+.++
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l----------a~-~v~~~~~~~~~~~~~~~  227 (343)
T 2dq4_A          164 SGKSVLIT----GA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY----------AD-RLVNPLEEDLLEVVRRV  227 (343)
T ss_dssp             TTSCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT----------CS-EEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----------HH-hccCcCccCHHHHHHHh
Confidence            56799999    99 9999999999999998 999999887554432211          01 11211   2 2334433


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      - +..+|+||++.|. .......++.++..  +++|.++.
T Consensus       228 ~-~~g~D~vid~~g~-~~~~~~~~~~l~~~--G~iv~~g~  263 (343)
T 2dq4_A          228 T-GSGVEVLLEFSGN-EAAIHQGLMALIPG--GEARILGI  263 (343)
T ss_dssp             H-SSCEEEEEECSCC-HHHHHHHHHHEEEE--EEEEECCC
T ss_pred             c-CCCCCEEEECCCC-HHHHHHHHHHHhcC--CEEEEEec
Confidence            3 4459999999984 23344555655543  47888775

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.98  E-value=0.00097  Score=59.35  Aligned_cols=99  Identities=16%  Similarity=0.195  Sum_probs=66.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+++|+|+    |+ |.||..+++.+...|.+|++++|+++..+.+.        +.....+..+..+.+++.+.+.+ 
T Consensus       166 l~g~~V~Vi----G~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~--------~~~g~~~~~~~~~~~~l~~~l~~-  231 (377)
T 2vhw_A          166 VEPADVVVI----GA-GTAGYNAARIANGMGATVTVLDINIDKLRQLD--------AEFCGRIHTRYSSAYELEGAVKR-  231 (377)
T ss_dssp             BCCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH--------HHTTTSSEEEECCHHHHHHHHHH-
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH--------HhcCCeeEeccCCHHHHHHHHcC-
Confidence            356899999    87 99999999999999999999999875543211        11122233444466777777775 


Q ss_pred             cccEEEeCCCcCHH-----hHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLD-----AVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~-----~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .|+||++++....     .....++.++.  -..+|.++.
T Consensus       232 -aDvVi~~~~~p~~~t~~li~~~~l~~mk~--g~~iV~va~  269 (377)
T 2vhw_A          232 -ADLVIGAVLVPGAKAPKLVSNSLVAHMKP--GAVLVDIAI  269 (377)
T ss_dssp             -CSEEEECCCCTTSCCCCCBCHHHHTTSCT--TCEEEEGGG
T ss_pred             -CCEEEECCCcCCCCCcceecHHHHhcCCC--CcEEEEEec
Confidence             7999998863221     13344555543  247888884

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.96  E-value=0.0011  Score=58.03  Aligned_cols=96  Identities=17%  Similarity=0.134  Sum_probs=62.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE-EeC--C-HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWG--D-PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~--D-~~~l~~~l  148 (250)
                      ...+|||+    ||+|.+|...++.+...|.+|+++++++++.+.+.           ..+... +..  | .+.+.+. 
T Consensus       150 ~g~~VlV~----gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~-  213 (346)
T 3fbg_A          150 EGKTLLII----NGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-----------KMGADIVLNHKESLLNQFKTQ-  213 (346)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-----------HHTCSEEECTTSCHHHHHHHH-
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------hcCCcEEEECCccHHHHHHHh-
Confidence            56899999    99999999999999999999999998775544221           112221 111  2 3444444 


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+..+|+||+++|.. ......++.++..  +++|.++.
T Consensus       214 ~~~g~Dvv~d~~g~~-~~~~~~~~~l~~~--G~iv~~~~  249 (346)
T 3fbg_A          214 GIELVDYVFCTFNTD-MYYDDMIQLVKPR--GHIATIVA  249 (346)
T ss_dssp             TCCCEEEEEESSCHH-HHHHHHHHHEEEE--EEEEESSC
T ss_pred             CCCCccEEEECCCch-HHHHHHHHHhccC--CEEEEECC
Confidence            444699999999832 1223444555443  47776653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.96  E-value=0.0016  Score=56.68  Aligned_cols=95  Identities=17%  Similarity=0.155  Sum_probs=62.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-C--C-HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-G--D-PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~--D-~~~l~~~  147 (250)
                      ..++|||+    |+ |.+|..+++.+...|++|++++|++++.+...           ..+.. ++. .  | .+.+.+.
T Consensus       164 ~g~~VlV~----Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-----------~lGa~~~~d~~~~~~~~~~~~~  227 (339)
T 1rjw_A          164 PGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-----------ELGADLVVNPLKEDAAKFMKEK  227 (339)
T ss_dssp             TTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTCSEEECTTTSCHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-----------HCCCCEEecCCCccHHHHHHHH
Confidence            46799999    99 77999999999999999999998875544221           11222 111 1  2 2334443


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..  .+|+||+++|. .......++.++..  +++|.++..
T Consensus       228 ~~--~~d~vid~~g~-~~~~~~~~~~l~~~--G~~v~~g~~  263 (339)
T 1rjw_A          228 VG--GVHAAVVTAVS-KPAFQSAYNSIRRG--GACVLVGLP  263 (339)
T ss_dssp             HS--SEEEEEESSCC-HHHHHHHHHHEEEE--EEEEECCCC
T ss_pred             hC--CCCEEEECCCC-HHHHHHHHHHhhcC--CEEEEeccc
Confidence            32  48999999984 22344555555543  478887753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.95  E-value=0.0016  Score=56.18  Aligned_cols=106  Identities=15%  Similarity=0.220  Sum_probs=68.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCC---Ccccch-hcCCceEEeC-CHHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF---NRFNEI-VSAGGKTVWG-DPAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~---~~~~~~-~~~~v~~v~~-D~~~l~~~  147 (250)
                      ++++|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+...   ....+. ...++.++.. +...+.++
T Consensus         8 ~~~~IgiI----G-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v   82 (306)
T 3l6d_A            8 FEFDVSVI----G-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEV   82 (306)
T ss_dssp             CSCSEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHH
T ss_pred             CCCeEEEE----C-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            45789999    5 8999999999999999999999998765544322111   111111 2234433322 34445554


Q ss_pred             hc--C----CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          148 VG--G----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       148 l~--~----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      +.  +    ..-.+||++........+.+.+.+++.|+ +|+-
T Consensus        83 ~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~-~~vd  124 (306)
T 3l6d_A           83 LGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGG-HYVK  124 (306)
T ss_dssp             HTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTC-EEEE
T ss_pred             hcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEEe
Confidence            43  1    12367888888888888888888877776 5553

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.93  E-value=0.0022  Score=54.55  Aligned_cols=103  Identities=17%  Similarity=0.196  Sum_probs=67.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccch-hcCCceEEeC-CHHHHHhhh-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNEI-VSAGGKTVWG-DPAEVGNVV-  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~~-~~~~v~~v~~-D~~~l~~~l-  148 (250)
                      ++|.|+    | .|.+|..+++.|++.||+|++.+|++++.+.+.+....   ...+. ...++-++.. +...+.+++ 
T Consensus         2 ~~I~ii----G-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~   76 (287)
T 3pdu_A            2 TTYGFL----G-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCF   76 (287)
T ss_dssp             CCEEEE----C-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CeEEEE----c-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHc
Confidence            689999    5 89999999999999999999999998766544322111   11111 2234333322 344555544 


Q ss_pred             --cC----C-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 --GG----V-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 --~~----~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                        ++    . +-.+||++..........+.+.+.+.|+ +|+
T Consensus        77 ~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~-~~~  117 (287)
T 3pdu_A           77 GANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG-RFL  117 (287)
T ss_dssp             STTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             CchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC-EEE
Confidence              21    1 2357888888778778888888877665 444

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.91  E-value=0.0014  Score=57.73  Aligned_cols=98  Identities=20%  Similarity=0.266  Sum_probs=64.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ...+|||+    |+ |.||..+++.+...|++|+++++++++.+...+.        ...+..+...|.+.+.++..  .
T Consensus       187 ~g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~--------lGa~~v~~~~~~~~~~~~~~--~  251 (366)
T 1yqd_A          187 PGKHIGIV----GL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN--------FGADSFLVSRDQEQMQAAAG--T  251 (366)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT--------SCCSEEEETTCHHHHHHTTT--C
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------cCCceEEeccCHHHHHHhhC--C
Confidence            56799999    86 9999999999999999999999887654422100        11111122334556666554  4


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|+||+++|... .....++.++..  +++|.++..
T Consensus       252 ~D~vid~~g~~~-~~~~~~~~l~~~--G~iv~~g~~  284 (366)
T 1yqd_A          252 LDGIIDTVSAVH-PLLPLFGLLKSH--GKLILVGAP  284 (366)
T ss_dssp             EEEEEECCSSCC-CSHHHHHHEEEE--EEEEECCCC
T ss_pred             CCEEEECCCcHH-HHHHHHHHHhcC--CEEEEEccC
Confidence            899999998431 123445555443  478888764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.90  E-value=0.00017  Score=55.05  Aligned_cols=71  Identities=14%  Similarity=0.192  Sum_probs=49.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ..++|+|+    | +|.+|+.+++.|.+.|++|++.+|+.+..+.+.+          ..++....  .+++.+++.+  
T Consensus        20 ~~~~v~ii----G-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~----------~~~~~~~~--~~~~~~~~~~--   80 (144)
T 3oj0_A           20 GGNKILLV----G-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE----------KYEYEYVL--INDIDSLIKN--   80 (144)
T ss_dssp             CCCEEEEE----C-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH----------HHTCEEEE--CSCHHHHHHT--
T ss_pred             cCCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH----------HhCCceEe--ecCHHHHhcC--
Confidence            37899999    7 5999999999999999999999998765543211          11222222  2334455555  


Q ss_pred             ccEEEeCCCc
Q 025587          153 FDVVLDNNGK  162 (250)
Q Consensus       153 ~d~Vi~~ag~  162 (250)
                      .|+||.+.+.
T Consensus        81 ~Divi~at~~   90 (144)
T 3oj0_A           81 NDVIITATSS   90 (144)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEEeCCC
Confidence            6999999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.89  E-value=0.0011  Score=57.85  Aligned_cols=101  Identities=16%  Similarity=0.178  Sum_probs=62.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ...++|||+    ||+|.||..+++.+... |++|+++++++++.+...+         ...+..+...|   .+.+.++
T Consensus       169 ~~g~~vlV~----Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          169 DPTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR---------AGADYVINASMQDPLAEIRRI  235 (347)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH---------HTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCCEEEEE----CCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH---------hCCCEEecCCCccHHHHHHHH
Confidence            346899999    99889999999999998 9999999988755432211         11111222223   2334554


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .....+|+||+++|.. ......++.++.  -+++|.++..
T Consensus       236 ~~~~~~d~vi~~~g~~-~~~~~~~~~l~~--~G~iv~~g~~  273 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSE-KTLSVYPKALAK--QGKYVMVGLF  273 (347)
T ss_dssp             TTTSCEEEEEESCCCH-HHHTTGGGGEEE--EEEEEECCSS
T ss_pred             hcCCCceEEEECCCCH-HHHHHHHHHHhc--CCEEEEECCC
Confidence            4312599999999842 122233333333  2478877653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.88  E-value=0.00054  Score=55.40  Aligned_cols=72  Identities=19%  Similarity=0.262  Sum_probs=48.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCCHHHHHhhhcCCcc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      |+|+|+    ||+|.+|.++++.|++.|++|++++|+++..+.+.+.    +..... .++.  .   +++.+++++  .
T Consensus         1 m~i~ii----Ga~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~--~---~~~~~~~~~--~   65 (212)
T 1jay_A            1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE----YRRIAGDASIT--G---MKNEDAAEA--C   65 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH----HHHHHSSCCEE--E---EEHHHHHHH--C
T ss_pred             CeEEEE----cCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hccccccCCCC--h---hhHHHHHhc--C
Confidence            479999    9899999999999999999999999987554432110    000000 1122  1   234445554  6


Q ss_pred             cEEEeCCC
Q 025587          154 DVVLDNNG  161 (250)
Q Consensus       154 d~Vi~~ag  161 (250)
                      |+||++..
T Consensus        66 D~Vi~~~~   73 (212)
T 1jay_A           66 DIAVLTIP   73 (212)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEeCC
Confidence            99999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.88  E-value=0.00053  Score=59.09  Aligned_cols=73  Identities=12%  Similarity=0.216  Sum_probs=50.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCc-eEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D~~~l~~~l~~  150 (250)
                      ..++|+|+    |+ |.+|+.++..|++.|+ +|++.+|+.++.+.+.+.        ..... ..  .+.+++.+.+.+
T Consensus       140 ~~~~vlVl----Ga-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~--------~~~~~~~~--~~~~~~~~~~~~  204 (297)
T 2egg_A          140 DGKRILVI----GA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE--------GDERRSAY--FSLAEAETRLAE  204 (297)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH--------SCSSSCCE--ECHHHHHHTGGG
T ss_pred             CCCEEEEE----Cc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH--------hhhccCce--eeHHHHHhhhcc
Confidence            46899999    75 8899999999999997 999999987655433211        00000 11  144566666665


Q ss_pred             CcccEEEeCCCc
Q 025587          151 VTFDVVLDNNGK  162 (250)
Q Consensus       151 ~~~d~Vi~~ag~  162 (250)
                        .|+||++.+.
T Consensus       205 --aDivIn~t~~  214 (297)
T 2egg_A          205 --YDIIINTTSV  214 (297)
T ss_dssp             --CSEEEECSCT
T ss_pred             --CCEEEECCCC
Confidence              6999999874

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.88  E-value=0.0015  Score=57.06  Aligned_cols=97  Identities=23%  Similarity=0.310  Sum_probs=63.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCcccc----CCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDK----MKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~----~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      .++|.|+    |+ |.+|..++..|+..|+  +|+++++++++.+.    +.+- .    .+...++.+..+|.+    .
T Consensus         5 ~~kI~Vi----Ga-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~----~~~~~~v~i~~~~~~----a   70 (326)
T 3pqe_A            5 VNKVALI----GA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-K----AFAPQPVKTSYGTYE----D   70 (326)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-G----GGSSSCCEEEEECGG----G
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-c----ccccCCeEEEeCcHH----H
Confidence            5789999    85 9999999999999986  89999997654332    1110 0    011123444444543    4


Q ss_pred             hcCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          148 VGGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      +++  .|+||.++|.              |....+.+++.+.+...+ .++.+|
T Consensus        71 ~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           71 CKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            555  5999999982              445577777887776543 455444

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.87  E-value=0.00087  Score=58.54  Aligned_cols=101  Identities=21%  Similarity=0.284  Sum_probs=62.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .+++|.|+    |+ |.+|..++..|+..|.  +|+++++.++..+..... ......+. .++.+..+|.+    .+++
T Consensus         8 ~~~kV~Vi----Ga-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~D-L~~~~~~~-~~~~i~~~~~~----a~~~   76 (326)
T 3vku_A            8 DHQKVILV----GD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAID-LEDALPFT-SPKKIYSAEYS----DAKD   76 (326)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHH-HHTTGGGS-CCCEEEECCGG----GGTT
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhh-Hhhhhhhc-CCcEEEECcHH----HhcC
Confidence            45799999    85 9999999999999886  899999876544311000 00000001 24444445543    3555


Q ss_pred             CcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          151 VTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                        .|+||.++|              .|....+.+.+.+.+...+ .++.+|
T Consensus        77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence              599999998              2555678888888876543 444444

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.87  E-value=0.0033  Score=53.43  Aligned_cols=35  Identities=17%  Similarity=0.227  Sum_probs=29.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEE-EcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l-~R~~  112 (250)
                      ++||.|+    |++|.+|+.+++.+.+. +++++.+ +|+.
T Consensus         7 mikV~V~----Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            7 SMKIAIA----GASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            4799999    99999999999999875 6787774 6654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.84  E-value=0.00052  Score=60.40  Aligned_cols=98  Identities=14%  Similarity=0.144  Sum_probs=65.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCcccc----CCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDK----MKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~----~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      ++||.|+    |++|++|..++..|+..|  .+|+++++.+++.+.    +.+-.+      ....+. +..|   ..+.
T Consensus         8 ~~KV~Vi----GaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~------~~~~i~-~t~d---~~~a   73 (343)
T 3fi9_A            8 EEKLTIV----GAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF------EGLNLT-FTSD---IKEA   73 (343)
T ss_dssp             SSEEEEE----TTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC------TTCCCE-EESC---HHHH
T ss_pred             CCEEEEE----CCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC------CCCceE-EcCC---HHHH
Confidence            5799999    999999999999999998  589999987654332    111000      011222 2233   4455


Q ss_pred             hcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCE--EEEEcC
Q 025587          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQ--FLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~--~v~iSS  187 (250)
                      +++  .|+||.++|              .|....+.+++.+.+...+-  ++.+|-
T Consensus        74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            666  699999998              35666788888887755433  455553

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.80  E-value=0.00063  Score=57.95  Aligned_cols=40  Identities=18%  Similarity=0.169  Sum_probs=34.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~  117 (250)
                      ..++++|+    |+ |.+|+.++..|.+.|. +|+++.|+.++.+.
T Consensus       119 ~~k~~lvl----Ga-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~  159 (272)
T 3pwz_A          119 RNRRVLLL----GA-GGAVRGALLPFLQAGPSELVIANRDMAKALA  159 (272)
T ss_dssp             TTSEEEEE----CC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHH
T ss_pred             cCCEEEEE----Cc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            46899999    75 8999999999999995 99999998766544

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.78  E-value=0.0082  Score=51.39  Aligned_cols=37  Identities=32%  Similarity=0.474  Sum_probs=33.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ++++|.|+    ||.|.+|..+++.|.+.|++|++++|+++
T Consensus        20 ~~~~I~iI----Gg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIV----GGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEE----cCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            45689999    88999999999999999999999998764

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.77  E-value=0.0059  Score=53.70  Aligned_cols=101  Identities=17%  Similarity=0.126  Sum_probs=59.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCC-CccccCCCCCCCccc--c--hhcCCceEEeCCHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGD-ENSDKMKKPPFNRFN--E--IVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~-~~~~~~~~~~~~~~~--~--~~~~~v~~v~~D~~~l~~~  147 (250)
                      +++|.|.    ||+|++|+.+++.|.+.. .+|+.+..+. +....+... +..+.  .  ....++.+...|++.    
T Consensus         4 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~----   74 (350)
T 2ep5_A            4 KIKVSLL----GSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDA-VKWIEQGDIPEEVQDLPIVSTNYED----   74 (350)
T ss_dssp             CEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHH-CCCCSSSSCCHHHHTCBEECSSGGG----
T ss_pred             CcEEEEE----CcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHh-cCcccccccccCCceeEEeeCCHHH----
Confidence            4789999    999999999999998764 6788875221 111111000 00000  0  001122332224433    


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +.+  +|+||.+.+..  ....++..+.+.|. ++|-.|+.
T Consensus        75 ~~~--vDvVf~atp~~--~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           75 HKD--VDVVLSALPNE--LAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             GTT--CSEEEECCCHH--HHHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCChH--HHHHHHHHHHHCCC-EEEECCcc
Confidence            333  89999998743  46667788888887 47776664

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.77  E-value=0.0044  Score=56.41  Aligned_cols=40  Identities=15%  Similarity=0.290  Sum_probs=35.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      +|+|.|+    | .|++|..++..|++.||+|++++|+++..+.+
T Consensus         2 ~mkI~VI----G-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l   41 (450)
T 3gg2_A            2 SLDIAVV----G-IGYVGLVSATCFAELGANVRCIDTDRNKIEQL   41 (450)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEE----C-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHH
Confidence            4799999    5 79999999999999999999999988665544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.77  E-value=0.0032  Score=54.64  Aligned_cols=100  Identities=19%  Similarity=0.152  Sum_probs=59.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccch--hcCCceEEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEI--VSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D~~~l~~~l  148 (250)
                      +++||.|+    |+ |++|..++..|+..|.  +|++++.++++.+....    .+.+.  ...++++..+|    .+.+
T Consensus         6 ~~~KI~Ii----Ga-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~----dl~~~~~~~~~~~i~~~~----~~a~   72 (318)
T 1y6j_A            6 SRSKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAM----DINHGLPFMGQMSLYAGD----YSDV   72 (318)
T ss_dssp             -CCCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHH----HHTTSCCCTTCEEEC--C----GGGG
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHH----HHHHhHHhcCCeEEEECC----HHHh
Confidence            34789999    87 9999999999999987  99999998755442110    00000  00123322233    3346


Q ss_pred             cCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ++  .|+||.++|.              |....+.+++.+.+....-+|.+.|
T Consensus        73 ~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           73 KD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             TT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             CC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            66  6999999983              2334566777776644444444444

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.75  E-value=0.0055  Score=53.55  Aligned_cols=99  Identities=14%  Similarity=0.165  Sum_probs=62.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---C-HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D-~~~l~~~  147 (250)
                      ....+|||+    |+ |.+|...++.+...|++|+++++++++.+...+.         ..+..+...   | .+.+.+.
T Consensus       167 ~~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l---------Ga~~~~~~~~~~~~~~~i~~~  232 (352)
T 1e3j_A          167 QLGTTVLVI----GA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC---------GADVTLVVDPAKEEESSIIER  232 (352)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---------TCSEEEECCTTTSCHHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---------CCCEEEcCcccccHHHHHHHH
Confidence            346799999    86 9999999999888999999998877554422111         111112222   1 3445554


Q ss_pred             hc---CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~---~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ..   +..+|+||++.|.. ......++.++.  -+++|.++.
T Consensus       233 ~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~--~G~iv~~G~  272 (352)
T 1e3j_A          233 IRSAIGDLPNVTIDCSGNE-KCITIGINITRT--GGTLMLVGM  272 (352)
T ss_dssp             HHHHSSSCCSEEEECSCCH-HHHHHHHHHSCT--TCEEEECSC
T ss_pred             hccccCCCCCEEEECCCCH-HHHHHHHHHHhc--CCEEEEEec
Confidence            43   34589999999842 223344555544  358888764

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.75  E-value=0.024  Score=47.31  Aligned_cols=104  Identities=12%  Similarity=0.244  Sum_probs=63.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE-EEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc-CC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG-GV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~-~~  151 (250)
                      ++||.|+    |+ |.+|+.+++.+.+++++++. ++|..+....  -+.+..+.++...++-++...++.+.+.+. ..
T Consensus         3 MmkI~Vi----Ga-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~g--v~v~~dl~~l~~~DVvIDft~p~a~~~~~~l~~   75 (243)
T 3qy9_A            3 SMKILLI----GY-GAMNQRVARLAEEKGHEIVGVIENTPKATTP--YQQYQHIADVKGADVAIDFSNPNLLFPLLDEDF   75 (243)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CC--SCBCSCTTTCTTCSEEEECSCHHHHHHHHTSCC
T ss_pred             ceEEEEE----Cc-CHHHHHHHHHHHhCCCEEEEEEecCccccCC--CceeCCHHHHhCCCEEEEeCChHHHHHHHHHhc
Confidence            4799999    98 99999999999998777665 4555432111  111122222223444444555666555542 33


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ..++|+.+.|.+.+....+.+++++   ..+++.+-
T Consensus        76 g~~vVigTTG~s~e~~~~l~~aa~~---~~v~~a~N  108 (243)
T 3qy9_A           76 HLPLVVATTGEKEKLLNKLDELSQN---MPVFFSAN  108 (243)
T ss_dssp             CCCEEECCCSSHHHHHHHHHHHTTT---SEEEECSS
T ss_pred             CCceEeCCCCCCHHHHHHHHHHHhc---CCEEEECC
Confidence            4789998888766666666666655   34555443

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.74  E-value=0.0044  Score=54.28  Aligned_cols=99  Identities=19%  Similarity=0.156  Sum_probs=60.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCC---CccccCCCCCCCcccchhc-CCceEEeC-CHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD---ENSDKMKKPPFNRFNEIVS-AGGKTVWG-DPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~-~~v~~v~~-D~~~l~~~  147 (250)
                      |++|.|+    |+||++|..+++.|.+. ++++..+....   +.-+.+.+    .+..+.. .++.+... |.++   +
T Consensus         4 M~kv~Iv----GatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~----~~p~~~~~~~~~v~~~~~~~~---~   72 (337)
T 3dr3_A            4 MLNTLIV----GASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISD----LHPQLKGIVELPLQPMSDISE---F   72 (337)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHH----HCGGGTTTCCCBEEEESSGGG---T
T ss_pred             ceEEEEE----CCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHH----hCccccCccceeEeccCCHHH---H
Confidence            4799999    99999999999999884 67888876543   11111100    0000111 12333322 4332   2


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +.+  +|+||.+.+.  ...+.+++.+.+.|. ++|-+|+.
T Consensus        73 ~~~--~Dvvf~a~p~--~~s~~~~~~~~~~g~-~vIDlSa~  108 (337)
T 3dr3_A           73 SPG--VDVVFLATAH--EVSHDLAPQFLEAGC-VVFDLSGA  108 (337)
T ss_dssp             CTT--CSEEEECSCH--HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             hcC--CCEEEECCCh--HHHHHHHHHHHHCCC-EEEEcCCc
Confidence            233  7999999873  335666667777787 67888875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.73  E-value=0.00079  Score=57.58  Aligned_cols=40  Identities=15%  Similarity=0.222  Sum_probs=34.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~  117 (250)
                      ..++|+|+    |+ |.+|+.++..|++.|. +|++.+|+.++.+.
T Consensus       125 ~~k~vlvl----Ga-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  165 (281)
T 3o8q_A          125 KGATILLI----GA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQ  165 (281)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHH
T ss_pred             cCCEEEEE----Cc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHH
Confidence            46899999    76 8899999999999995 99999998765543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.71  E-value=0.00039  Score=59.04  Aligned_cols=40  Identities=15%  Similarity=0.170  Sum_probs=35.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ..++|+|+    |+ |.+|+.++..|++.|++|++.+|+.++.+.
T Consensus       118 ~~~~vlvl----Ga-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~  157 (272)
T 1p77_A          118 PNQHVLIL----GA-GGATKGVLLPLLQAQQNIVLANRTFSKTKE  157 (272)
T ss_dssp             TTCEEEEE----CC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            46899999    86 889999999999999999999998765554

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.71  E-value=0.008  Score=54.92  Aligned_cols=146  Identities=16%  Similarity=0.171  Sum_probs=81.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CC---eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHH----HHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA----EVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~----~l~  145 (250)
                      +++|+|+    | .|.||+.+++.|+++ ++   +|++++......+ +        .+.....+.....|.+    .+.
T Consensus        13 ~~rVlII----G-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~--------~~~~g~~~~~~~Vdadnv~~~l~   78 (480)
T 2ph5_A           13 KNRFVIL----G-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-V--------AQQYGVSFKLQQITPQNYLEVIG   78 (480)
T ss_dssp             CSCEEEE----C-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-H--------HHHHTCEEEECCCCTTTHHHHTG
T ss_pred             CCCEEEE----C-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-H--------HhhcCCceeEEeccchhHHHHHH
Confidence            4689999    6 899999999999886 45   6888876553321 0        1111112223333333    345


Q ss_pred             hhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCcE
Q 025587          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNW  225 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~~  225 (250)
                      +++++  .|+|||.+-  ......++++|.++|+ ++|  .++..  +.+. ..............|...+.+.+..-++
T Consensus        79 aLl~~--~DvVIN~s~--~~~~l~Im~acleaGv-~Yl--DTa~E--~~~p-~~~~~~~~p~~~~~Y~~~~~~~~~~~~~  148 (480)
T 2ph5_A           79 STLEE--NDFLIDVSI--GISSLALIILCNQKGA-LYI--NAATE--PWKE-EFVMEKMALNRRTNYSLREEVLRLKDKT  148 (480)
T ss_dssp             GGCCT--TCEEEECCS--SSCHHHHHHHHHHHTC-EEE--ESSCC--CCCC-----------CCCHHHHHHHHHTTTTTC
T ss_pred             HHhcC--CCEEEECCc--cccCHHHHHHHHHcCC-CEE--ECCCC--cccc-cccccccCcchhhhHHHHHHHHHHHHhc
Confidence            56765  399998663  3356789999999987 554  44321  0000 0000000111235677666655543222


Q ss_pred             EEEecCeeecCCCCCCccccc
Q 025587          226 ASFRPQYMIGSGNNKDCEEWF  246 (250)
Q Consensus       226 ~ilRp~~i~G~~~~~~~~~~~  246 (250)
                      .-   ..|.|-+-+|++..+|
T Consensus       149 ~G---tAilg~G~nPGvvsvf  166 (480)
T 2ph5_A          149 QK---TALITHGANPGLVSHF  166 (480)
T ss_dssp             CS---CEECSCBTTTBHHHHH
T ss_pred             CC---cEEecCCCCccHHHHH
Confidence            21   4667777777765554

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.70  E-value=0.0072  Score=51.27  Aligned_cols=99  Identities=15%  Similarity=0.137  Sum_probs=64.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEeC-CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~~-D~~~l~~~l~  149 (250)
                      |+|.|+    | .|.+|..+++.|++.|++|++.+|+++..+.+.+....   ...+ +...++-++-. ++..+..++.
T Consensus         1 m~i~ii----G-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~   75 (296)
T 2gf2_A            1 MPVGFI----G-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYS   75 (296)
T ss_dssp             CCEEEE----C-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CeEEEE----e-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHh
Confidence            479999    5 79999999999999999999999988665544332211   1112 22344444443 5544554442


Q ss_pred             C-------Cc-ccEEEeCCCcCHHhHHHHHHHHHhCC
Q 025587          150 G-------VT-FDVVLDNNGKNLDAVRPVADWAKSSG  178 (250)
Q Consensus       150 ~-------~~-~d~Vi~~ag~~~~~~~~ll~~~~~~~  178 (250)
                      .       .. -.+|+++++........+.+.+.+.+
T Consensus        76 ~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g  112 (296)
T 2gf2_A           76 GANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMG  112 (296)
T ss_dssp             STTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred             CchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence            2       11 24788888888777777777766644

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=96.69  E-value=0.0057  Score=53.63  Aligned_cols=99  Identities=19%  Similarity=0.168  Sum_probs=62.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCe-EEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHH----H
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE-VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPA----E  143 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~----~  143 (250)
                      ..+.+|||+    |+ |.+|...++.+...|.+ |+++++++++.+..+        ++ ...+..+..   +.+    .
T Consensus       178 ~~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~--------~l-~~~~~~~~~~~~~~~~~~~~  243 (363)
T 3m6i_A          178 RLGDPVLIC----GA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK--------EI-CPEVVTHKVERLSAEESAKK  243 (363)
T ss_dssp             CTTCCEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH--------HH-CTTCEEEECCSCCHHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--------Hh-chhcccccccccchHHHHHH
Confidence            346799999    98 99999999999999987 888888775544221        11 112222221   233    3


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +.+...+..+|+||++.|.. ......++.++.  -++++.++.
T Consensus       244 v~~~t~g~g~Dvvid~~g~~-~~~~~~~~~l~~--~G~iv~~G~  284 (363)
T 3m6i_A          244 IVESFGGIEPAVALECTGVE-SSIAAAIWAVKF--GGKVFVIGV  284 (363)
T ss_dssp             HHHHTSSCCCSEEEECSCCH-HHHHHHHHHSCT--TCEEEECCC
T ss_pred             HHHHhCCCCCCEEEECCCCh-HHHHHHHHHhcC--CCEEEEEcc
Confidence            34444455699999999842 223344455544  358888764

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.69  E-value=0.0046  Score=56.84  Aligned_cols=105  Identities=18%  Similarity=0.193  Sum_probs=67.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC-----C---CCcccchhc----CCceEEeC-C
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-----P---FNRFNEIVS----AGGKTVWG-D  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~-----~---~~~~~~~~~----~~v~~v~~-D  140 (250)
                      +++|.|+    | .|.+|..+++.|++.||+|++.+|+++..+.+.+.     .   ...+.++..    .++.++.. +
T Consensus         4 ~~kIgiI----G-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~   78 (484)
T 4gwg_A            4 QADIALI----G-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKA   78 (484)
T ss_dssp             CBSEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCS
T ss_pred             CCEEEEE----C-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCC
Confidence            4689999    5 79999999999999999999999998765544221     0   112222221    33333322 2


Q ss_pred             HHHH----HhhhcC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          141 PAEV----GNVVGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       141 ~~~l----~~~l~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      ...+    .++... .+-++||++.......+..+.+.+.+.|+ +|+-
T Consensus        79 ~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi-~fvd  126 (484)
T 4gwg_A           79 GQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGI-LFVG  126 (484)
T ss_dssp             SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhcc-cccc
Confidence            1122    222221 12478899888888888888888877776 5554

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.69  E-value=0.0009  Score=57.78  Aligned_cols=95  Identities=15%  Similarity=0.104  Sum_probs=59.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcccE
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDV  155 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d~  155 (250)
                      +|||+    ||+|.+|...++.+...|.+|+++++++++.+.+++         ...+..+...|.+. .+.+.+..+|+
T Consensus       149 ~VlV~----Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~---------lGa~~vi~~~~~~~-~~~~~~~~~d~  214 (324)
T 3nx4_A          149 EVVVT----GASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS---------LGANRILSRDEFAE-SRPLEKQLWAG  214 (324)
T ss_dssp             CEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH---------HTCSEEEEGGGSSC-CCSSCCCCEEE
T ss_pred             eEEEE----CCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---------cCCCEEEecCCHHH-HHhhcCCCccE
Confidence            39999    999999999999999999999999988765543211         11111121122222 22223336999


Q ss_pred             EEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          156 VLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       156 Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ||++.|..  .....++.++.  -++++.++..
T Consensus       215 v~d~~g~~--~~~~~~~~l~~--~G~iv~~G~~  243 (324)
T 3nx4_A          215 AIDTVGDK--VLAKVLAQMNY--GGCVAACGLA  243 (324)
T ss_dssp             EEESSCHH--HHHHHHHTEEE--EEEEEECCCT
T ss_pred             EEECCCcH--HHHHHHHHHhc--CCEEEEEecC
Confidence            99999842  33444444433  3578887654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.68  E-value=0.00097  Score=57.23  Aligned_cols=38  Identities=21%  Similarity=0.378  Sum_probs=33.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      +++|.|+    | .|.+|..++..|++.|++|++++|+++..+
T Consensus        15 ~~~I~VI----G-~G~mG~~iA~~la~~G~~V~~~d~~~~~~~   52 (302)
T 1f0y_A           15 VKHVTVI----G-GGLMGAGIAQVAAATGHTVVLVDQTEDILA   52 (302)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            4689999    6 599999999999999999999999876544

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.66  E-value=0.0047  Score=52.61  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=33.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ++|+|.|+    | .|.+|..++..|.+.||+|++++|+++..+.
T Consensus         2 ~~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~   41 (316)
T 2ew2_A            2 NAMKIAIA----G-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEA   41 (316)
T ss_dssp             --CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCeEEEE----C-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHH
Confidence            34789999    6 5999999999999999999999998755443

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.66  E-value=0.0041  Score=54.95  Aligned_cols=97  Identities=15%  Similarity=0.229  Sum_probs=62.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceE-E-eC----C-HHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WG----D-PAE  143 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v-~~----D-~~~  143 (250)
                      ....+|||+    |+ |.+|...++.+...|. +|+++++++++.+...+           .+... + ..    | .+.
T Consensus       192 ~~g~~VlV~----Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-----------lGa~~vi~~~~~~~~~~~~  255 (378)
T 3uko_A          192 EPGSNVAIF----GL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-----------FGVNEFVNPKDHDKPIQEV  255 (378)
T ss_dssp             CTTCCEEEE----CC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-----------TTCCEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-----------cCCcEEEccccCchhHHHH
Confidence            346799999    98 9999999998888898 89999988866553222           12221 1 11    2 344


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +.++..+ .+|+||++.|.. ......++.++. +-++++.++.
T Consensus       256 i~~~~~g-g~D~vid~~g~~-~~~~~~~~~l~~-g~G~iv~~G~  296 (378)
T 3uko_A          256 IVDLTDG-GVDYSFECIGNV-SVMRAALECCHK-GWGTSVIVGV  296 (378)
T ss_dssp             HHHHTTS-CBSEEEECSCCH-HHHHHHHHTBCT-TTCEEEECSC
T ss_pred             HHHhcCC-CCCEEEECCCCH-HHHHHHHHHhhc-cCCEEEEEcc
Confidence            5555455 699999999842 223333444433 2258888775

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.0085  Score=51.82  Aligned_cols=105  Identities=12%  Similarity=-0.007  Sum_probs=66.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCC-------ccccCCCCC-CC-cccc-hhcCCceEEeCC-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE-------NSDKMKKPP-FN-RFNE-IVSAGGKTVWGD-  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~-------~~~~~~~~~-~~-~~~~-~~~~~v~~v~~D-  140 (250)
                      |+++|.|+    | .|.+|..+++.|++.| |+|++.+|+++       ..+.+.+.. .. ...+ +...++-++..- 
T Consensus        23 M~m~IgvI----G-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~~~~s~~e~~~~aDvVi~avp~   97 (317)
T 4ezb_A           23 MMTTIAFI----G-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSLVVG   97 (317)
T ss_dssp             SCCEEEEE----C-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTCEEESSGGGGGGCSEEEECCCG
T ss_pred             cCCeEEEE----C-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCCCCCCHHHHHhcCCEEEEecCC
Confidence            56899999    5 8999999999999999 99999999862       111111111 11 1112 122343333221 


Q ss_pred             ---HHHHHhhhcCC-cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          141 ---PAEVGNVVGGV-TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       141 ---~~~l~~~l~~~-~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                         .+.+.++.... +-.+||++.+.....+..+.+.+.+.|+ +|+
T Consensus        98 ~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~-~~~  143 (317)
T 4ezb_A           98 AATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKG-SFV  143 (317)
T ss_dssp             GGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSC-EEE
T ss_pred             HHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence               23333333221 2368889988888888888888887766 554

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.63  E-value=0.00068  Score=57.77  Aligned_cols=92  Identities=20%  Similarity=0.196  Sum_probs=56.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC-------------CCCccc-chhcCCceEEeC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-------------PFNRFN-EIVSAGGKTVWG  139 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~-------------~~~~~~-~~~~~~v~~v~~  139 (250)
                      .++|.|+    | .|.+|..+++.|++.|++|++.+|+++..+...+.             ...... +.....+. .. 
T Consensus         4 ~~kV~VI----G-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~-~~-   76 (283)
T 4e12_A            4 ITNVTVL----G-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIR-YS-   76 (283)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCE-EE-
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeE-Ee-
Confidence            4689999    6 59999999999999999999999987654432110             000000 00000111 12 


Q ss_pred             CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh
Q 025587          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS  176 (250)
Q Consensus       140 D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~  176 (250)
                        .++.+++++  .|+||.+...+.+....+++.+.+
T Consensus        77 --~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~  109 (283)
T 4e12_A           77 --DDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGE  109 (283)
T ss_dssp             --SCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHH
T ss_pred             --CCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHh
Confidence              233444555  699999988776666565555444

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.63  E-value=0.008  Score=51.47  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=28.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEE-EcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l-~R~~  112 (250)
                      ++.||.|.    |++|.+|+.+++.+.+. +.+++++ +|+.
T Consensus        20 ~~irV~V~----Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~   57 (288)
T 3ijp_A           20 GSMRLTVV----GANGRMGRELITAIQRRKDVELCAVLVRKG   57 (288)
T ss_dssp             -CEEEEES----STTSHHHHHHHHHHHTCSSEEEEEEBCCTT
T ss_pred             CCeEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            45799999    99999999999998865 6887766 5543

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.61  E-value=0.0099  Score=45.42  Aligned_cols=84  Identities=21%  Similarity=0.160  Sum_probs=55.2

Q ss_pred             CcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.++...+..                .++. +..+.+++   .. 
T Consensus        22 p~~iaVV----Gas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i----------------~G~~-~y~sl~~l---~~-   76 (144)
T 2d59_A           22 YKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV----------------LGRK-CYPSVLDI---PD-   76 (144)
T ss_dssp             CCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----------------TTEE-CBSSGGGC---SS-
T ss_pred             CCEEEEE----ccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeE----------------CCee-ccCCHHHc---CC-
Confidence            5799999    998   8999999999999999866554322111                1222 11123222   22 


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                       .+|.++-+..  ......+++.+.+.|++.+++.
T Consensus        77 -~vDlvvi~vp--~~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           77 -KIEVVDLFVK--PKLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             -CCSEEEECSC--HHHHHHHHHHHHHHTCSEEEEC
T ss_pred             -CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEC
Confidence             3788877643  4677778888888888876543

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.59  E-value=0.0024  Score=56.42  Aligned_cols=99  Identities=12%  Similarity=0.126  Sum_probs=58.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +++|.|.    ||+|++|+.+++.|.+.. .+|+.+.+..+...++.. .+.++......++.     .++ .+.+++  
T Consensus        16 ~~kV~Ii----GAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~-~~~~~~~~v~~dl~-----~~~-~~~~~~--   82 (359)
T 1xyg_A           16 DIRIGLL----GASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMES-VFPHLRAQKLPTLV-----SVK-DADFST--   82 (359)
T ss_dssp             CEEEEEE----CCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHH-HCGGGTTSCCCCCB-----CGG-GCCGGG--
T ss_pred             CcEEEEE----CcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHH-hCchhcCcccccce-----ecc-hhHhcC--
Confidence            3689999    999999999999999886 588888654322111100 00001100000111     111 333443  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +|+||.+.+...  +...+..+ +.|+ ++|-+|+..
T Consensus        83 vDvVf~atp~~~--s~~~a~~~-~aG~-~VId~sa~~  115 (359)
T 1xyg_A           83 VDAVFCCLPHGT--TQEIIKEL-PTAL-KIVDLSADF  115 (359)
T ss_dssp             CSEEEECCCTTT--HHHHHHTS-CTTC-EEEECSSTT
T ss_pred             CCEEEEcCCchh--HHHHHHHH-hCCC-EEEECCccc
Confidence            899999987433  45566666 7676 688888743

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.56  E-value=0.01  Score=52.34  Aligned_cols=96  Identities=14%  Similarity=0.191  Sum_probs=60.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceE-E-eC----C-HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WG----D-PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v-~~----D-~~~l  144 (250)
                      ...+|||+    |+ |.+|...++.+...|. +|+++++++++.+...           ..+... + ..    | .+.+
T Consensus       195 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~v  258 (376)
T 1e3i_A          195 PGSTCAVF----GL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-----------ALGATDCLNPRELDKPVQDVI  258 (376)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----------HhCCcEEEccccccchHHHHH
Confidence            45799999    85 9999999998888998 7999988876544321           112221 1 11    1 2233


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .++..+ .+|+||++.|.. ......++.++.. .+++|.++.
T Consensus       259 ~~~~~~-g~Dvvid~~G~~-~~~~~~~~~l~~~-~G~iv~~G~  298 (376)
T 1e3i_A          259 TELTAG-GVDYSLDCAGTA-QTLKAAVDCTVLG-WGSCTVVGA  298 (376)
T ss_dssp             HHHHTS-CBSEEEESSCCH-HHHHHHHHTBCTT-TCEEEECCC
T ss_pred             HHHhCC-CccEEEECCCCH-HHHHHHHHHhhcC-CCEEEEECC
Confidence            343334 699999999841 2233344444332 158888775

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.52  E-value=0.014  Score=54.33  Aligned_cols=84  Identities=13%  Similarity=0.091  Sum_probs=61.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      ++|+|.    | .|.+|++++++|.+.|++|++++++++..+.+               ..++.+|   .+.+.++ .-.
T Consensus       349 ~~viIi----G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------------~~~i~gD~t~~~~L~~a-gi~  407 (565)
T 4gx0_A          349 ELIFII----G-HGRIGCAAAAFLDRKPVPFILIDRQESPVCND---------------HVVVYGDATVGQTLRQA-GID  407 (565)
T ss_dssp             CCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------------SCEEESCSSSSTHHHHH-TTT
T ss_pred             CCEEEE----C-CCHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------------CCEEEeCCCCHHHHHhc-Ccc
Confidence            789999    6 59999999999999999999999998765532               1567777   5555554 333


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      +.|.+|-+.+.+ +....+...+++.+.+
T Consensus       408 ~ad~vi~~~~~d-~~ni~~~~~ak~l~~~  435 (565)
T 4gx0_A          408 RASGIIVTTNDD-STNIFLTLACRHLHSH  435 (565)
T ss_dssp             SCSEEEECCSCH-HHHHHHHHHHHHHCSS
T ss_pred             ccCEEEEECCCc-hHHHHHHHHHHHHCCC
Confidence            589999888855 3444445556665544

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.51  E-value=0.0042  Score=54.45  Aligned_cols=98  Identities=17%  Similarity=0.246  Sum_probs=61.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ...+|||+    |+ |.+|...++.+...|.+|+++++++++.+...+.        ...+..+...|.+.+.++..  .
T Consensus       180 ~g~~VlV~----Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~--------lGa~~vi~~~~~~~~~~~~~--g  244 (357)
T 2cf5_A          180 PGLRGGIL----GL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD--------LGADDYVIGSDQAKMSELAD--S  244 (357)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT--------SCCSCEEETTCHHHHHHSTT--T
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH--------cCCceeeccccHHHHHHhcC--C
Confidence            56799999    85 9999999998888899999999987654432100        11111122234555555543  4


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|+||++.|... .....++.++.  -++++.++..
T Consensus       245 ~D~vid~~g~~~-~~~~~~~~l~~--~G~iv~~G~~  277 (357)
T 2cf5_A          245 LDYVIDTVPVHH-ALEPYLSLLKL--DGKLILMGVI  277 (357)
T ss_dssp             EEEEEECCCSCC-CSHHHHTTEEE--EEEEEECSCC
T ss_pred             CCEEEECCCChH-HHHHHHHHhcc--CCEEEEeCCC
Confidence            899999998421 12223333333  2478877653

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.49  E-value=0.0042  Score=47.62  Aligned_cols=84  Identities=21%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             CcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCC--CccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGD--ENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~--~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l  148 (250)
                      .++|.|+    |++   |.+|..+++.|++.||+|+.++...  +...                ++.+ ..+.+   ++.
T Consensus        13 p~~IavI----Gas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i~----------------G~~~-~~sl~---el~   68 (145)
T 2duw_A           13 TRTIALV----GASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLL----------------GQQG-YATLA---DVP   68 (145)
T ss_dssp             CCCEEEE----SCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEET----------------TEEC-CSSTT---TCS
T ss_pred             CCEEEEE----CcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccccC----------------Ceec-cCCHH---HcC
Confidence            5789999    987   8899999999999999987776554  2211                1111 11122   222


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      .  .+|+|+-+..  ......+++.+.+.|++.++..
T Consensus        69 ~--~~Dlvii~vp--~~~v~~v~~~~~~~g~~~i~i~  101 (145)
T 2duw_A           69 E--KVDMVDVFRN--SEAAWGVAQEAIAIGAKTLWLQ  101 (145)
T ss_dssp             S--CCSEEECCSC--STHHHHHHHHHHHHTCCEEECC
T ss_pred             C--CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEc
Confidence            2  2687776654  2455566666666677765543

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.48  E-value=0.014  Score=51.32  Aligned_cols=96  Identities=11%  Similarity=0.184  Sum_probs=60.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eC----C-HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WG----D-PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~----D-~~~l  144 (250)
                      ...+|||+    | .|.+|...++.+...|. +|+++++++++.+..+           ..+.. ++ ..    | .+.+
T Consensus       191 ~g~~VlV~----G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~  254 (374)
T 2jhf_A          191 QGSTCAVF----G-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-----------EVGATECVNPQDYKKPIQEVL  254 (374)
T ss_dssp             TTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----------HhCCceEecccccchhHHHHH
Confidence            45799999    8 49999999999988998 7999988876554321           11222 11 11    1 2233


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .++..+ .+|+||++.|.. ......++.++.. .+++|.++.
T Consensus       255 ~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~-~G~iv~~G~  294 (374)
T 2jhf_A          255 TEMSNG-GVDFSFEVIGRL-DTMVTALSCCQEA-YGVSVIVGV  294 (374)
T ss_dssp             HHHTTS-CBSEEEECSCCH-HHHHHHHHHBCTT-TCEEEECSC
T ss_pred             HHHhCC-CCcEEEECCCCH-HHHHHHHHHhhcC-CcEEEEecc
Confidence            333333 699999999841 2233444554442 158888764

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.47  E-value=0.0036  Score=54.61  Aligned_cols=93  Identities=15%  Similarity=0.251  Sum_probs=61.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+.+|||+    |+ |.+|...++.+...|.+|+++++++++.+..           ...+...+..|.+.+.+     
T Consensus       175 ~~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~v~~~~~~~~~-----  233 (348)
T 3two_A          175 TKGTKVGVA----GF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-----------LSMGVKHFYTDPKQCKE-----  233 (348)
T ss_dssp             CTTCEEEEE----SC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-----------HHTTCSEEESSGGGCCS-----
T ss_pred             CCCCEEEEE----CC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HhcCCCeecCCHHHHhc-----
Confidence            356899999    87 9999999999999999999999888665532           22233322245443322     


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+|+||++.|... .....++.++.  -++++.++..
T Consensus       234 ~~D~vid~~g~~~-~~~~~~~~l~~--~G~iv~~G~~  267 (348)
T 3two_A          234 ELDFIISTIPTHY-DLKDYLKLLTY--NGDLALVGLP  267 (348)
T ss_dssp             CEEEEEECCCSCC-CHHHHHTTEEE--EEEEEECCCC
T ss_pred             CCCEEEECCCcHH-HHHHHHHHHhc--CCEEEEECCC
Confidence            4899999998431 23333444433  2478877653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.46  E-value=0.0038  Score=54.49  Aligned_cols=105  Identities=17%  Similarity=0.197  Sum_probs=62.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~  149 (250)
                      +++++|.|+    || |.+|..++..|+..|+ +|++++++++..+..... ..+..........+.. .|   +.+.++
T Consensus         7 ~~~~kI~VI----Ga-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~-l~~~~~~~~~~~~i~~t~d---~~ea~~   77 (331)
T 1pzg_A            7 QRRKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALD-LSHVTSVVDTNVSVRAEYS---YEAALT   77 (331)
T ss_dssp             SCCCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHH-HHHHHHHTTCCCCEEEECS---HHHHHT
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHH-HHhhhhccCCCCEEEEeCC---HHHHhC
Confidence            345799999    87 9999999999999998 999999987655431100 0000000011122222 34   344566


Q ss_pred             CCcccEEEeCCCc-------------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          150 GVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +  .|+||.++|.                   |....+.+.+.+.+....-+|.+.|
T Consensus        78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            6  5999999852                   1233566666666654343443333

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.45  E-value=0.017  Score=48.82  Aligned_cols=103  Identities=17%  Similarity=0.159  Sum_probs=60.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEeC-CHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~~-D~~~l~~~l  148 (250)
                      +|+|.|+    | .|.+|..+++.|.+.|++|++++ +++..+.+.+....   .+.+ +...++-++-. +...+..++
T Consensus         3 ~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~   76 (295)
T 1yb4_A            3 AMKLGFI----G-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVL   76 (295)
T ss_dssp             -CEEEEC----C-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHH
T ss_pred             CCEEEEE----c-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHH
Confidence            4689999    6 79999999999999999999988 76655544322211   1112 22334443333 444444444


Q ss_pred             c-------CCcc-cEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 G-------GVTF-DVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 ~-------~~~~-d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .       .... ..|+++..........+.+.+.+.++ +++
T Consensus        77 ~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~-~~~  118 (295)
T 1yb4_A           77 FGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGA-DYL  118 (295)
T ss_dssp             HSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTE-EEE
T ss_pred             hCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            2       1112 35667765555556666676666443 444

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.45  E-value=0.0073  Score=53.67  Aligned_cols=97  Identities=11%  Similarity=0.096  Sum_probs=62.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-C----HHHHHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-D----PAEVGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-D----~~~l~~  146 (250)
                      ...+|||+    |+ |.+|...++.+...|. +|+++++++++.+..           ...+..++.. +    .+.+.+
T Consensus       185 ~g~~VlV~----Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~i~~~~~~~~~~~v~~  248 (398)
T 1kol_A          185 PGSTVYVA----GA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-----------KAQGFEIADLSLDTPLHEQIAA  248 (398)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-----------HHTTCEEEETTSSSCHHHHHHH
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-----------HHcCCcEEccCCcchHHHHHHH
Confidence            46799999    85 9999999998888998 688888877554422           1223333322 1    234445


Q ss_pred             hhcCCcccEEEeCCCcCH--------------HhHHHHHHHHHhCCCCEEEEEcC
Q 025587          147 VVGGVTFDVVLDNNGKNL--------------DAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~--------------~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ...+..+|+||++.|...              ......++.++..  ++++.++.
T Consensus       249 ~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--G~iv~~G~  301 (398)
T 1kol_A          249 LLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA--GKIGIPGL  301 (398)
T ss_dssp             HHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE--EEEEECSC
T ss_pred             HhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC--CEEEEecc
Confidence            444446999999998531              2344555555543  47887764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.44  E-value=0.0034  Score=55.22  Aligned_cols=94  Identities=17%  Similarity=0.203  Sum_probs=59.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC---CccccCCCCCCCcccchhcCCceEEeC-C-HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD---ENSDKMKKPPFNRFNEIVSAGGKTVWG-D-PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~---~~~~~~~~~~~~~~~~~~~~~v~~v~~-D-~~~l~~~l  148 (250)
                      +++|||+    |+ |.+|..+++.+...|++|+++++++   ++.+..           ...+...+.. | .+.+.+ .
T Consensus       181 g~~VlV~----Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-----------~~~ga~~v~~~~~~~~~~~-~  243 (366)
T 2cdc_A          181 CRKVLVV----GT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-----------EETKTNYYNSSNGYDKLKD-S  243 (366)
T ss_dssp             TCEEEEE----SC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-----------HHHTCEEEECTTCSHHHHH-H
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-----------HHhCCceechHHHHHHHHH-h
Confidence            6899999    99 9999999999999999999999987   443321           1112222211 1 233333 2


Q ss_pred             cCCcccEEEeCCCcCHHhH-HHHHHHHHhCCCCEEEEEcCc
Q 025587          149 GGVTFDVVLDNNGKNLDAV-RPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~-~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      . ..+|+||+++|... .. ...++.++..  +++|.++..
T Consensus       244 ~-~~~d~vid~~g~~~-~~~~~~~~~l~~~--G~iv~~g~~  280 (366)
T 2cdc_A          244 V-GKFDVIIDATGADV-NILGNVIPLLGRN--GVLGLFGFS  280 (366)
T ss_dssp             H-CCEEEEEECCCCCT-HHHHHHGGGEEEE--EEEEECSCC
T ss_pred             C-CCCCEEEECCCChH-HHHHHHHHHHhcC--CEEEEEecC
Confidence            2 34899999998531 12 3334444332  478887753

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.43  E-value=0.016  Score=51.06  Aligned_cols=97  Identities=12%  Similarity=0.173  Sum_probs=60.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceE-E-eC----C-HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-V-WG----D-PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v-~~----D-~~~l  144 (250)
                      ...+|||+    |+ |.+|...++.+...|. +|+++++++++.+..+           ..+... + ..    | .+.+
T Consensus       192 ~g~~VlV~----Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~~  255 (374)
T 1cdo_A          192 PGSTCAVF----GL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-----------VFGATDFVNPNDHSEPISQVL  255 (374)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-----------HTTCCEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----------HhCCceEEeccccchhHHHHH
Confidence            46799999    85 9999999999988998 7999988876554321           112221 1 11    1 2233


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .++..+ .+|+||++.|.. ......++.++.. .+++|.++..
T Consensus       256 ~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~-~G~iv~~G~~  296 (374)
T 1cdo_A          256 SKMTNG-GVDFSLECVGNV-GVMRNALESCLKG-WGVSVLVGWT  296 (374)
T ss_dssp             HHHHTS-CBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECSCC
T ss_pred             HHHhCC-CCCEEEECCCCH-HHHHHHHHHhhcC-CcEEEEEcCC
Confidence            333334 699999999842 2233344444332 1588887753

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.42  E-value=0.034  Score=49.21  Aligned_cols=92  Identities=13%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHH-HHhCCC---eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKE-LLGSGH---EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~-Ll~~G~---~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-D~~~l~~~l~  149 (250)
                      ++|.|.    ||+|++|+.+++. |.++++   +++.+...... ..+        ..+....+.+... |++++    .
T Consensus         2 ~kVaIv----GAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G-~~v--------~~~~g~~i~~~~~~~~~~~----~   64 (367)
T 1t4b_A            2 QNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG-QAA--------PSFGGTTGTLQDAFDLEAL----K   64 (367)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT-SBC--------CGGGTCCCBCEETTCHHHH----H
T ss_pred             cEEEEE----CCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC-CCc--------cccCCCceEEEecCChHHh----c
Confidence            689999    9999999999995 544553   45555553211 111        1111123333333 34443    3


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      +  +|+||.+.|  ....+..+..+.+.|.+ .+|=.|+
T Consensus        65 ~--~DvVf~a~g--~~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           65 A--LDIIVTCQG--GDYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             T--CSEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             C--CCEEEECCC--chhHHHHHHHHHHCCCCEEEEcCCh
Confidence            4  799999988  34566677777788874 4444444

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.42  E-value=0.015  Score=52.57  Aligned_cols=40  Identities=28%  Similarity=0.343  Sum_probs=34.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK  119 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~  119 (250)
                      |+|.|+    | .|++|..++..|++.||+|++++|+++..+.+.
T Consensus         1 mkI~VI----G-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~   40 (436)
T 1mv8_A            1 MRISIF----G-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (436)
T ss_dssp             CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence            479999    6 799999999999999999999999876665543

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.42  E-value=0.001  Score=57.98  Aligned_cols=104  Identities=17%  Similarity=0.155  Sum_probs=65.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc--------------CCceEEeC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS--------------AGGKTVWG  139 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~--------------~~v~~v~~  139 (250)
                      ..+|.|+    | +|.+|+.++..++..|++|++++.+++..+...+.-...+..+..              ..+. .  
T Consensus         6 ~~~VaVi----G-aG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~-~--   77 (319)
T 3ado_A            6 AGDVLIV----G-SGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLIS-S--   77 (319)
T ss_dssp             -CEEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEE-E--
T ss_pred             CCeEEEE----C-CcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcc-c--
Confidence            4689999    5 699999999999999999999998765432110000000000000              0111 1  


Q ss_pred             CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          140 DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       140 D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       ..++.+++++  +|.||.+.--+++.-+.+...+.+.-...-|+.|++
T Consensus        78 -~~~l~~a~~~--ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNT  123 (319)
T 3ado_A           78 -CTNLAEAVEG--VVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSS  123 (319)
T ss_dssp             -ECCHHHHTTT--EEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred             -ccchHhHhcc--CcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhh
Confidence             1235556666  799999999999998888888877433344554443

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.39  E-value=0.039  Score=48.25  Aligned_cols=103  Identities=14%  Similarity=0.210  Sum_probs=63.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceE-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKT-  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~-  136 (250)
                      ..++|+|+    | .|.+|.++++.|+..| -++++++++.-...++..+.+....+              ...+++++ 
T Consensus        33 ~~~~VlIv----G-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~  107 (340)
T 3rui_A           33 KNTKVLLL----G-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDAT  107 (340)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEE
T ss_pred             hCCEEEEE----C-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEE
Confidence            46899999    4 7999999999999999 57888888664444443332211111              01233443 


Q ss_pred             -EeC-----------------CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          137 -VWG-----------------DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       137 -v~~-----------------D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                       +..                 |.+.+.+.+.+  +|+||++.. |...-..+-++|.+.++ .+|.
T Consensus       108 ~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~--~DlVvd~tD-n~~tR~lin~~c~~~~~-plI~  169 (340)
T 3rui_A          108 GVKLSIPMIGHKLVNEEAQHKDFDRLRALIKE--HDIIFLLVD-SRESRWLPSLLSNIENK-TVIN  169 (340)
T ss_dssp             EECCCCCCTTSCCSCHHHHHHHHHHHHHHHHH--CSEEEECCS-STGGGHHHHHHHHHTTC-EEEE
T ss_pred             EEeccccccCcccchhhhhcCCHHHHHhhhcc--CCEEEecCC-CHHHHHHHHHHHHHcCC-cEEE
Confidence             221                 23455666766  799999875 33333344566777665 4554

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.38  E-value=0.019  Score=52.59  Aligned_cols=42  Identities=21%  Similarity=0.391  Sum_probs=36.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK  120 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~  120 (250)
                      .|+|.|+     |.|++|..++..|++.||+|++++|+++..+.+.+
T Consensus         8 ~~~I~VI-----G~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~   49 (478)
T 2y0c_A            8 SMNLTII-----GSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNN   49 (478)
T ss_dssp             CCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CceEEEE-----CcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHC
Confidence            4799999     58999999999999999999999998876665543

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.38  E-value=0.0041  Score=54.72  Aligned_cols=95  Identities=22%  Similarity=0.255  Sum_probs=60.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---C-HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---D-PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D-~~~l~~~  147 (250)
                      .+.+|||+    ||+|.+|...++.+.. .|.+|+++++++++.+.+.           ..+...+..   | .+.+.+.
T Consensus       171 ~g~~VlV~----Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-----------~lGad~vi~~~~~~~~~v~~~  235 (363)
T 4dvj_A          171 AAPAILIV----GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-----------SLGAHHVIDHSKPLAAEVAAL  235 (363)
T ss_dssp             SEEEEEEE----STTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-----------HTTCSEEECTTSCHHHHHHTT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-----------HcCCCEEEeCCCCHHHHHHHh
Confidence            45789999    9999999999987776 6899999998775544221           122222221   1 3344443


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                       .+..+|+||++.|.. ......++.++.  -+++|.++
T Consensus       236 -~~~g~Dvvid~~g~~-~~~~~~~~~l~~--~G~iv~~g  270 (363)
T 4dvj_A          236 -GLGAPAFVFSTTHTD-KHAAEIADLIAP--QGRFCLID  270 (363)
T ss_dssp             -CSCCEEEEEECSCHH-HHHHHHHHHSCT--TCEEEECS
T ss_pred             -cCCCceEEEECCCch-hhHHHHHHHhcC--CCEEEEEC
Confidence             444699999998832 123344444444  35788774

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.37  E-value=0.018  Score=50.62  Aligned_cols=105  Identities=12%  Similarity=0.134  Sum_probs=63.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccch--------------hcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEI--------------VSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~--------------~~~~v~--  135 (250)
                      ...+|+|+    | .|.+|.++++.|+..| -++++++++.-...++..+.+....++              ..++++  
T Consensus       117 ~~~~Vlvv----G-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~  191 (353)
T 3h5n_A          117 KNAKVVIL----G-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS  191 (353)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEE
Confidence            46799999    6 5889999999999999 579999987543344333222111110              123333  


Q ss_pred             EEeCC--HHH-HHhhhcCCcccEEEeCCCcCHH-hHHHHHHHHHhCCCCEEEEEcC
Q 025587          136 TVWGD--PAE-VGNVVGGVTFDVVLDNNGKNLD-AVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       136 ~v~~D--~~~-l~~~l~~~~~d~Vi~~ag~~~~-~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+..+  .+. +.+ +.+  +|+||++.. |.. .-..+-++|.+.++ .+|+.+.
T Consensus       192 ~~~~~i~~~~~~~~-~~~--~DlVvd~~D-n~~~~r~~ln~~c~~~~~-p~i~~~~  242 (353)
T 3h5n_A          192 EIALNINDYTDLHK-VPE--ADIWVVSAD-HPFNLINWVNKYCVRANQ-PYINAGY  242 (353)
T ss_dssp             EEECCCCSGGGGGG-SCC--CSEEEECCC-CSTTHHHHHHHHHHHTTC-CEEEEEE
T ss_pred             EeecccCchhhhhH-hcc--CCEEEEecC-ChHHHHHHHHHHHHHhCC-CEEEEEE
Confidence            33322  222 555 555  799999864 333 33344577888776 4665543

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=96.37  E-value=0.023  Score=49.84  Aligned_cols=36  Identities=28%  Similarity=0.404  Sum_probs=25.7

Q ss_pred             cCcEEEEEecCCCcch-hh--HHHHHHHHHhCCCeEEEEEcC
Q 025587           73 EKKKVLIVNTNSGGHA-VI--GFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG-~i--G~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      |+++|+|+   +|||| -|  +.+|+++|.++||+|..+...
T Consensus         1 M~~~i~i~---~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            1 MKGNVLIM---AGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             --CEEEEE---CCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCcEEEE---cCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            56788888   24464 23  677899999999999988643

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.37  E-value=0.0029  Score=51.70  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=33.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE-EEcCCCcccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDK  117 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~-l~R~~~~~~~  117 (250)
                      +++|.|+    | +|.+|..+++.|.+.|++|++ .+|+++..+.
T Consensus        23 mmkI~II----G-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~   62 (220)
T 4huj_A           23 MTTYAII----G-AGAIGSALAERFTAAQIPAIIANSRGPASLSS   62 (220)
T ss_dssp             SCCEEEE----E-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHH
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHH
Confidence            5789999    6 899999999999999999999 7888766553

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.37  E-value=0.0061  Score=53.41  Aligned_cols=100  Identities=12%  Similarity=0.110  Sum_probs=60.0

Q ss_pred             cC-cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC------C-HHH
Q 025587           73 EK-KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG------D-PAE  143 (250)
Q Consensus        73 ~~-~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~------D-~~~  143 (250)
                      .. .+|||+    ||+|.+|...++.+...|.+|++++++.++.+..       ...+...+.. ++..      | .+.
T Consensus       166 ~g~~~VlV~----Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~-------~~~~~~lGa~~vi~~~~~~~~~~~~~  234 (364)
T 1gu7_A          166 PGKDWFIQN----GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV-------VASLKELGATQVITEDQNNSREFGPT  234 (364)
T ss_dssp             TTTCEEEES----CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH-------HHHHHHHTCSEEEEHHHHHCGGGHHH
T ss_pred             CCCcEEEEC----CCCcHHHHHHHHHHHHCCCEEEEEecCccccHHH-------HHHHHhcCCeEEEecCccchHHHHHH
Confidence            45 899999    9999999999998888899999998776541000       0001111222 1211      1 223


Q ss_pred             HHhhh--cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          144 VGNVV--GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l--~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +.++.  .+..+|+||++.|...  ....++.++.  -++++.++.
T Consensus       235 i~~~t~~~~~g~Dvvid~~G~~~--~~~~~~~l~~--~G~~v~~g~  276 (364)
T 1gu7_A          235 IKEWIKQSGGEAKLALNCVGGKS--STGIARKLNN--NGLMLTYGG  276 (364)
T ss_dssp             HHHHHHHHTCCEEEEEESSCHHH--HHHHHHTSCT--TCEEEECCC
T ss_pred             HHHHhhccCCCceEEEECCCchh--HHHHHHHhcc--CCEEEEecC
Confidence            33333  2345999999998432  2233444443  358888765

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.37  E-value=0.016  Score=49.20  Aligned_cols=104  Identities=16%  Similarity=0.172  Sum_probs=59.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC---cccc-hhcCCceEEeC-CHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN---RFNE-IVSAGGKTVWG-DPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~---~~~~-~~~~~v~~v~~-D~~~l~~~l  148 (250)
                      +++|.|+    | .|.+|..+++.|.+.|++|++++|+++..+.+.+....   .+.+ +...++-++-. ++..+..++
T Consensus         4 ~~~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~   78 (301)
T 3cky_A            4 SIKIGFI----G-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVM   78 (301)
T ss_dssp             CCEEEEE----C-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             CCEEEEE----C-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHH
Confidence            4789999    6 79999999999999999999999987655443322111   1111 12233333333 333333333


Q ss_pred             c---C----Cc-ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          149 G---G----VT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       149 ~---~----~~-~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      .   +    .. -..|+++..........+.+.+.+.++ +++
T Consensus        79 ~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~-~~~  120 (301)
T 3cky_A           79 NGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGI-DYV  120 (301)
T ss_dssp             HSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             cCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC-eEE
Confidence            1   1    01 135666655444445556666655443 444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.36  E-value=0.0045  Score=53.86  Aligned_cols=101  Identities=21%  Similarity=0.192  Sum_probs=63.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~  151 (250)
                      +++|.|+    | .|.+|..++..|+..|. +|++++++++..+..... ..+..........+. ..|.    +.+++ 
T Consensus         5 ~~kI~ii----G-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~d-L~~~~~~~~~~~~v~~t~d~----~a~~~-   73 (321)
T 3p7m_A            5 RKKITLV----G-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALD-LLQTCPIEGVDFKVRGTNDY----KDLEN-   73 (321)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCCEEEESCG----GGGTT-
T ss_pred             CCEEEEE----C-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHH-HHhhhhhcCCCcEEEEcCCH----HHHCC-
Confidence            4789999    8 59999999999999988 999999988654321100 000000111233333 2443    45666 


Q ss_pred             cccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                       .|+||.++|.              |....+.+++.+.+.... .+|.+|
T Consensus        74 -aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           74 -SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             -CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             -CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence             5999999882              455677777777775533 555554

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.36  E-value=0.0034  Score=54.86  Aligned_cols=92  Identities=18%  Similarity=0.141  Sum_probs=55.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc--CCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++|.|.    ||+|++|+.+++.|.+++|++..+..  +.+...    .   .+. +....+.+...|++   . + +  
T Consensus         1 mkVaI~----GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g----~---~l~-~~g~~i~v~~~~~~---~-~-~--   61 (331)
T 2yv3_A            1 MRVAVV----GATGAVGREILKVLEARNFPLSELRLYASPRSAG----V---RLA-FRGEEIPVEPLPEG---P-L-P--   61 (331)
T ss_dssp             CCEEEE----TTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSS----C---EEE-ETTEEEEEEECCSS---C-C-C--
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCC----C---EEE-EcCceEEEEeCChh---h-c-C--
Confidence            479999    99999999999999988776443321  110000    0   000 11112333333433   2 3 3  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|+||.+.|.  ..++..+....+.|. ++|-.|+.
T Consensus        62 ~DvV~~a~g~--~~s~~~a~~~~~~G~-~vId~s~~   94 (331)
T 2yv3_A           62 VDLVLASAGG--GISRAKALVWAEGGA-LVVDNSSA   94 (331)
T ss_dssp             CSEEEECSHH--HHHHHHHHHHHHTTC-EEEECSSS
T ss_pred             CCEEEECCCc--cchHHHHHHHHHCCC-EEEECCCc
Confidence            7999999873  334556666667776 67888875

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.35  E-value=0.0032  Score=54.27  Aligned_cols=99  Identities=20%  Similarity=0.262  Sum_probs=58.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |+|.|+    |+ |.+|..++..|+..|+  +|++++++++..+..... ....... ..+..+...|.    +.+++  
T Consensus         1 mkI~VI----Ga-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~-l~~~~~~-~~~~~i~~~~~----~a~~~--   67 (304)
T 2v6b_A            1 MKVGVV----GT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED-IAHAAPV-SHGTRVWHGGH----SELAD--   67 (304)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH-HTTSCCT-TSCCEEEEECG----GGGTT--
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh-hhhhhhh-cCCeEEEECCH----HHhCC--
Confidence            589999    87 9999999999999999  999999986533221000 0000000 01233322343    34565  


Q ss_pred             ccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          153 FDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       153 ~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      .|+||.+++.              |....+.+++.+.+.... .+|.+|
T Consensus        68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            6999999863              344556777777664433 344433

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.34  E-value=0.012  Score=51.67  Aligned_cols=96  Identities=9%  Similarity=0.084  Sum_probs=59.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-C----C-HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-G----D-PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~----D-~~~l  144 (250)
                      ...+|||+    |+ |.+|...++.+...|. +|+++++++++.+..+           ..+.. ++. .    | .+.+
T Consensus       191 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~vi~~~~~~~~~~~~i  254 (373)
T 1p0f_A          191 PGSTCAVF----GL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-----------ELGATECLNPKDYDKPIYEVI  254 (373)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-----------HTTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-----------HcCCcEEEecccccchHHHHH
Confidence            46799999    85 9999999998888898 7999988876544321           12222 111 1    1 2233


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .++..+ .+|+||++.|.. ......++.++.. .+++|.++.
T Consensus       255 ~~~t~g-g~Dvvid~~g~~-~~~~~~~~~l~~~-~G~iv~~G~  294 (373)
T 1p0f_A          255 CEKTNG-GVDYAVECAGRI-ETMMNALQSTYCG-SGVTVVLGL  294 (373)
T ss_dssp             HHHTTS-CBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECCC
T ss_pred             HHHhCC-CCCEEEECCCCH-HHHHHHHHHHhcC-CCEEEEEcc
Confidence            333334 699999999841 2233334444332 158888774

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.34  E-value=0.0078  Score=52.44  Aligned_cols=102  Identities=19%  Similarity=0.218  Sum_probs=64.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~  151 (250)
                      +++|.|+    |+ |.+|..++..|+..|+ +|++++++++..+..... ..+..........+. ..|.    +.+++ 
T Consensus         7 ~~kI~vi----Ga-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~d-l~~~~~~~~~~~~v~~t~d~----~a~~~-   75 (324)
T 3gvi_A            7 RNKIALI----GS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLD-IAESSPVDGFDAKFTGANDY----AAIEG-   75 (324)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHH-HHHHHHHHTCCCCEEEESSG----GGGTT-
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHH-HhchhhhcCCCCEEEEeCCH----HHHCC-
Confidence            4689999    87 9999999999999998 999999988654321100 000000011123333 2443    45666 


Q ss_pred             cccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                       .|+||.++|.              |....+.+++.+.+.... .+|.+|-
T Consensus        76 -aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           76 -ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             -CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence             5999999882              455567777777765433 4555553

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=96.29  E-value=0.012  Score=54.21  Aligned_cols=105  Identities=14%  Similarity=0.198  Sum_probs=65.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC-----CCC---Ccccchh-c---CCceEEeC-
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-----PPF---NRFNEIV-S---AGGKTVWG-  139 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~-----~~~---~~~~~~~-~---~~v~~v~~-  139 (250)
                      |.++|.|+     |.|.+|..+++.|++.||+|++.+|+++..+.+.+     ...   ....+.. .   .++.++.. 
T Consensus         9 ~~~~IgvI-----GlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp   83 (497)
T 2p4q_A            9 MSADFGLI-----GLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVK   83 (497)
T ss_dssp             CCCSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCC
T ss_pred             CCCCEEEE-----eeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcC
Confidence            55789999     58999999999999999999999999876554432     111   1122221 1   34333322 


Q ss_pred             CHHHHHhhh----cCCc-ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          140 DPAEVGNVV----GGVT-FDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       140 D~~~l~~~l----~~~~-~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +...+.+++    .... -++||++.......+..+.+.+.+.|+ +|+
T Consensus        84 ~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~-~~v  131 (497)
T 2p4q_A           84 AGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI-LFV  131 (497)
T ss_dssp             SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             ChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC-cee
Confidence            212222222    2111 268888887777777777777776665 454

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.29  E-value=0.0059  Score=53.53  Aligned_cols=97  Identities=19%  Similarity=0.108  Sum_probs=60.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHH-HHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPA-EVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~-~l~~~l~~  150 (250)
                      ...+|||+    |+ |.+|...++.+...|.+|+++++++++.+..           ...+.. ++..+.+ ++.+.+.+
T Consensus       179 ~g~~VlV~----Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~v~~~~~~~~~~~~~~~  242 (360)
T 1piw_A          179 PGKKVGIV----GL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-----------MKMGADHYIATLEEGDWGEKYFD  242 (360)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-----------HHHTCSEEEEGGGTSCHHHHSCS
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----------HHcCCCEEEcCcCchHHHHHhhc
Confidence            46799999    99 9999999998888899999999987655422           111222 2222222 34344432


Q ss_pred             CcccEEEeCCCcC-HHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          151 VTFDVVLDNNGKN-LDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       151 ~~~d~Vi~~ag~~-~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       .+|+||++.|.. .......++.++..  ++++.++..
T Consensus       243 -~~D~vid~~g~~~~~~~~~~~~~l~~~--G~iv~~g~~  278 (360)
T 1piw_A          243 -TFDLIVVCASSLTDIDFNIMPKAMKVG--GRIVSISIP  278 (360)
T ss_dssp             -CEEEEEECCSCSTTCCTTTGGGGEEEE--EEEEECCCC
T ss_pred             -CCCEEEECCCCCcHHHHHHHHHHhcCC--CEEEEecCC
Confidence             589999999851 11122333344332  478877653

>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}

Probab=96.28  E-value=0.039  Score=41.27  Aligned_cols=97  Identities=21%  Similarity=0.169  Sum_probs=65.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .+++|+|.    | +|..|..+++.|.+. ||+|+++.........           ....++.++ + .+++.+.++..
T Consensus         3 ~~~~vlIi----G-aG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g-----------~~i~g~pV~-g-~~~l~~~~~~~   64 (141)
T 3nkl_A            3 AKKKVLIY----G-AGSAGLQLANMLRQGKEFHPIAFIDDDRKKHK-----------TTMQGITIY-R-PKYLERLIKKH   64 (141)
T ss_dssp             CCEEEEEE----C-CSHHHHHHHHHHHHSSSEEEEEEECSCGGGTT-----------CEETTEEEE-C-GGGHHHHHHHH
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhCCCcEEEEEEECCcccCC-----------CEecCeEEE-C-HHHHHHHHHHC
Confidence            35789999    5 689999999999876 8998887654321110           011244433 4 67787777665


Q ss_pred             cccEEEeCCC-cCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          152 TFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       152 ~~d~Vi~~ag-~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+|.|+-+.+ ........+++.+.+.|+ ++..+-+.
T Consensus        65 ~id~viia~~~~~~~~~~~i~~~l~~~gv-~v~~vP~~  101 (141)
T 3nkl_A           65 CISTVLLAVPSASQVQKKVIIESLAKLHV-EVLTIPNL  101 (141)
T ss_dssp             TCCEEEECCTTSCHHHHHHHHHHHHTTTC-EEEECCCH
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHHHHHcCC-eEEECCCH
Confidence            6888876655 344567789999999888 45555443

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.27  E-value=0.012  Score=51.63  Aligned_cols=96  Identities=9%  Similarity=0.112  Sum_probs=59.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eC----C-HHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WG----D-PAEV  144 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~----D-~~~l  144 (250)
                      ...+|||+    |+ |.+|...++.+...|. +|+++++++++.+...           ..+.. ++ ..    | .+.+
T Consensus       190 ~g~~VlV~----Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~v  253 (373)
T 2fzw_A          190 PGSVCAVF----GL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-----------EFGATECINPQDFSKPIQEVL  253 (373)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-----------HHTCSEEECGGGCSSCHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-----------HcCCceEeccccccccHHHHH
Confidence            46799999    85 9999999998888898 7999988876544221           11222 11 11    1 2233


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .++..+ .+|+||++.|.. ......++.++.. .+++|.++.
T Consensus       254 ~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~-~G~iv~~G~  293 (373)
T 2fzw_A          254 IEMTDG-GVDYSFECIGNV-KVMRAALEACHKG-WGVSVVVGV  293 (373)
T ss_dssp             HHHTTS-CBSEEEECSCCH-HHHHHHHHTBCTT-TCEEEECSC
T ss_pred             HHHhCC-CCCEEEECCCcH-HHHHHHHHhhccC-CcEEEEEec
Confidence            333333 699999999842 2233344444332 158888775

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.26  E-value=0.0084  Score=45.63  Aligned_cols=87  Identities=11%  Similarity=0.094  Sum_probs=52.8

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      ..++|.|+    |++   |.+|..+++.|++.||+|+.++.... .+.+             .++.+ ..+.++   +-+
T Consensus        12 ~p~~vaVv----Gas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~-~~~i-------------~G~~~-~~sl~e---l~~   69 (140)
T 1iuk_A           12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQ-GEEL-------------FGEEA-VASLLD---LKE   69 (140)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGGGT-TSEE-------------TTEEC-BSSGGG---CCS
T ss_pred             CCCEEEEE----CCCCCCCChHHHHHHHHHHCCCEEEEeCCCcc-cCcC-------------CCEEe-cCCHHH---CCC
Confidence            35789999    998   89999999999999998666543310 1110             11111 112222   222


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                        .+|.++-+..  ...+..+++.+.+.|++.+++.
T Consensus        70 --~vDlavi~vp--~~~~~~v~~~~~~~gi~~i~~~  101 (140)
T 1iuk_A           70 --PVDILDVFRP--PSALMDHLPEVLALRPGLVWLQ  101 (140)
T ss_dssp             --CCSEEEECSC--HHHHTTTHHHHHHHCCSCEEEC
T ss_pred             --CCCEEEEEeC--HHHHHHHHHHHHHcCCCEEEEc
Confidence              3687776643  3556666667767788766543

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=96.26  E-value=0.022  Score=42.38  Aligned_cols=100  Identities=19%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH----HHHH
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP----AEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~----~~l~  145 (250)
                      .+++|.|+    |++   +..|..+.+.|++.||+|+.+.-..+.....+  -+..+.++...++-.+...+    +-++
T Consensus         3 ~p~siAVV----GaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~--~y~sl~dlp~vDlavi~~p~~~v~~~v~   76 (122)
T 3ff4_A            3 AMKKTLIL----GATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKT--IINERPVIEGVDTVTLYINPQNQLSEYN   76 (122)
T ss_dssp             CCCCEEEE----TCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEE--CBCSCCCCTTCCEEEECSCHHHHGGGHH
T ss_pred             CCCEEEEE----ccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCee--ccCChHHCCCCCEEEEEeCHHHHHHHHH
Confidence            35789999    997   67899999999999999998876544433221  11222233222333333333    3333


Q ss_pred             hhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      ++.+. .+..|+-..|..   ...+++.|+++|+ ++|
T Consensus        77 e~~~~-g~k~v~~~~G~~---~~e~~~~a~~~Gi-rvv  109 (122)
T 3ff4_A           77 YILSL-KPKRVIFNPGTE---NEELEEILSENGI-EPV  109 (122)
T ss_dssp             HHHHH-CCSEEEECTTCC---CHHHHHHHHHTTC-EEE
T ss_pred             HHHhc-CCCEEEECCCCC---hHHHHHHHHHcCC-eEE
Confidence            33322 245666666653   3577888888887 566

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.25  E-value=0.0018  Score=56.16  Aligned_cols=35  Identities=14%  Similarity=0.247  Sum_probs=31.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~  112 (250)
                      ..+++||+    |+ |.+|++++..|.+.|. +|+++.|+.
T Consensus       147 ~gk~~lVl----GA-GGaaraia~~L~~~G~~~v~v~nRt~  182 (312)
T 3t4e_A          147 RGKTMVLL----GA-GGAATAIGAQAAIEGIKEIKLFNRKD  182 (312)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             CCCEEEEE----Cc-CHHHHHHHHHHHHcCCCEEEEEECCC
Confidence            46899999    75 8999999999999997 899999983

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.25  E-value=0.014  Score=51.11  Aligned_cols=95  Identities=18%  Similarity=0.253  Sum_probs=59.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC---HHH----
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAE----  143 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D---~~~----  143 (250)
                      .+.+|||+    |+ |.+|...++.+...|. +|+++++++++.+..           ...+.. ++..+   .++    
T Consensus       171 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~~  234 (356)
T 1pl8_A          171 LGHKVLVC----GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-----------KEIGADLVLQISKESPQEIARK  234 (356)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-----------HHTTCSEEEECSSCCHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-----------HHhCCCEEEcCcccccchHHHH
Confidence            46799999    86 9999999998888998 899999877544322           111222 22222   222    


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +.+... ..+|+||++.|.. ......++.++.  -++++.++.
T Consensus       235 i~~~~~-~g~D~vid~~g~~-~~~~~~~~~l~~--~G~iv~~G~  274 (356)
T 1pl8_A          235 VEGQLG-CKPEVTIECTGAE-ASIQAGIYATRS--GGTLVLVGL  274 (356)
T ss_dssp             HHHHHT-SCCSEEEECSCCH-HHHHHHHHHSCT--TCEEEECSC
T ss_pred             HHHHhC-CCCCEEEECCCCh-HHHHHHHHHhcC--CCEEEEEec
Confidence            222222 3589999999842 223444555544  358888764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.25  E-value=0.0052  Score=52.26  Aligned_cols=40  Identities=23%  Similarity=0.314  Sum_probs=33.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      |+|+|.|+    | .|.+|..+++.|.+.|++|++++|+++..+.
T Consensus         4 M~m~i~ii----G-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~   43 (299)
T 1vpd_A            4 MTMKVGFI----G-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIAD   43 (299)
T ss_dssp             --CEEEEE----C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             ccceEEEE----C-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            45799999    6 7999999999999999999999998755443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.24  E-value=0.0048  Score=51.82  Aligned_cols=67  Identities=16%  Similarity=0.222  Sum_probs=48.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .+ +|+|+    | +|.+|++++..|++.|. +|++++|+.++.+.+.+.            ....  +.+++.+.+.+ 
T Consensus       108 ~~-~vlii----G-aGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~------------~~~~--~~~~~~~~~~~-  166 (253)
T 3u62_A          108 KE-PVVVV----G-AGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFP------------VKIF--SLDQLDEVVKK-  166 (253)
T ss_dssp             CS-SEEEE----C-CSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSS------------CEEE--EGGGHHHHHHT-
T ss_pred             CC-eEEEE----C-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHH------------cccC--CHHHHHhhhcC-
Confidence            35 89999    6 59999999999999998 899999998776655332            0111  23445555555 


Q ss_pred             cccEEEeCCC
Q 025587          152 TFDVVLDNNG  161 (250)
Q Consensus       152 ~~d~Vi~~ag  161 (250)
                       .|+||++..
T Consensus       167 -aDiVInatp  175 (253)
T 3u62_A          167 -AKSLFNTTS  175 (253)
T ss_dssp             -CSEEEECSS
T ss_pred             -CCEEEECCC
Confidence             588888754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.22  E-value=0.0056  Score=53.72  Aligned_cols=75  Identities=21%  Similarity=0.163  Sum_probs=51.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CCH--HHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GDP--AEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D~--~~l~~  146 (250)
                      ....+|||+    |+ |.+|...++.+... |.+|+++++++++.+..           ...+.. ++. .+.  +.+.+
T Consensus       185 ~~g~~VlV~----Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi~~~~~~~~~v~~  248 (359)
T 1h2b_A          185 YPGAYVAIV----GV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-----------ERLGADHVVDARRDPVKQVME  248 (359)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-----------HHTTCSEEEETTSCHHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-----------HHhCCCEEEeccchHHHHHHH
Confidence            346799999    98 89999999988888 99999999887554422           112222 222 222  33444


Q ss_pred             hhcCCcccEEEeCCCc
Q 025587          147 VVGGVTFDVVLDNNGK  162 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~  162 (250)
                      +-.+..+|+||++.|.
T Consensus       249 ~~~g~g~Dvvid~~G~  264 (359)
T 1h2b_A          249 LTRGRGVNVAMDFVGS  264 (359)
T ss_dssp             HTTTCCEEEEEESSCC
T ss_pred             HhCCCCCcEEEECCCC
Confidence            4334369999999984

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.22  E-value=0.0085  Score=52.54  Aligned_cols=39  Identities=23%  Similarity=0.288  Sum_probs=34.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      ..++|.|+    | .|-||..+++.|.+.|++|++.+|+++..+
T Consensus         7 ~~~kIgII----G-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~   45 (341)
T 3ktd_A            7 ISRPVCIL----G-LGLIGGSLLRDLHAANHSVFGYNRSRSGAK   45 (341)
T ss_dssp             CSSCEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSCHHHHH
T ss_pred             CCCEEEEE----e-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            35789999    6 799999999999999999999999875544

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.22  E-value=0.011  Score=52.15  Aligned_cols=95  Identities=18%  Similarity=0.235  Sum_probs=60.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D~~~l~~~l~~  150 (250)
                      ...+|||+    |+ |.+|...++.+...|.+|+++++++++.+..           ...+.. ++ ..+.+.+.++.. 
T Consensus       194 ~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~~-  256 (369)
T 1uuf_A          194 PGKKVGVV----GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-----------KALGADEVVNSRNADEMAAHLK-  256 (369)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----------HHHTCSEEEETTCHHHHHTTTT-
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCCcEEeccccHHHHHHhhc-
Confidence            46799999    87 7899999999888999999999887654422           111222 22 233443444433 


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       .+|+||++.|... .....++.++..  +++|.++..
T Consensus       257 -g~Dvvid~~g~~~-~~~~~~~~l~~~--G~iv~~G~~  290 (369)
T 1uuf_A          257 -SFDFILNTVAAPH-NLDDFTTLLKRD--GTMTLVGAP  290 (369)
T ss_dssp             -CEEEEEECCSSCC-CHHHHHTTEEEE--EEEEECCCC
T ss_pred             -CCCEEEECCCCHH-HHHHHHHHhccC--CEEEEeccC
Confidence             4899999998421 122334444432  478877653

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.22  E-value=0.012  Score=50.66  Aligned_cols=90  Identities=21%  Similarity=0.183  Sum_probs=54.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc--CCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV--GDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R--~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |+|.|+    | .|.+|..++..|.+.||+|++++|  +++..+.+.+.............  +...+.+++.+++++  
T Consensus         1 m~I~ii----G-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~--   71 (335)
T 1txg_A            1 MIVSIL----G-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNG--VEIFWPEQLEKCLEN--   71 (335)
T ss_dssp             CEEEEE----S-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCS--EEEECGGGHHHHHTT--
T ss_pred             CEEEEE----C-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccc--eEEecHHhHHHHHhc--
Confidence            479999    6 599999999999999999999999  76555443322110000000001  112233345555555  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHH
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAK  175 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~  175 (250)
                      .|+||-+....  .+..+++.+.
T Consensus        72 ~D~vi~~v~~~--~~~~v~~~i~   92 (335)
T 1txg_A           72 AEVVLLGVSTD--GVLPVMSRIL   92 (335)
T ss_dssp             CSEEEECSCGG--GHHHHHHHHT
T ss_pred             CCEEEEcCChH--HHHHHHHHHh
Confidence            69898887643  4455555443

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.20  E-value=0.036  Score=48.60  Aligned_cols=112  Identities=17%  Similarity=0.147  Sum_probs=68.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCc------cc------ch--hcCCce--
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNR------FN------EI--VSAGGK--  135 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~------~~------~~--~~~~v~--  135 (250)
                      ...+|+|+    | .|.+|.++++.|+..|. ++++++.+.=...++..+-+..      ..      .+  ..++++  
T Consensus        35 ~~~~Vliv----G-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~  109 (346)
T 1y8q_A           35 RASRVLLV----G-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVK  109 (346)
T ss_dssp             HTCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEE
T ss_pred             hCCeEEEE----C-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEE
Confidence            45799999    5 68999999999999995 7888876542222221111110      00      01  123343  


Q ss_pred             EEeCCH-HHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          136 TVWGDP-AEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       136 ~v~~D~-~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      .+..+. +...+.+.+  +|+||++.. +...-..+-++|++.++ .+|..++.+.+|.
T Consensus       110 ~~~~~~~~~~~~~~~~--~dvVv~~~d-~~~~r~~ln~~~~~~~i-p~i~~~~~G~~G~  164 (346)
T 1y8q_A          110 VDTEDIEKKPESFFTQ--FDAVCLTCC-SRDVIVKVDQICHKNSI-KFFTGDVFGYHGY  164 (346)
T ss_dssp             EECSCGGGCCHHHHTT--CSEEEEESC-CHHHHHHHHHHHHHTTC-EEEEEEEEBTEEE
T ss_pred             EEecccCcchHHHhcC--CCEEEEcCC-CHHHHHHHHHHHHHcCC-CEEEEeecccEEE
Confidence            333332 223455665  799998754 56666667788888775 7888777666664

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=96.18  E-value=0.07  Score=45.83  Aligned_cols=91  Identities=9%  Similarity=0.044  Sum_probs=58.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh----
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV----  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l----  148 (250)
                      +++|.|+    |..|++|...++.|.+.+.+|+++. ++++.. ...+.          ....-...|.+++.+.+    
T Consensus         3 mirvgiI----G~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~----------~~~~~~~~~~~~ll~~~~~l~   67 (312)
T 3o9z_A            3 MTRFALT----GLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSF----------FPEAEFFTEPEAFEAYLEDLR   67 (312)
T ss_dssp             CCEEEEE----CTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGT----------CTTCEEESCHHHHHHHHHHHH
T ss_pred             ceEEEEE----CCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhh----------CCCCceeCCHHHHHHHhhhhc
Confidence            5799999    8779999999999998888877664 444331 11100          01122344666555433    


Q ss_pred             -cCCcccEEEeCCC-------------------------cCHHhHHHHHHHHHhCCC
Q 025587          149 -GGVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       149 -~~~~~d~Vi~~ag-------------------------~~~~~~~~ll~~~~~~~~  179 (250)
                       +..++|+|+-+..                         .+......+++++++.|+
T Consensus        68 ~~~~~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~  124 (312)
T 3o9z_A           68 DRGEGVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEARTGR  124 (312)
T ss_dssp             HTTCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCC
T ss_pred             ccCCCCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence             4456898887755                         356677777777777665

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.17  E-value=0.0078  Score=51.55  Aligned_cols=93  Identities=14%  Similarity=0.181  Sum_probs=60.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+++|+|+    | .|.+|+.+++.|...|++|++.+|..+..+.+           ...+++.+  +.+++.+++++ 
T Consensus       155 l~g~~v~Ii----G-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g~~~~--~~~~l~~~l~~-  215 (300)
T 2rir_A          155 IHGSQVAVL----G-LGRTGMTIARTFAALGANVKVGARSSAHLARI-----------TEMGLVPF--HTDELKEHVKD-  215 (300)
T ss_dssp             STTSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTCEEE--EGGGHHHHSTT-
T ss_pred             CCCCEEEEE----c-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HHCCCeEE--chhhHHHHhhC-
Confidence            356899999    6 59999999999999999999999986433211           11133322  23567777766 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .|+|+.+........ ..+..+++  -..+|.++.
T Consensus       216 -aDvVi~~~p~~~i~~-~~~~~mk~--g~~lin~a~  247 (300)
T 2rir_A          216 -IDICINTIPSMILNQ-TVLSSMTP--KTLILDLAS  247 (300)
T ss_dssp             -CSEEEECCSSCCBCH-HHHTTSCT--TCEEEECSS
T ss_pred             -CCEEEECCChhhhCH-HHHHhCCC--CCEEEEEeC
Confidence             699998877533221 23333332  235666654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.17  E-value=0.0045  Score=53.68  Aligned_cols=97  Identities=18%  Similarity=0.201  Sum_probs=62.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccc---hhcCCceEE-eCCHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTV-WGDPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~---~~~~~v~~v-~~D~~~l~~~l  148 (250)
                      |+|.|+    |+ |.+|..++..|+..|.  +|++++++++..+....    .+..   ....+..+. ..|.    +.+
T Consensus         1 Mkv~Vi----Ga-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~----DL~~~~~~~~~~~~v~~~~~~----~a~   67 (314)
T 3nep_X            1 MKVTVI----GA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKAL----DMRESSPIHGFDTRVTGTNDY----GPT   67 (314)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHH----HHHHHHHHHTCCCEEEEESSS----GGG
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHH----HHhccccccCCCcEEEECCCH----HHh
Confidence            589999    86 9999999999999886  99999998865432100    0010   011223333 2333    345


Q ss_pred             cCCcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          149 GGVTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                      ++  .|+||.++|.              |....+.+.+.+.+.... .++.+|
T Consensus        68 ~~--aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           68 ED--SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             TT--CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             CC--CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            55  5999999983              455577777777776543 455544

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.16  E-value=0.036  Score=50.81  Aligned_cols=43  Identities=14%  Similarity=0.183  Sum_probs=37.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC-CC-eEEEEEcCCC----ccccCCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS-GH-EVTIMTVGDE----NSDKMKK  120 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~-~V~~l~R~~~----~~~~~~~  120 (250)
                      +.|+|.|+     |.|++|..++..|++. || +|++++|+++    ..+.+.+
T Consensus        17 ~~mkIaVI-----GlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~   65 (478)
T 3g79_A           17 PIKKIGVL-----GMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR   65 (478)
T ss_dssp             SCCEEEEE-----CCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred             CCCEEEEE-----CcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh
Confidence            45799999     5899999999999999 99 9999999998    6665543

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.16  E-value=0.003  Score=53.92  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=32.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      ..++|+|+    |+ |.+|+++++.|++.| +|++.+|+.++.+
T Consensus       127 ~~k~vlV~----Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~  164 (287)
T 1nvt_A          127 KDKNIVIY----GA-GGAARAVAFELAKDN-NIIIANRTVEKAE  164 (287)
T ss_dssp             CSCEEEEE----CC-SHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred             CCCEEEEE----Cc-hHHHHHHHHHHHHCC-CEEEEECCHHHHH
Confidence            45899999    87 599999999999999 9999999875544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.16  E-value=0.0051  Score=53.64  Aligned_cols=102  Identities=20%  Similarity=0.190  Sum_probs=61.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~  150 (250)
                      ++++|.|+    || |.+|..++..|+..|+ +|++++++++..+..... ..+..........+.. .|.    +.+++
T Consensus        13 ~~~kI~Vi----Ga-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~-l~~~~~~~~~~~~i~~t~d~----~al~~   82 (328)
T 2hjr_A           13 MRKKISII----GA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALD-LNHCMALIGSPAKIFGENNY----EYLQN   82 (328)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHH-HHHHHHHHTCCCCEEEESCG----GGGTT
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHhHhhccCCCCEEEECCCH----HHHCC
Confidence            45799999    87 9999999999999998 999999987655531100 0000000001122222 343    34566


Q ss_pred             CcccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          151 VTFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                        .|+||.++|.              |....+.+.+.+.+.... .+|.+|
T Consensus        83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence              6999999862              344466666666664333 344443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.15  E-value=0.0086  Score=51.15  Aligned_cols=93  Identities=13%  Similarity=0.163  Sum_probs=60.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+++|+|+    | .|.||+.+++.|...|.+|++.+|..+..+..           ...++..+  +.+++.+++.+ 
T Consensus       153 l~g~~v~Ii----G-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g~~~~--~~~~l~~~l~~-  213 (293)
T 3d4o_A          153 IHGANVAVL----G-LGRVGMSVARKFAALGAKVKVGARESDLLARI-----------AEMGMEPF--HISKAAQELRD-  213 (293)
T ss_dssp             STTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTSEEE--EGGGHHHHTTT-
T ss_pred             CCCCEEEEE----e-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HHCCCeec--ChhhHHHHhcC-
Confidence            346899999    6 69999999999999999999999986433211           11233322  34567777766 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .|+|+.+........ ..++.+++ + ..+|.++.
T Consensus       214 -aDvVi~~~p~~~i~~-~~l~~mk~-~-~~lin~ar  245 (293)
T 3d4o_A          214 -VDVCINTIPALVVTA-NVLAEMPS-H-TFVIDLAS  245 (293)
T ss_dssp             -CSEEEECCSSCCBCH-HHHHHSCT-T-CEEEECSS
T ss_pred             -CCEEEECCChHHhCH-HHHHhcCC-C-CEEEEecC
Confidence             699998876433222 33444443 2 35666664

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.14  E-value=0.01  Score=52.51  Aligned_cols=98  Identities=16%  Similarity=0.223  Sum_probs=63.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC---HHH---
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD---PAE---  143 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D---~~~---  143 (250)
                      ....+|||+    | +|.+|...++.+...| .+|+++++++++.+.+.           ..+.. ++..+   .++   
T Consensus       194 ~~g~~VlV~----G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-----------~lGa~~vi~~~~~~~~~~~~  257 (380)
T 1vj0_A          194 FAGKTVVIQ----G-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-----------EIGADLTLNRRETSVEERRK  257 (380)
T ss_dssp             CBTCEEEEE----C-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-----------HTTCSEEEETTTSCHHHHHH
T ss_pred             CCCCEEEEE----C-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-----------HcCCcEEEeccccCcchHHH
Confidence            346799999    8 8999999999998899 69999998875544221           11222 22222   233   


Q ss_pred             -HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          144 -VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       144 -l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                       +.++..+..+|+||++.|.. ......++.++..  +++|.++..
T Consensus       258 ~v~~~~~g~g~Dvvid~~g~~-~~~~~~~~~l~~~--G~iv~~G~~  300 (380)
T 1vj0_A          258 AIMDITHGRGADFILEATGDS-RALLEGSELLRRG--GFYSVAGVA  300 (380)
T ss_dssp             HHHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHHhCCCCCcEEEECCCCH-HHHHHHHHHHhcC--CEEEEEecC
Confidence             33333444699999999842 1233445555443  478887653

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.13  E-value=0.0042  Score=53.41  Aligned_cols=100  Identities=15%  Similarity=0.173  Sum_probs=62.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~~  151 (250)
                      |+|.|+    |+ |.+|..++..|+..|+  +|++++++++..+..... ..+..........+.. .|    .+++++ 
T Consensus         1 MkI~Vi----Ga-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~d-l~~~~~~~~~~~~i~~t~d----~~a~~~-   69 (294)
T 1oju_A            1 MKLGFV----GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGIDKYPKIVGGAD----YSLLKG-   69 (294)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH-HHHHHHTTTCCCEEEEESC----GGGGTT-
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHH-HHhhhhhcCCCCEEEEeCC----HHHhCC-
Confidence            589999    88 9999999999999998  999999987654311000 0000000111223332 34    445666 


Q ss_pred             cccEEEeCCCc--------------CHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                       .|+||.++|.              |....+.+++.+.+.+.. .+|.+|
T Consensus        70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence             5999999982              455577777777776543 455555

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.13  E-value=0.0018  Score=60.12  Aligned_cols=40  Identities=25%  Similarity=0.247  Sum_probs=31.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      .+++++|+    || |.+|+++++.|++.|++|++++|+.++.+.
T Consensus       363 ~~k~vlV~----Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~  402 (523)
T 2o7s_A          363 ASKTVVVI----GA-GGAGKALAYGAKEKGAKVVIANRTYERALE  402 (523)
T ss_dssp             ---CEEEE----CC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHH
T ss_pred             CCCEEEEE----CC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            35789999    88 799999999999999999999998755443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.13  E-value=0.01  Score=51.90  Aligned_cols=93  Identities=13%  Similarity=0.115  Sum_probs=61.2

Q ss_pred             cEEEEEecCCCcchhhHHHH-HHHH-HhCCCe-EEEEEcCCC---ccccCCCCCCCcccchhcCCceEEeC---CHHHHH
Q 025587           75 KKVLIVNTNSGGHAVIGFYL-AKEL-LGSGHE-VTIMTVGDE---NSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVG  145 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l-~~~L-l~~G~~-V~~l~R~~~---~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~  145 (250)
                      .+|||+    |+ |.+|... ++.+ ...|.+ |++++++++   +.+.+           ...+...+..   |..++.
T Consensus       174 ~~VlV~----Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-----------~~lGa~~v~~~~~~~~~i~  237 (357)
T 2b5w_A          174 SSAFVL----GN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-----------EELDATYVDSRQTPVEDVP  237 (357)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-----------HHTTCEEEETTTSCGGGHH
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-----------HHcCCcccCCCccCHHHHH
Confidence            799999    98 9999999 8877 777987 999999876   44422           1223333311   222255


Q ss_pred             hhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ++ .+ .+|+||++.|.. ......++.++..  ++++.++..
T Consensus       238 ~~-~g-g~Dvvid~~g~~-~~~~~~~~~l~~~--G~iv~~g~~  275 (357)
T 2b5w_A          238 DV-YE-QMDFIYEATGFP-KHAIQSVQALAPN--GVGALLGVP  275 (357)
T ss_dssp             HH-SC-CEEEEEECSCCH-HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             Hh-CC-CCCEEEECCCCh-HHHHHHHHHHhcC--CEEEEEeCC
Confidence            55 55 699999999842 2334445555443  478887753

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.12  E-value=0.0043  Score=53.02  Aligned_cols=42  Identities=10%  Similarity=0.153  Sum_probs=35.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMK  119 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~  119 (250)
                      ..++|+|+    |+ |.+|+.++..|.+.|. +|+++.|..++.+.+.
T Consensus       121 ~~k~vlvl----Ga-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          121 KNNICVVL----GS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             TTSEEEEE----CS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             cCCEEEEE----CC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            46899999    74 8999999999999997 8999999987665543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.12  E-value=0.0078  Score=53.54  Aligned_cols=98  Identities=17%  Similarity=0.148  Sum_probs=63.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC-C----HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG-D----PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~-D----~~~l~  145 (250)
                      ....+|||+    |+ |.+|...++.+...|. +|+++++++++.+...           ..+..++.. +    .+.+.
T Consensus       184 ~~g~~VlV~----Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-----------~lGa~~i~~~~~~~~~~~~~  247 (398)
T 2dph_A          184 KPGSHVYIA----GA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-----------DAGFETIDLRNSAPLRDQID  247 (398)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-----------TTTCEEEETTSSSCHHHHHH
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-----------HcCCcEEcCCCcchHHHHHH
Confidence            346799999    86 9999999998888898 8999998876544321           123333322 2    23444


Q ss_pred             hhhcCCcccEEEeCCCcCH-------------HhHHHHHHHHHhCCCCEEEEEcC
Q 025587          146 NVVGGVTFDVVLDNNGKNL-------------DAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~-------------~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +...+..+|+||++.|...             ......++.++..  ++++.++.
T Consensus       248 ~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--G~iv~~G~  300 (398)
T 2dph_A          248 QILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG--GAIGIPGI  300 (398)
T ss_dssp             HHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE--EEEECCSC
T ss_pred             HHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC--CEEEEecc
Confidence            4444446999999998542             2344555555543  47877664

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.09  E-value=0.002  Score=57.14  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=52.8

Q ss_pred             ccCcEEEEEecCCC-cchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-C---HHHHH
Q 025587           72 AEKKKVLIVNTNSG-GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~G-gtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-D---~~~l~  145 (250)
                      ....+|||.    | |+|.+|...++.+...|.+|+++++++++.+.+.+           .+.. ++.. +   .+.+.
T Consensus       169 ~~g~~vlV~----gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----------lGa~~~~~~~~~~~~~~v~  233 (379)
T 3iup_A          169 LEGHSALVH----TAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-----------QGAVHVCNAASPTFMQDLT  233 (379)
T ss_dssp             HTTCSCEEE----SSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-----------TTCSCEEETTSTTHHHHHH
T ss_pred             cCCCEEEEE----CCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----------CCCcEEEeCCChHHHHHHH
Confidence            346789999    8 99999999999988889999999988755443211           1222 2222 2   34444


Q ss_pred             hhhcCCcccEEEeCCCc
Q 025587          146 NVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~  162 (250)
                      ++..+..+|+||++.|.
T Consensus       234 ~~t~~~g~d~v~d~~g~  250 (379)
T 3iup_A          234 EALVSTGATIAFDATGG  250 (379)
T ss_dssp             HHHHHHCCCEEEESCEE
T ss_pred             HHhcCCCceEEEECCCc
Confidence            44444458999999984

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.06  E-value=0.0074  Score=51.82  Aligned_cols=90  Identities=16%  Similarity=0.241  Sum_probs=55.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..+.+|||+    || |.+|...++.+...|.+|++++ ++++.+.           ....+...+..|   .++ + +.
T Consensus       141 ~~g~~VlV~----Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~-----------~~~lGa~~v~~d---~~~-v-~~  198 (315)
T 3goh_A          141 TKQREVLIV----GF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQAL-----------AAKRGVRHLYRE---PSQ-V-TQ  198 (315)
T ss_dssp             CSCCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHH-----------HHHHTEEEEESS---GGG-C-CS
T ss_pred             CCCCEEEEE----CC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHH-----------HHHcCCCEEEcC---HHH-h-CC
Confidence            356899999    99 9999999998888899999998 6554432           222344433323   222 2 44


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+|+||++.|...  ....++.++.  -++++.++.
T Consensus       199 g~Dvv~d~~g~~~--~~~~~~~l~~--~G~~v~~g~  230 (315)
T 3goh_A          199 KYFAIFDAVNSQN--AAALVPSLKA--NGHIICIQD  230 (315)
T ss_dssp             CEEEEECC---------TTGGGEEE--EEEEEEECC
T ss_pred             CccEEEECCCchh--HHHHHHHhcC--CCEEEEEeC
Confidence            6999999998532  2233344433  247887753

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.06  E-value=0.0041  Score=54.16  Aligned_cols=95  Identities=11%  Similarity=0.204  Sum_probs=61.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--H-HH-HHh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--P-AE-VGN  146 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~-~~-l~~  146 (250)
                      ...+|||+    |+ |.+|...++.+...  |.+|+++++++++.+..           ...+...+. |  . ++ +.+
T Consensus       170 ~g~~VlV~----Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~~vi-~~~~~~~~~~~  232 (344)
T 2h6e_A          170 AEPVVIVN----GI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-----------LELGADYVS-EMKDAESLINK  232 (344)
T ss_dssp             SSCEEEEE----CC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-----------HHHTCSEEE-CHHHHHHHHHH
T ss_pred             CCCEEEEE----CC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-----------HHhCCCEEe-ccccchHHHHH
Confidence            56899999    98 99999999998888  99999999877554321           111222211 2  2 22 333


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +-.+..+|+||++.|.. ......++.++..  ++++.++.
T Consensus       233 ~~~g~g~D~vid~~g~~-~~~~~~~~~l~~~--G~iv~~g~  270 (344)
T 2h6e_A          233 LTDGLGASIAIDLVGTE-ETTYNLGKLLAQE--GAIILVGM  270 (344)
T ss_dssp             HHTTCCEEEEEESSCCH-HHHHHHHHHEEEE--EEEEECCC
T ss_pred             hhcCCCccEEEECCCCh-HHHHHHHHHhhcC--CEEEEeCC
Confidence            33343599999999852 2344455555543  47887765

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.05  E-value=0.005  Score=55.21  Aligned_cols=72  Identities=25%  Similarity=0.320  Sum_probs=51.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..+++|+|+    |+ |.+|+.+++.|...|. +|++++|+.++.+.+.          ...+...  .+.+++.+.+.+
T Consensus       165 l~g~~VlIi----Ga-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la----------~~~g~~~--~~~~~l~~~l~~  227 (404)
T 1gpj_A          165 LHDKTVLVV----GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELA----------RDLGGEA--VRFDELVDHLAR  227 (404)
T ss_dssp             CTTCEEEEE----SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----------HHHTCEE--CCGGGHHHHHHT
T ss_pred             ccCCEEEEE----Ch-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH----------HHcCCce--ecHHhHHHHhcC
Confidence            357899999    76 9999999999999998 8999999875432211          0112222  244566677765


Q ss_pred             CcccEEEeCCCc
Q 025587          151 VTFDVVLDNNGK  162 (250)
Q Consensus       151 ~~~d~Vi~~ag~  162 (250)
                        .|+||++.+.
T Consensus       228 --aDvVi~at~~  237 (404)
T 1gpj_A          228 --SDVVVSATAA  237 (404)
T ss_dssp             --CSEEEECCSS
T ss_pred             --CCEEEEccCC
Confidence              7999999873

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.04  E-value=0.015  Score=50.78  Aligned_cols=87  Identities=17%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             CcEEEEEecCCCcchhhHH-HHHHHHHhC-CCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~-~l~~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|.|+    | +|.+|. .+++.|.+. +++|+++ +|+++..+.+.+          ..++..+ .   +++++++.
T Consensus        27 ~~rigiI----G-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------~~g~~~~-~---~~~~ll~~   87 (350)
T 3rc1_A           27 PIRVGVI----G-CADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTE----------RFGGEPV-E---GYPALLER   87 (350)
T ss_dssp             CEEEEEE----S-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHH----------HHCSEEE-E---SHHHHHTC
T ss_pred             ceEEEEE----c-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHH----------HcCCCCc-C---CHHHHhcC
Confidence            4689999    5 799998 788888877 7887754 666544432211          1133332 2   34444544


Q ss_pred             CcccEEEeCCC-------------------------cCHHhHHHHHHHHHhCCC
Q 025587          151 VTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       151 ~~~d~Vi~~ag-------------------------~~~~~~~~ll~~~~~~~~  179 (250)
                      .++|+|+.+..                         .++.....+++++++.|+
T Consensus        88 ~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~  141 (350)
T 3rc1_A           88 DDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGL  141 (350)
T ss_dssp             TTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence            44677776544                         356677777777777665

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.03  E-value=0.051  Score=49.34  Aligned_cols=41  Identities=15%  Similarity=0.327  Sum_probs=36.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK  120 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~  120 (250)
                      .+|-|+     |.|++|..++..|++.||+|++++|++++.+.+.+
T Consensus         9 ~~~~vI-----GlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~   49 (446)
T 4a7p_A            9 VRIAMI-----GTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ   49 (446)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred             eEEEEE-----cCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence            578999     58999999999999999999999999988776654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.03  E-value=0.0046  Score=53.64  Aligned_cols=102  Identities=16%  Similarity=0.224  Sum_probs=60.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +++|.|+    |+ |.+|..++..|+.+|  .+|++++++++..+..... ..........++++...+    .+++++ 
T Consensus         6 ~~KI~II----Ga-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~d-l~~~~~~~~~~~~v~~~~----~~a~~~-   74 (317)
T 3d0o_A            6 GNKVVLI----GN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMD-LKHATPYSPTTVRVKAGE----YSDCHD-   74 (317)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHH-HHHHGGGSSSCCEEEECC----GGGGTT-
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhh-HHhhhhhcCCCeEEEeCC----HHHhCC-
Confidence            4699999    88 999999999999888  5899999876433311000 000000111233433333    344666 


Q ss_pred             cccEEEeCCCc--------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGK--------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~--------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .|+||.++|.              |....+.+.+.+.+....-+|.+.|
T Consensus        75 -aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           75 -ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             -CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence             5999999983              3344666666666655444444433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-11
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	6e-10
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-09
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-08
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-06
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-06
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-06
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	1e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.002
d1f0ka_	351	c.87.1.2 (A:) Peptidoglycan biosynthesis glycosylt	0.002
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d1rrva_	401	c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am	0.004
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.004
d1pn3a_	391	c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA	0.004
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	0.004

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 59.1 bits (142), Expect = 6e-11
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 32/192 (16%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE----NSDKMKK-PPFNRFNE 128
           K++V I     G   ++G  + ++L   G    ++   DE    +S  +       R ++
Sbjct: 2   KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQ 57

Query: 129 IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA 188
           +  A  K                      D   +N+     +   A  + V + LF+ S+
Sbjct: 58  VYLAAAKVGGIVA----------NNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107

Query: 189 GIY-----KPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFRPQYMIG 235
            IY     +P  E   ++G +   +        AG    E Y  +   ++ S  P  + G
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 236 SGNNKDCEEWFF 247
             +N        
Sbjct: 168 PHDNFHPSNSHV 179

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 6e-10
 Identities = 27/163 (16%), Positives = 60/163 (36%), Gaps = 12/163 (7%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           KK+ I     G     G     + + +G+EVT++     +S ++        + +V    
Sbjct: 4   KKIAIF----GATGQTGLTTLAQAVQAGYEVTVL---VRDSSRLPSEGPRPAHVVVGDVL 56

Query: 135 KTVWGDPAEVG--NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK 192
           +    D    G   V+  +     L       +  R +    K+ GV + +  +SA +  
Sbjct: 57  QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLL- 115

Query: 193 PADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
              +P  V   +      H+++ K + E+   + +  P ++  
Sbjct: 116 --WDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGD 156

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 1e-09
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMKKPPFNRFNEI 129
           +K++LI    +GG   +G +L  +L+  GHEVT++    T    N +         F  I
Sbjct: 1   RKRILI----TGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG--HENFELI 54

Query: 130 VSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK----NLDAVRPVADWAKSSGVKQFLFI 185
                + ++ +  ++ ++    +    + N  K    N      +   AK  G +  L  
Sbjct: 55  NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR-LLLA 113

Query: 186 SSAGIYKPADEPPHVEGDVVKPD-------------AGHVQVEKYISENFSNWASFRPQY 232
           S++ +Y   +  P  E      +                     Y+ +        R   
Sbjct: 114 STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFN 173

Query: 233 MIGSGNNKD 241
             G   + +
Sbjct: 174 TFGPRMHMN 182

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 51.7 bits (122), Expect = 2e-08
 Identities = 26/181 (14%), Positives = 48/181 (26%), Gaps = 15/181 (8%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           +K +VLIV    GG   IG  +    +  GH   ++   +  S+  K             
Sbjct: 2   KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKV---QMLLYFKQL 54

Query: 133 GGKTVWGD------PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS 186
           G K +           +    V  V   +       ++     + +  K +G  +    S
Sbjct: 55  GAKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114

Query: 187 SAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWF 246
             G+    D   H             +V + I      +         G       +   
Sbjct: 115 EFGMDP--DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDG 172

Query: 247 F 247
            
Sbjct: 173 H 173

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 51.3 bits (122), Expect = 3e-08
 Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 26/155 (16%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG 134
           K  LI    +G     G YLA+ LL  G+EV  +     + +  +     +     +   
Sbjct: 2   KVALI----TGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKF 57

Query: 135 KTVWGD---PAEVGNVVGGVTFDVVLDNNGK----------------NLDAVRPVADWAK 175
              +GD    + +  ++  V  D V +                    +      + +  +
Sbjct: 58  HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIR 117

Query: 176 SSGVKQ---FLFISSAGIYKPADEPPHVEGDVVKP 207
             G+++   F   S++ +Y    E P  E     P
Sbjct: 118 FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP 152

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 46.7 bits (109), Expect = 1e-06
 Identities = 26/179 (14%), Positives = 52/179 (29%), Gaps = 11/179 (6%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           + ++L++    G    IG ++AK  L  GH   ++      S   +K          ++G
Sbjct: 3   RSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASG 56

Query: 134 GKTVWGDPAEVGNVVGGV--TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIY 191
              V G   +  ++V  V     V+       +++   +    K  G  +  F S  G  
Sbjct: 57  ANIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116

Query: 192 KPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNNKDCEEWFFDRK 250
                       V +      +V + I      +         G       +       
Sbjct: 117 VDNVHAVEPAKSVFEV---KAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP 172

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 29/183 (15%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM----TVGDENSDKMK----KPPFN 124
           + K  LI    +G    IG  L + LL    +V  +    T    N D+++    +  ++
Sbjct: 15  QPKVWLI----TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70

Query: 125 RFNEI-------VSAGGKTVWGDPAEVGNVVGGVTFDVV--LDNNGKNLDAVRPVADWAK 175
            F  I                 D       +G V   +   + +N  N+D    +   A+
Sbjct: 71  NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130

Query: 176 SSGVKQFLFISSAGIYKPADEPPHVEGDVVKP--------DAGHVQVEKYISENFSNWAS 227
            + V+ F + +S+  Y      P VE  + KP            +  + +      +   
Sbjct: 131 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190

Query: 228 FRP 230
            R 
Sbjct: 191 LRY 193

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 2e-06
 Identities = 23/204 (11%), Positives = 48/204 (23%), Gaps = 34/204 (16%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP------------- 121
           + V ++   +G     G YLA+ LL  G+EV  +     + +  +               
Sbjct: 1   RNVALI---TGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 57

Query: 122 ----------PFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVA 171
                            I       ++   A+    +     +   D +G     +    
Sbjct: 58  MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAV 117

Query: 172 DWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFS 223
                    +F   S++ +Y    E P  E     P           +  V  +      
Sbjct: 118 KTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 224 NWASFRPQYMIGSGNNKDCEEWFF 247
              +             +      
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKI 201

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 44.4 bits (104), Expect = 5e-06
 Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 30/192 (15%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI---MTVGD--------ENSDKMKKPPFN 124
           ++L+    +GG   IG +  ++LL   +       + V D         N   +   P  
Sbjct: 2   RLLV----TGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRL 57

Query: 125 RFNE--IVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKSS 177
           RF    I  AG         +        +               N+   + +   A  +
Sbjct: 58  RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA 117

Query: 178 GVKQFLFISSAGIYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
           GV + + +S+  +Y   D     E   ++P+           +    Y      +    R
Sbjct: 118 GVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITR 177

Query: 230 PQYMIGSGNNKD 241
                G   + +
Sbjct: 178 CCNNYGPYQHPE 189

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 43.1 bits (100), Expect = 1e-05
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 15/165 (9%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSA 132
           +KK + +V    G     G  L +     GH V    V        ++        +   
Sbjct: 2   QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQ-VHSLKGLIAEELQAIPNVTLFQG 56

Query: 133 GGKTVWGDPAEVGNVVGG--VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI 190
               +  +   +  +  G  + F       G  +   + +AD AK +G  Q    SS   
Sbjct: 57  ---PLLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 113

Query: 191 YKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIG 235
           +      P      V   A    VE Y+ +               
Sbjct: 114 HSLYGPWPA-----VPMWAPKFTVENYVRQLGLPSTFVYAGIYNN 153

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 37/198 (18%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           +VL+    +GG   IG +   +LL +GH+V I+    +N    K+        +      
Sbjct: 2   RVLV----TGGSGYIGSHTCVQLLQNGHDVIIL----DNLCNSKRSVLPVIERLGGKHPT 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV----------------LDNNGKNLDAVRPVADWAKS 176
            V GD    A +  ++     D V                L+    N++    +    ++
Sbjct: 54  FVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA 113

Query: 177 SGVKQFLFISSAGIYKPADEPPHVEGDVV----------KPDAGHVQVEKYISENFSNWA 226
           + VK F+F SSA +Y    + P+VE              K     +  +   ++   + A
Sbjct: 114 ANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 227 SFRPQYMIGSGNNKDCEE 244
             R    +G+  + D  E
Sbjct: 174 LLRYFNPVGAHPSGDMGE 191

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 26/198 (13%), Positives = 48/198 (24%), Gaps = 28/198 (14%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF------ 126
           E  K+ I    +G    I  ++A+ L   GH V       +N    +    + F      
Sbjct: 14  ENLKISI----TGAGGFIASHIARRLKHEGHYVIASDWK-KNEHMTEDMFCDEFHLVDLR 68

Query: 127 --NEIVSAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF 184
                +                   G            N      + + A+ +G+K+F +
Sbjct: 69  VMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 128

Query: 185 ISSAG-------IYKPADEPPHVEGDVVKPD--------AGHVQVEKYISENFSNWASFR 229
            SSA        +          +    +P         A     + Y  +        R
Sbjct: 129 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 188

Query: 230 PQYMIGSGNNKDCEEWFF 247
              + G            
Sbjct: 189 FHNIYGPFGTWKGGREKA 206

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIM 108
           +K  LI    +G     G YL + LLG G+EV  +
Sbjct: 1   RKIALI----TGITGQDGSYLTEFLLGKGYEVHGL 31

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.8 bits (87), Expect = 7e-04
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 36/172 (20%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK 135
           K+LI    +GG   IG  + + ++ +  +  +       +  ++    +  +   S    
Sbjct: 2   KILI----TGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE----SLSDISESNRYN 53

Query: 136 TVWGD---PAEVGNVVGGVTFDVV------------LDNNGK----NLDAVRPVADWAKS 176
               D    AE+  +      D V            +         N+     + + A+ 
Sbjct: 54  FEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113

Query: 177 SGVK---------QFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS 219
                        +F  IS+  +Y     P  VE  V  P           S
Sbjct: 114 YWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSS 165

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 73  EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK 120
           E   VL+    +G +  +  ++ ++LL  G++V            ++K
Sbjct: 10  EGSLVLV----TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Length = 351

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 75  KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAG 133
           K+++++   +GGH   G  +A  L+  G +V  +   D     +        + I  +G
Sbjct: 1   KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISG 59

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 6/69 (8%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN--RFNEIVS 131
            +KVL+    +GG   IG +   ELL +G+   ++             P +  R  E+  
Sbjct: 2   AEKVLV----TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG 57

Query: 132 AGGKTVWGD 140
              +    D
Sbjct: 58  RSVEFEEMD 66

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
           +VL+    + G   IG  LA  L   G +  +  
Sbjct: 2   RVLLSVCGTRGDVEIGVALADRLKALGVQTRMCA 35

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 4/47 (8%)

Query: 74  KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK 120
            K+V +    +G     G +L+  L   G  V   ++       + +
Sbjct: 8   GKRVFV----TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFE 50

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 76  KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT 109
           +VLI    S G       LA  L   G +  +  
Sbjct: 2   RVLITGCGSRGDTEPLVALAARLRELGADARMCL 35

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 6/107 (5%)

Query: 76  KVLIVNTN-----SGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV 130
           KVL++         GG A     +++ L   GHEV + T         +      F E V
Sbjct: 2   KVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEV 61

Query: 131 SAGGKTVWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSS 177
                        +   +GG   D            +R    + ++S
Sbjct: 62  QVKVSYEERGNLRI-YRIGGGLLDSEDVYGPGWDGLIRKAVTFGRAS 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.94
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.92
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.91
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.91
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.91
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.9
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.9
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.9
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.9
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.89
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.88
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.88
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.87
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.86
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.85
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.84
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.83
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.82
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.81
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.81
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.79
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.75
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.75
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.73
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.72
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.69
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.65
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.6
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.59
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.59
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.59
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.59
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.59
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.58
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.57
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.56
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.56
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.56
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.55
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.55
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.54
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.54
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.54
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.53
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.53
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.53
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.53
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.53
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.52
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.51
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.51
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.51
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.51
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.5
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.5
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.5
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.49
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.49
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.48
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.48
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.47
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.46
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.46
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.45
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.45
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.45
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.45
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.44
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.43
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.41
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.41
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.41
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.4
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.4
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.39
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.38
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.36
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.36
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.36
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.34
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.32
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.32
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.32
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.25
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.21
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.21
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.12
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.01
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.98
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.94
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.86
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.84
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.81
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.33
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.95
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.91
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.89
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.89
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.86
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.79
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.72
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.64
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.64
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.64
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.54
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.53
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.52
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.48
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.43
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.41
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.37
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.36
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.34
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.32
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.32
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.29
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.28
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.27
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.23
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.2
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.17
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.15
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.15
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.14
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.14
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.13
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.12
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.1
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.03
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.03
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.02
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.01
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.95
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.92
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.9
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.88
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.87
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.82
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.81
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.79
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.76
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.74
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.73
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.67
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.61
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.61
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.59
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.59
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.59
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.56
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.5
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.46
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.45
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.44
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.42
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.41
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.41
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.4
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.39
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.35
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	96.35
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	96.26
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.25
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.24
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.19
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.18
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.18
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.18
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.1
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.07
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.05
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.03
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.95
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.93
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.88
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.87
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.86
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.85
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.83
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.78
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.74
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	95.74
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.71
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.68
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.68
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.66
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.59
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.57
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.53
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.44
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.4
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.39
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.36
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.35
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	95.3
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.3
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.29
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.22
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.21
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.2
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.15
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.11
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.05
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.01
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.98
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.91
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.87
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.81
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	94.79
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.74
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.71
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.68
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	94.54
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.51
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.36
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.34
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.31
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.31
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.26
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.24
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.2
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	94.09
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.06
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.95
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.92
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.78
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.77
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.67
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	93.59
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.59
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.42
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.36
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.23
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.01
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.9
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.8
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.78
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.73
d1jzta_	243	Hypothetical protein YNL200c (YNU0_YEAST) {Baker's	92.68
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.57
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	92.52
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.49
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.28
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.23
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.17
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.09
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	92.07
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.02
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.92
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	91.84
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.83
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.77
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	91.76
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	91.56
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.45
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.43
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	91.42
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	91.3
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.3
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.28
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.09
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.92
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	90.91
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.67
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.58
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.56
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	90.55
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.55
d1zesa1	121	PhoB receiver domain {Escherichia coli [TaxId: 562	90.54
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	90.14
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.13
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.97
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	89.85
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.77
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.7
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.68
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.44
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	89.32
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.23
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.2
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	88.96
d1xhfa1	121	Aerobic respiration control protein ArcA, N-termin	88.94
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	88.91
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.8
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	88.59
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.42
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.32
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	88.27
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	88.19
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.09
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	87.98
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.9
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.68
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	87.65
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.43
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.31
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	86.78
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.3
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.81
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	85.8
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.68
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.29
d1mb3a_	123	Cell division response regulator DivK {Caulobacter	84.76
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	84.57
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	84.47
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	84.38
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.31
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	84.06
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	84.03
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.84
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.79
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	83.79
d1w25a1	139	Response regulator PleD, receiver domain {Caulobac	83.48
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	83.45
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	83.04
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	82.86
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	82.8
d1zh2a1	119	Transcriptional regulatory protein KdpE, N-termina	82.75
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	82.58
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	82.36
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.21
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	82.18
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	82.12
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.78
d1j9ja_	247	SurE homolog TM1662 {Thermotoga maritima [TaxId: 2	81.62
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.29
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.26
d1va4a_	271	Arylesterase {Pseudomonas fluorescens [TaxId: 294]	80.79
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	80.6
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	80.48
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	80.05

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.7e-27  Score=207.32  Aligned_cols=158  Identities=18%  Similarity=0.134  Sum_probs=124.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-----ccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-----DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-----~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      .|+||||    ||+||||++|+++|+++||+|++++|.....     +.+...     ......+++++.+|   .+++.
T Consensus         1 ~K~vLIT----GatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~   71 (357)
T d1db3a_           1 SKVALIT----GVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-----PHTCNPKFHLHYGDLSDTSNLT   71 (357)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEECC--------------------------CCEEECCCCSSCHHHHH
T ss_pred             CCEEEEe----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh-----hhhcCCCeEEEEeecCCHHHHH
Confidence            3789999    9999999999999999999999999965322     211111     11223456666665   88999


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCC---CEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~---~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      +++++..+|+|+|+|+                .|+.++.+++++|++.++   +|||++||+.+||.....|++|+++..
T Consensus        72 ~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~  151 (357)
T d1db3a_          72 RILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFY  151 (357)
T ss_dssp             HHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCC
T ss_pred             HHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCC
Confidence            9998877899999998                368899999999998664   479999999999988888999999998


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      |. +.|+.+|.+.|.         +++++++||+++|||+...+
T Consensus       152 P~-~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~  194 (357)
T d1db3a_         152 PR-SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGET  194 (357)
T ss_dssp             CC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT
T ss_pred             CC-ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcC
Confidence            86 889999977774         69999999999999976544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1e-24  Score=190.28  Aligned_cols=158  Identities=18%  Similarity=0.140  Sum_probs=125.8

Q ss_pred             cEE-EEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-----ccCCCCCCCcccchhcCCceEEeCC---HHHHH
Q 025587           75 KKV-LIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-----DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        75 ~~V-lVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-----~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~  145 (250)
                      ||| |||    ||+||||++|+++|+++||+|++++|..+..     +++...    .......+++++.+|   ++.+.
T Consensus         1 kKI~LVT----G~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~   72 (347)
T d1t2aa_           1 RNVALIT----GITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN----PQAHIEGNMKLHYGDLTDSTCLV   72 (347)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------CEEEEECCTTCHHHHH
T ss_pred             CCEEEEe----cCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhc----hhhhccCCcEEEEeecCCchhhH
Confidence            567 999    9999999999999999999999999975432     111111    111223467777776   78888


Q ss_pred             hhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCC---CEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          146 NVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV---KQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~---~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      +++.+..+++|+|+++                .|+.++.+++++++++++   ++||++||..|||.....|++|+++..
T Consensus        73 ~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~  152 (347)
T d1t2aa_          73 KIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFY  152 (347)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCC
T ss_pred             HHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCC
Confidence            8888777899999987                367799999999999765   489999999999998888999999998


Q ss_pred             CCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          207 PDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      |. +.|+.+|..+|.         +++++++||+.+|||+....
T Consensus       153 P~-~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~  195 (347)
T d1t2aa_         153 PR-SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGAN  195 (347)
T ss_dssp             CC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT
T ss_pred             CC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCC
Confidence            86 889988877765         68999999999999975543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=9.6e-25  Score=190.69  Aligned_cols=158  Identities=23%  Similarity=0.275  Sum_probs=125.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      ||||||    ||+||||++|+++|+++||+|++++|.....+..    ..........+++++.+|   .+.+.++++..
T Consensus         1 MKiLIt----G~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   72 (338)
T d1udca_           1 MRVLVT----GGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSV----LPVIERLGGKHPTFVEGDIRNEALMTEILHDH   72 (338)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTH----HHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh----HHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc
Confidence            679999    9999999999999999999999998754332210    001112334567888887   88888888866


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE  215 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~  215 (250)
                      ++|+|||+|+                .|+.++.+++++|++.++++||++||..+|+.....+..|.++.......|+.+
T Consensus        73 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~s  152 (338)
T d1udca_          73 AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS  152 (338)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHH
T ss_pred             CCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHH
Confidence            6999999997                478899999999999999999999999999987776666666554334889888


Q ss_pred             HHHHHh----------CCcEEEEecCeeecCCCCC
Q 025587          216 KYISEN----------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       216 k~~~e~----------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |...|.          +++++++||+.+||++...
T Consensus       153 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  187 (338)
T d1udca_         153 KLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSG  187 (338)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTS
T ss_pred             HhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCC
Confidence            866554          4889999999999997654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.3e-24  Score=188.19  Aligned_cols=152  Identities=20%  Similarity=0.221  Sum_probs=114.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +||||||    ||+||||++|+++|+++||+|++++|..... +.+..       ......+.+...|  .+..++.+  
T Consensus         1 kKKIlVt----G~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-------~~~~~~~d~~~~~--~~~~~~~~--   65 (312)
T d2b69a1           1 RKRILIT----GGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH-------WIGHENFELINHD--VVEPLYIE--   65 (312)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG-------GTTCTTEEEEECC--TTSCCCCC--
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH-------hcCCCceEEEehH--HHHHHHcC--
Confidence            5899999    9999999999999999999999998744222 21110       0111123333333  34444444  


Q ss_pred             ccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC-----CCCCCCCh
Q 025587          153 FDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD-----VVKPDAGH  211 (250)
Q Consensus       153 ~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~-----~~~~~~~~  211 (250)
                      +|+|||+|+                .|+.++.+++++|++.++ ++||+||..+|+.....|+.|+.     +..|. +.
T Consensus        66 ~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~-~~  143 (312)
T d2b69a1          66 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR-AC  143 (312)
T ss_dssp             CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT-HH
T ss_pred             CCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCc-cH
Confidence            899999998                367899999999999887 89999999999987766766653     44554 78


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeecCCCCCCc
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIGSGNNKDC  242 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~~  242 (250)
                      |+.+|.+.|.         +++++++||++||||+++.+.
T Consensus       144 Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~  183 (312)
T d2b69a1         144 YDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND  183 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCC
Confidence            9988876665         699999999999999876653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=2.5e-24  Score=187.97  Aligned_cols=162  Identities=23%  Similarity=0.256  Sum_probs=125.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .++|+||||    |||||||++|+++|+++||+|++++|...... .+... ..........+++++.+|   ...+...
T Consensus        14 ~~~k~iLVT----G~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~d~~~~~~~   88 (341)
T d1sb8a_          14 AQPKVWLIT----GVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEV-RSLVSEKQWSNFKFIQGDIRNLDDCNNA   88 (341)
T ss_dssp             HSCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHH-HHHSCHHHHTTEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEe----cCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HHhhhhcccCCeeEEeeccccccccccc
Confidence            456899999    99999999999999999999999997442111 00000 000011223457777777   4444444


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      ..+  ++.|+|+++                .|+.++.+++++|++.++++||++||..+||...+.|++|+++..|. +.
T Consensus        89 ~~~--~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~  165 (341)
T d1sb8a_          89 CAG--VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL-SP  165 (341)
T ss_dssp             HTT--CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC-SH
T ss_pred             ccc--ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC-Cc
Confidence            444  789998887                46889999999999999999999999999999888899999999887 89


Q ss_pred             hHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          212 VQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       212 y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      |+.+|.+.|.         +++++++||+.+||++..++
T Consensus       166 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~  204 (341)
T d1sb8a_         166 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPN  204 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCC
T ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCC
Confidence            9999877775         58999999999999987654

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.2e-24  Score=185.98  Aligned_cols=142  Identities=20%  Similarity=0.318  Sum_probs=117.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      +||||||    |||||||++|+++|+++||.|+++++..+                      ....|.+.+.+++....+
T Consensus         2 kkkIlIT----G~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~~~~   55 (315)
T d1e6ua_           2 KQRVFIA----GHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFASERI   55 (315)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEE----cCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhhcCC
Confidence            5799999    99999999999999999999987765431                      112377888888877779


Q ss_pred             cEEEeCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCC----CCCChh
Q 025587          154 DVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVK----PDAGHV  212 (250)
Q Consensus       154 d~Vi~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~----~~~~~y  212 (250)
                      |.|+|+++                 .|+.++.+++++|++.++++|||+||.++|+.....|++|+.+..    +..+.|
T Consensus        56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y  135 (315)
T d1e6ua_          56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY  135 (315)
T ss_dssp             SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred             CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHH
Confidence            99999986                 378899999999999999999999999999998877888876543    223569


Q ss_pred             HHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          213 QVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       213 ~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      +.+|...|.         +++++++||++||||+++.+
T Consensus       136 ~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~  173 (315)
T d1e6ua_         136 AIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFH  173 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCC
Confidence            988876664         79999999999999987643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-23  Score=171.70  Aligned_cols=145  Identities=21%  Similarity=0.233  Sum_probs=116.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|||+||    ||||+||++++++|+++||+|++++|++++....           ...+++++.+|   .+++.+++++
T Consensus         3 ~kkIlV~----GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~~gD~~d~~~l~~al~~   67 (205)
T d1hdoa_           3 VKKIAIF----GATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVAG   67 (205)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHTT
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----------cccccccccccccchhhHHHHhcC
Confidence            5789999    9999999999999999999999999988665432           23467788887   8888899988


Q ss_pred             CcccEEEeCCC---------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHh
Q 025587          151 VTFDVVLDNNG---------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISEN  221 (250)
Q Consensus       151 ~~~d~Vi~~ag---------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~  221 (250)
                        +|+||+++|         .+.++++++++++++++++|||++||.++|.+....+.....   ....+..+|+++.+.
T Consensus        68 --~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~---~~~~~~~~e~~l~~~  142 (205)
T d1hdoa_          68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQA---VTDDHIRMHKVLRES  142 (205)
T ss_dssp             --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHH---HHHHHHHHHHHHHHT
T ss_pred             --CCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccc---cchHHHHHHHHHHhc
Confidence              699999998         356789999999999999999999999998775543211100   011344577888888


Q ss_pred             CCcEEEEecCeeecCCC
Q 025587          222 FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       222 ~~~~~ilRp~~i~G~~~  238 (250)
                      +++|++|||+.+++...
T Consensus       143 ~~~~tiirp~~~~~~~~  159 (205)
T d1hdoa_         143 GLKYVAVMPPHIGDQPL  159 (205)
T ss_dssp             CSEEEEECCSEEECCCC
T ss_pred             CCceEEEecceecCCCC
Confidence            99999999999987543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=2.4e-23  Score=182.21  Aligned_cols=156  Identities=24%  Similarity=0.256  Sum_probs=124.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |.||||    ||+||||++|+++|+++||+|+++++..... +..     .........+++++.+|   .+++.+++..
T Consensus         2 K~ILVT----GatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~-----~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~   72 (347)
T d1z45a2           2 KIVLVT----GGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV-----ARLEVLTKHHIPFYEVDLCDRKGLEKVFKE   72 (347)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHH-----HHHHHHHTSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHH-----HhHHhhcccCCeEEEeecCCHHHHHHHHhc
Confidence            579999    9999999999999999999999998643221 111     01122344567777776   7888888887


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCC----CCCccCCCCCCCCCC
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPAD----EPPHVEGDVVKPDAG  210 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~----~~~~~e~~~~~~~~~  210 (250)
                      .++|+|||+|+                .|+.++.+++++|++.++++||++||..+|+...    ..+++|+.+..|. +
T Consensus        73 ~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~-~  151 (347)
T d1z45a2          73 YKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-N  151 (347)
T ss_dssp             SCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC-S
T ss_pred             cCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC-C
Confidence            77999999998                4688999999999999999999999999999743    3457777777775 7


Q ss_pred             hhHHHHHHHHh-----------CCcEEEEecCeeecCCCCC
Q 025587          211 HVQVEKYISEN-----------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       211 ~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .|+.+|.+.|.           +++++++||+.+||++...
T Consensus       152 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~  192 (347)
T d1z45a2         152 PYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSG  192 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTS
T ss_pred             hhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCC
Confidence            89988877664           4789999999999986543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=5.5e-23  Score=180.70  Aligned_cols=151  Identities=21%  Similarity=0.161  Sum_probs=118.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +.||||||    ||+||||++|+++|+++||+|++++|.......           ......++..+|   .+.+.++++
T Consensus        14 ~nMKILVT----GgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~   78 (363)
T d2c5aa1          14 ENLKISIT----GAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCDEFHLVDLRVMENCLKVTE   78 (363)
T ss_dssp             SCCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-----------GGGTCSEEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-----------hhcccCcEEEeechhHHHHHHHhh
Confidence            57899999    999999999999999999999999876532210           011234455556   667777776


Q ss_pred             CCcccEEEeCCC-----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC-------CCCC
Q 025587          150 GVTFDVVLDNNG-----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE-------GDVV  205 (250)
Q Consensus       150 ~~~~d~Vi~~ag-----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e-------~~~~  205 (250)
                      +  +|+|||+++                 .|+.++.++++++++.++++||++||..+|+.....+..|       ..+.
T Consensus        79 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~  156 (363)
T d2c5aa1          79 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPA  156 (363)
T ss_dssp             T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSB
T ss_pred             c--CCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcC
Confidence            6  899999997                 3688999999999999999999999999999765544433       3445


Q ss_pred             CCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          206 KPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       206 ~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      .|. +.|+.+|..+|.         +++++++||+.+||+++...
T Consensus       157 ~p~-~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~  200 (363)
T d2c5aa1         157 EPQ-DAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWK  200 (363)
T ss_dssp             CCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCS
T ss_pred             CCC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccc
Confidence            554 789988876664         68999999999999987543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.90  E-value=1.1e-22  Score=176.18  Aligned_cols=154  Identities=16%  Similarity=0.219  Sum_probs=120.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE------EEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI------MTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEV  144 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~------l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l  144 (250)
                      ||||||    ||+||||++|+++|+++||+|..      +++.......      ..+.. ....+++++.+|   ...+
T Consensus         1 MkIlIt----G~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~   70 (322)
T d1r6da_           1 MRLLVT----GGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR------ANLAPVDADPRLRFVHGDIRDAGLL   70 (322)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG------GGGGGGTTCTTEEEEECCTTCHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH------hHhhhhhcCCCeEEEEeccccchhh
Confidence            689999    99999999999999999986544      3332211110      00011 123457778887   4555


Q ss_pred             HhhhcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          145 GNVVGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      ......  +|.|+|+|+                .|+.++.+++++|++.++++||++||..+|+...+.+++|+++..|.
T Consensus        71 ~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~  148 (322)
T d1r6da_          71 ARELRG--VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (322)
T ss_dssp             HHHTTT--CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             hccccc--cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC
Confidence            554444  899999997                36889999999999999999999999999999988899999999886


Q ss_pred             CChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          209 AGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       209 ~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                       +.|+.+|...|.         +++++++||+.||||++..+
T Consensus       149 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~  189 (322)
T d1r6da_         149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE  189 (322)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC
Confidence             889988866654         69999999999999987653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.8e-22  Score=176.21  Aligned_cols=164  Identities=21%  Similarity=0.191  Sum_probs=125.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC--CCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP--PFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~--~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      |.||||||    ||+||||++|+++|+++||+|++++|...........  ...++......++.++.+|   .+.+.++
T Consensus         1 M~kKILIT----G~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~   76 (346)
T d1ek6a_           1 MAEKVLVT----GGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRL   76 (346)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCeEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccc
Confidence            56899999    9999999999999999999999998743322211110  0011222345567788777   7788888


Q ss_pred             hcCCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCCh
Q 025587          148 VGGVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       148 l~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~  211 (250)
                      +.+..+++++|+|+                .|+.++.++++++++.++++||++||..+|+.....+..+........+.
T Consensus        77 ~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1ek6a_          77 FKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP  156 (346)
T ss_dssp             HHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred             ccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCCh
Confidence            87777899999998                36889999999999999999999999999998766555444444444578


Q ss_pred             hHHHHHHHHh----------CCcEEEEecCeeecCCCCC
Q 025587          212 VQVEKYISEN----------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       212 y~~~k~~~e~----------~~~~~ilRp~~i~G~~~~~  240 (250)
                      |+..|.+.|.          +++++++||+.+||++...
T Consensus       157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  195 (346)
T d1ek6a_         157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASG  195 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCC
Confidence            9988866553          6889999999999997543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.89  E-value=7e-23  Score=180.73  Aligned_cols=157  Identities=16%  Similarity=0.159  Sum_probs=116.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+||||++|+++|+++||+|++..+........     ..+.. ....+++++.+|   ++.+.+++++
T Consensus         1 MkILIt----G~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   71 (361)
T d1kewa_           1 MKILIT----GGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-----ESLSDISESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             CEEEEE----STTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-----GGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH-----HHHHhhhhcCCcEEEEccCCCHHHHHHHHHh
Confidence            589999    9999999999999999999865544332111110     00111 123467777777   7888888887


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCC---------CCEEEEEcCcccccCCCCCCc------
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSG---------VKQFLFISSAGIYKPADEPPH------  199 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~---------~~~~v~iSS~~vy~~~~~~~~------  199 (250)
                      ..+|+|||+|+                .|+.++.+++++|++.+         +++||++||..+||.....+.      
T Consensus        72 ~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (361)
T d1kewa_          72 YQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccC
Confidence            77999999998                35778999999998854         459999999999997543322      


Q ss_pred             ----cCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          200 ----VEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       200 ----~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                          .|.++..|. +.|+.+|.+.|.         +++++++||+.||||++..+
T Consensus       152 ~~~~~e~~~~~p~-s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~  205 (361)
T d1kewa_         152 LPLFTETTAYAPS-SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE  205 (361)
T ss_dssp             CCCBCTTSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT
T ss_pred             CCCcccCCCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC
Confidence                344445554 889988877765         69999999999999987653

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=6.2e-22  Score=171.76  Aligned_cols=161  Identities=16%  Similarity=0.134  Sum_probs=120.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc--cCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD--KMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~--~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+||||++|+++|+++||+|++++|..+...  .+... ...........++++.+|   .+.+.+.+
T Consensus         1 ~k~~LVT----GatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Di~~~~~~~~~~   75 (339)
T d1n7ha_           1 RKIALIT----GITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHI-YIDPHNVNKALMKLHYADLTDASSLRRWI   75 (339)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTT-C--------CCEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhh-hhhhhhccccceEEEEccccCHHHHHHHH
Confidence            4899999    99999999999999999999999999654211  11110 011112233456677777   67778877


Q ss_pred             cCCcccEEEeCCC----------------cCHHhHHHHHHHHHhC-----CCCEEEEEcCcccccCCCCCCccCCCCCCC
Q 025587          149 GGVTFDVVLDNNG----------------KNLDAVRPVADWAKSS-----GVKQFLFISSAGIYKPADEPPHVEGDVVKP  207 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~-----~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~  207 (250)
                      +...+|+|||+|+                .|+.++.++++++++.     ...++++.||..+|+... .+++|+++..|
T Consensus        76 ~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p  154 (339)
T d1n7ha_          76 DVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHP  154 (339)
T ss_dssp             HHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCC
T ss_pred             hhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCC
Confidence            7767999999998                2566788999988763     345788888888877654 46899999888


Q ss_pred             CCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          208 DAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       208 ~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      . +.|+.+|...|.         +++++++||+.||||+...+
T Consensus       155 ~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~  196 (339)
T d1n7ha_         155 R-SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGEN  196 (339)
T ss_dssp             C-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT
T ss_pred             c-chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCC
Confidence            6 999998877774         69999999999999976543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.88  E-value=3.7e-22  Score=172.11  Aligned_cols=156  Identities=17%  Similarity=0.086  Sum_probs=124.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      |+||||    ||+||||++|+++|+++||+|++++|.......      .++..+ ...+++++.+|   .+.+.+.+..
T Consensus         1 k~vLIt----G~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~------~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   70 (321)
T d1rpna_           1 RSALVT----GITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR------WRLRELGIEGDIQYEDGDMADACSVQRAVIK   70 (321)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC------HHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH------HHHHHhcccCCcEEEEccccChHHhhhhhcc
Confidence            689999    999999999999999999999999997643211      111111 23457777777   7777777776


Q ss_pred             CcccEEEeCCC----------------cCHHhHHHHHHHHHhCCC-CEEEEEcCcccccCCCCCCccCCCCCCCCCChhH
Q 025587          151 VTFDVVLDNNG----------------KNLDAVRPVADWAKSSGV-KQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQ  213 (250)
Q Consensus       151 ~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~  213 (250)
                      ..+++++|+++                .|+.++.+++++|++.+. ++|++.||..+|+.....+.+|+++..+. +.|+
T Consensus        71 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~-~~Y~  149 (321)
T d1rpna_          71 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR-SPYG  149 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SHHH
T ss_pred             ccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc-ChhH
Confidence            66789999987                367899999999999774 47888999999988888788999988886 8899


Q ss_pred             HHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          214 VEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       214 ~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      ..|.+.|.         +++++++||+++|||....+
T Consensus       150 ~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~  186 (321)
T d1rpna_         150 VAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIE  186 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCcccc
Confidence            88866654         68999999999999975443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.8e-22  Score=165.63  Aligned_cols=147  Identities=26%  Similarity=0.295  Sum_probs=111.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    |||||||++|+++|+++|  ++|++++|++.....           .....+..+.+|   .+++.++
T Consensus        13 ~~k~IlIt----GaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----------~~~~~i~~~~~D~~~~~~~~~~   77 (232)
T d2bkaa1          13 QNKSVFIL----GASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------EAYKNVNQEVVDFEKLDDYASA   77 (232)
T ss_dssp             TCCEEEEE----CTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------GGGGGCEEEECCGGGGGGGGGG
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----------cccceeeeeeeccccccccccc
Confidence            45789999    999999999999999999  489999998744321           122356677777   4556666


Q ss_pred             hcCCcccEEEeCCC-------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHH
Q 025587          148 VGGVTFDVVLDNNG-------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQV  214 (250)
Q Consensus       148 l~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~  214 (250)
                      +++  +|+|||++|             .++.++.+++++|++.++++||++|+.++|......         ...+++.+
T Consensus        78 ~~~--~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~---------Y~~~K~~~  146 (232)
T d2bkaa1          78 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFL---------YLQVKGEV  146 (232)
T ss_dssp             GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSH---------HHHHHHHH
T ss_pred             ccc--cccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccch---------hHHHHHHh
Confidence            666  799999998             356789999999999999999999998877543211         01244556


Q ss_pred             HHHHHHhCCc-EEEEecCeeecCCCCCCcccc
Q 025587          215 EKYISENFSN-WASFRPQYMIGSGNNKDCEEW  245 (250)
Q Consensus       215 ~k~~~e~~~~-~~ilRp~~i~G~~~~~~~~~~  245 (250)
                      |+.+.+.+++ ++|+||+.+||+++.....+|
T Consensus       147 E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~  178 (232)
T d2bkaa1         147 EAKVEELKFDRYSVFRPGVLLCDRQESRPGEW  178 (232)
T ss_dssp             HHHHHTTCCSEEEEEECCEEECTTGGGSHHHH
T ss_pred             hhccccccccceEEecCceeecCCCcCcHHHH
Confidence            6677676775 999999999999876544433

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.86  E-value=3.5e-21  Score=168.20  Aligned_cols=154  Identities=14%  Similarity=0.163  Sum_probs=116.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +|+||||    |||||||++|+++|+++||+|.++.++.-. ...     ..........+++++.+|   .+.+.+++.
T Consensus         2 ~mkILVT----GgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~   72 (346)
T d1oc2a_           2 FKNIIVT----GGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-----KANLEAILGDRVELVVGDIADAELVDKLAA   72 (346)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-----GGGTGGGCSSSEEEEECCTTCHHHHHHHHT
T ss_pred             cCEEEEe----CCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc-----HHHHHHhhcCCeEEEEccCCCHHHHHHHHh
Confidence            6899999    999999999999999999987776654211 000     011122344577788886   788888887


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC------------CCCCccC
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA------------DEPPHVE  201 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~------------~~~~~~e  201 (250)
                      +  +|.|+|+|+                .|+.++.+++++++..+. ++|++||..+|+..            ......|
T Consensus        73 ~--~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e  149 (346)
T d1oc2a_          73 K--ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA  149 (346)
T ss_dssp             T--CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred             h--hhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCccccccc
Confidence            7  688999987                367899999999999875 89999999999852            1224556


Q ss_pred             CCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          202 GDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      .++..|. +.|+.+|...|.         +++++++||+.||||+...
T Consensus       150 ~~~~~p~-s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~  196 (346)
T d1oc2a_         150 ETNYNPS-SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI  196 (346)
T ss_dssp             TSCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT
T ss_pred             CCCCCCC-CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc
Confidence            6666665 789988866663         6999999999999997654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=1.9e-21  Score=172.54  Aligned_cols=161  Identities=16%  Similarity=0.146  Sum_probs=116.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC----------CCccccCCCC--CCCcccchhcCCceEEeCC-
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG----------DENSDKMKKP--PFNRFNEIVSAGGKTVWGD-  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~----------~~~~~~~~~~--~~~~~~~~~~~~v~~v~~D-  140 (250)
                      +||||||    ||+||||++|+++|+++||+|++++.-          .+........  ...++......+++++.+| 
T Consensus         1 g~kILVT----GatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl   76 (393)
T d1i24a_           1 GSRVMVI----GGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   76 (393)
T ss_dssp             -CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccC
Confidence            4899999    999999999999999999999999731          1111110000  0011122334678888887 


Q ss_pred             --HHHHHhhhcCCcccEEEeCCC-------------------cCHHhHHHHHHHHHhCCCC-EEEEEcCcccccCCCCCC
Q 025587          141 --PAEVGNVVGGVTFDVVLDNNG-------------------KNLDAVRPVADWAKSSGVK-QFLFISSAGIYKPADEPP  198 (250)
Q Consensus       141 --~~~l~~~l~~~~~d~Vi~~ag-------------------~~~~~~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~~  198 (250)
                        .+.+.+++++.++|+|||+|+                   .|+.++.+++++|++.+.+ ++++.||..+|+.... +
T Consensus        77 ~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~  155 (393)
T d1i24a_          77 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-D  155 (393)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-C
T ss_pred             CCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-c
Confidence              788899998877999999997                   2688999999999997654 6788888888876432 2


Q ss_pred             ccCC--------------CCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCC
Q 025587          199 HVEG--------------DVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       199 ~~e~--------------~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~  240 (250)
                      ..|.              .+..|. +.|+.+|.++|.         +++++++||+.+|||+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~-~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~  219 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQAS-SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE  219 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCC-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTT
T ss_pred             cccccccccccccccccccccccc-cHHHHHhhhhcccccccccccceeeeecccccccCCCccc
Confidence            2221              123443 789999887765         6999999999999998654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.85  E-value=2.9e-20  Score=164.40  Aligned_cols=167  Identities=20%  Similarity=0.183  Sum_probs=123.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCC---CccccCCC---------CCCCcccchhcCCceEEeCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGD---ENSDKMKK---------PPFNRFNEIVSAGGKTVWGD  140 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~---~~~~~~~~---------~~~~~~~~~~~~~v~~v~~D  140 (250)
                      .||||||    ||+||||++|+++|++ .||+|+++++-.   ........         .............+.++.+|
T Consensus         2 ~MKVLIT----G~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   77 (383)
T d1gy8a_           2 HMRVLVC----GGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGD   77 (383)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESC
T ss_pred             cCEEEEe----CCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECc
Confidence            3699999    9999999999999996 689999998521   11111000         00000011123456677777


Q ss_pred             ---HHHHHhhhcCC-cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCC----
Q 025587          141 ---PAEVGNVVGGV-TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADE----  196 (250)
Q Consensus       141 ---~~~l~~~l~~~-~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~----  196 (250)
                         .+.+.++++.. .+|+|||+|+                .|+.++.++++++++.++++++++++..+|+....    
T Consensus        78 i~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  157 (383)
T d1gy8a_          78 VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVS  157 (383)
T ss_dssp             TTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC----
T ss_pred             ccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccc
Confidence               67788888643 4799999998                36889999999999999999999999999986433    


Q ss_pred             ---CCccCCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCCcccc
Q 025587          197 ---PPHVEGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKDCEEW  245 (250)
Q Consensus       197 ---~~~~e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~~~~~  245 (250)
                         .++.|+++..|. +.|+.+|...|.         +++++++||+.+|||++..+...+
T Consensus       158 ~~~~~~~e~~~~~p~-~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~  217 (383)
T d1gy8a_         158 TNAEPIDINAKKSPE-SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEH  217 (383)
T ss_dssp             -CCCCBCTTSCCBCS-SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCC
T ss_pred             ccccccccccCCCCC-CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcccccccc
Confidence               346666777765 889988876654         699999999999999988765544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=4.7e-21  Score=156.38  Aligned_cols=144  Identities=19%  Similarity=0.199  Sum_probs=102.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +|+||||    |||||||++|+++|+++|+  +|++++|++....               ..+..+..|..++.+.+.. 
T Consensus         2 ~KkIlIt----GatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~~~~~~~d~~~~~~~~~~-   61 (212)
T d2a35a1           2 PKRVLLA----GATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PRLDNPVGPLAELLPQLDG-   61 (212)
T ss_dssp             CCEEEEE----CTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TTEECCBSCHHHHGGGCCS-
T ss_pred             CCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------ccccccccchhhhhhcccc-
Confidence            5899999    9999999999999999998  5666666542110               1223334465555555444 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHH
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                      .+|+||+++|              .++.++.+++++|++.++++||++|+.++|+.....         ...+++..|+.
T Consensus        62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~---------y~~~K~~~E~~  132 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIF---------YNRVKGELEQA  132 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSH---------HHHHHHHHHHH
T ss_pred             chheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccccccc---------hhHHHHHHhhh
Confidence            3899999998              356789999999999999999999999887543211         01134445555


Q ss_pred             HHHhCC-cEEEEecCeeecCCCCCCccccc
Q 025587          218 ISENFS-NWASFRPQYMIGSGNNKDCEEWF  246 (250)
Q Consensus       218 ~~e~~~-~~~ilRp~~i~G~~~~~~~~~~~  246 (250)
                      +.+.++ +|+|+||+.|||+.+......++
T Consensus       133 l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~  162 (212)
T d2a35a1         133 LQEQGWPQLTIARPSLLFGPREEFRLAEIL  162 (212)
T ss_dssp             HTTSCCSEEEEEECCSEESTTSCEEGGGGT
T ss_pred             ccccccccceeeCCcceeCCcccccHHHHH
Confidence            555566 59999999999998765444443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=7.1e-20  Score=159.18  Aligned_cols=150  Identities=21%  Similarity=0.208  Sum_probs=115.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHh-hhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN-VVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~-~l~  149 (250)
                      ||||||    ||+||||++|+++|+++| ++|+++++..+....+.          ...+++++.+|   .+++.+ +++
T Consensus         1 MKILIT----G~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----------~~~~~~~i~~Di~~~~~~~~~~~~   66 (342)
T d2blla1           1 MRVLIL----GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------NHPHFHFVEGDISIHSEWIEYHVK   66 (342)
T ss_dssp             CEEEEE----TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------TCTTEEEEECCTTTCSHHHHHHHH
T ss_pred             CEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----------cCCCeEEEECccCChHHHHHHHHh
Confidence            589999    999999999999999999 58999998765444322          23467888887   334444 444


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC------CC
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV------KP  207 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~------~~  207 (250)
                      +  +|+|||+|+                .|+.++.++++++.+.+. +++++||..+|+........|....      ..
T Consensus        67 ~--~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (342)
T d2blla1          67 K--CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  143 (342)
T ss_dssp             H--CSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTC
T ss_pred             C--CCccccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCC
Confidence            3  899999998                368899999999999887 6678999999998766555543321      12


Q ss_pred             CCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          208 DAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       208 ~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      ....|+.+|.+.|.         +++++++||+.+||++....
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~  186 (342)
T d2blla1         144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNL  186 (342)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCT
T ss_pred             CcchhhhcccchhhhhhhhhcccCceeEEeecccccccccccc
Confidence            23779988877765         69999999999999976543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.82  E-value=6.7e-20  Score=159.77  Aligned_cols=156  Identities=18%  Similarity=0.150  Sum_probs=116.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++||||||    ||+||||++|+++|+++||+|++++|+..+...+.+.      .....+++.+.+|   ++.+.++++
T Consensus         7 ~~KkILVT----G~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~------~~~~~~i~~~~~Dl~d~~~l~~~~~   76 (356)
T d1rkxa_           7 QGKRVFVT----GHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFET------ARVADGMQSEIGDIRDQNKLLESIR   76 (356)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHH------TTTTTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhh------hhcccCCeEEEeeccChHhhhhhhh
Confidence            46899999    9999999999999999999999999987654432110      0113467788886   788888888


Q ss_pred             CCcccEEEeCCC----------------cCHHhHHHHHHHHHhCC-CCEEEEEcCcccccCC-CCCCccCCCCCCCCCCh
Q 025587          150 GVTFDVVLDNNG----------------KNLDAVRPVADWAKSSG-VKQFLFISSAGIYKPA-DEPPHVEGDVVKPDAGH  211 (250)
Q Consensus       150 ~~~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~-~~~~v~iSS~~vy~~~-~~~~~~e~~~~~~~~~~  211 (250)
                      ...+|+|+|+++                .|+.++.++++++++.+ .+.+++.|+..+|... ...+..|+.+..|. ..
T Consensus        77 ~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~-~~  155 (356)
T d1rkxa_          77 EFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY-DP  155 (356)
T ss_dssp             HHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS-SH
T ss_pred             hchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC-Cc
Confidence            777899999998                36788999999999865 4455555555555443 34456666666665 77


Q ss_pred             hHHHHHHHHh------------------CCcEEEEecCeeecCCCC
Q 025587          212 VQVEKYISEN------------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       212 y~~~k~~~e~------------------~~~~~ilRp~~i~G~~~~  239 (250)
                      |+..|...|.                  ++.++++||+.+|||++.
T Consensus       156 y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~  201 (356)
T d1rkxa_         156 YSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW  201 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC
T ss_pred             cccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcc
Confidence            8877754432                  478999999999999864

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.81  E-value=1.2e-19  Score=152.80  Aligned_cols=136  Identities=24%  Similarity=0.302  Sum_probs=110.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      ||||||    ||+||||++|+++|.++||+|++++|..-                       +..|.+.+.+++++..+|
T Consensus         2 MKIlIt----GasGfiG~~l~~~L~~~g~~Vi~~~r~~~-----------------------D~~d~~~~~~~l~~~~~d   54 (281)
T d1vl0a_           2 MKILIT----GANGQLGREIQKQLKGKNVEVIPTDVQDL-----------------------DITNVLAVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEEE----STTSHHHHHHHHHHTTSSEEEEEECTTTC-----------------------CTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEEEeechhc-----------------------cCCCHHHHHHHHHHcCCC
Confidence            689999    99999999999999999999999988641                       123788889999877799


Q ss_pred             EEEeCCCc----------------CHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHH---
Q 025587          155 VVLDNNGK----------------NLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVE---  215 (250)
Q Consensus       155 ~Vi~~ag~----------------~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~---  215 (250)
                      +|||+++.                |+.....++++++..+ ..+++.|+..+|+.....+..|.++..+. ..|+.+   
T Consensus        55 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~-~~~~~~k~~  132 (281)
T d1vl0a_          55 VVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQ-SAYGKTKLE  132 (281)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCC-SHHHHHHHH
T ss_pred             EEEeeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccch-hhhhhhhhH
Confidence            99999982                3445666777776644 58899999999999888899999988776 566644   


Q ss_pred             --HHHHHhCCcEEEEecCeeecCCCC
Q 025587          216 --KYISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       216 --k~~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                        +++.+.+.+++++||+.+||++.+
T Consensus       133 ~e~~~~~~~~~~~i~R~~~vyG~~~~  158 (281)
T d1vl0a_         133 GENFVKALNPKYYIVRTAWLYGDGNN  158 (281)
T ss_dssp             HHHHHHHHCSSEEEEEECSEESSSSC
T ss_pred             HHHHHHHhCCCccccceeEEeCCCcc
Confidence              455555899999999999999754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.81  E-value=7.2e-21  Score=166.17  Aligned_cols=158  Identities=18%  Similarity=0.138  Sum_probs=111.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~l  148 (250)
                      .+|+||||    ||+||||++|+++|+++||+|+++.|+.++..++.+.    +... .......+.+|   .+.+.+++
T Consensus        10 ~gk~VlVT----G~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          10 EGSLVLVT----GANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR----WDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CcCEEEEE----CCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHh----hhccccccccEEEeccccchhhhhhhc
Confidence            46899999    9999999999999999999999999976544332110    0000 11122344455   67777888


Q ss_pred             cCCcccEEEeCCC-------------cCHHhHHHHHHHHHhC-CCCEEEEEcCcccccCCC----CCCcc----------
Q 025587          149 GGVTFDVVLDNNG-------------KNLDAVRPVADWAKSS-GVKQFLFISSAGIYKPAD----EPPHV----------  200 (250)
Q Consensus       149 ~~~~~d~Vi~~ag-------------~~~~~~~~ll~~~~~~-~~~~~v~iSS~~vy~~~~----~~~~~----------  200 (250)
                      .+  +|.|+|+++             .|+.++.+++++|++. ++++|||+||..++....    .....          
T Consensus        82 ~~--~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~  159 (342)
T d1y1pa1          82 KG--AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TT--CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             cc--chhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccc
Confidence            77  799999998             2788999999999885 699999999986543211    11112          


Q ss_pred             ------CCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCCCCC
Q 025587          201 ------EGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       201 ------e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~~~~  241 (250)
                            |..+..+. +.|+.+|...|.           +++++++||+.+|||...+.
T Consensus       160 ~~~~~~e~~~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~  216 (342)
T d1y1pa1         160 KAKTLPESDPQKSL-WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE  216 (342)
T ss_dssp             HHHHSCTTSTTHHH-HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT
T ss_pred             ccccccccCCCCCc-CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCcc
Confidence                  22233332 668988876664           37789999999999975443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.79  E-value=4.4e-19  Score=152.79  Aligned_cols=156  Identities=17%  Similarity=0.137  Sum_probs=111.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhhcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |||||    ||+||||++|+++|+++||+|+++++-......      .++.. ....+++++.+|   .+++.+++++.
T Consensus         2 KILVT----GatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~------~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~   71 (338)
T d1orra_           2 KLLIT----GGCGFLGSNLASFALSQGIDLIVFDNLSRKGAT------DNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY   71 (338)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHH------HHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             EEEEE----CCCcHHHHHHHHHHHHCcCEEEEEECCCcccch------hHHHHhhccCCcEEEEcccCCHHHHHHHHHhc
Confidence            79999    999999999999999999999999863321110      00000 123467788887   78889999887


Q ss_pred             cccEEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccC-CCCCCcc--------------
Q 025587          152 TFDVVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKP-ADEPPHV--------------  200 (250)
Q Consensus       152 ~~d~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~-~~~~~~~--------------  200 (250)
                      ++|+|||+|+                .|+.++.++++++++.+++++|+.||...+.. ....+..              
T Consensus        72 ~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (338)
T d1orra_          72 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  151 (338)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccC
Confidence            7899999998                46889999999999988887777776655444 3332221              


Q ss_pred             --CCCCCCCCCChhHHHHHHHHh---------CCcEEEEecCeeecCCCCCCc
Q 025587          201 --EGDVVKPDAGHVQVEKYISEN---------FSNWASFRPQYMIGSGNNKDC  242 (250)
Q Consensus       201 --e~~~~~~~~~~y~~~k~~~e~---------~~~~~ilRp~~i~G~~~~~~~  242 (250)
                        +..+..+. +.|+..|...|.         ++...++|+..+||+......
T Consensus       152 ~~~~~~~~~~-~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (338)
T d1orra_         152 YDESTQLDFH-SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY  203 (338)
T ss_dssp             BCTTSCCCCC-HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT
T ss_pred             cccCCccccc-cccccccchhhhhhhhhhhccCcccccccccceeeccccccc
Confidence              22233333 678777765543         688999999999988765443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.75  E-value=3e-18  Score=144.83  Aligned_cols=137  Identities=19%  Similarity=0.305  Sum_probs=106.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      ||||||    ||+||||++|+++|+++|+.|. +++.....                   ..+..|.+.+.+++++.++|
T Consensus         1 MKILIt----G~tGfiG~~l~~~L~~~g~~v~-~~~~~~~~-------------------~~Dl~~~~~~~~~i~~~~~D   56 (298)
T d1n2sa_           1 MNILLF----GKTGQVGWELQRSLAPVGNLIA-LDVHSKEF-------------------CGDFSNPKGVAETVRKLRPD   56 (298)
T ss_dssp             CEEEEE----CTTSHHHHHHHHHTTTTSEEEE-ECTTCSSS-------------------CCCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHhCCCEEE-EECCCccc-------------------cCcCCCHHHHHHHHHHcCCC
Confidence            689999    9999999999999999987554 44443111                   11123788899999877799


Q ss_pred             EEEeCCC----------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHH
Q 025587          155 VVLDNNG----------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI  218 (250)
Q Consensus       155 ~Vi~~ag----------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~  218 (250)
                      +|||+||                .|+.++.++++++++.+. +++++||..+|+.....|+.|.++..|. +.|+..|..
T Consensus        57 ~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~-~~y~~~k~~  134 (298)
T d1n2sa_          57 VIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL-NVYGKTKLA  134 (298)
T ss_dssp             EEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS-SHHHHHHHH
T ss_pred             EEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCC-chHhhhhhh
Confidence            9999998                257789999999988775 7999999999999888899999998876 777766655


Q ss_pred             HHh-----CCcEEEEecCeeecCC
Q 025587          219 SEN-----FSNWASFRPQYMIGSG  237 (250)
Q Consensus       219 ~e~-----~~~~~ilRp~~i~G~~  237 (250)
                      .|.     ...+.++|++..|+..
T Consensus       135 ~e~~~~~~~~~~~~~~~~~~~~~~  158 (298)
T d1n2sa_         135 GEKALQDNCPKHLIFRTSWVYAGK  158 (298)
T ss_dssp             HHHHHHHHCSSEEEEEECSEECSS
T ss_pred             hhhhHHhhhcccccccccceeecc
Confidence            543     5667777777776553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=3.2e-18  Score=139.64  Aligned_cols=147  Identities=16%  Similarity=0.207  Sum_probs=106.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCe--EEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHE--VTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~--V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .+++||||    ||+||||++++++|+++||+  |+.+.|++++...+            ..+++++.+|   .+.+.++
T Consensus         2 ~~~tVlVt----GatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~   65 (252)
T d2q46a1           2 NLPTVLVT----GASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------GGEADVFIGDITDADSINPA   65 (252)
T ss_dssp             SCCEEEEE----STTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------TCCTTEEECCTTSHHHHHHH
T ss_pred             CCCEEEEE----CCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc------------cCCcEEEEeeeccccccccc
Confidence            46899999    99999999999999999976  55567766443321            2355666666   8888888


Q ss_pred             hcCCcccEEEeCCC-----------------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          148 VGGVTFDVVLDNNG-----------------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       148 l~~~~~d~Vi~~ag-----------------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +++  +|+|||+++                             +++.+++++++.+...+.+++.+.++...+.......
T Consensus        66 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  143 (252)
T d2q46a1          66 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLN  143 (252)
T ss_dssp             HTT--CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGG
T ss_pred             ccc--ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccc
Confidence            887  799999987                             2467899999999998999999999877665432211


Q ss_pred             ccCCCCCCCCCChhHHHHHHHHhCCcEEEEecCeeecCCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYISENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~e~~~~~~ilRp~~i~G~~~~  239 (250)
                        ...........+..+++..+.+++++++||+.+||+...
T Consensus       144 --~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  182 (252)
T d2q46a1         144 --KLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGG  182 (252)
T ss_dssp             --GGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTT
T ss_pred             --cccccchhhhhhhhhhhhhcccccceeecceEEECCCcc
Confidence              100001001223344455566899999999999999754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.73  E-value=4.4e-18  Score=144.48  Aligned_cols=152  Identities=18%  Similarity=0.204  Sum_probs=111.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      +++|||||    |||||||++|+++|+++||+|++++|+........   ......+...+++++.+|   .+.+.+.+.
T Consensus         2 ~k~KILVt----GatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~---~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~   74 (312)
T d1qyda_           2 KKSRVLIV----GGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK---VQMLLYFKQLGAKLIEASLDDHQRLVDALK   74 (312)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH---HHHHHHHHTTTCEEECCCSSCHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhH---HHHHhhhccCCcEEEEeecccchhhhhhcc
Confidence            46789999    99999999999999999999999999764332100   011122345567777776   788888888


Q ss_pred             CCcccEEEeCCC-----cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCC----CChhHHHHHHHH
Q 025587          150 GVTFDVVLDNNG-----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPD----AGHVQVEKYISE  220 (250)
Q Consensus       150 ~~~~d~Vi~~ag-----~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~----~~~y~~~k~~~e  220 (250)
                      +  .++++++++     .+..++.++++++++.+..++++.|+.+++......+      ..+.    ..+..++++..+
T Consensus        75 ~--~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  146 (312)
T d1qyda_          75 Q--VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHA------LQPGSITFIDKRKVRRAIEA  146 (312)
T ss_dssp             T--CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCC------CSSTTHHHHHHHHHHHHHHH
T ss_pred             C--cchhhhhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccc------cchhhhhhHHHHHHHHhhcc
Confidence            7  688998876     4677899999999998888888999877665443222      2222    122335556667


Q ss_pred             hCCcEEEEecCeeecCCCC
Q 025587          221 NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       221 ~~~~~~ilRp~~i~G~~~~  239 (250)
                      .+++++++||+.+||+...
T Consensus       147 ~~~~~~i~r~~~~~g~~~~  165 (312)
T d1qyda_         147 ASIPYTYVSSNMFAGYFAG  165 (312)
T ss_dssp             TTCCBCEEECCEEHHHHTT
T ss_pred             cccceEEeccceeecCCcc
Confidence            7899999999999997543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.72  E-value=2.6e-18  Score=144.86  Aligned_cols=156  Identities=19%  Similarity=0.227  Sum_probs=111.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+||||||    |||||||++++++|+++||+|++++|+........+.  ..+..+...+++++.+|   .+.+.+.+.
T Consensus         2 ~kkKILVt----GatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (307)
T d1qyca_           2 SRSRILLI----GATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASGANIVHGSIDDHASLVEAVK   75 (307)
T ss_dssp             CCCCEEEE----STTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHH--HHHHHHHTTTCEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHH--HHHHhhccCCcEEEEeecccchhhhhhhh
Confidence            36899999    9999999999999999999999999987543321100  11122344567788777   667777777


Q ss_pred             CCcccEEEeCCC-cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCcEEEE
Q 025587          150 GVTFDVVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSNWASF  228 (250)
Q Consensus       150 ~~~~d~Vi~~ag-~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~~~il  228 (250)
                      +  .+.|+|+++ .+..++.++++++++.+++++++.|+.+.+......  .+..... ....+..++++.+.+++++++
T Consensus        76 ~--~~~vi~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~i~  150 (307)
T d1qyca_          76 N--VDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHA--VEPAKSV-FEVKAKVRRAIEAEGIPYTYV  150 (307)
T ss_dssp             T--CSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCC--CTTHHHH-HHHHHHHHHHHHHHTCCBEEE
T ss_pred             h--ceeeeecccccccchhhHHHHHHHHhccccceeeeccccccccccc--ccccccc-ccccccccchhhccCCCceec
Confidence            6  689999987 567788999999999999999998886654332211  1100000 012344666777889999999


Q ss_pred             ecCeeecCCCC
Q 025587          229 RPQYMIGSGNN  239 (250)
Q Consensus       229 Rp~~i~G~~~~  239 (250)
                      ||+.+||+..+
T Consensus       151 r~~~v~g~~~~  161 (307)
T d1qyca_         151 SSNCFAGYFLR  161 (307)
T ss_dssp             ECCEEHHHHTT
T ss_pred             ccceecCCCcc
Confidence            99999998644

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=2.4e-16  Score=133.23  Aligned_cols=149  Identities=15%  Similarity=0.227  Sum_probs=101.8

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhc---CC
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVG---GV  151 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~---~~  151 (250)
                      ||||    ||+||||++|+++|+++|+ +|+++++-......         ..+....+. ...| .+.....+.   -.
T Consensus         2 ILIT----GgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   67 (307)
T d1eq2a_           2 IIVT----GGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLNIA-DYMDKEDFLIQIMAGEEFG   67 (307)
T ss_dssp             EEEE----TTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG---------HHHHTSCCS-EEEEHHHHHHHHHTTCCCS
T ss_pred             EEEe----cCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh---------hcccccchh-hhccchHHHHHHhhhhccc
Confidence            8999    9999999999999999995 79998754322111         111112222 1223 222333322   23


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHH
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKY  217 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~  217 (250)
                      .+++|+|.|+              .++.++.+++++++..+++ +|+.||..+|......+..+..+..+. +.|+..|.
T Consensus        68 ~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~-~~Y~~~K~  145 (307)
T d1eq2a_          68 DVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPL-NVYGYSKF  145 (307)
T ss_dssp             SCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCS-SHHHHHHH
T ss_pred             chhhhhhhccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccc-cccccccc
Confidence            4789999987              3578899999999998885 666676666666555455555554444 78998886


Q ss_pred             HHHh---------CCcEEEEecCeeecCCCCCC
Q 025587          218 ISEN---------FSNWASFRPQYMIGSGNNKD  241 (250)
Q Consensus       218 ~~e~---------~~~~~ilRp~~i~G~~~~~~  241 (250)
                      ..|.         +++++++||+.+|||+...+
T Consensus       146 ~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~  178 (307)
T d1eq2a_         146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHK  178 (307)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGG
T ss_pred             hhhhhccccccccccccccccceeEeecccccc
Confidence            6654         58999999999999987543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.65  E-value=7.4e-16  Score=134.01  Aligned_cols=146  Identities=18%  Similarity=0.075  Sum_probs=108.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l  148 (250)
                      ++|+|+||    ||||+||++|+++|+++||+|++++|+.++....        ......+++++.+|    .+.+..++
T Consensus         2 ~kktIlVt----GatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--------~~~~~~~v~~~~gD~~d~~~~~~~a~   69 (350)
T d1xgka_           2 QKKTIAVV----GATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--------ELQAIPNVTLFQGPLLNNVPLMDTLF   69 (350)
T ss_dssp             CCCCEEEE----STTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--------HHHTSTTEEEEESCCTTCHHHHHHHH
T ss_pred             CCCEEEEE----CCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--------hhcccCCCEEEEeeCCCcHHHHHHHh
Confidence            57899999    9999999999999999999999999987554310        00123467888887    34466777


Q ss_pred             cCCcccEEEeCCC----cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCCCCCCChhHHHHHHHHhCCc
Q 025587          149 GGVTFDVVLDNNG----KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYISENFSN  224 (250)
Q Consensus       149 ~~~~~d~Vi~~ag----~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e~~~~  224 (250)
                      .+  +|+++....    .++..++++++++++.|++++++.||.+.+......+     .......+...++++.+.+++
T Consensus        70 ~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~  142 (350)
T d1xgka_          70 EG--AHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWP-----AVPMWAPKFTVENYVRQLGLP  142 (350)
T ss_dssp             TT--CSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCC-----CCTTTHHHHHHHHHHHTSSSC
T ss_pred             cC--CceEEeecccccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCccc-----chhhhhhHHHHHHHHHhhccC
Confidence            77  577776543    5678899999999999998999999876554332211     111112456677788888999


Q ss_pred             EEEEecCeeecCC
Q 025587          225 WASFRPQYMIGSG  237 (250)
Q Consensus       225 ~~ilRp~~i~G~~  237 (250)
                      ++++||+.+++..
T Consensus       143 ~~~vr~~~~~~~~  155 (350)
T d1xgka_         143 STFVYAGIYNNNF  155 (350)
T ss_dssp             EEEEEECEEGGGC
T ss_pred             ceeeeeceeeccc
Confidence            9999999988754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.60  E-value=1e-15  Score=127.63  Aligned_cols=142  Identities=21%  Similarity=0.236  Sum_probs=102.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..+.+.++        .......+.+|   +++++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~   72 (244)
T d1nffa_           5 TGKVALVS----GGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE--------LADAARYVHLDVTQPAQWKAAVD   72 (244)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hhCcceEEEeecCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999988665543221        12344555565   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++||+||.                    |+.+    ++.++..+++.+-++||++||...+.....    
T Consensus        73 ~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~----  148 (244)
T d1nffa_          73 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA----  148 (244)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc----
Confidence            2     259999999992                    3333    555666666666789999999875543222    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                              ...|++.|...            +.+++++.|.||.+..+..
T Consensus       149 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  190 (244)
T d1nffa_         149 --------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT  190 (244)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred             --------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhH
Confidence                    36788877332            3379999999999987754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.59  E-value=3.8e-15  Score=123.58  Aligned_cols=137  Identities=19%  Similarity=0.244  Sum_probs=99.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-  150 (250)
                      -++|+||||    ||++.||++++++|+++|++|++++|+.+..++.             ..+.++..|+++++++++. 
T Consensus         5 l~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-------------~~~~~Dv~~~~~v~~~~~~~   67 (237)
T d1uzma1           5 FVSRSVLVT----GGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-------------FGVEVDVTDSDAVDRAFTAV   67 (237)
T ss_dssp             CCCCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-------------EEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-------------eEEEEecCCHHHHHHHHHHH
Confidence            467999999    9999999999999999999999999987654421             1123334457776666543 


Q ss_pred             ----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCC
Q 025587          151 ----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       151 ----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                          .++|++||+||.                    |+.    .++.++..+++.+.++||++||...+.....      
T Consensus        68 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------  141 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN------  141 (237)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C------
T ss_pred             HHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc------
Confidence                259999999992                    333    3566777788888889999999765433221      


Q ss_pred             CCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          203 DVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                            ...|+++|...            ..+++++.|.||.+..+.
T Consensus       142 ------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~  182 (237)
T d1uzma1         142 ------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  182 (237)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             ------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChh
Confidence                  26788888433            237999999999997764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.59  E-value=1.4e-15  Score=127.56  Aligned_cols=141  Identities=21%  Similarity=0.208  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..++        ....+..+.+|   +++++++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~~~   71 (254)
T d1hdca_           4 SGKTVIIT----GGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE--------LGDAARYQHLDVTIEEDWQRVVA   71 (254)
T ss_dssp             CCSEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------TGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hCCceEEEEcccCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999988665543222        12345566666   667766664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++||+||.                    |+.    .++.++..+++.+.++||++||...+.....    
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~----  147 (254)
T d1hdca_          72 YAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL----  147 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc----
Confidence            2     259999999992                    333    3556666667777789999999875543222    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                              ...|.+.|...            ..+++++.|.||.+..+.
T Consensus       148 --------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~  188 (254)
T d1hdca_         148 --------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM  188 (254)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             --------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc
Confidence                    36788887333            336999999999997653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.59  E-value=3.9e-15  Score=124.27  Aligned_cols=144  Identities=17%  Similarity=0.180  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++.....       ..+.....+..+.+|   +++++++++
T Consensus         4 ~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-------~~~~~g~~~~~~~~Dvs~~~~v~~~~~   72 (247)
T d2ew8a1           4 KDKLAVIT----GGANGIGRAIAERFAVEGADIAIADLVPAPEAEA-------AIRNLGRRVLTVKCDVSQPGDVEAFGK   72 (247)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH-------HHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHH-------HHHHcCCcEEEEEeeCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999976422110       001122345566666   666666653


Q ss_pred             C-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||.                    |+    ..++.++..+++.+-+++|++||.....+...    
T Consensus        73 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~----  148 (247)
T d2ew8a1          73 QVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA----  148 (247)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc----
Confidence            2     259999999992                    33    34666777777777789999999875433222    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                              ...|+++|...            ..+++++.|.||.+..+..+
T Consensus       149 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~  191 (247)
T d2ew8a1         149 --------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  191 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             --------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccc
Confidence                    26788887332            33799999999999887644

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.59  E-value=8.9e-16  Score=128.51  Aligned_cols=147  Identities=19%  Similarity=0.208  Sum_probs=102.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|.+|||    ||++.||++++++|+++|++|++.+|+++..++..+.    +. .....+..+.+|   ++++.++++
T Consensus         9 enKvalIT----Gas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~----l~-~~g~~~~~~~~Dvt~~~~v~~~~~   79 (251)
T d2c07a1           9 ENKVALVT----GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDE----IK-SFGYESSGYAGDVSKKEEISEVIN   79 (251)
T ss_dssp             SSCEEEEE----STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHH----HH-TTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987655433211    00 012234556666   677766664


Q ss_pred             C-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||++|.                    |+    ..++.++..+++.+.++||++||...+.+...    
T Consensus        80 ~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~----  155 (251)
T d2c07a1          80 KILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG----  155 (251)
T ss_dssp             HHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT----
T ss_pred             HHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC----
Confidence            2     269999999992                    23    33566677777777789999999875543222    


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~~  240 (250)
                              ...|+++|..            ...+++++.|.||.+-.+..+.
T Consensus       156 --------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~  199 (251)
T d2c07a1         156 --------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK  199 (251)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc
Confidence                    2678888733            3337999999999998886544

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=8.3e-16  Score=128.11  Aligned_cols=141  Identities=18%  Similarity=0.187  Sum_probs=103.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..+.+.+        ........+.+|   +++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~   70 (243)
T d1q7ba_           3 EGKIALVT----GASRGIGRAIAETLAARGAKVIGTATSENGAQAISD--------YLGANGKGLMLNVTDPASIESVLE   70 (243)
T ss_dssp             TTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------HHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--------HhCCCCcEEEEEecCHHHhhhhhh
Confidence            47899999    999999999999999999999999998866554321        122344555555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||.                    |+    ..++.+++.+++.+-++||++||...+.+...    
T Consensus        71 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~----  146 (243)
T d1q7ba_          71 KIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG----  146 (243)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----
T ss_pred             hhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC----
Confidence            2     259999999992                    33    34666777777777789999999876544322    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                              ...|.++|...            ..+++++.|.||.+-.+.
T Consensus       147 --------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~  187 (243)
T d1q7ba_         147 --------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDM  187 (243)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             --------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechh
Confidence                    26788887332            337999999999997664

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.58  E-value=6.2e-15  Score=122.65  Aligned_cols=141  Identities=16%  Similarity=0.143  Sum_probs=101.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..++..+          ..+.+.+.+|   +++++++++
T Consensus         4 ~gK~~lIT----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           4 KDKAVLIT----GAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE----------AVGAHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------TTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----------HcCCeEEEEecCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998766553321          1234455555   777776664


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||.                    |+.+    ++.+++.+++.+..+++++||....+..      
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~------  143 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------  143 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------
T ss_pred             HHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC------
Confidence            3     259999999992                    3334    5556666666677788888876543321      


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~~  240 (250)
                             ....|++.|...            ..+++++.|.||.+-.+....
T Consensus       144 -------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~  188 (242)
T d1ulsa_         144 -------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (242)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             -------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc
Confidence                   126688887332            336999999999998887544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.57  E-value=4.8e-15  Score=123.97  Aligned_cols=147  Identities=18%  Similarity=0.188  Sum_probs=103.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..+.    +.+.....+..+.+|   +++++++++
T Consensus         4 ~gK~~lIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----l~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (251)
T d1vl8a_           4 RGRVALVT----GGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQK----LTEKYGVETMAFRCDVSNYEEVKKLLE   75 (251)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHHhCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987655432111    111123345556666   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||.                    |+    ..++.++..+++.+-+++|+++|........     
T Consensus        76 ~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~-----  150 (251)
T d1vl8a_          76 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM-----  150 (251)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC-----
Confidence            3     259999999992                    33    3466667777777778999999865322111     


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                            +....|++.|..            .+.+++++.|.||.+-.+..
T Consensus       151 ------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~  194 (251)
T d1vl8a_         151 ------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT  194 (251)
T ss_dssp             ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred             ------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHH
Confidence                  112568888733            33379999999999988764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.7e-15  Score=124.17  Aligned_cols=140  Identities=19%  Similarity=0.177  Sum_probs=101.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||++.||++++++|+++|++|++++|+++.++++.++         ..++..+.+|   .++++++++
T Consensus         6 ~GK~~lIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~   72 (244)
T d1pr9a_           6 AGRRVLVT----GAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---------CPGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------STTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh---------cCCCeEEEEeCCCHHHHHHHHH
Confidence            56899999    9999999999999999999999999988665543211         1234444454   788888886


Q ss_pred             CC-cccEEEeCCCc--------------------CHHh----HHHHHHH-HHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 GV-TFDVVLDNNGK--------------------NLDA----VRPVADW-AKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~--------------------~~~~----~~~ll~~-~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      .. ++|++||+||.                    |+.+    ++.++.. +++.+.+++|++||.........       
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~-------  145 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN-------  145 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc-------
Confidence            53 69999999992                    3333    5555553 33445679999999775443222       


Q ss_pred             CCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                           ...|+++|..            ...+++++.|.||.|..+.
T Consensus       146 -----~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  186 (244)
T d1pr9a_         146 -----HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             -----hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence                 2668877732            2337999999999998775

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=8.5e-15  Score=122.25  Aligned_cols=137  Identities=20%  Similarity=0.142  Sum_probs=99.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..+..           ...+...+.+|   +++++++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-----------~~~~~~~~~~Dv~~~~~v~~~~~   68 (248)
T d2d1ya1           4 AGKGVLVT----GGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-----------EAIGGAFFQVDLEDERERVRFVE   68 (248)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-----------HHHTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HHcCCeEEEEeCCCHHHHHHHHH
Confidence            47899999    9999999999999999999999999987543311           11233445555   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     .++|++||+||.                    |+.    .++.++..+++.+-++||++||...+.....    
T Consensus        69 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~----  144 (248)
T d2d1ya1          69 EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE----  144 (248)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT----
T ss_pred             HHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc----
Confidence            3     259999999992                    333    3666667777777789999999875543222    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                              ...|.+.|...            ..+++++.|.||.+-.+
T Consensus       145 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  184 (248)
T d2d1ya1         145 --------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  184 (248)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence                    36788877432            33799999999999765

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.56  E-value=3.8e-15  Score=124.95  Aligned_cols=141  Identities=18%  Similarity=0.163  Sum_probs=100.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..+...+        .....+..+.+|   ++++.++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~--------~~~~~~~~~~~Dvt~~~~v~~~~~   71 (256)
T d1k2wa_           4 DGKTALIT----GSARGIGRAFAEAYVREGARVAIADINLEAARATAA--------EIGPAACAIALDVTDQASIDRCVA   71 (256)
T ss_dssp             TTEEEEEE----TCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHH--------HHCTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HhCCceEEEEeeCCCHHHHHHHHH
Confidence            46899999    999999999999999999999999998766553321        123345556666   677776664


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHH----HHHHH-HhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRP----VADWA-KSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~----ll~~~-~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||+||                    +|+.++..    ++..+ ++.+.++||++||...+.+...   
T Consensus        72 ~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~---  148 (256)
T d1k2wa_          72 ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL---  148 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc---
Confidence            3     25999999999                    23444444    44433 3334579999999875543222   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|.+.|..            ...+|+++.|.||.+-.+.
T Consensus       149 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         149 ---------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             ---------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence                     2678877733            2337999999999998875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=9e-15  Score=121.65  Aligned_cols=140  Identities=20%  Similarity=0.142  Sum_probs=100.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+++..+++.++         ..++..+.+|   +++++++++
T Consensus         4 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~   70 (242)
T d1cyda_           4 SGLRALVT----GAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---------CPGIEPVCVDLGDWDATEKALG   70 (242)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------STTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---------cCCCeEEEEeCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987655433211         1234455555   888888887


Q ss_pred             CC-cccEEEeCCCc--------------------CHHhHHH----HHHHHH-hCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          150 GV-TFDVVLDNNGK--------------------NLDAVRP----VADWAK-SSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       150 ~~-~~d~Vi~~ag~--------------------~~~~~~~----ll~~~~-~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      .. ++|++||+||.                    |+.+...    ++..+. +.+.+++|++||...+.....       
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-------  143 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN-------  143 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT-------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc-------
Confidence            53 69999999992                    3444444    443332 334569999999875543222       


Q ss_pred             CCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                           ...|++.|...            ..+++++.|.||.+..+.
T Consensus       144 -----~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~  184 (242)
T d1cyda_         144 -----LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  184 (242)
T ss_dssp             -----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             -----cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence                 36688887333            236999999999997664

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.55  E-value=4.5e-15  Score=124.69  Aligned_cols=146  Identities=17%  Similarity=0.176  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|++ +..+++.+.    +.......+..+.+|   ++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (260)
T d1x1ta1           3 KGKVAVVT----GSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAG----LAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHH----HHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CcCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH----HHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999975 333322110    011123345556666   67777766


Q ss_pred             cC-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|++||+||.                    |+    ..++.+++.+++.+-+++|++||...+.....   
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---  151 (260)
T d1x1ta1          75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN---  151 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC---
Confidence            43     259999999992                    33    34666777777777789999999875543222   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|.+.|...+            .+++++.|.||.+-.+..
T Consensus       152 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~  193 (260)
T d1x1ta1         152 ---------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLV  193 (260)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred             ---------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhh
Confidence                     267888883332            369999999999987753

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.54  E-value=1.5e-15  Score=127.56  Aligned_cols=145  Identities=21%  Similarity=0.191  Sum_probs=101.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..+...+.    +.. .....+..+.+|   ++++++++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~----~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           3 TDRVVLIT----GGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA----VLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            46899999    9999999999999999999999999987655432111    000 012234455565   67776665


Q ss_pred             cC-----CcccEEEeCCCc---------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK---------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|++||+||+                     |+.+    ++.++..+++.+-++||++||...+....   
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---  151 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG---  151 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS---
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC---
Confidence            43     259999999982                     3333    55556666666778999999977543321   


Q ss_pred             ccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                               ....|.+.|..            ...+|+++.|.||.+..+.
T Consensus       152 ---------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~  193 (258)
T d1iy8a_         152 ---------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  193 (258)
T ss_dssp             ---------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHH
Confidence                     13678888733            3337999999999997653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.54  E-value=2.6e-14  Score=118.15  Aligned_cols=134  Identities=21%  Similarity=0.201  Sum_probs=97.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l  148 (250)
                      ++|+||||    ||++.||++++++|+++|++|++.+|+++.+++              .+.+++.+|    .+.+.+.+
T Consensus         3 kgK~~lVT----Gas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------------~~~~~~~~Dv~~~~~~~~~~~   64 (234)
T d1o5ia_           3 RDKGVLVL----AASRGIGRAVADVLSQEGAEVTICARNEELLKR--------------SGHRYVVCDLRKDLDLLFEKV   64 (234)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------------TCSEEEECCTTTCHHHHHHHS
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------------cCCcEEEcchHHHHHHHHHHh
Confidence            46899999    999999999999999999999999998755442              233455566    33344434


Q ss_pred             cCCcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          149 GGVTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      .  ++|++||+||.                    |+    ..++.++..+++.+.+++|+++|.........        
T Consensus        65 g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~--------  134 (234)
T d1o5ia_          65 K--EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN--------  134 (234)
T ss_dssp             C--CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------
T ss_pred             C--CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc--------
Confidence            3  48999999992                    22    23666777777777789999999765543322        


Q ss_pred             CCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          205 VKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       205 ~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                          ...|.+.|.            +...+++++.|.||.+-.+..
T Consensus       135 ----~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~  176 (234)
T d1o5ia_         135 ----LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV  176 (234)
T ss_dssp             ----BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH
T ss_pred             ----cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhh
Confidence                256776663            233379999999999987753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=7e-15  Score=123.53  Aligned_cols=146  Identities=18%  Similarity=0.192  Sum_probs=94.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+++.+++..+.    +. .....+..+.+|   ++++.++++
T Consensus         7 kgK~alVT----Gas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~   77 (259)
T d1xq1a_           7 KAKTVLVT----GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK----WQ-KKGFQVTGSVCDASLRPEREKLMQ   77 (259)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCceEEEeccCCCHHHHHHHHH
Confidence            47899999    9999999999999999999999999987665533211    00 012245566666   555555543


Q ss_pred             C------CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G------VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~------~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .      ..+|++||+||.                    |+.+    ++.++..+++.+.+++|++||.........   
T Consensus        78 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~---  154 (259)
T d1xq1a_          78 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV---  154 (259)
T ss_dssp             HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------
T ss_pred             HHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc---
Confidence            1      258999999992                    3444    556666667677789999999764433221   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                               ...|.+.|...            ..+++++.|.||.|-.+...
T Consensus       155 ---------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~  197 (259)
T d1xq1a_         155 ---------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE  197 (259)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----
T ss_pred             ---------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh
Confidence                     26688877333            23799999999999887643

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.53  E-value=6.6e-15  Score=123.71  Aligned_cols=143  Identities=17%  Similarity=0.180  Sum_probs=102.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+++..++..+.    +. .....+..+.+|   +++++++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~----~~-~~g~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           4 NGKVCLVT----GAGGNIGLATALRLAEEGTAIALLDMNREALEKAEAS----VR-EKGVEARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-TTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEccCCCHHHHHHHHH
Confidence            47899999    9999999999999999999999999987665533211    00 012245566666   666666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     ..+|++||+||.                     |+.    .++.++..+++.+-+++|++||...+.....   
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~---  151 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN---  151 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT---
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc---
Confidence            3     259999999982                     233    3556666666667789999999876543322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                               ...|.+.|...            ..+++++.|.||.|-.+
T Consensus       152 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         152 ---------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence                     26788887332            23699999999999765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.3e-14  Score=121.25  Aligned_cols=138  Identities=20%  Similarity=0.202  Sum_probs=100.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..+.+.+.         ..++..+.+|   +++++++++
T Consensus         5 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~---------~~~~~~~~~Dvs~~~~v~~~~~   71 (250)
T d1ydea1           5 AGKVVVVT----GGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE---------LPGAVFILCDVTQEDDVKTLVS   71 (250)
T ss_dssp             TTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---------CTTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---------cCCCeEEEccCCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987665543211         1234555565   666666654


Q ss_pred             C-----CcccEEEeCCCc---------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK---------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~---------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||+||.                     |+.    .++.+++.+++.+ +++|++||...+.....   
T Consensus        72 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~---  147 (250)
T d1ydea1          72 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQ---  147 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTT---
T ss_pred             HHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccC---
Confidence            3     259999999992                     333    3556666666644 69999999876544322   


Q ss_pred             cCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecC
Q 025587          200 VEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGS  236 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~  236 (250)
                               ...|.+.|..            ...+++++.|.||.|-.+
T Consensus       148 ---------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~  187 (250)
T d1ydea1         148 ---------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP  187 (250)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred             ---------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence                     2678888733            233799999999999765

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=6.6e-15  Score=123.42  Aligned_cols=144  Identities=17%  Similarity=0.178  Sum_probs=102.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..++    +. .....+..+.+|   +++++++++
T Consensus        10 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~----l~-~~g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_          10 DGKCAIIT----GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDE----IQ-QLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-HcCCcEEEEEccCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999987665533211    00 012345566666   666666654


Q ss_pred             C-----CcccEEEeCCCc-------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          150 G-----VTFDVVLDNNGK-------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                      .     ..+|++||+||.                   |+.+    ++.++..+++.+-.++|++||...+.....     
T Consensus        81 ~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~-----  155 (255)
T d1fmca_          81 FAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN-----  155 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-----
T ss_pred             HHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc-----
Confidence            2     259999999992                   3333    555666666767778999999775543322     


Q ss_pred             CCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                             ...|+++|...            ..+++++.|.||.|..+.
T Consensus       156 -------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  196 (255)
T d1fmca_         156 -------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA  196 (255)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             -------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChH
Confidence                   36788887333            236999999999997764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.53  E-value=1.6e-14  Score=121.26  Aligned_cols=142  Identities=18%  Similarity=0.158  Sum_probs=101.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+.+++..+       ++.  ...+..+.+|   +++++++
T Consensus         7 ~GK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-------~~~~~g~~~~~~~~Dv~~~~~v~~~   75 (259)
T d2ae2a_           7 EGCTALVT----GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLT-------QWRSKGFKVEASVCDLSSRSERQEL   75 (259)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-------HHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHHhcCCCceEEEeeCCCHHHHHHH
Confidence            47899999    999999999999999999999999998766553321       111  2234455666   6666655


Q ss_pred             hc------CCcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCC
Q 025587          148 VG------GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~------~~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++      +.++|++||+||.                    |+.+    ++.++..+++.+-+++|++||......... 
T Consensus        76 ~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-  154 (259)
T d2ae2a_          76 MNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY-  154 (259)
T ss_dssp             HHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT-
T ss_pred             HHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc-
Confidence            43      2258999999992                    3333    555666677777789999999765433222 


Q ss_pred             CccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                 ...|.+.|...            ..+++++.|.||.|-.+.
T Consensus       155 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  195 (259)
T d2ae2a_         155 -----------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL  195 (259)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred             -----------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHH
Confidence                       36788777332            236999999999997654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.53  E-value=1.7e-14  Score=121.60  Aligned_cols=145  Identities=20%  Similarity=0.202  Sum_probs=102.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCC---HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D---~~~l~~~l  148 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+++..++..+.       +. ...+.++.+|   ++++++++
T Consensus         5 ~gKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-------l~~~~~~~~~~~Dv~~~~~v~~~~   73 (268)
T d2bgka1           5 QDKVAIIT----GGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN-------IGSPDVISFVHCDVTKDEDVRNLV   73 (268)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------hcCCCceEEEEccCCCHHHHHHHH
Confidence            57899999    9999999999999999999999999987655433211       11 1224455555   67777766


Q ss_pred             cC-----CcccEEEeCCCc----------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~----------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      +.     .++|++||+||.                      |+.    .++.+++.+++.+-+++|++||...+......
T Consensus        74 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~  153 (268)
T d2bgka1          74 DTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV  153 (268)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS
T ss_pred             HHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc
Confidence            42     259999999982                      233    36666777777777899999997654332211


Q ss_pred             CccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                                 ...|.+.|..            ...+++++.|.||.+.++...
T Consensus       154 -----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~  196 (268)
T d2bgka1         154 -----------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLT  196 (268)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCT
T ss_pred             -----------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHh
Confidence                       1357777732            333799999999999888643

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.52  E-value=2.2e-14  Score=120.32  Aligned_cols=145  Identities=17%  Similarity=0.198  Sum_probs=98.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||++.||++++++|+++|++|++++|+++.+++..+.    +. .....+..+.+|   .++++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~----~~-~~~~~~~~~~~D~s~~~~~~~~~~   75 (258)
T d1ae1a_           5 KGTTALVT----GGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEI----WR-EKGLNVEGSVCDLLSRTERDKLMQ   75 (258)
T ss_dssp             TTCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCCceEEEeecCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987655432211    00 112234455666   555555442


Q ss_pred             ----C--CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          150 ----G--VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ----~--~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                          .  ..+|+++|++|.                    |+.    .++.++..+++.+.+++|++||.....+...   
T Consensus        76 ~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~---  152 (258)
T d1ae1a_          76 TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS---  152 (258)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc---
Confidence                1  258999999992                    233    3555566666777889999999876543322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ...|.+.|...            ..+|+++.|.||.+..+..
T Consensus       153 ---------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~  194 (258)
T d1ae1a_         153 ---------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV  194 (258)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcch
Confidence                     36688777322            3379999999999988753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.51  E-value=1.8e-14  Score=120.69  Aligned_cols=142  Identities=20%  Similarity=0.184  Sum_probs=97.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|.+|||    ||++.||++++++|+++|++|++.+|+++..++..+.    +. .....+..+.+|   ++++.++++.
T Consensus         1 KKValIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~----i~-~~g~~~~~~~~Dv~~~~~v~~~~~~   71 (255)
T d1gega_           1 KKVALVT----GAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE----IN-QAGGHAVAVKVDVSDRDQVFAAVEQ   71 (255)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEc----CCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            3567999    9999999999999999999999999988665543211    00 112345556666   6666666542


Q ss_pred             -----CcccEEEeCCC--------------------cCHHhH----HHHHHHHHhC-CCCEEEEEcCcccccCCCCCCcc
Q 025587          151 -----VTFDVVLDNNG--------------------KNLDAV----RPVADWAKSS-GVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       151 -----~~~d~Vi~~ag--------------------~~~~~~----~~ll~~~~~~-~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                           .++|++||+||                    +|+.++    +.++..+++. +..++|++||...+.....    
T Consensus        72 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~----  147 (255)
T d1gega_          72 ARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE----  147 (255)
T ss_dssp             HHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT----
T ss_pred             HHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc----
Confidence                 25999999999                    244444    4445544443 3567999999775433222    


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                              ...|+++|...            ..+++++.|.||.+-.+
T Consensus       148 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         148 --------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             --------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence                    36688887432            33799999999998655

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=6.2e-15  Score=122.83  Aligned_cols=147  Identities=13%  Similarity=0.074  Sum_probs=104.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      .+|.||||    ||++.||++++++|+++|++|++++|+.++.+++.+.    +. ....++..+.+|   ++++.++++
T Consensus         6 ~Gkv~lIT----Gas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~----~~-~~~~~~~~~~~Dvs~~~~v~~~~~   76 (244)
T d1yb1a_           6 TGEIVLIT----GAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK----CK-GLGAKVHTFVVDCSNREDIYSSAK   76 (244)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEeeCCCHHHHHHHHH
Confidence            46899999    9999999999999999999999999998766543221    01 122345566666   666666553


Q ss_pred             C-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++|||||.                    |+.    .++.++..+++.+-++||++||...+.+..     
T Consensus        77 ~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~-----  151 (244)
T d1yb1a_          77 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----  151 (244)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----
T ss_pred             HHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC-----
Confidence            2     259999999992                    333    366667777778888999999977543321     


Q ss_pred             CCCCCCCCCChhHHHHHHH---------H------hCCcEEEEecCeeecCCCCC
Q 025587          201 EGDVVKPDAGHVQVEKYIS---------E------NFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~---------e------~~~~~~ilRp~~i~G~~~~~  240 (250)
                             ....|.++|...         |      .|++++.|.||.|-.+..+.
T Consensus       152 -------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         152 -------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN  199 (244)
T ss_dssp             -------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred             -------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC
Confidence                   136688887332         1      26899999999998775443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.51  E-value=1.5e-14  Score=120.89  Aligned_cols=143  Identities=19%  Similarity=0.220  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..+...+.    +.  ....+..+.+|   ++++.++++
T Consensus         5 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           5 DGKVAIIT----GGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKS----VG--TPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HC--CTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----hC--CCCcEEEEEccCCCHHHHHHHHH
Confidence            57999999    9999999999999999999999999987655433211    00  12245566666   666666654


Q ss_pred             C-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCCCC-EEEEEcCcccccCCCCCCc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSGVK-QFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~~~-~~v~iSS~~vy~~~~~~~~  199 (250)
                      .     .++|++||+||.                    |+.+    ++.++..+++.+.+ ++|++||...+.....   
T Consensus        75 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~---  151 (251)
T d1zk4a1          75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS---  151 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---
T ss_pred             HHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC---
Confidence            2     259999999992                    3334    55556666666654 8999999765433221   


Q ss_pred             cCCCCCCCCCChhHHHHHH--------------HHhCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYI--------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~--------------~e~~~~~~ilRp~~i~G~~  237 (250)
                               ...|++.|..              .+.+++++.|.||.|..+.
T Consensus       152 ---------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~  194 (251)
T d1zk4a1         152 ---------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL  194 (251)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred             ---------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh
Confidence                     2568877721              1236999999999997764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.51  E-value=1.5e-14  Score=120.19  Aligned_cols=142  Identities=18%  Similarity=0.172  Sum_probs=101.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCe-------EEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHE-------VTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PA  142 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~-------V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~  142 (250)
                      +.||||    ||+++||++++++|+++|++       |++.+|+.+.++++.+       ++.  ...+..+.+|   ++
T Consensus         2 ~VvlIT----Gas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~-------~~~~~g~~~~~~~~Dvt~~~   70 (240)
T d2bd0a1           2 HILLIT----GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISL-------ECRAEGALTDTITADISDMA   70 (240)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHH-------HHHTTTCEEEEEECCTTSHH
T ss_pred             CEEEEc----cCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHH-------HHHhcCCcEEEEEecCCCHH
Confidence            458999    99999999999999999987       8888998766554321       111  1234455666   66


Q ss_pred             HHHhhhcC-----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          143 EVGNVVGG-----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       143 ~l~~~l~~-----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ++.++++.     ..+|++||+||.                    |+    ..++.+++.+++.+-+++|++||...+.+
T Consensus        71 ~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~  150 (240)
T d2bd0a1          71 DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA  150 (240)
T ss_dssp             HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC
Confidence            66665542     259999999992                    33    34666777777777789999999875543


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...            ...|.++|...            +.+++++.|.||.+-.+..+
T Consensus       151 ~~~------------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~  196 (240)
T d2bd0a1         151 FRH------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  196 (240)
T ss_dssp             CTT------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             CCC------------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh
Confidence            322            36788887322            23699999999999888643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=9.7e-15  Score=122.22  Aligned_cols=146  Identities=16%  Similarity=0.156  Sum_probs=99.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++++|+.+..++..+....   ......+..+.+|   +++++++++
T Consensus         2 ~GKvalIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (254)
T d2gdza1           2 NGKVALVT----GAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE---QFEPQKTLFIQCDVADQQQLRDTFR   74 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT---TSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---hcCCCcEEEEEeecCCHHHHHHHHH
Confidence            47899999    9999999999999999999999999987654432211000   0112345556666   666666654


Q ss_pred             C-----CcccEEEeCCCc------------CH----HhHHHHHHHHHhCC---CCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          150 G-----VTFDVVLDNNGK------------NL----DAVRPVADWAKSSG---VKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~------------~~----~~~~~ll~~~~~~~---~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      .     .++|++||+||.            |+    ..++.+++.+++.+   ..+||++||...+.+...         
T Consensus        75 ~~~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~---------  145 (254)
T d2gdza1          75 KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ---------  145 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT---------
T ss_pred             HHHHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC---------
Confidence            2     259999999993            33    34556666665533   357999999875543222         


Q ss_pred             CCCCChhHHHHH----------H----HHhCCcEEEEecCeeecCC
Q 025587          206 KPDAGHVQVEKY----------I----SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       206 ~~~~~~y~~~k~----------~----~e~~~~~~ilRp~~i~G~~  237 (250)
                         ...|.++|.          +    ...+++++.|.||.|-.+.
T Consensus       146 ---~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~  188 (254)
T d2gdza1         146 ---QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI  188 (254)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred             ---ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh
Confidence               256777762          1    1236999999999996653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.50  E-value=1.5e-14  Score=121.24  Aligned_cols=143  Identities=20%  Similarity=0.200  Sum_probs=100.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +|.+|||    ||++.||++++++|+++|++|++.+|+++..++..+.    +. .....+..+.+|   +++++++++.
T Consensus         2 gKValIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~----l~-~~g~~~~~~~~Dvs~~~~v~~~~~~   72 (257)
T d2rhca1           2 SEVALVT----GATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE----LR-EAGVEADGRTCDVRSVPEIEALVAA   72 (257)
T ss_dssp             CCEEEEE----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HH-HTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            5788999    9999999999999999999999999987655533211    00 012245556666   6666666542


Q ss_pred             -----CcccEEEeCCC--------------------cCHHhHHHHHHHHH------hCCCCEEEEEcCcccccCCCCCCc
Q 025587          151 -----VTFDVVLDNNG--------------------KNLDAVRPVADWAK------SSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       151 -----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~------~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                           .++|++|||||                    +|+.++..+.+++.      +.+..++|+++|...+.....   
T Consensus        73 ~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~---  149 (257)
T d2rhca1          73 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH---  149 (257)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT---
T ss_pred             HHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc---
Confidence                 25999999999                    35666666666553      345568999999765543322   


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|....            .+++++.|.||.|-.+.
T Consensus       150 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  190 (257)
T d2rhca1         150 ---------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  190 (257)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHH
T ss_pred             ---------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHH
Confidence                     267888884332            25999999999997653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.50  E-value=1.4e-14  Score=121.19  Aligned_cols=140  Identities=19%  Similarity=0.277  Sum_probs=98.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++..+++.++        .......+.+|   +++++++++
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~~~~~~~   72 (253)
T d1hxha_           5 QGKVALVT----GGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE--------LGERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH--------HCTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------hCCCeEEEEeecCCHHHHHHHHH
Confidence            57899999    9999999999999999999999999987665543211        12334455555   666666554


Q ss_pred             C-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCcc
Q 025587          150 G-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      .     ..+|++||+||.                    |+.    .++.+++.+++.+ .+||++||...+.+...    
T Consensus        73 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~----  147 (253)
T d1hxha_          73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ----  147 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT----
T ss_pred             HHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccc----
Confidence            2     258999999992                    333    3566666666554 79999999775433221    


Q ss_pred             CCCCCCCCCChhHHHHHH------------HHhC--CcEEEEecCeeecCC
Q 025587          201 EGDVVKPDAGHVQVEKYI------------SENF--SNWASFRPQYMIGSG  237 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~------------~e~~--~~~~ilRp~~i~G~~  237 (250)
                              ...|.++|..            .+.+  ++++.|.||.+..+.
T Consensus       148 --------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~  190 (253)
T d1hxha_         148 --------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             --------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             --------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh
Confidence                    3668877722            2223  899999999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.3e-14  Score=124.16  Aligned_cols=150  Identities=17%  Similarity=0.107  Sum_probs=99.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      -++|++|||    ||++.||++++++|+++|++|++.+|+.++.+...++-...+.......+..+.+|   ++++.+++
T Consensus        10 L~gKvalIT----Gas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   85 (297)
T d1yxma1          10 LQGQVAIVT----GGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   85 (297)
T ss_dssp             TTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHH
Confidence            367999999    99999999999999999999999999876544321110000011112345566666   66666665


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHh----HHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDA----VRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~----~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|++||+||                    +|+.+    ++.++..+++.+..++|++|+....+.+     
T Consensus        86 ~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~-----  160 (297)
T d1yxma1          86 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFP-----  160 (297)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCT-----
T ss_pred             HHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccccc-----
Confidence            42     25999999999                    23444    4444555555566788888764422211     


Q ss_pred             cCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~  238 (250)
                              ....|.+.|...+            .+|+++.|.||.|..+..
T Consensus       161 --------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~  203 (297)
T d1yxma1         161 --------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA  203 (297)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGG
T ss_pred             --------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcch
Confidence                    1256777773322            269999999999988753

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.49  E-value=3.9e-14  Score=119.03  Aligned_cols=144  Identities=22%  Similarity=0.194  Sum_probs=100.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchh--cCCceEEeCC---HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~  145 (250)
                      -++|++|||    ||++.||++++++|+++|++|++.+|+.+. .+...       .++.  ...+..+.+|   +++++
T Consensus         5 L~gK~alIT----Gas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~-------~~~~~~g~~~~~~~~Dvt~~~~v~   73 (261)
T d1geea_           5 LEGKVVVIT----GSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-------EEIKKVGGEAIAVKGDVTVESDVI   73 (261)
T ss_dssp             GTTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-------HHHHHTTCEEEEEECCTTSHHHHH
T ss_pred             CCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-------HHHHhcCCcEEEEEccCCCHHHHH
Confidence            357899999    999999999999999999999999998642 22211       1111  2234455666   66666


Q ss_pred             hhhcC-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCC-CEEEEEcCcccccCCC
Q 025587          146 NVVGG-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGV-KQFLFISSAGIYKPAD  195 (250)
Q Consensus       146 ~~l~~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~-~~~v~iSS~~vy~~~~  195 (250)
                      ++++.     .++|++||+||.                    |+.    .++.+++.+++.+. .+||++||...+.+..
T Consensus        74 ~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~  153 (261)
T d1geea_          74 NLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP  153 (261)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc
Confidence            66542     259999999992                    333    35666776766654 4588999976543322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                      .            ...|.+.|...            ..+++++.|.||.|..+..
T Consensus       154 ~------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~  196 (261)
T d1geea_         154 L------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN  196 (261)
T ss_dssp             T------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred             c------------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH
Confidence            2            36788887333            3379999999999987653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.48  E-value=1e-13  Score=116.01  Aligned_cols=145  Identities=15%  Similarity=0.079  Sum_probs=97.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC----HHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD----PAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----~~~l~~~l  148 (250)
                      ++|+||||    ||+++||++++++|+++|++|+++.|+.+..+.+.+..    ......++.++..|    .+++.+++
T Consensus         4 ~gK~vlIT----Ggs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~   75 (254)
T d1sbya1           4 TNKNVIFV----AALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK----AINPKVNITFHTYDVTVPVAESKKLL   75 (254)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHH----HHCTTSEEEEEECCTTSCHHHHHHHH
T ss_pred             CCCEEEEe----cCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHH----hhCCCCCEEEEEeecCCCHHHHHHHH
Confidence            47899999    99999999999999999999999998876544321100    00112345555555    23444444


Q ss_pred             cC-----CcccEEEeCCC------------cCHHh----HHHHHHHHHhC---CCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          149 GG-----VTFDVVLDNNG------------KNLDA----VRPVADWAKSS---GVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag------------~~~~~----~~~ll~~~~~~---~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      +.     .++|++|++||            +|+.+    ++.+++.+.+.   +.+++|++||...+.+...        
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~--------  147 (254)
T d1sbya1          76 KKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------  147 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------
T ss_pred             HHHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC--------
Confidence            31     25999999999            34444    44455555442   3468999999876544322        


Q ss_pred             CCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCC
Q 025587          205 VKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       205 ~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~  237 (250)
                          ...|+++|..            ...+++++.|.||.|..+.
T Consensus       148 ----~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~  188 (254)
T d1sbya1         148 ----VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             ----CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc
Confidence                2668888733            2337999999999998773

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.48  E-value=6.3e-14  Score=118.60  Aligned_cols=141  Identities=16%  Similarity=0.193  Sum_probs=98.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|+||||    ||++.||++++++|+++|++|++++|+.+.++++.+        .....+..+.+|   .++++++++
T Consensus         4 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~--------~~~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           4 KGEAVLIT----GGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET--------DHGDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------HHGGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------HcCCCeeEEecccccHHHHHHHHH
Confidence            46899999    999999999999999999999999998766543321        123345566666   666666553


Q ss_pred             C-----CcccEEEeCCCc-------------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCC
Q 025587          150 G-----VTFDVVLDNNGK-------------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag~-------------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~  195 (250)
                      .     ..+|++||+||.                         |+.    .++.+++.+++.+ .++|+++|...+.+..
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~  150 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNG  150 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTS
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCC
Confidence            2     258999999982                         222    3556666666655 5788888865433221


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh-----------CCcEEEEecCeeecCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN-----------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~-----------~~~~~ilRp~~i~G~~~  238 (250)
                                  ....|+++|...+.           +++++.|.||.|-.+..
T Consensus       151 ------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~  192 (276)
T d1bdba_         151 ------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLR  192 (276)
T ss_dssp             ------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCC
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcC
Confidence                        12668888833222           49999999999977653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.47  E-value=3.6e-14  Score=120.03  Aligned_cols=145  Identities=15%  Similarity=0.122  Sum_probs=99.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+.+++..+.    +..  .....+..+.+|   +++++++
T Consensus         3 ~gK~alIT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~----i~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (274)
T d1xhla_           3 SGKSVIIT----GSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQ----ILKAGVPAEKINAVVADVTEASGQDDI   74 (274)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHcCCCCcceEEEEeeCCCHHHHHHH
Confidence            47899999    9999999999999999999999999987655433211    000  011235566666   6666666


Q ss_pred             hcC-----CcccEEEeCCCc----------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK----------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~----------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     .++|++||+||.                      |+.    .++.++..+++.+.++++++||...+.....
T Consensus        75 ~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~  154 (274)
T d1xhla_          75 INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG  154 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT
T ss_pred             HHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC
Confidence            542     258999999982                      222    3566666677767778888887653332211


Q ss_pred             CCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                                  ...|++.|...            ..+++++.|.||.|-.+.
T Consensus       155 ------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  195 (274)
T d1xhla_         155 ------------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  195 (274)
T ss_dssp             ------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             ------------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCch
Confidence                        25688777332            237999999999997763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.46  E-value=1.2e-14  Score=121.01  Aligned_cols=142  Identities=20%  Similarity=0.167  Sum_probs=98.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC-CccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD-ENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~-~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~  150 (250)
                      +.||||    ||++.||++++++|+++|++|++.+++. +..+.+.+.    + +.....+..+.+|   +++++++++.
T Consensus         2 pV~lIT----Gas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~----~-~~~g~~~~~~~~Dv~~~~~v~~~~~~   72 (244)
T d1edoa_           2 PVVVVT----GASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ----I-EAYGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHHTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----H-HHcCCcEEEEeCCCCCHHHHHHHHHH
Confidence            478999    9999999999999999999999876544 333322111    0 0112344556666   6666666542


Q ss_pred             -----CcccEEEeCCCc--------------------CH----HhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccC
Q 025587          151 -----VTFDVVLDNNGK--------------------NL----DAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVE  201 (250)
Q Consensus       151 -----~~~d~Vi~~ag~--------------------~~----~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e  201 (250)
                           .++|++||+||.                    |+    ..++.+++.+++.+-++||++||...+.+...     
T Consensus        73 ~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~-----  147 (244)
T d1edoa_          73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG-----  147 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-----
T ss_pred             HHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC-----
Confidence                 259999999992                    33    34666777777777789999999876544322     


Q ss_pred             CCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          202 GDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       202 ~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                             ...|++.|...            +.+++++.|.||.+-.+.
T Consensus       148 -------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~  188 (244)
T d1edoa_         148 -------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM  188 (244)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred             -------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHH
Confidence                   26788887333            337999999999997664

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.46  E-value=4.4e-14  Score=118.00  Aligned_cols=140  Identities=17%  Similarity=0.150  Sum_probs=96.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC-----
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG-----  150 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~-----  150 (250)
                      ++|||    ||++.||++++++|+++|++|++.+|+.+..+++..        .......++..|.++++++++.     
T Consensus         2 TAlVT----Gas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~--------~~~~~~~~dv~~~~~~~~~~~~~~~~~   69 (252)
T d1zmta1           2 TAIVT----NVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA--------FAETYPQLKPMSEQEPAELIEAVTSAY   69 (252)
T ss_dssp             EEEES----STTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH--------HHHHCTTSEECCCCSHHHHHHHHHHHH
T ss_pred             EEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh--------hhCcEEEeccCCHHHHHHHHHHHHHHc
Confidence            68999    999999999999999999999999998765553321        1111223344454444333321     


Q ss_pred             CcccEEEeCCCc---------------------C----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCCC
Q 025587          151 VTFDVVLDNNGK---------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDVV  205 (250)
Q Consensus       151 ~~~d~Vi~~ag~---------------------~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~~  205 (250)
                      .++|++|||||.                     |    +..++.++..+++.+-++||++||...+.....         
T Consensus        70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~---------  140 (252)
T d1zmta1          70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE---------  140 (252)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT---------
T ss_pred             CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc---------
Confidence            148999999982                     2    223566677777777789999999875543322         


Q ss_pred             CCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          206 KPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       206 ~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                         ...|.+.|..            .+.+++++.|.||.|-.+...
T Consensus       141 ---~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~  183 (252)
T d1zmta1         141 ---LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP  183 (252)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCC
T ss_pred             ---ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchh
Confidence               2668887732            333799999999999887643

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.6e-13  Score=112.82  Aligned_cols=140  Identities=13%  Similarity=0.101  Sum_probs=97.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++.++++.+.          .+++....|   .+.++...+
T Consensus         5 ~gK~alIT----Gas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~----------~~~~~~~~d~~~~~~~~~~~~   70 (245)
T d2ag5a1           5 DGKVIILT----AAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY----------PGIQTRVLDVTKKKQIDQFAN   70 (245)
T ss_dssp             TTCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS----------TTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----------cCCceeeeecccccccccccc
Confidence            46899999    9999999999999999999999999998766654322          245555555   333333332


Q ss_pred             C-CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCCC
Q 025587          150 G-VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGDV  204 (250)
Q Consensus       150 ~-~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~~  204 (250)
                      . ..+|++||++|.                    |+.    .++.+++.+++.+..++|++||......           
T Consensus        71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----------  139 (245)
T d2ag5a1          71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK-----------  139 (245)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-----------
T ss_pred             ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccC-----------
Confidence            1 248999999992                    333    3555566666667789999998542100           


Q ss_pred             CCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          205 VKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       205 ~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                      ..+....|++.|...            ..+++++.|.||.|-++.
T Consensus       140 ~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  184 (245)
T d2ag5a1         140 GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (245)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence            011236688777433            237999999999998764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.45  E-value=7.8e-14  Score=117.22  Aligned_cols=145  Identities=19%  Similarity=0.181  Sum_probs=96.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|.+|||    ||++.||++++++|+++|++|++.+|+.+..++..+.    +..  ....++..+.+|   +++++++
T Consensus         4 ~gKvalVT----Gas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~----l~~~~~~~~~~~~~~~Dvt~~~~v~~~   75 (264)
T d1spxa_           4 AEKVAIIT----GSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQ----ILAAGVSEQNVNSVVADVTTDAGQDEI   75 (264)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCcCceEEEEccCCCHHHHHHH
Confidence            57899999    9999999999999999999999999987665533211    000  112345666666   6666666


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHH----hHHHHHHHHHhCCCCEEEEEcCc-ccccC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLD----AVRPVADWAKSSGVKQFLFISSA-GIYKP  193 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~-~vy~~  193 (250)
                      ++.     .++|++||+||.                        |+.    .++.++..+++.+ .++|+++|. +.+..
T Consensus        76 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~  154 (264)
T d1spxa_          76 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA  154 (264)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC
T ss_pred             HHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecccccc
Confidence            542     259999999982                        222    3556666666644 355655554 32222


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                      ..            ....|++.|...            ..+++++.|.||.|-.+..
T Consensus       155 ~~------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~  199 (264)
T d1spxa_         155 TP------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG  199 (264)
T ss_dssp             CT------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-
T ss_pred             CC------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcch
Confidence            11            125688777332            3379999999999987753

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.45  E-value=5.5e-14  Score=118.69  Aligned_cols=144  Identities=20%  Similarity=0.165  Sum_probs=95.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+++.+++..+.    +..  .....+..+.+|   +++++++
T Consensus         4 ~gK~alVT----Gas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~----l~~~~~~~~~~~~~~~Dvs~~~~v~~~   75 (272)
T d1xkqa_           4 SNKTVIIT----GSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQI----ILKSGVSEKQVNSVVADVTTEDGQDQI   75 (272)
T ss_dssp             TTCEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEe----CcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCCCceEEEEccCCCHHHHHHH
Confidence            47899999    9999999999999999999999999988665433211    000  112235566666   6666666


Q ss_pred             hcC-----CcccEEEeCCCc------------------------CHHh----HHHHHHHHHhCCCCEEEEEcC-cccccC
Q 025587          148 VGG-----VTFDVVLDNNGK------------------------NLDA----VRPVADWAKSSGVKQFLFISS-AGIYKP  193 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~------------------------~~~~----~~~ll~~~~~~~~~~~v~iSS-~~vy~~  193 (250)
                      ++.     .++|++||+||.                        |+.+    ++.+++.+++.+- .+|+++| .+....
T Consensus        76 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~~  154 (272)
T d1xkqa_          76 INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQA  154 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSSC
T ss_pred             HHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-ccccccchhccccC
Confidence            542     259999999982                        2233    4555555655443 4555554 332222


Q ss_pred             CCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCC
Q 025587          194 ADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       194 ~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~  237 (250)
                      ..            ....|++.|...            ..+++++.|.||.|-.+.
T Consensus       155 ~~------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  198 (272)
T d1xkqa_         155 QP------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  198 (272)
T ss_dssp             CC------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             CC------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence            11            136688887332            237999999999997664

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.45  E-value=1.9e-13  Score=114.04  Aligned_cols=144  Identities=18%  Similarity=0.202  Sum_probs=100.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchh--cCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIV--SAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~--~~~v~~v~~D---~~~l~~~  147 (250)
                      .++||||    ||+|.||++++++|+++|+ +|+++.|+....+...+    ...++.  ...+.++.+|   .+++.++
T Consensus         9 ~gt~lVT----Ggs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~----~~~~l~~~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           9 TGTVLVT----GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGE----LVAELEALGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CSEEEEE----TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHH----HHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCEEEEE----CCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHH----HHHHHHhccccccccccccchHHHHHHh
Confidence            4689999    9999999999999999998 57778886433222110    011122  2345566666   6666666


Q ss_pred             hcC----CcccEEEeCCC--------------------cCHHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCccCCC
Q 025587          148 VGG----VTFDVVLDNNG--------------------KNLDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPHVEGD  203 (250)
Q Consensus       148 l~~----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~~e~~  203 (250)
                      ++.    ..+|.|+|++|                    .|+.+..++.++++..+.++||++||.........       
T Consensus        81 ~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~-------  153 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG-------  153 (259)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-------
T ss_pred             hccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc-------
Confidence            543    35899999999                    25778888888888888889999999875543322       


Q ss_pred             CCCCCCChhHHHHHHH--------HhCCcEEEEecCeeecCC
Q 025587          204 VVKPDAGHVQVEKYIS--------ENFSNWASFRPQYMIGSG  237 (250)
Q Consensus       204 ~~~~~~~~y~~~k~~~--------e~~~~~~ilRp~~i~G~~  237 (250)
                           ...|++.|...        ..|++++.|.||.+.+++
T Consensus       154 -----~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         154 -----LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG  190 (259)
T ss_dssp             -----CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred             -----cHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCc
Confidence                 25577777433        337999999999988765

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.44  E-value=6.6e-13  Score=109.58  Aligned_cols=142  Identities=17%  Similarity=0.154  Sum_probs=90.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC--HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD--PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D--~~~l~~~l~  149 (250)
                      ++|+||||    ||++.||++++++|+++|++|.++++.+.......        ........ ....|  ...+.+.+.
T Consensus         1 egK~vlIT----Gas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVY----GGRGALGSRCVQAFRARNWWVASIDVVENEEASAS--------VIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEE--------EECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccc--------ceeecccCcHHHHHHHHHHHHHHhC
Confidence            36899999    99999999999999999999999998763221100        00000000 00001  233334444


Q ss_pred             CCcccEEEeCCC---------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCCCCCC
Q 025587          150 GVTFDVVLDNNG---------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVK  206 (250)
Q Consensus       150 ~~~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~  206 (250)
                      ..++|++||+||                     .|+.+...+..++..  .+-+++|++||...+.+...          
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~----------  138 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG----------  138 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC----------
Confidence            456999999998                     234444444444433  12368999999875544322          


Q ss_pred             CCCChhHHHHHHHHh--------------CCcEEEEecCeeecCCC
Q 025587          207 PDAGHVQVEKYISEN--------------FSNWASFRPQYMIGSGN  238 (250)
Q Consensus       207 ~~~~~y~~~k~~~e~--------------~~~~~ilRp~~i~G~~~  238 (250)
                        ...|+++|...+.              +++++.|.||.+..+..
T Consensus       139 --~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~  182 (236)
T d1dhra_         139 --MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN  182 (236)
T ss_dssp             --BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH
T ss_pred             --CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc
Confidence              2678888843322              58999999999988753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=1.9e-13  Score=117.09  Aligned_cols=147  Identities=18%  Similarity=0.164  Sum_probs=97.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCC-CCc-ccchh--cCCceEEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPP-FNR-FNEIV--SAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~~~-~~~~~--~~~v~~v~~D~~~l~~~l  148 (250)
                      ++|++|||    ||+++||++++++|+++|++|++.+|+.+......... ... ..++.  ......+..|.+++++++
T Consensus         6 ~gKvalIT----Gas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           6 DGRVVLVT----GAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             TTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            46899999    99999999999999999999999998765432211110 000 00111  122335555655555544


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      +.     .++|++|||||+                    |+.    .++.++..+++.+-++||++||...+.....   
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~---  158 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG---  158 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT---
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC---
Confidence            31     259999999992                    343    3666677777777789999999875543322   


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeec
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIG  235 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G  235 (250)
                               ...|+++|...            +.+|+++.|.||.+-.
T Consensus       159 ---------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t  197 (302)
T d1gz6a_         159 ---------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR  197 (302)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence                     26788888332            2369999999997643

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.41  E-value=1.1e-12  Score=108.17  Aligned_cols=139  Identities=14%  Similarity=0.100  Sum_probs=89.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceE---EeCCHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT---VWGDPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~---v~~D~~~l~~~l~~~  151 (250)
                      .|||||    ||++.||++++++|+++|++|++++|+++......        .....++..   ...+.+.+...++..
T Consensus         3 gkVlIT----Gas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           3 GKVIVY----GGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN--------ILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             EEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE--------EECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEE----CCCCHHHHHHHHHHHHCCCEEEEEECCchhccccc--------ceeccccCchhHHHHHHHHHHHHhcCC
Confidence            579999    99999999999999999999999999864321100        000000100   000133444444445


Q ss_pred             cccEEEeCCC---------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCCCCCCCC
Q 025587          152 TFDVVLDNNG---------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEGDVVKPD  208 (250)
Q Consensus       152 ~~d~Vi~~ag---------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~~~~~~~  208 (250)
                      ++|++|||||                     +|+.++..+..++..  .+-+++|++||...+.+...            
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------  138 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS------------  138 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT------------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc------------
Confidence            6999999998                     234444444444433  12368999999875544322            


Q ss_pred             CChhHHHHHHHHh--------------CCcEEEEecCeeecCC
Q 025587          209 AGHVQVEKYISEN--------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       209 ~~~y~~~k~~~e~--------------~~~~~ilRp~~i~G~~  237 (250)
                      ...|++.|...+.              +++++.+.||.+-.+.
T Consensus       139 ~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~  181 (235)
T d1ooea_         139 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM  181 (235)
T ss_dssp             BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence            3678888844332              4678999999997764

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.41  E-value=1.4e-13  Score=115.35  Aligned_cols=154  Identities=14%  Similarity=0.126  Sum_probs=99.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      -++|++|||    ||++.||++++++|+++|++|++++|+.+...+..+.    +.......+..+.+|   ++++.+++
T Consensus         7 l~gK~alIT----Gas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~g~~~~~~~~Dv~~~~~v~~~~   78 (260)
T d1h5qa_           7 FVNKTIIVT----GGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEK----VGKEFGVKTKAYQCDVSNTDIVTKTI   78 (260)
T ss_dssp             CTTEEEEEE----TTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHH----HHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHHHhCCceEEEEccCCCHHHHHHHH
Confidence            357999999    9999999999999999999999999998765432211    111123345566666   66666666


Q ss_pred             cC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHh-CCCCEEEEEcCcccccCCCCCC
Q 025587          149 GG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKS-SGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~-~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      +.     .++|++||+||.                    |+.+    ++.++..+.+ .+.++++.+++...+.......
T Consensus        79 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~  158 (260)
T d1h5qa_          79 QQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  158 (260)
T ss_dssp             HHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc
Confidence            32     259999999982                    3333    4445555543 4455677777655443221100


Q ss_pred             ccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                           ...+....|.+.|..            .+.+++++.|.||.|-.+..
T Consensus       159 -----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~  205 (260)
T d1h5qa_         159 -----NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT  205 (260)
T ss_dssp             -----TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             -----ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch
Confidence                 001123568877733            33479999999999977653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.41  E-value=1e-12  Score=109.05  Aligned_cols=148  Identities=15%  Similarity=0.110  Sum_probs=98.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh---CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ||+||||    ||+++||++++++|++   +|++|++.+|++++.+.+.+.     . ....++.++.+|   +++++++
T Consensus         2 MKtilIT----Gas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~~Dvs~~~~v~~~   71 (248)
T d1snya_           2 MNSILIT----GCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDL-----A-KNHSNIHILEIDLRNFDAYDKL   71 (248)
T ss_dssp             CSEEEES----CCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHH-----H-HHCTTEEEEECCTTCGGGHHHH
T ss_pred             cCEEEEe----CCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-----H-hcCCcEEEEEEEeccHHHHHHH
Confidence            5799999    9999999999999974   699999999998776543210     0 123456667776   5555544


Q ss_pred             hc-------CCcccEEEeCCCc---------------------CHHh----HHHHHHHHHhC-----------CCCEEEE
Q 025587          148 VG-------GVTFDVVLDNNGK---------------------NLDA----VRPVADWAKSS-----------GVKQFLF  184 (250)
Q Consensus       148 l~-------~~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~-----------~~~~~v~  184 (250)
                      ++       ..++|++|++||+                     |+.+    ++.++..+++.           +.+++|+
T Consensus        72 ~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~  151 (248)
T d1snya_          72 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  151 (248)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence            33       2359999999982                     3333    44455555442           3578999


Q ss_pred             EcCcccccCCCCCCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCCC
Q 025587          185 ISSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNNK  240 (250)
Q Consensus       185 iSS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~~  240 (250)
                      ++|...+-.  ..       ..+....|+++|..            .+.+++++.|.||.|-.+....
T Consensus       152 i~S~~g~~~--~~-------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~  210 (248)
T d1snya_         152 MSSILGSIQ--GN-------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  210 (248)
T ss_dssp             ECCGGGCST--TC-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             ccccccccC--CC-------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccc
Confidence            999652211  10       11112568888732            2337999999999998886543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=3.1e-13  Score=112.78  Aligned_cols=146  Identities=15%  Similarity=0.124  Sum_probs=91.9

Q ss_pred             ccCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~  146 (250)
                      -++|++|||    ||+|  .||++++++|+++|++|++.+|+++..+...+     .. ........+.+|   ++++++
T Consensus         6 L~gK~alIT----Gas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~v~~   75 (256)
T d1ulua_           6 LSGKKALVM----GVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-----LA-EALGGALLFRADVTQDEELDA   75 (256)
T ss_dssp             CTTCEEEEE----SCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----HH-HHTTCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-----hh-hccCcccccccccCCHHHHHH
Confidence            357899999    9988  79999999999999999988887533221100     00 111234455555   666666


Q ss_pred             hhcC-----CcccEEEeCCCc------------------------CHHhHHHHHHHHHhC--CCCEEEEEcCcccccCCC
Q 025587          147 VVGG-----VTFDVVLDNNGK------------------------NLDAVRPVADWAKSS--GVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       147 ~l~~-----~~~d~Vi~~ag~------------------------~~~~~~~ll~~~~~~--~~~~~v~iSS~~vy~~~~  195 (250)
                      +++.     .++|++||+||.                        |+.+...+..++...  .-+++|++||........
T Consensus        76 ~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~  155 (256)
T d1ulua_          76 LFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP  155 (256)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC
Confidence            6542     259999999982                        233344444444331  135799999977543322


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~~  239 (250)
                      .            ...|++.|...            ..+++++.|.||.+..+...
T Consensus       156 ~------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~  199 (256)
T d1ulua_         156 K------------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAAR  199 (256)
T ss_dssp             T------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------
T ss_pred             C------------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecccc
Confidence            2            26688887432            33799999999999887543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4.5e-13  Score=112.11  Aligned_cols=147  Identities=16%  Similarity=0.134  Sum_probs=97.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccch-hcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEI-VSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~v~~v~~D---~~~l~~~  147 (250)
                      -++|+||||    ||++.||++++++|+++|++|++.+|+.+..+++.++    +... ....+..+.+|   ++++.++
T Consensus         8 lk~Kv~lIT----Gas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~----l~~~~~~~~~~~~~~Dls~~~~v~~~   79 (257)
T d1xg5a_           8 WRDRLALVT----GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAE----CKSAGYPGTLIPYRCDLSNEEDILSM   79 (257)
T ss_dssp             GTTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HHhcCCCceEEEEEccCCCHHHHHHH
Confidence            457899999    9999999999999999999999999987665543211    0000 11234555666   6666666


Q ss_pred             hcC-----CcccEEEeCCCc--------------------CHHh----HHHHHHHHHhCC--CCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGK--------------------NLDA----VRPVADWAKSSG--VKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~~~--~~~~v~iSS~~vy~~~~~  196 (250)
                      ++.     .++|++||+||.                    |+.+    ++.++..+++.+  -+++|++||...+.....
T Consensus        80 v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~  159 (257)
T d1xg5a_          80 FSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL  159 (257)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC
T ss_pred             HHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC
Confidence            542     259999999992                    2333    445566555544  479999999775432111


Q ss_pred             CCccCCCCCCCCCChhHHHHHH---------HH-----hCCcEEEEecCeeecC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYI---------SE-----NFSNWASFRPQYMIGS  236 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~---------~e-----~~~~~~ilRp~~i~G~  236 (250)
                                +....|++.|..         .|     .+++++.|.||.+-.+
T Consensus       160 ----------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         160 ----------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             ----------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence                      012457766622         22     3589999999988655

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=6.4e-13  Score=111.74  Aligned_cols=145  Identities=17%  Similarity=0.097  Sum_probs=96.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      -++|++|||    ||+++||++++++|+++|++|++++|+.+.+++..+.    ........+..+..|   .+.+...+
T Consensus        12 L~GK~alIT----GassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~   83 (269)
T d1xu9a_          12 LQGKKVIVT----GASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSH----CLELGAASAHYIAGTMEDMTFAEQFV   83 (269)
T ss_dssp             GTTCEEEES----SCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEe----CCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----HhhhhcccchhhhhhhhhHHHHHHHH
Confidence            457999999    9999999999999999999999999998766543211    011122334455555   33333222


Q ss_pred             cC-----CcccEEEeCCCc--------------------C----HHhHHHHHHHHHhCCCCEEEEEcCcccccCCCCCCc
Q 025587          149 GG-----VTFDVVLDNNGK--------------------N----LDAVRPVADWAKSSGVKQFLFISSAGIYKPADEPPH  199 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag~--------------------~----~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~~  199 (250)
                      ..     ..+|++++++|.                    |    +..++.++..+++. -+++|++||...+.+...   
T Consensus        84 ~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~---  159 (269)
T d1xu9a_          84 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPM---  159 (269)
T ss_dssp             HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTT---
T ss_pred             HHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCC---
Confidence            11     248999999982                    2    23466666777653 368999999775433222   


Q ss_pred             cCCCCCCCCCChhHHHHHHHHh--------------CCcEEEEecCeeecCC
Q 025587          200 VEGDVVKPDAGHVQVEKYISEN--------------FSNWASFRPQYMIGSG  237 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~e~--------------~~~~~ilRp~~i~G~~  237 (250)
                               ...|+++|...+.              +++++.+.||.|-.+.
T Consensus       160 ---------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~  202 (269)
T d1xu9a_         160 ---------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET  202 (269)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH
T ss_pred             ---------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH
Confidence                     3678888833322              4888999999997653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.38  E-value=1.5e-13  Score=113.94  Aligned_cols=141  Identities=16%  Similarity=0.113  Sum_probs=93.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ++|++|||    ||++.||++++++|+++|++|++.+|+.+..++..++        ....+..+.+|   +++++++++
T Consensus         4 ~gK~alIt----Gas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~Dls~~~~i~~~~~   71 (241)
T d2a4ka1           4 SGKTILVT----GAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--------LEAEAIAVVADVSDPKAVEAVFA   71 (241)
T ss_dssp             TTCEEEEE----STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------CCSSEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------cCCceEEEEecCCCHHHHHHHHH
Confidence            47899999    9999999999999999999999999988655432211        12345566666   666766654


Q ss_pred             C-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCccCC
Q 025587          150 G-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHVEG  202 (250)
Q Consensus       150 ~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~e~  202 (250)
                      .     .++|++||+||                    +|+.+...+.+++..  .+-+.++++|+.+....+        
T Consensus        72 ~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~--------  143 (241)
T d2a4ka1          72 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF--------  143 (241)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH--------
T ss_pred             HHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc--------
Confidence            2     25999999998                    244455555555433  223456666654422111        


Q ss_pred             CCCCCCCChhHHHHH------------HHHhCCcEEEEecCeeecCCC
Q 025587          203 DVVKPDAGHVQVEKY------------ISENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       203 ~~~~~~~~~y~~~k~------------~~e~~~~~~ilRp~~i~G~~~  238 (250)
                           ....|++.|.            +...+++++.|.||.+-.+..
T Consensus       144 -----~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~  186 (241)
T d2a4ka1         144 -----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT  186 (241)
T ss_dssp             -----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG
T ss_pred             -----CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH
Confidence                 1134554442            223369999999999976643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.5e-12  Score=110.38  Aligned_cols=145  Identities=16%  Similarity=0.058  Sum_probs=95.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc---CCCccccCCCCCCCcccch--hcCCceEEeCC---HHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV---GDENSDKMKKPPFNRFNEI--VSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R---~~~~~~~~~~~~~~~~~~~--~~~~v~~v~~D---~~~l~  145 (250)
                      +|.||||    ||+++||++++++|+++|.+|+.+.+   +.+..+.+.+.    ..++  ....+..+.+|   .+++.
T Consensus         2 kkVvlIT----GassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~Dv~~~~~~~   73 (285)
T d1jtva_           2 RTVVLIT----GCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEA----ARALACPPGSLETLQLDVRDSKSVA   73 (285)
T ss_dssp             CEEEEES----CCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHH----HHHTTCCTTSEEEEECCTTCHHHHH
T ss_pred             CCEEEEc----cCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHH----HHHHhccCCceEEEeccccchHhhh
Confidence            4667999    99999999999999999988666654   32222211000    0001  12345566666   66666


Q ss_pred             hhhcC---CcccEEEeCCC--------------------cCHH----hHHHHHHHHHhCCCCEEEEEcCcccccCCCCCC
Q 025587          146 NVVGG---VTFDVVLDNNG--------------------KNLD----AVRPVADWAKSSGVKQFLFISSAGIYKPADEPP  198 (250)
Q Consensus       146 ~~l~~---~~~d~Vi~~ag--------------------~~~~----~~~~ll~~~~~~~~~~~v~iSS~~vy~~~~~~~  198 (250)
                      ++++.   ..+|++++++|                    +|+.    .++.++..+++.+-+++|++||.....+..   
T Consensus        74 ~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~---  150 (285)
T d1jtva_          74 AARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP---  150 (285)
T ss_dssp             HHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT---
T ss_pred             hhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCC---
Confidence            66532   36999999998                    2344    366666777777778999999986543322   


Q ss_pred             ccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          199 HVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       199 ~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                               ....|+++|...            ..+++++.|.||.|-.+..
T Consensus       151 ---------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~  193 (285)
T d1jtva_         151 ---------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFM  193 (285)
T ss_dssp             ---------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHH
Confidence                     136799888433            2379999999999987654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.36  E-value=8.7e-13  Score=112.06  Aligned_cols=148  Identities=15%  Similarity=0.103  Sum_probs=94.0

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .-++|++|||    ||+|+||++++++|+++|++|++++|+.+..++..+.    +.......+..+.+|   .+++.++
T Consensus        22 ~l~gK~alIT----Gas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~----l~~~~g~~~~~~~~D~~~~~~v~~~   93 (294)
T d1w6ua_          22 SFQGKVAFIT----GGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ----ISSQTGNKVHAIQCDVRDPDMVQNT   93 (294)
T ss_dssp             TTTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----HHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----HHHhcCCceEEEEecccChHHHHHH
Confidence            3457999999    9999999999999999999999999987654432111    111123345566666   5665555


Q ss_pred             hc-----CCcccEEEeCCCc--------------------CHHh----HHHHHHHHHh-CCCCEEEEEcCcccccCCCCC
Q 025587          148 VG-----GVTFDVVLDNNGK--------------------NLDA----VRPVADWAKS-SGVKQFLFISSAGIYKPADEP  197 (250)
Q Consensus       148 l~-----~~~~d~Vi~~ag~--------------------~~~~----~~~ll~~~~~-~~~~~~v~iSS~~vy~~~~~~  197 (250)
                      ++     ...+|++||++|.                    |...    ....+..+.. .+...++.+++......... 
T Consensus        94 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~-  172 (294)
T d1w6ua_          94 VSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF-  172 (294)
T ss_dssp             HHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT-
T ss_pred             hhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc-
Confidence            43     2359999999992                    1222    2222222222 34556777777654433222 


Q ss_pred             CccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCC
Q 025587          198 PHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       198 ~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~  238 (250)
                                 ...|.+.|..            ...+++++.|.||.|..+..
T Consensus       173 -----------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~  214 (294)
T d1w6ua_         173 -----------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA  214 (294)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---
T ss_pred             -----------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchh
Confidence                       2568877732            23379999999999987753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.5e-12  Score=106.56  Aligned_cols=144  Identities=13%  Similarity=0.091  Sum_probs=93.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l  148 (250)
                      -++|.+|||    ||++.||++++++|+++|++|++++|+.+..+...+.        ..........   |.+++++..
T Consensus         3 lkGKvalIT----Gas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~   70 (248)
T d2o23a1           3 VKGLVAVIT----GGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK--------LGNNCVFAPADVTSEKDVQTAL   70 (248)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH--------HCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------hCCCcccccccccccccccccc
Confidence            367999999    9999999999999999999999999998766543211        1223333333   333333332


Q ss_pred             c-----CCcccEEEeCCC--------------------------cCHHhHHHHHHHHHh----------CCCCEEEEEcC
Q 025587          149 G-----GVTFDVVLDNNG--------------------------KNLDAVRPVADWAKS----------SGVKQFLFISS  187 (250)
Q Consensus       149 ~-----~~~~d~Vi~~ag--------------------------~~~~~~~~ll~~~~~----------~~~~~~v~iSS  187 (250)
                      .     ....|.++++++                          +|+.++..+..++..          .+.++||++||
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  150 (248)
T d2o23a1          71 ALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  150 (248)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             cccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecc
Confidence            1     123688887765                          234444454444422          13458999999


Q ss_pred             cccccCCCCCCccCCCCCCCCCChhHHHHHHHH------------hCCcEEEEecCeeecCCCC
Q 025587          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE------------NFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e------------~~~~~~ilRp~~i~G~~~~  239 (250)
                      ...+.+...            ...|++.|...+            .+++++.|.||.+..+...
T Consensus       151 ~~~~~~~~~------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~  202 (248)
T d2o23a1         151 VAAFEGQVG------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT  202 (248)
T ss_dssp             THHHHCCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---
T ss_pred             hhhccCCCC------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh
Confidence            876654322            266888874333            3699999999999887644

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.34  E-value=7.7e-12  Score=103.79  Aligned_cols=148  Identities=14%  Similarity=0.153  Sum_probs=92.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+||||    ||+++||++++++|+++|+  .|++..|+.+..+++.+.        ...++.++.+|   .+++++++
T Consensus         3 ~KtilIT----GassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~--------~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           3 PGSVVVT----GANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--------KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CSEEEES----SCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh--------hCCceEEEEEecCCHHHHHHHH
Confidence            4899999    9999999999999999995  688888988776654332        23456666666   55554443


Q ss_pred             c-------CCcccEEEeCCCc---------------------CHHh----HHHHHHHHHhC-----------CCCEEEEE
Q 025587          149 G-------GVTFDVVLDNNGK---------------------NLDA----VRPVADWAKSS-----------GVKQFLFI  185 (250)
Q Consensus       149 ~-------~~~~d~Vi~~ag~---------------------~~~~----~~~ll~~~~~~-----------~~~~~v~i  185 (250)
                      +       ...+|++|+|||+                     |+.+    ++.++..+++.           ...+++.+
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~  150 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccc
Confidence            2       2248999999992                     3444    44445555442           12567887


Q ss_pred             cCcccccCCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          186 SSAGIYKPADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       186 SS~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                      ++...+......    .....+ ...|+++|...            +.+++++.+.||.|-.+..
T Consensus       151 s~~~~~~~~~~~----~~~~~~-~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~  210 (250)
T d1yo6a1         151 SSGLGSITDNTS----GSAQFP-VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG  210 (250)
T ss_dssp             CCGGGCSTTCCS----TTSSSC-BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred             ccccccccCCcc----cccchh-HHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC
Confidence            775443322111    011111 24588887333            3369999999999977653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=6.7e-13  Score=110.96  Aligned_cols=145  Identities=17%  Similarity=0.121  Sum_probs=98.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHh---CCCeEEEEEcCCCccccCCCCCCCcccc-hhcCCceEEeCC---HHHHH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLG---SGHEVTIMTVGDENSDKMKKPPFNRFNE-IVSAGGKTVWGD---PAEVG  145 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~---~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~v~~v~~D---~~~l~  145 (250)
                      .+|.++||    ||+++||++++++|++   +|++|++++|+.+.++++.+.    +.. .....+..+.+|   ++++.
T Consensus         5 ~gKvalIT----Gas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~----l~~~~~~~~~~~~~~Dvs~~~~v~   76 (259)
T d1oaaa_           5 GCAVCVLT----GASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEE----LGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEES----SCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHH----HHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCCEEEEe----CCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHH----HHhhcCCceEEEEEccCCCHHHHH
Confidence            56889999    9999999999999975   799999999988766543211    000 012235566666   66666


Q ss_pred             hhhc---------CCcccEEEeCCC-----------------------cCHHhHHHHHHHHHh----CC--CCEEEEEcC
Q 025587          146 NVVG---------GVTFDVVLDNNG-----------------------KNLDAVRPVADWAKS----SG--VKQFLFISS  187 (250)
Q Consensus       146 ~~l~---------~~~~d~Vi~~ag-----------------------~~~~~~~~ll~~~~~----~~--~~~~v~iSS  187 (250)
                      ++++         ...+|++|+++|                       +|+.+...+.+++..    .+  .+++|++||
T Consensus        77 ~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS  156 (259)
T d1oaaa_          77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence            5542         235789999987                       244555555555443    32  358999999


Q ss_pred             cccccCCCCCCccCCCCCCCCCChhHHHHHHHH----------hCCcEEEEecCeeecCC
Q 025587          188 AGIYKPADEPPHVEGDVVKPDAGHVQVEKYISE----------NFSNWASFRPQYMIGSG  237 (250)
Q Consensus       188 ~~vy~~~~~~~~~e~~~~~~~~~~y~~~k~~~e----------~~~~~~ilRp~~i~G~~  237 (250)
                      ...+.+...            ...|+++|...+          .+++++.|.||.|..+.
T Consensus       157 ~~~~~~~~~------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~  204 (259)
T d1oaaa_         157 LCALQPYKG------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM  204 (259)
T ss_dssp             GGGTSCCTT------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred             ccccCCCcc------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH
Confidence            775543222            367888884433          26999999999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.32  E-value=3.2e-12  Score=107.50  Aligned_cols=145  Identities=17%  Similarity=0.107  Sum_probs=93.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      -++|++|||    ||++.||++++++|+++|++|++++|+.+. .+...+.    + ......+..+.+|   ++++.+.
T Consensus        16 L~gK~~lIT----Gas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~----~-~~~g~~~~~~~~D~~~~~~v~~~   86 (272)
T d1g0oa_          16 LEGKVALVT----GAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAA----I-KKNGSDAACVKANVGVVEDIVRM   86 (272)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHH----H-HhhCCceeeEeCCCCCHHHHHHH
Confidence            357999999    999999999999999999999999987532 2221100    0 0112345566666   6666666


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCCCCCcc
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGIYKPADEPPHV  200 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~~~~~~  200 (250)
                      ++.     ..+|++|+++|                    .|+.+...+.+++..  ..-+++++++|.......      
T Consensus        87 ~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~------  160 (272)
T d1g0oa_          87 FEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA------  160 (272)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS------
T ss_pred             HHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc------
Confidence            542     25899999999                    244555555555443  123577888775422111      


Q ss_pred             CCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          201 EGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       201 e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                           .+....|++.|...            ..+++++.|.||.+-.+
T Consensus       161 -----~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~  203 (272)
T d1g0oa_         161 -----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  203 (272)
T ss_dssp             -----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence                 11125677776332            33799999999999755

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.32  E-value=1.3e-12  Score=109.33  Aligned_cols=144  Identities=19%  Similarity=0.145  Sum_probs=90.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc-cccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN-SDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      -.+|+||||    ||++.||++++++|+++|++|++..|+.+. .+...+.    + .-...++..+.+|   ++++.++
T Consensus         4 L~GK~alIT----Gas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~----~-~~~g~~~~~~~~D~~~~~~v~~~   74 (259)
T d1ja9a_           4 LAGKVALTT----GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAE----L-KKLGAQGVAIQADISKPSEVVAL   74 (259)
T ss_dssp             TTTCEEEET----TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----H-HHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHH----H-HHcCCCceEecCCCCCHHHHHHH
Confidence            357899999    999999999999999999999987766533 2221110    0 0112345566666   6666665


Q ss_pred             hcC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCc-ccccCCCCCCc
Q 025587          148 VGG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSA-GIYKPADEPPH  199 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~-~vy~~~~~~~~  199 (250)
                      ++.     ..+|++||++|                    .|+.+...+++++.+  ..-++++.++|. +.+....    
T Consensus        75 ~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~----  150 (259)
T d1ja9a_          75 FDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP----  150 (259)
T ss_dssp             HHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----
T ss_pred             HHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC----
Confidence            532     25999999999                    234444444444433  112356666654 3222111    


Q ss_pred             cCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecC
Q 025587          200 VEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGS  236 (250)
Q Consensus       200 ~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~  236 (250)
                              ....|.+.|...            ..+++++.|.||.+-.+
T Consensus       151 --------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~  191 (259)
T d1ja9a_         151 --------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  191 (259)
T ss_dssp             --------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccCh
Confidence                    125688777322            23799999999999754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.8e-12  Score=107.99  Aligned_cols=108  Identities=17%  Similarity=0.156  Sum_probs=73.3

Q ss_pred             CcEE-EEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhh
Q 025587           74 KKKV-LIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVV  148 (250)
Q Consensus        74 ~~~V-lVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l  148 (250)
                      +|+| |||    ||+++||++++++|+++ |++|++.+|+.++.+...+.    +. -....+.++.+|   .+++++++
T Consensus         2 g~rVAlVT----Gas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~----l~-~~~~~~~~~~~Dvs~~~sv~~~~   72 (275)
T d1wmaa1           2 GIHVALVT----GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ----LQ-AEGLSPRFHQLDIDDLQSIRALR   72 (275)
T ss_dssp             CCCEEEES----SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH----HH-HTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCeEEEEC----CCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH----HH-hcCCcEEEEEEecCCHHHHHHHH
Confidence            3555 999    99999999999999986 89999999998665432111    00 112345666666   55555544


Q ss_pred             cC-----CcccEEEeCCC--------------------cCHHhHHHHHHHHHh--CCCCEEEEEcCccc
Q 025587          149 GG-----VTFDVVLDNNG--------------------KNLDAVRPVADWAKS--SGVKQFLFISSAGI  190 (250)
Q Consensus       149 ~~-----~~~d~Vi~~ag--------------------~~~~~~~~ll~~~~~--~~~~~~v~iSS~~v  190 (250)
                      +.     .++|++|||||                    +|+.++..+.+.+..  ..-+++|++||...
T Consensus        73 ~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~  141 (275)
T d1wmaa1          73 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS  141 (275)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH
T ss_pred             HHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccce
Confidence            32     25999999999                    245566666666544  12358999999643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.21  E-value=2e-11  Score=99.94  Aligned_cols=132  Identities=17%  Similarity=0.107  Sum_probs=83.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh---
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV---  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~---  147 (250)
                      .|++|||    ||++.||++++++|+++|++|++.+|+++..+.                 ....+|   .....++   
T Consensus         1 DK~alIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-----------------~~~~~d~~~~~~~~~~~~~   59 (241)
T d1uaya_           1 ERSALVT----GGASGLGRAAALALKARGYRVVVLDLRREGEDL-----------------IYVEGDVTREEDVRRAVAR   59 (241)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSS-----------------EEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCcccccc-----------------eEeeccccchhhhHHHHHh
Confidence            3799999    999999999999999999999999998754332                 122222   2222222   


Q ss_pred             -hcCCcccEEEeCCC------------------------cCHHh----HHHHHHHHH------hCCCCEEEEEcCccccc
Q 025587          148 -VGGVTFDVVLDNNG------------------------KNLDA----VRPVADWAK------SSGVKQFLFISSAGIYK  192 (250)
Q Consensus       148 -l~~~~~d~Vi~~ag------------------------~~~~~----~~~ll~~~~------~~~~~~~v~iSS~~vy~  192 (250)
                       ......+.++.+++                        .|+.+    ++.++..+.      +.+..++|++||...+.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~  139 (241)
T d1uaya_          60 AQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE  139 (241)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH
T ss_pred             hhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc
Confidence             11222455555544                        12222    233333322      23456899999987654


Q ss_pred             CCCCCCccCCCCCCCCCChhHHHHHHH------------HhCCcEEEEecCeeecCCC
Q 025587          193 PADEPPHVEGDVVKPDAGHVQVEKYIS------------ENFSNWASFRPQYMIGSGN  238 (250)
Q Consensus       193 ~~~~~~~~e~~~~~~~~~~y~~~k~~~------------e~~~~~~ilRp~~i~G~~~  238 (250)
                      +...            ...|++.|...            ..+++++.|.||.+..+..
T Consensus       140 ~~~~------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~  185 (241)
T d1uaya_         140 GQIG------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL  185 (241)
T ss_dssp             CCTT------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH
T ss_pred             CCCC------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccccc
Confidence            4322            26788887332            3379999999999977643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.21  E-value=2.8e-11  Score=100.44  Aligned_cols=145  Identities=14%  Similarity=0.115  Sum_probs=89.9

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|+||||    ||+|  .||+++++.|+++|++|++.+|+++..+...+.     . ........+..|   .+++.+.
T Consensus         4 ~gK~~lIT----Gass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~   73 (258)
T d1qsga_           4 SGKRILVT----GVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF-----A-AQLGSDIVLQCDVAEDASIDTM   73 (258)
T ss_dssp             TTCEEEEC----CCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHH-----H-HHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-----H-hhcCCcceeecccchHHHHHHH
Confidence            47899999    9998  799999999999999999999986433221100     0 011122333333   3333333


Q ss_pred             h----c-CCcccEEEeCCCc-------------------------CHHhHHHHHHHHHh--CCCCEEEEEcCcccccCCC
Q 025587          148 V----G-GVTFDVVLDNNGK-------------------------NLDAVRPVADWAKS--SGVKQFLFISSAGIYKPAD  195 (250)
Q Consensus       148 l----~-~~~~d~Vi~~ag~-------------------------~~~~~~~ll~~~~~--~~~~~~v~iSS~~vy~~~~  195 (250)
                      +    . ...+|++||+++.                         +......+..++..  .+-+.+|++||.+...+..
T Consensus        74 ~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~  153 (258)
T d1qsga_          74 FAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP  153 (258)
T ss_dssp             HHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT
T ss_pred             HHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC
Confidence            2    2 2358999999872                         12233333444333  2234688888876433221


Q ss_pred             CCCccCCCCCCCCCChhHHHHHHHHh------------CCcEEEEecCeeecCCCC
Q 025587          196 EPPHVEGDVVKPDAGHVQVEKYISEN------------FSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       196 ~~~~~e~~~~~~~~~~y~~~k~~~e~------------~~~~~ilRp~~i~G~~~~  239 (250)
                      .            ...|.+.|...+.            +++++.|+||.|..+...
T Consensus       154 ~------------~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~  197 (258)
T d1qsga_         154 N------------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  197 (258)
T ss_dssp             T------------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGG
T ss_pred             C------------cHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccc
Confidence            1            2568888743332            699999999999888654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.12  E-value=1.5e-10  Score=96.76  Aligned_cols=145  Identities=12%  Similarity=0.088  Sum_probs=86.1

Q ss_pred             cCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      ++|++|||    ||+|  .||++++++|+++|++|++++|+++..+...+     +. .......++..|   .+++.++
T Consensus         4 ~gK~alIT----Gaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~-----l~-~~~~~~~~~~~d~~~~~~~~~~   73 (274)
T d2pd4a1           4 KGKKGLIV----GVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP-----IA-QELNSPYVYELDVSKEEHFKSL   73 (274)
T ss_dssp             TTCEEEEE----CCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHH-----HH-HHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEEE----CCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----HH-hhCCceeEeeecccchhhHHHH
Confidence            47899999    9877  79999999999999999999998532221110     00 011223344444   4444444


Q ss_pred             hcC-----CcccEEEeCCCcC------------------------HHhHHHHHHHHHh-CC-CCEEEEEcCcccccCCCC
Q 025587          148 VGG-----VTFDVVLDNNGKN------------------------LDAVRPVADWAKS-SG-VKQFLFISSAGIYKPADE  196 (250)
Q Consensus       148 l~~-----~~~d~Vi~~ag~~------------------------~~~~~~ll~~~~~-~~-~~~~v~iSS~~vy~~~~~  196 (250)
                      +..     ..+|++|+++|..                        ..........+.+ .+ ...++.+|+.+.......
T Consensus        74 ~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~  153 (274)
T d2pd4a1          74 YNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH  153 (274)
T ss_dssp             HHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred             HHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc
Confidence            321     2599999999821                        1122333333322 22 224566666554433222


Q ss_pred             CCccCCCCCCCCCChhHHHHHH------------HHhCCcEEEEecCeeecCCCC
Q 025587          197 PPHVEGDVVKPDAGHVQVEKYI------------SENFSNWASFRPQYMIGSGNN  239 (250)
Q Consensus       197 ~~~~e~~~~~~~~~~y~~~k~~------------~e~~~~~~ilRp~~i~G~~~~  239 (250)
                                  ...|++.|..            ...+++++.|.||.+..+...
T Consensus       154 ------------~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~  196 (274)
T d2pd4a1         154 ------------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS  196 (274)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred             ------------chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccc
Confidence                        1456666632            233799999999999887654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.01  E-value=9.9e-10  Score=91.18  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=52.2

Q ss_pred             cCcEEEEEecCCCcc--hhhHHHHHHHHHhCCCeEEEEEcCCCccc-cCCCCCCCcccchhcCCceEEeCC---HHHH--
Q 025587           73 EKKKVLIVNTNSGGH--AVIGFYLAKELLGSGHEVTIMTVGDENSD-KMKKPPFNRFNEIVSAGGKTVWGD---PAEV--  144 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt--G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~-~~~~~~~~~~~~~~~~~v~~v~~D---~~~l--  144 (250)
                      ++|+||||    ||+  .+||++++++|+++|++|++..|+.++.. .+.+        ........+.+|   .+++  
T Consensus         5 ~gK~~lIt----Gaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--------~~~~~~~~~~~dv~~~~~~~~   72 (268)
T d2h7ma1           5 DGKRILVS----GIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--------RLPAKAPLLELDVQNEEHLAS   72 (268)
T ss_dssp             TTCEEEEC----CCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--------TSSSCCCEEECCTTCHHHHHH
T ss_pred             CCCEEEEE----CCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--------HcCCceeeEeeeccccccccc
Confidence            46899999    965  46999999999999999999999875432 1111        122334455555   3333  


Q ss_pred             -----HhhhcC-CcccEEEeCCC
Q 025587          145 -----GNVVGG-VTFDVVLDNNG  161 (250)
Q Consensus       145 -----~~~l~~-~~~d~Vi~~ag  161 (250)
                           .+.+.. ..+|+++|++|
T Consensus        73 ~~~~v~~~~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          73 LAGRVTEAIGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCC
T ss_pred             ccchhhhccccCCCcceeeeccc
Confidence                 333332 25899999998

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.98  E-value=9.9e-10  Score=91.86  Aligned_cols=34  Identities=21%  Similarity=0.256  Sum_probs=31.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..+|||    ||++.||++++++|+++|++|++.+|+.
T Consensus         3 pVAlIT----Gas~GIG~aiA~~la~~Ga~V~i~~~~~   36 (284)
T d1e7wa_           3 PVALVT----GAAKRLGRSIAEGLHAEGYAVCLHYHRS   36 (284)
T ss_dssp             CEEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CEEEEe----CCCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence            368999    9999999999999999999999988765

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.94  E-value=7.3e-10  Score=91.73  Aligned_cols=35  Identities=29%  Similarity=0.386  Sum_probs=32.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      .+|||    ||++.||++++++|+++|++|++++|+.++
T Consensus         3 vAlVT----Gas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVIT----GGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEET----TCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            68999    999999999999999999999999998754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.86  E-value=7.6e-10  Score=87.93  Aligned_cols=81  Identities=20%  Similarity=0.237  Sum_probs=62.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhc-CCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVS-AGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~-~~v~~v~~D~~~l~~~l~~  150 (250)
                      -.+|+||||    ||+|+||+.++++|+++|++|++++|+.++.+++.+.    +.+... .....+..|.+++.+++++
T Consensus        21 l~gK~vlIt----GasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~   92 (191)
T d1luaa1          21 VKGKKAVVL----AGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS----VNKRFKVNVTAAETADDASRAEAVKG   92 (191)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----HHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCCEEEEE----CCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHH----HHhccchhhhhhhcccHHHHHHHhcC
Confidence            367999999    9999999999999999999999999998765543211    111111 1233556678999999987


Q ss_pred             CcccEEEeCCCc
Q 025587          151 VTFDVVLDNNGK  162 (250)
Q Consensus       151 ~~~d~Vi~~ag~  162 (250)
                        +|+|||++|.
T Consensus        93 --iDilin~Ag~  102 (191)
T d1luaa1          93 --AHFVFTAGAI  102 (191)
T ss_dssp             --CSEEEECCCT
T ss_pred             --cCeeeecCcc
Confidence              7999999984

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.84  E-value=1.8e-08  Score=84.61  Aligned_cols=37  Identities=27%  Similarity=0.307  Sum_probs=33.0

Q ss_pred             ccCcEEEEEecCCCcch--hhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           72 AEKKKVLIVNTNSGGHA--VIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG--~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -++|++|||    ||+|  .||++++++|+++|++|++.+|++
T Consensus         6 L~gK~alVT----Gass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           6 LRGKRAFIA----GIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CTTCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCCCEEEEE----CCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            357899999    9877  899999999999999999998753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.81  E-value=2e-08  Score=82.51  Aligned_cols=36  Identities=25%  Similarity=0.336  Sum_probs=33.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ||.||||    ||++.||++++++|+++|++|++++|+++
T Consensus         1 mkVvlIT----Gas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           1 MSIIVIS----GCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             CCEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEe----CCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            4788999    99999999999999999999999998764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.71  E-value=2.6e-08  Score=85.31  Aligned_cols=35  Identities=20%  Similarity=0.199  Sum_probs=30.6

Q ss_pred             CcEEEEEecCCC--cchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSG--GHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~G--gtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .|.+|||    |  ++..||+++++.|+++|.+|++..++.
T Consensus         2 ~kVAlIT----Gaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIA----GIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEE----CCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CcEEEEe----CCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            5788999    8  557999999999999999999987654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.33  E-value=1.2e-06  Score=64.63  Aligned_cols=93  Identities=20%  Similarity=0.298  Sum_probs=66.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |+|+|+    |+ |.+|+.+++.|.++|++|++++++++..+.+.          ...++.++.+|   ++.+.++- -.
T Consensus         1 M~IvI~----G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----------~~~~~~vi~Gd~~~~~~l~~~~-i~   64 (132)
T d1lssa_           1 MYIIIA----GI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKAS----------AEIDALVINGDCTKIKTLEDAG-IE   64 (132)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----------HHCSSEEEESCTTSHHHHHHTT-TT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhh----------hhhhhhhccCcccchhhhhhcC-hh
Confidence            689999    75 99999999999999999999999886554321          12267788888   55565552 22


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      ..|+++-+...+ .....+...+++.+.+++|-
T Consensus        65 ~a~~vv~~t~~d-~~N~~~~~~~k~~~~~~iI~   96 (132)
T d1lssa_          65 DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIA   96 (132)
T ss_dssp             TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEE
T ss_pred             hhhhhcccCCcH-HHHHHHHHHHHHcCCceEEE
Confidence            478888876643 22333445667788877763

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.28  E-value=1.9e-06  Score=63.44  Aligned_cols=94  Identities=20%  Similarity=0.289  Sum_probs=68.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhh-hcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNV-VGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~-l~~  150 (250)
                      |+++|.    | .|.+|++++++|.++|++|++++.+++..+.+..           .+...+.+|   ++.+.++ +..
T Consensus         1 k~~iIi----G-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----------~~~~~~~gd~~~~~~l~~a~i~~   64 (134)
T d2hmva1           1 KQFAVI----G-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------YATHAVIANATEENELLSLGIRN   64 (134)
T ss_dssp             CCEEEE----C-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----------TCSEEEECCTTCTTHHHHHTGGG
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----------hCCcceeeecccchhhhccCCcc
Confidence            578999    6 5999999999999999999999999877665432           244566676   6666665 333


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                        .|.||-..+.+......+...++..+.+++|--.
T Consensus        65 --a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          65 --FEYVIVAIGANIQASTLTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             --CSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             --ccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeec
Confidence              7888888776665555556666677777766433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.95  E-value=4.2e-06  Score=63.92  Aligned_cols=91  Identities=20%  Similarity=0.138  Sum_probs=58.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      .|+|+|+    |+ |++|+++++.|.++||+|++++|+.+....+.+.-         ........   +.......+..
T Consensus         2 ~K~Ilii----Ga-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------~~~~~~~~~~~~~~~~~~~i~~   67 (182)
T d1e5qa1           2 TKSVLML----GS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------QHSTPISLDVNDDAALDAEVAK   67 (182)
T ss_dssp             CCEEEEE----CC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------TTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------cccccccccccchhhhHhhhhc
Confidence            4899999    76 99999999999999999999999987776553321         11112222   25555666665


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                        .|.++.+...+  ....++..+.+.+. +++
T Consensus        68 --~~~~i~~~~~~--~~~~~~~~~~~~~~-~~~   95 (182)
T d1e5qa1          68 --HDLVISLIPYT--FHATVIKSAIRQKK-HVV   95 (182)
T ss_dssp             --SSEEEECSCGG--GHHHHHHHHHHHTC-EEE
T ss_pred             --cceeEeeccch--hhhHHHHHHHhhcc-cee
Confidence              57777665532  23334444444333 444

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.91  E-value=9.3e-06  Score=62.95  Aligned_cols=104  Identities=16%  Similarity=0.160  Sum_probs=72.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce--EEeCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK--TVWGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~--~v~~D---~~~l~~  146 (250)
                      .++.+|||+    ||+|.+|...++.....|.+|+++++++++.+.++           ..+..  ++..|   .+.+.+
T Consensus        28 ~~G~~VlV~----ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-----------~~Ga~~vi~~~~~~~~~~~~~   92 (182)
T d1v3va2          28 KGGETVLVS----AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-----------QIGFDAAFNYKTVNSLEEALK   92 (182)
T ss_dssp             CSSCEEEES----STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSCSCHHHHHH
T ss_pred             CCCCEEEEE----eCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-----------hhhhhhhcccccccHHHHHHH
Confidence            356899999    99999999999999999999999999876554321           22222  22233   444555


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccCC
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKPA  194 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~~  194 (250)
                      ...+..+|+|+++.|.  +.....++.++..  .+++.++....|+..
T Consensus        93 ~~~~~Gvd~v~D~vG~--~~~~~~~~~l~~~--G~~v~~G~~~~~~~~  136 (182)
T d1v3va2          93 KASPDGYDCYFDNVGG--EFLNTVLSQMKDF--GKIAICGAISVYNRM  136 (182)
T ss_dssp             HHCTTCEEEEEESSCH--HHHHHHGGGEEEE--EEEEECCCGGGTTCT
T ss_pred             HhhcCCCceeEEecCc--hhhhhhhhhccCC--CeEEeecceeecccc
Confidence            5566679999999983  3444555555443  478888877766543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.89  E-value=2e-05  Score=59.83  Aligned_cols=103  Identities=20%  Similarity=0.207  Sum_probs=72.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcc---cc-hhcCCceEEe-CCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRF---NE-IVSAGGKTVW-GDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~---~~-~~~~~v~~v~-~D~~~l~~~l~  149 (250)
                      |+|-|+     |.|.+|..+++.|+++||+|++.+|+++..+.+.+......   .+ ....++.+.. .|++.+++++.
T Consensus         1 MkIgiI-----GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~   75 (161)
T d1vpda2           1 MKVGFI-----GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVAL   75 (161)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred             CEEEEE-----ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHh
Confidence            579999     58999999999999999999999998876555432222111   11 2233443333 36666666652


Q ss_pred             C--------CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          150 G--------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       150 ~--------~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +        .+-+++|++.....+..+.+.+.+++.++ +||
T Consensus        76 ~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~-~~v  116 (161)
T d1vpda2          76 GENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGV-EML  116 (161)
T ss_dssp             STTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC-EEE
T ss_pred             CCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC-cee
Confidence            1        12368999999999999999999988776 555

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.89  E-value=2.3e-06  Score=65.91  Aligned_cols=40  Identities=28%  Similarity=0.436  Sum_probs=35.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      |||.|+    ||+|.+|++|++.|++.||+|++.+|++++.+.+
T Consensus         1 Mki~vi----gGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALL----GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEE----eCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            689999    9999999999999999999999999998665543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.86  E-value=2.1e-05  Score=59.85  Aligned_cols=105  Identities=15%  Similarity=0.169  Sum_probs=71.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCc---ccc-hhcCCceEE-eCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNR---FNE-IVSAGGKTV-WGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~---~~~-~~~~~v~~v-~~D~~~l~~~l  148 (250)
                      +++|-|+     |.|.+|..+++.|+++||+|++.+|+++..+.+.+.....   ..+ ....++.++ ..+.+.+++++
T Consensus         1 M~kIg~I-----GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~   75 (162)
T d3cuma2           1 MKQIAFI-----GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLY   75 (162)
T ss_dssp             CCEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHH
T ss_pred             CCEEEEE-----EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHH
Confidence            4689999     6899999999999999999999999876544433222111   111 122233322 33444555443


Q ss_pred             cC--------CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          149 GG--------VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       149 ~~--------~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      ..        .+=+++|++...+.+.++.+.+.+++.|+ +|+-
T Consensus        76 ~~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi-~~~d  118 (162)
T d3cuma2          76 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL-AMLD  118 (162)
T ss_dssp             HSTTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred             hccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCC-cEEe
Confidence            21        12368999999999999999999999887 6664

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.86  E-value=8.9e-06  Score=62.81  Aligned_cols=100  Identities=15%  Similarity=0.194  Sum_probs=69.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D---~~~l~~  146 (250)
                      ..+.+|||+    ||+|.+|...++.+...|.+|+++++++++.+.+++.           +.. ++. .|   .+.+.+
T Consensus        24 ~~g~~VlI~----ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~-----------Ga~~vi~~~~~~~~~~v~~   88 (183)
T d1pqwa_          24 SPGERVLIH----SATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-----------GVEYVGDSRSVDFADEILE   88 (183)
T ss_dssp             CTTCEEEET----TTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-----------CCSEEEETTCSTHHHHHHH
T ss_pred             CCCCEEEEE----CCCCCcccccchhhccccccceeeecccccccccccc-----------cccccccCCccCHHHHHHH
Confidence            346799999    9999999999999988999999999887655433222           222 222 23   355555


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGI  190 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~v  190 (250)
                      ...+..+|+|+++.|.  +.....++.++..  +++|.++....
T Consensus        89 ~t~~~g~d~v~d~~g~--~~~~~~~~~l~~~--G~~v~~G~~~~  128 (183)
T d1pqwa_          89 LTDGYGVDVVLNSLAG--EAIQRGVQILAPG--GRFIELGKKDV  128 (183)
T ss_dssp             HTTTCCEEEEEECCCT--HHHHHHHHTEEEE--EEEEECSCGGG
T ss_pred             HhCCCCEEEEEecccc--hHHHHHHHHhcCC--CEEEEEccCCC
Confidence            5556679999999983  3344455555543  58888865543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=2.2e-05  Score=60.18  Aligned_cols=97  Identities=11%  Similarity=0.170  Sum_probs=66.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCC---HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD---PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D---~~~l~~  146 (250)
                      ..+.+|||+    ||+|.+|...++.+...|.+|+++++++++.+..+           ..+.. ++ ..|   .+.+.+
T Consensus        27 ~~g~~VlV~----Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-----------~~Ga~~vi~~~~~~~~~~i~~   91 (174)
T d1yb5a2          27 KAGESVLVH----GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-----------QNGAHEVFNHREVNYIDKIKK   91 (174)
T ss_dssp             CTTCEEEEE----TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSTTHHHHHHH
T ss_pred             CCCCEEEEE----eccccccccccccccccCccccccccccccccccc-----------ccCcccccccccccHHHHhhh
Confidence            346799999    99999999999999999999999998765544221           12222 22 222   345555


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ...+..+|+|+++.|.  ......++.++..  +++|.++.
T Consensus        92 ~t~~~g~d~v~d~~g~--~~~~~~~~~l~~~--G~iv~~G~  128 (174)
T d1yb5a2          92 YVGEKGIDIIIEMLAN--VNLSKDLSLLSHG--GRVIVVGS  128 (174)
T ss_dssp             HHCTTCEEEEEESCHH--HHHHHHHHHEEEE--EEEEECCC
T ss_pred             hhccCCceEEeecccH--HHHHHHHhccCCC--CEEEEEec
Confidence            5566679999999883  3344555655543  58888764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=2.7e-05  Score=59.77  Aligned_cols=96  Identities=15%  Similarity=0.132  Sum_probs=61.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .+.++|||+    ||+|.+|...++.+...|.+|+++++++++.+..           ...+...+..-.+...+.-.+.
T Consensus        26 ~~g~~VlI~----ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-----------~~lGa~~~i~~~~~~~~~~~~~   90 (171)
T d1iz0a2          26 RPGEKVLVQ----AAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-----------LALGAEEAATYAEVPERAKAWG   90 (171)
T ss_dssp             CTTCEEEES----STTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-----------HHTTCSEEEEGGGHHHHHHHTT
T ss_pred             CCCCEEEEE----eccccchhhhhhhhcccccccccccccccccccc-----------cccccceeeehhhhhhhhhccc
Confidence            456799999    9999999999999999999999999887655432           2223332221122223333344


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+|+|+++.|.+.   ...+++++.  -+++|.++.
T Consensus        91 g~D~v~d~~G~~~---~~~~~~l~~--~G~~v~~G~  121 (171)
T d1iz0a2          91 GLDLVLEVRGKEV---EESLGLLAH--GGRLVYIGA  121 (171)
T ss_dssp             SEEEEEECSCTTH---HHHHTTEEE--EEEEEEC--
T ss_pred             cccccccccchhH---HHHHHHHhc--CCcEEEEeC
Confidence            5999999988543   333444443  247887764

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.64  E-value=0.00011  Score=54.89  Aligned_cols=99  Identities=22%  Similarity=0.256  Sum_probs=65.7

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCCHHHHHhhhcCCc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ||.|+    ||+|.+|..++..|..+|  -++++++.++.+...+.      +.... ...... .....+..+.+++  
T Consensus         2 Kv~Ii----GA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~D------l~~~~~~~~~~~-~~~~~~~~~~~~~--   68 (144)
T d1mlda1           2 KVAVL----GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAAD------LSHIETRATVKG-YLGPEQLPDCLKG--   68 (144)
T ss_dssp             EEEEE----TTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHH------HTTSSSSCEEEE-EESGGGHHHHHTT--
T ss_pred             eEEEE----CCCChHHHHHHHHHHhCCccceEEEEeccccchhhHH------HhhhhhhcCCCe-EEcCCChHHHhCC--
Confidence            79999    999999999999999888  56888887653222110      00000 011111 1235556666777  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||-++|              .|....+.+++.+++++.+-+|.+-|
T Consensus        69 aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          69 CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            599999998              36777899999999877555554443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.64  E-value=2.7e-05  Score=58.45  Aligned_cols=101  Identities=21%  Similarity=0.316  Sum_probs=67.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ++||.|+    |+ |++|..++..|+.+|  .+|++++++++..+..... +..-. .......+..+|.++    +.+ 
T Consensus         5 ~~KI~II----Ga-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~D-l~~a~-~~~~~~~~~~~d~~~----~~~-   72 (146)
T d1ez4a1           5 HQKVVLV----GD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALD-LEDAQ-AFTAPKKIYSGEYSD----CKD-   72 (146)
T ss_dssp             BCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHGGG-GGSCCCEEEECCGGG----GTT-
T ss_pred             CCEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHH-Hhccc-cccCCceEeeccHHH----hcc-
Confidence            5799999    85 999999999999987  6899999877543211100 00000 112233455667654    344 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                       .|+||.++|              .|....+.+++.+++.+.+-++.+-|
T Consensus        73 -adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          73 -ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence             599999998              35667888888888877665655544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=0.00027  Score=52.70  Aligned_cols=93  Identities=13%  Similarity=0.152  Sum_probs=54.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEEcCCCccccCCCCCCCcccchhcCCceE-EeCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKT-VWGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~-v~~D~~~l~~~l  148 (250)
                      ||+|-|+    ||||++|+.+++.|+++.    .+++.+.++........         ........ ...|.+++    
T Consensus         1 MkkVaIv----GATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~---------~~~~~~~~~~~~~~~~~----   63 (146)
T d1t4ba1           1 MQNVGFI----GWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS---------FGGTTGTLQDAFDLEAL----   63 (146)
T ss_dssp             CCEEEEE----STTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG---------GGTCCCBCEETTCHHHH----
T ss_pred             CcEEEEE----CCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc---------ccCCceeeecccchhhh----
Confidence            4689999    999999999999888763    45666665543222110         11111111 11233333    


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      .+  +|++|.+++  -.....+.+.+.+.|.+ .+|=.||
T Consensus        64 ~~--~DivF~a~~--~~~s~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          64 KA--LDIIVTCQG--GDYTNEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             HT--CSEEEECSC--HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             hc--CcEEEEecC--chHHHHhhHHHHhcCCCeecccCCc
Confidence            33  699999986  34466667777777753 3343343

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.00041  Score=47.37  Aligned_cols=86  Identities=17%  Similarity=0.248  Sum_probs=59.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC--HHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD--PAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D--~~~l~~~l~  149 (250)
                      -++|+|+|+    | -|..|..+++.|.++|++|++.+.+.+....          .....++.+..++  .+.+    .
T Consensus         3 ~~~K~v~Vi----G-lG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~----------~~~~~~~~~~~~~~~~~~~----~   63 (93)
T d2jfga1           3 YQGKNVVII----G-LGLTGLSCVDFFLARGVTPRVMDTRMTPPGL----------DKLPEAVERHTGSLNDEWL----M   63 (93)
T ss_dssp             CTTCCEEEE----C-CSHHHHHHHHHHHHTTCCCEEEESSSSCTTG----------GGSCTTSCEEESBCCHHHH----H
T ss_pred             cCCCEEEEE----e-ECHHHHHHHHHHHHCCCEEEEeeCCcCchhH----------HHHhhccceeecccchhhh----c
Confidence            357899999    6 5889999999999999999999986532210          0112234444443  3332    2


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      +  +|.||-..|+..  ...++..|++.|++
T Consensus        64 ~--~d~vi~SPGi~~--~~~~~~~a~~~gi~   90 (93)
T d2jfga1          64 A--ADLIVASPGIAL--AHPSLSAAADAGIE   90 (93)
T ss_dssp             H--CSEEEECTTSCT--TSHHHHHHHHTTCE
T ss_pred             c--CCEEEECCCCCC--CCHHHHHHHHcCCC
Confidence            2  699999999654  45688888888873

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.53  E-value=0.00025  Score=52.80  Aligned_cols=40  Identities=30%  Similarity=0.437  Sum_probs=35.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      .+.++|.|+    ||.|.+|..+++.|.++||+|++.+|..+..
T Consensus         7 ~~~~kI~iI----Gg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           7 SDIHKIVIV----GGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             TTCCCEEEE----TTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCCeEEEE----cCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            346799999    9999999999999999999999999987543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.52  E-value=3.2e-05  Score=59.26  Aligned_cols=101  Identities=17%  Similarity=0.111  Sum_probs=62.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CC--HHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GD--PAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D--~~~l~~~l~~  150 (250)
                      .|+|.|+    | .|.+|..++..|.++||+|++++|+++..+.+.+.....   ....+..... .+  ..++.+++++
T Consensus         1 sk~iaIi----G-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~   72 (184)
T d1bg6a2           1 SKTYAVL----G-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII---AEGPGLAGTAHPDLLTSDIGLAVKD   72 (184)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE---EESSSCCEEECCSEEESCHHHHHTT
T ss_pred             CCEEEEE----C-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCc---hhhhhhhhhhhhhhhhhhhHhHhcC
Confidence            3799999    6 599999999999999999999999876554432211000   0011111111 11  2345666666


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhC-CCCEEEEEc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSS-GVKQFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~-~~~~~v~iS  186 (250)
                        .|+||-+..  ......+++.++.+ .-..+|.++
T Consensus        73 --aD~iii~v~--~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          73 --ADVILIVVP--AIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             --CSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             --CCEEEEEEc--hhHHHHHHHHhhhccCCCCEEEEe
Confidence              699998754  44567777777663 233455443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.48  E-value=8.7e-05  Score=57.27  Aligned_cols=99  Identities=18%  Similarity=0.182  Sum_probs=64.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCC--HHHHHhhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGD--PAEVGNVV  148 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D--~~~l~~~l  148 (250)
                      ....+|||.    ||+|.+|...++.+...|.+|++.++++++.+...           ..+.. ++..+  .++..+..
T Consensus        30 ~~g~~VLI~----gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-----------~lGa~~vi~~~~~~~~~~~~~   94 (176)
T d1xa0a2          30 PERGPVLVT----GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-----------VLGAKEVLAREDVMAERIRPL   94 (176)
T ss_dssp             GGGCCEEES----STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-----------HTTCSEEEECC---------C
T ss_pred             CCCCEEEEE----eccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-----------hcccceeeecchhHHHHHHHh
Confidence            345789999    99999999999999999999999999887655322           11222 22122  23333444


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .+..+|+||++.|-.  .....++.++.  -+|++.++..+
T Consensus        95 ~~~gvD~vid~vgg~--~~~~~l~~l~~--~Griv~~G~~~  131 (176)
T d1xa0a2          95 DKQRWAAAVDPVGGR--TLATVLSRMRY--GGAVAVSGLTG  131 (176)
T ss_dssp             CSCCEEEEEECSTTT--THHHHHHTEEE--EEEEEECSCCS
T ss_pred             hccCcCEEEEcCCch--hHHHHHHHhCC--CceEEEeeccc
Confidence            556799999998843  23444444444  35888888754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.43  E-value=0.00015  Score=54.49  Aligned_cols=85  Identities=16%  Similarity=0.055  Sum_probs=53.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |||+|+    |+ |.+|..++..|.+.||+|++++|+++....+......    ...........+.+.+    ..  +|
T Consensus         1 MkI~Ii----Ga-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~--~D   65 (167)
T d1ks9a2           1 MKITVL----GC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD----GSIFNESLTANDPDFL----AT--SD   65 (167)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT----SCEEEEEEEESCHHHH----HT--CS
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC----ccccccccccchhhhh----cc--cc
Confidence            689999    76 9999999999999999999999988655533211100    0000111222234333    33  69


Q ss_pred             EEEeCCCcCHHhHHHHHHHHHh
Q 025587          155 VVLDNNGKNLDAVRPVADWAKS  176 (250)
Q Consensus       155 ~Vi~~ag~~~~~~~~ll~~~~~  176 (250)
                      +||.+.-.  ..+..+++.++.
T Consensus        66 ~iii~vka--~~~~~~~~~l~~   85 (167)
T d1ks9a2          66 LLLVTLKA--WQVSDAVKSLAS   85 (167)
T ss_dssp             EEEECSCG--GGHHHHHHHHHT
T ss_pred             eEEEeecc--cchHHHHHhhcc
Confidence            99987642  345555666555

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.41  E-value=0.00015  Score=54.76  Aligned_cols=37  Identities=27%  Similarity=0.363  Sum_probs=32.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      |||.|+    | .|.+|..+++.|.+.||+|++++|+++..+
T Consensus         1 MkI~iI----G-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~   37 (165)
T d2f1ka2           1 MKIGVV----G-LGLIGASLAGDLRRRGHYLIGVSRQQSTCE   37 (165)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CEEEEE----e-ecHHHHHHHHHHHHCCCEEEEEECCchHHH
Confidence            689999    5 699999999999999999999999875544

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.37  E-value=4.3e-05  Score=59.50  Aligned_cols=104  Identities=15%  Similarity=0.221  Sum_probs=64.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhh------
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV------  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~------  147 (250)
                      -++|.|+    |+ |.+|..++..++..|++|++++++++..+...+.-...+......+.    .+.+.....      
T Consensus         4 I~~vaVi----Ga-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~----~~~~~~~~~~~~i~~   74 (186)
T d1wdka3           4 VKQAAVL----GA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGR----MTPAKMAEVLNGIRP   74 (186)
T ss_dssp             CSSEEEE----CC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTS----SCHHHHHHHHHHEEE
T ss_pred             CCEEEEE----Cc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccc----cchhhhhhhhceeec
Confidence            4689999    65 99999999999999999999999875443211000000000000000    011111111      


Q ss_pred             ------hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          148 ------VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       148 ------l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                            +.  ..|.||.+..-+++.-+.++....+.-.+..|+.|+.
T Consensus        75 ~~~~~~~~--~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnT  119 (186)
T d1wdka3          75 TLSYGDFG--NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNT  119 (186)
T ss_dssp             ESSSTTGG--GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred             cccccccc--ccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEecc
Confidence                  22  3799999999999999999988877544444555543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.0001  Score=56.42  Aligned_cols=98  Identities=12%  Similarity=0.173  Sum_probs=66.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D---~~~l~~~  147 (250)
                      .+.+|||+    ||+|.+|..+++.+...|.+|+++++++++.+.++           ..+.. ++. .|   .+.+.++
T Consensus        28 ~g~~Vlv~----ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-----------~lGa~~vi~~~~~d~~~~v~~~   92 (179)
T d1qora2          28 PDEQFLFH----AAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-----------KAGAWQVINYREEDLVERLKEI   92 (179)
T ss_dssp             TTCEEEES----STTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-----------HHTCSEEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEE----ccccccchHHHHHHHHhCCeEeecccchHHHHHHH-----------hcCCeEEEECCCCCHHHHHHHH
Confidence            45799999    99999999999999999999999999986655322           12222 222 23   4455555


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      -.+..+|+|+++.+..  .....++.++..  ++++.++...
T Consensus        93 t~g~g~d~v~d~~g~~--~~~~~~~~l~~~--G~~v~~g~~~  130 (179)
T d1qora2          93 TGGKKVRVVYDSVGRD--TWERSLDCLQRR--GLMVSFGNSS  130 (179)
T ss_dssp             TTTCCEEEEEECSCGG--GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             hCCCCeEEEEeCccHH--HHHHHHHHHhcC--Ceeeeccccc
Confidence            5566799999999843  234445544443  3677665433

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.34  E-value=0.0004  Score=53.06  Aligned_cols=103  Identities=16%  Similarity=0.191  Sum_probs=65.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCC--------Ccccch----hcCCceEE-eCCH
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF--------NRFNEI----VSAGGKTV-WGDP  141 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~--------~~~~~~----~~~~v~~v-~~D~  141 (250)
                      .+|-|+     |.|.+|..+++.|+++||+|++.+|++++.+.+.+...        ....++    ...+..+. ..+.
T Consensus         3 ~nIg~I-----GlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALI-----GLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred             CcEEEE-----eEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCch
Confidence            578999     58999999999999999999999999876655432211        011111    11111111 1122


Q ss_pred             HHHHhhhcC-----CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          142 AEVGNVVGG-----VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       142 ~~l~~~l~~-----~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +.+.+.+++     ..-++||++.......++.+.+.+++.++ +|+
T Consensus        78 ~~v~~v~~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~-~~l  123 (176)
T d2pgda2          78 QAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGI-LFV  123 (176)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC-EEE
T ss_pred             HHHHHHHHHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCC-cee
Confidence            222222211     11368899988899999999999988776 444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00065  Score=50.49  Aligned_cols=96  Identities=17%  Similarity=0.203  Sum_probs=63.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      .+|+|.    | .|-+|..++++|.++|++|++++.+++....       ........++.++.||   ++.+.++-- .
T Consensus         4 nHiII~----G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~-------~~~~~~~~~~~vi~Gd~~d~~~L~~a~i-~   70 (153)
T d1id1a_           4 DHFIVC----G-HSILAINTILQLNQRGQNVTVISNLPEDDIK-------QLEQRLGDNADVIPGDSNDSSVLKKAGI-D   70 (153)
T ss_dssp             SCEEEE----C-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHH-------HHHHHHCTTCEEEESCTTSHHHHHHHTT-T
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHcCCCEEEEeccchhHHH-------HHHHhhcCCcEEEEccCcchHHHHHhcc-c
Confidence            468888    5 5999999999999999999999987753221       1112344578899998   555555422 2


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHh-CCCCEEEE
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKS-SGVKQFLF  184 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~-~~~~~~v~  184 (250)
                      +.|+||-+.+.+.. ...++..+++ .+..++|-
T Consensus        71 ~a~~vi~~~~~d~~-n~~~~~~~r~~~~~~~iia  103 (153)
T d1id1a_          71 RCRAILALSDNDAD-NAFVVLSAKDMSSDVKTVL  103 (153)
T ss_dssp             TCSEEEECSSCHHH-HHHHHHHHHHHTSSSCEEE
T ss_pred             cCCEEEEccccHHH-HHHHHHHHHHhCCCCceEE
Confidence            47899988775433 3334445555 34445543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.32  E-value=0.00014  Score=55.02  Aligned_cols=87  Identities=23%  Similarity=0.270  Sum_probs=60.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..+++|||+    |+ |.+|+.+++.|.+.|+ +|++..|..++...+.+.          .+.+  ..+.+++.+.+..
T Consensus        22 l~~~~ilvi----Ga-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~----------~~~~--~~~~~~~~~~l~~   84 (159)
T d1gpja2          22 LHDKTVLVV----GA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD----------LGGE--AVRFDELVDHLAR   84 (159)
T ss_dssp             CTTCEEEEE----SC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH----------HTCE--ECCGGGHHHHHHT
T ss_pred             cccCeEEEE----CC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh----------hhcc--cccchhHHHHhcc
Confidence            357899999    75 9999999999999997 698999987665543211          1222  2356778888877


Q ss_pred             CcccEEEeCCCcC--HHhHHHHHHHHHhC
Q 025587          151 VTFDVVLDNNGKN--LDAVRPVADWAKSS  177 (250)
Q Consensus       151 ~~~d~Vi~~ag~~--~~~~~~ll~~~~~~  177 (250)
                        +|+||.+.+..  +.....+-..++..
T Consensus        85 --~Divi~atss~~~ii~~~~i~~~~~~r  111 (159)
T d1gpja2          85 --SDVVVSATAAPHPVIHVDDVREALRKR  111 (159)
T ss_dssp             --CSEEEECCSSSSCCBCHHHHHHHHHHC
T ss_pred             --CCEEEEecCCCCccccHhhhHHHHHhc
Confidence              69999998732  33333444455443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.30  E-value=0.00011  Score=54.99  Aligned_cols=100  Identities=15%  Similarity=0.148  Sum_probs=62.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCc--cccCCCCCCCcccc---hhcCCceEEeCCHHHHHhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDEN--SDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~--~~~~~~~~~~~~~~---~~~~~v~~v~~D~~~l~~~  147 (250)
                      |||.|+    ||+|.+|..++..|+.+|  .++.++++.++.  .+.+.    ..+.+   ....+++....-.++ .+.
T Consensus         1 MKV~Ii----GA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a----~Dl~~~~~~~~~~~~~~~~~~~d-~~~   71 (145)
T d1hyea1           1 MKVTII----GASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLR----EDIYDALAGTRSDANIYVESDEN-LRI   71 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHH----HHHHHHHTTSCCCCEEEEEETTC-GGG
T ss_pred             CEEEEE----CCCChHHHHHHHHHHhCCcccccccccchhhhHhhhccc----ccchhcccccccCCccccCCcch-HHH
Confidence            589999    999999999999999998  589999987521  11100    00000   112233332221111 234


Q ss_pred             hcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          148 VGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       148 l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      +++  .|+||-+||              .|....+.+++...+.+.+.++.+
T Consensus        72 l~~--aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          72 IDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             hcc--ceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            455  599999998              356668888888888766666544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.29  E-value=5.6e-05  Score=59.49  Aligned_cols=40  Identities=28%  Similarity=0.343  Sum_probs=34.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK  119 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~  119 (250)
                      |+|.|+     |.|++|..++..|+++||+|++++.+.+..+.+.
T Consensus         1 MkI~Vi-----GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           1 MRISIF-----GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             CEEEEE-----CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEE-----CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            689999     5899999999999999999999998876655543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=2.7e-05  Score=61.06  Aligned_cols=107  Identities=19%  Similarity=0.246  Sum_probs=67.4

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCc----------------eE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG----------------KT  136 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v----------------~~  136 (250)
                      +-++|.|+    |+ |.+|+.++..++..||+|++++++++..+...+.-...+..+...+.                .+
T Consensus         3 ~IkkvaVi----Ga-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i   77 (192)
T d1f0ya2           3 IVKHVTVI----GG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTI   77 (192)
T ss_dssp             CCCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred             eeEEEEEE----Cc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhc
Confidence            34799999    64 99999999999999999999999876443221100000000000000                00


Q ss_pred             EeCCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          137 VWGDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       137 v~~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      ..  ..++.+++.+  .|.|+.+..-+.+.-+.++....+.-.+.-|+.|+.
T Consensus        78 ~~--~~d~~~a~~~--ad~ViEav~E~l~~K~~v~~~l~~~~~~~~ilasnT  125 (192)
T d1f0ya2          78 AT--STDAASVVHS--TDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNT  125 (192)
T ss_dssp             EE--ESCHHHHTTS--CSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECC
T ss_pred             cc--cchhHhhhcc--cceehhhcccchhHHHHHHHHHhhhcccCceeeccC
Confidence            00  1223445555  699999999999999999988877443444555543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=7.5e-05  Score=57.68  Aligned_cols=97  Identities=13%  Similarity=0.119  Sum_probs=65.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~~~~  152 (250)
                      ..+|||+    ||+|.+|...++.+...|++|+++++++++.+.+           ...+.. ++..+.++..+.+....
T Consensus        32 ~~~vlV~----gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-----------~~lGad~vi~~~~~~~~~~l~~~~   96 (177)
T d1o89a2          32 DGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-----------KSLGASRVLPRDEFAESRPLEKQV   96 (177)
T ss_dssp             GCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-----------HHHTEEEEEEGGGSSSCCSSCCCC
T ss_pred             CCcEEEE----EccccchHHHHHHHHHcCCCeEEEecchhHHHHH-----------HhhccccccccccHHHHHHHHhhc
Confidence            3589999    9999999999999999999999999988765432           222333 22223333444555556


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .|.+||+.|-.  .....++.++.  -+++|.++...
T Consensus        97 ~~~vvD~Vgg~--~~~~~l~~l~~--~Griv~~G~~~  129 (177)
T d1o89a2          97 WAGAIDTVGDK--VLAKVLAQMNY--GGCVAACGLAG  129 (177)
T ss_dssp             EEEEEESSCHH--HHHHHHHTEEE--EEEEEECCCTT
T ss_pred             CCeeEEEcchH--HHHHHHHHhcc--ccceEeecccC
Confidence            89999998732  23344444433  34888877654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00097  Score=50.31  Aligned_cols=76  Identities=22%  Similarity=0.244  Sum_probs=51.0

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      .....+|+|.    |+ |.+|...++.+...|.+|+++++++++.+..+         -...+..+...+.+......++
T Consensus        28 ~~~G~~VlI~----Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~---------~lGad~~i~~~~~~~~~~~~~~   93 (168)
T d1uufa2          28 AGPGKKVGVV----GI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK---------ALGADEVVNSRNADEMAAHLKS   93 (168)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH---------HHTCSEEEETTCHHHHHTTTTC
T ss_pred             CCCCCEEEEe----cc-chHHHHHHHHhhcccccchhhccchhHHHHHh---------ccCCcEEEECchhhHHHHhcCC
Confidence            3456899999    86 88999999999889999999998775543211         1112222333344444444444


Q ss_pred             CcccEEEeCCCc
Q 025587          151 VTFDVVLDNNGK  162 (250)
Q Consensus       151 ~~~d~Vi~~ag~  162 (250)
                        +|+||++.|.
T Consensus        94 --~D~vid~~g~  103 (168)
T d1uufa2          94 --FDFILNTVAA  103 (168)
T ss_dssp             --EEEEEECCSS
T ss_pred             --Cceeeeeeec
Confidence              8999999883

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.20  E-value=0.00054  Score=51.71  Aligned_cols=98  Identities=14%  Similarity=0.179  Sum_probs=61.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC----CHHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----DPAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~----D~~~l~~~  147 (250)
                      ....+|+|+    | +|.+|...++.+...|.+|+++++++++.+..++.         ..+..++..    |.+++.+.
T Consensus        25 ~~g~~vlV~----G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~---------ga~~~~~~~~~~~~~~~~~~~   90 (170)
T d1e3ja2          25 QLGTTVLVI----G-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC---------GADVTLVVDPAKEEESSIIER   90 (170)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---------TCSEEEECCTTTSCHHHHHHH
T ss_pred             CCCCEEEEE----c-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc---------CCcEEEeccccccccchhhhh
Confidence            345789999    7 68999999999999999999999988655422111         111122211    23333333


Q ss_pred             hc---CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          148 VG---GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       148 l~---~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      +.   +..+|+||++.|.. ......++.++..  +++++++
T Consensus        91 ~~~~~g~g~D~vid~~g~~-~~~~~a~~~~~~~--G~iv~~G  129 (170)
T d1e3ja2          91 IRSAIGDLPNVTIDCSGNE-KCITIGINITRTG--GTLMLVG  129 (170)
T ss_dssp             HHHHSSSCCSEEEECSCCH-HHHHHHHHHSCTT--CEEEECS
T ss_pred             hhcccccCCceeeecCCCh-HHHHHHHHHHhcC--CceEEEe
Confidence            32   34589999999842 2334445555543  4788776

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.17  E-value=0.00048  Score=52.56  Aligned_cols=102  Identities=19%  Similarity=0.241  Sum_probs=63.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCC-----------cccch----hcCCc-eEEe
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFN-----------RFNEI----VSAGG-KTVW  138 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~-----------~~~~~----~~~~v-~~v~  138 (250)
                      |+|-|+     |.|.+|..+++.|+++||+|++.+|++++.+.+.+....           ....+    ..... ..+.
T Consensus         2 MkIGvI-----GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           2 MDVGVV-----GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             BSEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CEEEEE-----eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            679999     699999999999999999999999987665544211100           00000    01111 1111


Q ss_pred             CCHH-------HHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          139 GDPA-------EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       139 ~D~~-------~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .+..       .+...+..  -++++++........+.+.+.+.+.++ +|+-
T Consensus        77 ~~~~~~~~~~~~~~~~~~~--~~iii~~st~~~~~~~~~~~~l~~~~~-~~ld  126 (178)
T d1pgja2          77 QAGAATDSTIEQLKKVFEK--GDILVDTGNAHFKDQGRRAQQLEAAGL-RFLG  126 (178)
T ss_dssp             CCSHHHHHHHHHHHHHCCT--TCEEEECCCCCHHHHHHHHHHHHTTTC-EEEE
T ss_pred             cCcchhhhhhhhhhhhccc--cceecccCccchhHHHHHHHHHhhcce-eEec
Confidence            1211       22222222  368888888888888888888877665 4443

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00085  Score=53.45  Aligned_cols=59  Identities=19%  Similarity=0.114  Sum_probs=40.6

Q ss_pred             chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHH----HHhhhcCCcccEEEeCCC
Q 025587           87 HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAE----VGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus        87 tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~----l~~~l~~~~~d~Vi~~ag  161 (250)
                      +|.+|.+|++++..+|++|+++.-.....              ...++..+... .++    +.+.+..  .|++|++|+
T Consensus        31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------------~p~~~~~~~~~t~~~m~~~~~~~~~~--~D~~i~aAA   94 (223)
T d1u7za_          31 SGKMGFAIAAAAARRGANVTLVSGPVSLP--------------TPPFVKRVDVMTALEMEAAVNASVQQ--QNIFIGCAA   94 (223)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEECSCCCC--------------CCTTEEEEECCSHHHHHHHHHHHGGG--CSEEEECCB
T ss_pred             cHHHHHHHHHHHHHcCCchhhhhcccccC--------------cccccccceehhhHHHHHHHHhhhcc--ceeEeeeec
Confidence            89999999999999999999998654211              11244444433 333    3333444  799999988

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.15  E-value=0.00033  Score=51.92  Aligned_cols=98  Identities=19%  Similarity=0.166  Sum_probs=59.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +||.|+    |+ |.+|..++..|+.+|  .+++++++.++..+..... +..-.. .........+|.++    +.+  
T Consensus         2 ~KI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~D-l~~~~~-~~~~~~~~~~~~~~----~~~--   68 (142)
T d1y6ja1           2 SKVAII----GA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD-INHGLP-FMGQMSLYAGDYSD----VKD--   68 (142)
T ss_dssp             CCEEEE----CC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH-HTTSCC-CTTCEEEC--CGGG----GTT--
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeee-eccCcc-cCCCeeEeeCcHHH----hCC--
Confidence            589999    86 999999999999987  4899999887654321100 000000 01122333345443    444  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      .|+|+-++|              .|..-.+.+++.+++.+.+-++.+
T Consensus        69 adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          69 CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             CceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            599999998              356667788888888665444433

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.14  E-value=0.001  Score=50.18  Aligned_cols=96  Identities=20%  Similarity=0.167  Sum_probs=58.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D~~~l~~~l~  149 (250)
                      ..+.+|+|+    |+ |.+|...++.+...|.+|+++++++++.+..           ...+.. ++ ..+.+++.+...
T Consensus        26 ~~g~~vlI~----Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-----------~~lGa~~~i~~~~~~~~~~~~~   89 (168)
T d1piwa2          26 GPGKKVGIV----GL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-----------MKMGADHYIATLEEGDWGEKYF   89 (168)
T ss_dssp             STTCEEEEE----CC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-----------HHHTCSEEEEGGGTSCHHHHSC
T ss_pred             CCCCEEEEE----CC-CCcchhHHHHhhhccccccccccchhHHHHh-----------hccCCcEEeeccchHHHHHhhh
Confidence            356799999    86 9999999998888899999999988665532           112222 22 222333343333


Q ss_pred             CCcccEEEeCCCcCHHh-HHHHHHHHHhCCCCEEEEEc
Q 025587          150 GVTFDVVLDNNGKNLDA-VRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~-~~~ll~~~~~~~~~~~v~iS  186 (250)
                      + .+|+++++.+..... ....++.++..  ++++.++
T Consensus        90 ~-~~d~vi~~~~~~~~~~~~~~~~~l~~~--G~iv~~G  124 (168)
T d1piwa2          90 D-TFDLIVVCASSLTDIDFNIMPKAMKVG--GRIVSIS  124 (168)
T ss_dssp             S-CEEEEEECCSCSTTCCTTTGGGGEEEE--EEEEECC
T ss_pred             c-ccceEEEEecCCccchHHHHHHHhhcc--ceEEEec
Confidence            3 389999997743221 11223333332  4677765

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.14  E-value=0.00042  Score=51.69  Aligned_cols=101  Identities=20%  Similarity=0.326  Sum_probs=63.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ++||.|+    |+ |.+|..++..|+.+|  .+++++++.++..+..... ...-.......+.+..+|.++    +.+ 
T Consensus         6 ~~KI~Ii----Ga-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~D-l~~~~~~~~~~~~~~~~d~~~----l~d-   74 (148)
T d1ldna1           6 GARVVVI----GA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-FNHGKVFAPKPVDIWHGDYDD----CRD-   74 (148)
T ss_dssp             SCEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHHHTTSSSSCCEEEECCGGG----TTT-
T ss_pred             CCeEEEE----Cc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhcc-HhhCccccCCCeEEEECCHHH----hcc-
Confidence            4689999    86 999999999999887  4799999876542211000 000000112334455566644    444 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCC-EEEEEc
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVK-QFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~-~~v~iS  186 (250)
                       .|+||.++|              .|....+.+++.+++++.+ .||.+|
T Consensus        75 -aDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             -ceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence             599999988              2566677778887776544 444444

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.13  E-value=0.00027  Score=52.30  Aligned_cols=99  Identities=18%  Similarity=0.208  Sum_probs=62.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~  151 (250)
                      |||.|+    |+ |.+|..++..|+..|  .++++++.+++........ ............++. ..|.++    +.+ 
T Consensus         1 mKI~II----Ga-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d-~~~~~~~~~~~~~i~~~~~~~~----~~d-   69 (142)
T d1guza1           1 MKITVI----GA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALD-MYESGPVGLFDTKVTGSNDYAD----TAN-   69 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCEEEEESCGGG----GTT-
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhh-hhcccchhcccceEEecCCHHH----hcC-
Confidence            589999    86 999999999999987  6899999887544321100 000001112233333 344544    444 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                       .|+|+-++|              .|..-.+.+++.+.+.+.+-++.+
T Consensus        70 -advvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          70 -SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             -CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             -CeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence             599999998              245567777777777654444443

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.00017  Score=47.77  Aligned_cols=41  Identities=12%  Similarity=0.227  Sum_probs=36.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      .+.++|||+    ||+|.+|...++.+...|++|+++++++++.+
T Consensus        30 ~~~~~vlI~----gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2          30 PQDGEIVVT----GASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             GGGCEEEES----STTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             cCCCcEEEE----eCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            346789999    99999999999988899999999999886544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.10  E-value=0.00014  Score=55.53  Aligned_cols=96  Identities=18%  Similarity=0.188  Sum_probs=61.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHH-Hhh---hc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV-GNV---VG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l-~~~---l~  149 (250)
                      +.+|||+    ||+|.+|.+.++.....|++|+++++++++.+.+           ...+...+. |.++. .+.   ..
T Consensus        24 ~~~VLV~----gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-----------~~lGad~vi-~~~~~~~~~~~~~~   87 (167)
T d1tt7a2          24 KGSVLVT----GATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-----------KQLGASEVI-SREDVYDGTLKALS   87 (167)
T ss_dssp             GCCEEEE----STTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-----------HHHTCSEEE-EHHHHCSSCCCSSC
T ss_pred             CCEEEEe----CCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-----------HhhcccceE-eccchhchhhhccc
Confidence            4579999    9999999999998888899999999998766533           222333222 22221 111   23


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +..+|+|+++.|-.  .....++.++.  -.++|.++..+
T Consensus        88 ~~gvd~vid~vgg~--~~~~~~~~l~~--~G~iv~~G~~~  123 (167)
T d1tt7a2          88 KQQWQGAVDPVGGK--QLASLLSKIQY--GGSVAVSGLTG  123 (167)
T ss_dssp             CCCEEEEEESCCTH--HHHHHHTTEEE--EEEEEECCCSS
T ss_pred             CCCceEEEecCcHH--HHHHHHHHhcc--CceEEEeeccC
Confidence            34699999998732  22334444443  24788776544

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.03  E-value=0.0054  Score=45.37  Aligned_cols=92  Identities=16%  Similarity=0.165  Sum_probs=54.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~  149 (250)
                      |||-|+    ||||++|+.+++.|+++.    .++..++.+...-. ...        ....... ....|.+.    +.
T Consensus         1 mKVaIi----GATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk-~~~--------~~~~~~~~~~~~~~~~----~~   63 (147)
T d1mb4a1           1 MRVGLV----GWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP-APN--------FGKDAGMLHDAFDIES----LK   63 (147)
T ss_dssp             CEEEEE----SCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB-CCC--------SSSCCCBCEETTCHHH----HT
T ss_pred             CEEEEE----CCccHHHHHHHHHHHhcCCCCceEEEEecccccccc-ccc--------cCCcceeeecccchhh----hc
Confidence            589999    999999999999988753    45655554432111 110        0111111 11123333    33


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCC-EEEEEcC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVK-QFLFISS  187 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~-~~v~iSS  187 (250)
                      +  +|+|+.+.+..  ....+.+.+.+.|.+ .+|=.|+
T Consensus        64 ~--~DvvF~alp~~--~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          64 Q--LDAVITCQGGS--YTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             T--CSEEEECSCHH--HHHHHHHHHHHTTCCSEEEESSS
T ss_pred             c--ccEEEEecCch--HHHHHhHHHHHcCCceEEEeCCc
Confidence            3  69999998743  355667777777764 4555665

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.03  E-value=0.00024  Score=54.51  Aligned_cols=95  Identities=15%  Similarity=0.218  Sum_probs=61.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eC--CH----HH
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WG--DP----AE  143 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~--D~----~~  143 (250)
                      .+.+|||+    |+ |.+|...++.+...|. +|+++++++++.+..           ...+.. ++ ..  |.    +.
T Consensus        28 ~G~~VlV~----Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-----------~~lGa~~vi~~~~~~~~~~~~~   91 (182)
T d1vj0a2          28 AGKTVVIQ----GA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-----------EEIGADLTLNRRETSVEERRKA   91 (182)
T ss_dssp             BTCEEEEE----CC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-----------HHTTCSEEEETTTSCHHHHHHH
T ss_pred             CCCEEEEE----CC-Cccchhheeccccccccccccccccccccccc-----------ccccceEEEeccccchHHHHHH
Confidence            45799999    86 8999999999999997 799999987655422           111222 22 22  22    22


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      +.+...+..+|+||++.|.. ......++.++..  +++++++
T Consensus        92 i~~~~~~~g~Dvvid~vG~~-~~~~~a~~~l~~~--G~iv~~G  131 (182)
T d1vj0a2          92 IMDITHGRGADFILEATGDS-RALLEGSELLRRG--GFYSVAG  131 (182)
T ss_dssp             HHHHTTTSCEEEEEECSSCT-THHHHHHHHEEEE--EEEEECC
T ss_pred             HHHhhCCCCceEEeecCCch-hHHHHHHHHhcCC--CEEEEEe
Confidence            34444455699999999852 2234445555443  4788766

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.0005  Score=52.10  Aligned_cols=97  Identities=19%  Similarity=0.259  Sum_probs=61.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC---CHHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---DPAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~---D~~~l~~  146 (250)
                      ..+.+|+|+    |+ |.+|...++.+...|. +|+++++++++.+..+           ..+.+ ++..   |..+..+
T Consensus        25 ~~gd~VlI~----G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-----------~~Ga~~~~~~~~~~~~~~~~   88 (171)
T d1pl8a2          25 TLGHKVLVC----GA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-----------EIGADLVLQISKESPQEIAR   88 (171)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-----------HTTCSEEEECSSCCHHHHHH
T ss_pred             CCCCEEEEE----CC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-----------HhCCcccccccccccccccc
Confidence            345789999    76 9999999999999998 7999998876544221           12222 1222   2333443


Q ss_pred             hh---cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          147 VV---GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       147 ~l---~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+   .+..+|+||++.|.. ......++.++.  -+++++++-
T Consensus        89 ~~~~~~g~g~Dvvid~~G~~-~~~~~a~~~~~~--gG~iv~~G~  129 (171)
T d1pl8a2          89 KVEGQLGCKPEVTIECTGAE-ASIQAGIYATRS--GGTLVLVGL  129 (171)
T ss_dssp             HHHHHHTSCCSEEEECSCCH-HHHHHHHHHSCT--TCEEEECSC
T ss_pred             cccccCCCCceEEEeccCCc-hhHHHHHHHhcC--CCEEEEEec
Confidence            33   234589999999842 233334444544  247887763

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.01  E-value=0.0011  Score=50.74  Aligned_cols=99  Identities=21%  Similarity=0.236  Sum_probs=61.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc--cccCCCCCC-CcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN--SDKMKKPPF-NRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~--~~~~~~~~~-~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      |+|.|+    | +|-.|.+++..|.++|++|++..|..+.  .+.+.+... ..+. ........ . -.+++.+++++ 
T Consensus         1 MkI~Vi----G-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~-~~~~~~~i-~-~~~~~~~~~~~-   71 (180)
T d1txga2           1 MIVSIL----G-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLG-VKLNGVEI-F-WPEQLEKCLEN-   71 (180)
T ss_dssp             CEEEEE----S-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTT-BCCCSEEE-E-CGGGHHHHHTT-
T ss_pred             CEEEEE----C-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhc-chhccccc-c-ccccHHHHHhc-
Confidence            689999    5 6999999999999999999999985432  333322211 1111 00011111 1 15667888877 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCC-CCEEEEE
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSG-VKQFLFI  185 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~-~~~~v~i  185 (250)
                       .|+||.+..  ..+.+.+++.++..- -+.+|.+
T Consensus        72 -ad~Ii~avp--s~~~~~~~~~l~~~l~~~~ii~~  103 (180)
T d1txga2          72 -AEVVLLGVS--TDGVLPVMSRILPYLKDQYIVLI  103 (180)
T ss_dssp             -CSEEEECSC--GGGHHHHHHHHTTTCCSCEEEEC
T ss_pred             -cchhhcccc--hhhhHHHHHhhccccccceeccc
Confidence             598887654  566777777776632 3344443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.95  E-value=0.00032  Score=52.28  Aligned_cols=101  Identities=24%  Similarity=0.326  Sum_probs=62.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |||.|+    | .|.+|..++..|+.+|  .++++++++++..+..... ...-.........+..+|.+++    ++  
T Consensus         2 kKI~II----G-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~D-l~~a~~~~~~~~~~~~~d~~~l----~~--   69 (146)
T d1hyha1           2 RKIGII----G-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQID-FQDAMANLEAHGNIVINDWAAL----AD--   69 (146)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-HHHHGGGSSSCCEEEESCGGGG----TT--
T ss_pred             CeEEEE----C-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHh-hhccccccCCccceeccCHHHh----cc--
Confidence            789999    8 5999999999999887  5899999876543221100 0000001122344555666554    44  


Q ss_pred             ccEEEeCCCc------------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNGK------------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag~------------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||-++|.                  |....+.+.+.+++.+.+-++.+-|
T Consensus        70 adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            5999999882                  3445677777777766555554443

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.92  E-value=0.00037  Score=53.85  Aligned_cols=103  Identities=12%  Similarity=0.122  Sum_probs=56.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE-EEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~  149 (250)
                      ..+|||+    ||+|.+|...++.+...|.++++ +++++++...+.+        ....+..+...+   .+.+.+. .
T Consensus        31 ~etVLI~----gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~--------~~gad~vi~~~~~~~~~~~~~~-~   97 (187)
T d1vj1a2          31 NQTMVVS----GAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTS--------ELGFDAAVNYKTGNVAEQLREA-C   97 (187)
T ss_dssp             CCEEEES----STTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHH--------HSCCSEEEETTSSCHHHHHHHH-C
T ss_pred             CCEEEEE----CCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhh--------cccceEEeeccchhHHHHHHHH-h
Confidence            4789999    99999999999988888976555 4555443322110        011122222222   3334443 3


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ...+|+|+++.|-  ......++.++.  -++++.++.++.|..
T Consensus        98 ~~GvDvv~D~vGg--~~~~~~~~~l~~--~G~iv~~G~~s~~~~  137 (187)
T d1vj1a2          98 PGGVDVYFDNVGG--DISNTVISQMNE--NSHIILCGQISQYNK  137 (187)
T ss_dssp             TTCEEEEEESSCH--HHHHHHHTTEEE--EEEEEEC--------
T ss_pred             ccCceEEEecCCc--hhHHHHhhhccc--cccEEEecccccccc
Confidence            4469999999983  223344444433  358898887665543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.90  E-value=0.002  Score=47.54  Aligned_cols=94  Identities=16%  Similarity=0.206  Sum_probs=54.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +++|-|+    ||||++|+.+++.|.+++   .++..+..+...-+.+.         ....+......+.++    +.+
T Consensus         2 ~mnVaIv----GATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~---------~~~~~~~~~~~~~~~----~~~   64 (144)
T d2hjsa1           2 PLNVAVV----GATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG---------FAESSLRVGDVDSFD----FSS   64 (144)
T ss_dssp             CCCEEEE----TTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE---------ETTEEEECEEGGGCC----GGG
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee---------eccccchhccchhhh----hcc
Confidence            5789999    999999999999887655   46776654432222110         001111111111221    222


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                        +|+++-+++  -.....+...+.+.|. ++|=.|+..
T Consensus        65 --~d~vf~a~p--~~~s~~~~~~~~~~g~-~VID~Ss~f   98 (144)
T d2hjsa1          65 --VGLAFFAAA--AEVSRAHAERARAAGC-SVIDLSGAL   98 (144)
T ss_dssp             --CSEEEECSC--HHHHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             --ceEEEecCC--cchhhhhccccccCCc-eEEeechhh
Confidence              699998876  3335555556666665 677667643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.88  E-value=0.0006  Score=50.42  Aligned_cols=101  Identities=16%  Similarity=0.203  Sum_probs=63.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCCHHHHHhhhcCCc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGDPAEVGNVVGGVT  152 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D~~~l~~~l~~~~  152 (250)
                      +||-|+    |+ |.+|..++..|+.++ .++.+++..++........ ...-.........+. ..|.+++    .+  
T Consensus         2 ~KI~II----Ga-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~D-l~~~~~~~~~~~~i~~~~d~~~~----~~--   69 (142)
T d1uxja1           2 KKISII----GA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALD-LYEASPIEGFDVRVTGTNNYADT----AN--   69 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHH-HHTTHHHHTCCCCEEEESCGGGG----TT--
T ss_pred             CeEEEE----CC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHH-hhccccccCCCCEEEecCcHHHh----cC--
Confidence            689999    85 999999999998877 5899998877543321100 000001112223333 3455543    33  


Q ss_pred             ccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          153 FDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       153 ~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+||-++|              .|....+.+++...+.+.+-++.+-|
T Consensus        70 advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          70 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             CSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             CCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            499999998              24666788888888866555555543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00042  Score=52.73  Aligned_cols=42  Identities=17%  Similarity=0.177  Sum_probs=35.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      .++|+|||.    | +|+.+++++..|.+.|.+|+++.|+.++.+.+
T Consensus        16 ~~~k~vlIl----G-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l   57 (170)
T d1nyta1          16 RPGLRILLI----G-AGGASRGVLLPLLSLDCAVTITNRTVSRAEEL   57 (170)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             CCCCEEEEE----C-CcHHHHHHHHHhcccceEEEeccchHHHHHHH
Confidence            356899999    5 68999999999999999999999988665543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.87  E-value=0.007  Score=42.36  Aligned_cols=93  Identities=18%  Similarity=0.133  Sum_probs=61.4

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..+++|||+    | .|.+|..-++.|++.|.+|++++...... ..+          .....++++..+.+.  +.+.+
T Consensus        10 l~~k~vlVv----G-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~----------~~~~~i~~~~~~~~~--~dl~~   72 (113)
T d1pjqa1          10 LRDRDCLIV----G-GGDVAERKARLLLEAGARLTVNALTFIPQFTVW----------ANEGMLTLVEGPFDE--TLLDS   72 (113)
T ss_dssp             CBTCEEEEE----C-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHH----------HTTTSCEEEESSCCG--GGGTT
T ss_pred             eCCCEEEEE----C-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHH----------HhcCCceeeccCCCH--HHhCC
Confidence            357899999    5 69999999999999999999998654221 111          112345555544221  12344


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                        .+.|+.+.+ +-.....+...|++.|+  +|++.
T Consensus        73 --~~lv~~at~-d~~~n~~i~~~a~~~~i--lVNv~  103 (113)
T d1pjqa1          73 --CWLAIAATD-DDTVNQRVSDAAESRRI--FCNVV  103 (113)
T ss_dssp             --CSEEEECCS-CHHHHHHHHHHHHHTTC--EEEET
T ss_pred             --CcEEeecCC-CHHHHHHHHHHHHHcCC--EEEeC
Confidence              577776644 45556678888998765  67654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.82  E-value=0.00067  Score=50.87  Aligned_cols=103  Identities=17%  Similarity=0.204  Sum_probs=63.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccc---hhcCCceEEeCCHHHHHhh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~---~~~~~v~~v~~D~~~l~~~  147 (250)
                      .+++||.|+    |+ |.+|..++..|...+ .++++++.+++..+....    .+..   ...........  .+.++.
T Consensus         5 ~k~~KI~II----Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~----Dl~~~~~~~~~~~~~~~~--~~~~~~   73 (154)
T d1pzga1           5 QRRKKVAMI----GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKAL----DLSHVTSVVDTNVSVRAE--YSYEAA   73 (154)
T ss_dssp             SCCCEEEEE----CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHH----HHHHHHHHTTCCCCEEEE--CSHHHH
T ss_pred             cCCCcEEEE----CC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHH----HHhhhccccCCeeEEecc--Cchhhh
Confidence            456899999    86 999999998888777 589999887754432110    0000   01111122221  122345


Q ss_pred             hcCCcccEEEeCCCc-------------------CHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          148 VGGVTFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      +++  .|+|+-++|.                   |....+.+++.+++.+.+-++.+-|
T Consensus        74 ~~~--adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          74 LTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             HTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             hcC--CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            555  5999998872                   3455777788777766555555444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.81  E-value=0.00034  Score=51.91  Aligned_cols=98  Identities=15%  Similarity=0.188  Sum_probs=62.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccc---hhcCCceEEe-CCHHHHHhhh
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNE---IVSAGGKTVW-GDPAEVGNVV  148 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~---~~~~~v~~v~-~D~~~l~~~l  148 (250)
                      |||.|+    |+ |.+|..++..|+.+|  .++.+++++++..+....    .+..   .......+.. .|.+    .+
T Consensus         1 MKI~II----Ga-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~al----Dl~~~~~~~~~~~~i~~~~d~~----~~   67 (142)
T d1ojua1           1 MKLGFV----GA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAM----DLAHAAAGIDKYPKIVGGADYS----LL   67 (142)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHH----HHHHHHHTTTCCCEEEEESCGG----GG
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHH----HHhhhccccCCCCccccCCCHH----Hh
Confidence            689999    86 999999999999887  579999987654321100    0000   0111223332 3554    34


Q ss_pred             cCCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+  .|+||-.+|              .|..-.+.+.+.+++.+.+-++.+-|
T Consensus        68 ~~--adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          68 KG--SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             TT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cc--ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            44  599999988              25666777888888876555555444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.79  E-value=0.00049  Score=50.83  Aligned_cols=98  Identities=21%  Similarity=0.274  Sum_probs=63.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeCCHHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      |||.|+    |+ |.+|..++..|+.+|  .++.+++++++..+....    .+..  ..........+|.++    +++
T Consensus         1 mKI~II----Ga-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~----Dl~~~~~~~~~~~~~~~~~~~----~~~   67 (140)
T d1a5za1           1 MKIGIV----GL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDAL----DLIHGTPFTRRANIYAGDYAD----LKG   67 (140)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH----HHHHHGGGSCCCEEEECCGGG----GTT
T ss_pred             CEEEEE----Cc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhc----cccccccccccccccCCcHHH----hcC
Confidence            689999    86 999999999998887  689999987644332100    0000  011233444455544    445


Q ss_pred             CcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          151 VTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       151 ~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                        .|+|+-++|              .|..-.+.+++.+.+.+.+-++.+-|
T Consensus        68 --adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          68 --SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             --CCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence              599999998              25666777888888866555555443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.76  E-value=0.0007  Score=51.16  Aligned_cols=103  Identities=14%  Similarity=0.174  Sum_probs=63.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      .+.+||-|+    |+ |.+|..++..|+.+|.  ++.+++++++........ +..-..........-.+|.++    +.
T Consensus        18 ~~~~KV~II----Ga-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alD-l~h~~~~~~~~~~~~~~d~~~----~~   87 (160)
T d1i0za1          18 VPNNKITVV----GV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMD-LQHGSLFLQTPKIVADKDYSV----TA   87 (160)
T ss_dssp             CCSSEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHH-HHHTGGGCCCSEEEECSSGGG----GT
T ss_pred             CCCCeEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHH-HhccccccCCCeEEeccchhh----cc
Confidence            345799999    85 9999999999999984  899999876443211000 000000111122233345554    33


Q ss_pred             CCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCE-EEEEc
Q 025587          150 GVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQ-FLFIS  186 (250)
Q Consensus       150 ~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~-~v~iS  186 (250)
                      +  .|+||..||              .|....+.+++.+++.+.+- +|.+|
T Consensus        88 ~--adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          88 N--SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             c--ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            4  599999998              25667778888888866544 44444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.74  E-value=0.0016  Score=49.76  Aligned_cols=101  Identities=17%  Similarity=0.116  Sum_probs=54.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEE-cCCCc-c-ccCCCCCCCcccchh-cCCceEEeCCHHHHHhhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDEN-S-DKMKKPPFNRFNEIV-SAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~-R~~~~-~-~~~~~~~~~~~~~~~-~~~v~~v~~D~~~l~~~l  148 (250)
                      |++|.|+    ||||++|..|++.|.+. ..++..+. +..+. . +.+..    ....+. ..+......  ++.....
T Consensus         1 MikVaIi----GATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~----~~~~~~~~~~~~~~~~--~~~~~~~   70 (179)
T d2g17a1           1 MLNTLIV----GASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISD----LHPQLKGIVDLPLQPM--SDVRDFS   70 (179)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHH----HCGGGTTTCCCBEEEE--SCGGGTC
T ss_pred             CcEEEEE----CcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccc----cccccccccccccccc--hhhhhhh
Confidence            5799999    99999999999999987 56776554 32211 1 11000    000000 011111111  1111222


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      .  .+|+|+.+.+.  ......+..+.+.+. ++|=.|+..
T Consensus        71 ~--~~dvvf~alp~--~~s~~~~~~~~~~~~-~vIDlSadf  106 (179)
T d2g17a1          71 A--DVDVVFLATAH--EVSHDLAPQFLQAGC-VVFDLSGAF  106 (179)
T ss_dssp             T--TCCEEEECSCH--HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             c--ccceeeccccc--hhHHHHhhhhhhcCc-eeecccccc
Confidence            2  37999988763  234445555666565 677777643

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0013  Score=49.74  Aligned_cols=99  Identities=16%  Similarity=0.204  Sum_probs=59.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      .++|.|.    |++|.+|+.+++.+.+. +.++++.. |......   ......+......++.. ..|   +.++++. 
T Consensus         4 ~ikI~i~----Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~---g~d~~~~~~~~~~~~~~-~~~---~~~~~~~-   71 (162)
T d1diha1           4 NIRVAIA----GAGGRMGRQLIQAALALEGVQLGAALEREGSSLL---GSDAGELAGAGKTGVTV-QSS---LDAVKDD-   71 (162)
T ss_dssp             BEEEEET----TTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC---SCCTTCSSSSSCCSCCE-ESC---STTTTTS-
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecccchhc---cchhhhhhccccCCcee-ecc---HHHHhcc-
Confidence            4689999    99999999999999876 67765543 3321111   00001111111122222 222   2334444 


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                       +|+||++.  ..+.+...+++|.+.++ .+| ++|+|
T Consensus        72 -~DViIDFs--~p~~~~~~~~~a~~~~~-~~V-iGTTG  104 (162)
T d1diha1          72 -FDVFIDFT--RPEGTLNHLAFCRQHGK-GMV-IGTTG  104 (162)
T ss_dssp             -CSEEEECS--CHHHHHHHHHHHHHTTC-EEE-ECCCC
T ss_pred             -cceEEEec--cHHHHHHHHHHHHhccc-eeE-EecCC
Confidence             79999995  47888999999999886 444 34444

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.67  E-value=0.0015  Score=49.24  Aligned_cols=97  Identities=15%  Similarity=0.213  Sum_probs=60.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCc-eEEeC-C---HHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWG-D---PAEVG  145 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~-D---~~~l~  145 (250)
                      ....+|+|+    |++|.+|...++.+...| .+|+++++++++.+..           ...+. .++.. +   .+.+.
T Consensus        26 ~~g~~vlV~----G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-----------~~~Ga~~~i~~~~~~~~~~~~   90 (170)
T d1jvba2          26 DPTKTLLVV----GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-----------KRAGADYVINASMQDPLAEIR   90 (170)
T ss_dssp             CTTCEEEEE----TTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-----------HHHTCSEEEETTTSCHHHHHH
T ss_pred             CCCCEEEEE----eccccceeeeeecccccccccccccccchhhHHHH-----------HHcCCceeeccCCcCHHHHHH
Confidence            346799999    999999999999998888 5888888887554422           11122 22222 2   34444


Q ss_pred             hhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          146 NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       146 ~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      +...+..+|+||++.|.. ......++.++..  ++++.++
T Consensus        91 ~~~~~~~~d~vid~~g~~-~~~~~a~~~l~~~--G~iv~~G  128 (170)
T d1jvba2          91 RITESKGVDAVIDLNNSE-KTLSVYPKALAKQ--GKYVMVG  128 (170)
T ss_dssp             HHTTTSCEEEEEESCCCH-HHHTTGGGGEEEE--EEEEECC
T ss_pred             HHhhcccchhhhcccccc-hHHHhhhhhcccC--CEEEEec
Confidence            444455699999998732 1122223333332  4777765

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.0027  Score=46.97  Aligned_cols=99  Identities=23%  Similarity=0.243  Sum_probs=59.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHh-C--CCeEEEEEcCCCccccCCCCCCCcccchh-cCCceEEeCCHHHHHhhhcC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLG-S--GHEVTIMTVGDENSDKMKKPPFNRFNEIV-SAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~-~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~-~~~v~~v~~D~~~l~~~l~~  150 (250)
                      |||.|+    |++|.+|..++..|.. .  +.++.+++..+ ..+...    ..+.... ......+.+ ..+. +.+++
T Consensus         1 MKV~Ii----GaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a----~Dl~h~~~~~~~~~~~~-~~~~-~~~~~   69 (145)
T d2cmda1           1 MKVAVL----GAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVA----VDLSHIPTAVKIKGFSG-EDAT-PALEG   69 (145)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHH----HHHHTSCSSCEEEEECS-SCCH-HHHTT
T ss_pred             CEEEEE----cCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHH----HHHHCCccccCCcEEEc-CCCc-cccCC
Confidence            689999    9999999999988753 3  48899998653 221100    0000000 111222222 2222 23555


Q ss_pred             CcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCE-EEEEc
Q 025587          151 VTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQ-FLFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~-~v~iS  186 (250)
                        .|+||-++|              .|....+.+.+.+.+.+.+. +|.+|
T Consensus        70 --aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          70 --ADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             --CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             --CCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence              499999999              36677888888888866444 45444

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.61  E-value=0.0045  Score=42.35  Aligned_cols=85  Identities=20%  Similarity=0.270  Sum_probs=55.4

Q ss_pred             cCcEEEEEecCCCcchhhH-HHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhcC
Q 025587           73 EKKKVLIVNTNSGGHAVIG-FYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGG  150 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG-~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~~  150 (250)
                      ..++|.++    | -|.+| +.||+.|.++||+|.+-|+......          ..+...++.+..++ ++.+    .+
T Consensus         7 ~~~~ihfi----G-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~----------~~L~~~Gi~v~~g~~~~~i----~~   67 (96)
T d1p3da1           7 RVQQIHFI----G-IGGAGMSGIAEILLNEGYQISGSDIADGVVT----------QRLAQAGAKIYIGHAEEHI----EG   67 (96)
T ss_dssp             TCCEEEEE----T-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHH----------HHHHHTTCEEEESCCGGGG----TT
T ss_pred             hCCEEEEE----E-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhh----------hHHHHCCCeEEECCccccC----CC
Confidence            45789988    3 34444 6689999999999999998753222          12445677766665 4332    33


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                        .|.||...++..+  ..-+.+|++.|++
T Consensus        68 --~d~vV~S~AI~~~--npel~~A~~~gip   93 (96)
T d1p3da1          68 --ASVVVVSSAIKDD--NPELVTSKQKRIP   93 (96)
T ss_dssp             --CSEEEECTTSCTT--CHHHHHHHHTTCC
T ss_pred             --CCEEEECCCcCCC--CHHHHHHHHcCCC
Confidence              6888888775322  2235567777764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0017  Score=45.83  Aligned_cols=66  Identities=17%  Similarity=0.142  Sum_probs=46.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC---CHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG---DPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---D~~~l~~~l~~  150 (250)
                      ..||.|+    | .|++|+-++....+.|++|++++.+++.....          +   .-.++.+   |.+.+.+....
T Consensus        11 ~~kigIl----G-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~----------v---a~~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2          11 ATRVMLL----G-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH----------V---AHRSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             CCEEEEE----S-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG----------G---SSEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEE----e-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh----------c---CCeEEECCCCCHHHHHHHHHh
Confidence            4589999    6 69999999999999999999999887543311          0   1123333   57777776654


Q ss_pred             CcccEEE
Q 025587          151 VTFDVVL  157 (250)
Q Consensus       151 ~~~d~Vi  157 (250)
                      ..+|+|-
T Consensus        73 ~~~DviT   79 (111)
T d1kjqa2          73 EKPHYIV   79 (111)
T ss_dssp             HCCSEEE
T ss_pred             hCCceEE
Confidence            3468775

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.59  E-value=0.0017  Score=49.88  Aligned_cols=100  Identities=16%  Similarity=0.151  Sum_probs=60.0

Q ss_pred             CcEEEE-EecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEE-eCC-------HHHH
Q 025587           74 KKKVLI-VNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTV-WGD-------PAEV  144 (250)
Q Consensus        74 ~~~VlV-t~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v-~~D-------~~~l  144 (250)
                      +.+|+| .    ||+|.+|...++.....|.+|++++|+.+..+...       ..+...+...+ ..|       .+.+
T Consensus        29 g~~vli~~----ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~-------~~~~~lGad~vi~~~~~~~~~~~~~v   97 (189)
T d1gu7a2          29 GKDWFIQN----GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVV-------ASLKELGATQVITEDQNNSREFGPTI   97 (189)
T ss_dssp             TTCEEEES----CTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHH-------HHHHHHTCSEEEEHHHHHCGGGHHHH
T ss_pred             CCEEEEEe----CCCchHHHHHHHHHhhcCCeEEEEEecccccchHH-------hhhhhccccEEEeccccchhHHHHHH
Confidence            345666 7    88999999999988888999999998876544211       11122233322 211       1223


Q ss_pred             Hhhh--cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          145 GNVV--GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       145 ~~~l--~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .+..  .+..+|+|+++.|-  ......++.++.  -+++|.++.+
T Consensus        98 ~~~~~~~g~~vdvv~D~vg~--~~~~~~~~~l~~--~G~~v~~G~~  139 (189)
T d1gu7a2          98 KEWIKQSGGEAKLALNCVGG--KSSTGIARKLNN--NGLMLTYGGM  139 (189)
T ss_dssp             HHHHHHHTCCEEEEEESSCH--HHHHHHHHTSCT--TCEEEECCCC
T ss_pred             HHHHhhccCCceEEEECCCc--chhhhhhhhhcC--CcEEEEECCc
Confidence            3332  23458999999873  233445555544  3588877643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.59  E-value=0.00094  Score=49.40  Aligned_cols=96  Identities=17%  Similarity=0.209  Sum_probs=61.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCC--CccccCCCCCCCcccc--hhcCCceEEeCCHHHHHhhhc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGD--ENSDKMKKPPFNRFNE--IVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~--~~~~~~~~~~~~~~~~--~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      ||.|+    ||+|.+|..++..|+.+|  .++.+++...  +......    ..+..  ......++..+|.+++    .
T Consensus         2 KV~Ii----GaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a----~Dl~~~~~~~~~~~i~~~~~~~~----~   69 (142)
T d1o6za1           2 KVSVV----GAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQA----ADTNHGIAYDSNTRVRQGGYEDT----A   69 (142)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHH----HHHHHHHTTTCCCEEEECCGGGG----T
T ss_pred             eEEEE----CCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceee----cchhhcccccCCceEeeCCHHHh----h
Confidence            79999    999999999999999998  4788888532  1111000    00110  0122334445666543    4


Q ss_pred             CCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          150 GVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       150 ~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      +  .|+||-+||              .|..-.+.+++..++.+.+-++.+
T Consensus        70 ~--aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv  117 (142)
T d1o6za1          70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT  117 (142)
T ss_dssp             T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred             h--cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            4  599999998              356678888888888765544443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.56  E-value=0.0037  Score=45.62  Aligned_cols=75  Identities=16%  Similarity=0.301  Sum_probs=51.3

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      ||.|.    |++|.+|+.+++.+.+. ++++.... ++.                           +...    +....+
T Consensus         1 kI~v~----Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~---------------------------~~~~----~~~~~~   45 (135)
T d1yl7a1           1 RVGVL----GAKGKVGATMVRAVAAADDLTLSAELDAGD---------------------------PLSL----LTDGNT   45 (135)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHHSTTSEEEEEECTTC---------------------------CTHH----HHTTTC
T ss_pred             CEEEE----CCCCHHHHHHHHHHHhCCCCEEEEEEecCC---------------------------chhh----hccccC
Confidence            68999    99999999999987765 67766543 221                           0111    111237


Q ss_pred             cEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          154 DVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       154 d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      |+||++.  +.+.+...++.|.+.|+. +| ++|+|
T Consensus        46 DvvIDFS--~p~~~~~~~~~~~~~~~~-~V-iGTTG   77 (135)
T d1yl7a1          46 EVVIDFT--HPDVVMGNLEFLIDNGIH-AV-VGTTG   77 (135)
T ss_dssp             SEEEECC--CTTTHHHHHHHHHHTTCE-EE-ECCCC
T ss_pred             CEEEEcc--cHHHHHHHHHHHHhcCCC-EE-Eeccc
Confidence            9999986  467788888999888874 33 35544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.50  E-value=0.0015  Score=49.71  Aligned_cols=97  Identities=12%  Similarity=0.087  Sum_probs=62.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-C---HHHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-D---PAEV  144 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-D---~~~l  144 (250)
                      .....+|+|.    |+ |.+|...++.+...|. +|+++++++++.+..           ...+.. ++.. |   .+.+
T Consensus        25 ~~~g~~VlI~----Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-----------~~lGa~~~i~~~~~~~~~~v   88 (174)
T d1jqba2          25 IEMGSSVVVI----GI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-----------KFYGATDILNYKNGHIEDQV   88 (174)
T ss_dssp             CCTTCCEEEE----CC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-----------HHHTCSEEECGGGSCHHHHH
T ss_pred             CCCCCEEEEE----cC-CcchhhhhhhhhcccccccccccchhhhHHHH-----------HhhCccccccccchhHHHHH
Confidence            3456789999    75 9999999999998996 799888877544321           112222 2211 2   4556


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      .+...+..+|+||++.|.. ......++.++.  -.+++.++
T Consensus        89 ~~~t~g~G~D~vid~~g~~-~~~~~a~~~~~~--~G~iv~~G  127 (174)
T d1jqba2          89 MKLTNGKGVDRVIMAGGGS-ETLSQAVKMVKP--GGIISNIN  127 (174)
T ss_dssp             HHHTTTSCEEEEEECSSCT-THHHHHHHHEEE--EEEEEECC
T ss_pred             HHHhhccCcceEEEccCCH-HHHHHHHHHHhc--CCEEEEEe
Confidence            6666666699999999853 222334555544  24677765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.46  E-value=0.0051  Score=45.35  Aligned_cols=36  Identities=28%  Similarity=0.289  Sum_probs=31.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      |||-|+     |.|.+|+.+++.|+++||+|++.++.++..
T Consensus         1 MkIgiI-----G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           1 LRVGFI-----GFGEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             CEEEEE-----SCSHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             CEEEEE-----cHHHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            589999     589999999999999999999988776543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.45  E-value=0.0012  Score=50.55  Aligned_cols=82  Identities=17%  Similarity=0.159  Sum_probs=52.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVG  149 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~  149 (250)
                      ...++|+|+    | +|..|++++..|.+.|. +++++.|+.+..+..... ..++.......+. ..+.|.+.+.+.+.
T Consensus        16 l~~k~vlIl----G-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          16 IKGKTMVLL----G-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAF-AQRVNENTDCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHH-HHHHHHHSSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCCEEEEE----C-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHH-HHHHHhhcCcceEeeecccccchhhhhc
Confidence            356899999    5 58999999999999985 788999987655432110 0001111111122 23446777777776


Q ss_pred             CCcccEEEeCCC
Q 025587          150 GVTFDVVLDNNG  161 (250)
Q Consensus       150 ~~~~d~Vi~~ag  161 (250)
                      .  +|.||++..
T Consensus        90 ~--~diiIN~Tp   99 (182)
T d1vi2a1          90 S--ADILTNGTK   99 (182)
T ss_dssp             T--CSEEEECSS
T ss_pred             c--cceeccccC
Confidence            6  699999865

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.44  E-value=0.0014  Score=48.47  Aligned_cols=96  Identities=14%  Similarity=0.197  Sum_probs=61.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccc--hhcCCceEEeC-CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNE--IVSAGGKTVWG-DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~v~~v~~-D~~~l~~~l~  149 (250)
                      .||.|+    |+ |.+|..++..|+.+|  .++++++++++..+....    .+..  .......+... |.++    ++
T Consensus         2 ~Ki~II----Ga-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~----Dl~~a~~~~~~~~i~~~~~~~~----~~   68 (143)
T d1llda1           2 TKLAVI----GA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVL----DMQHGSSFYPTVSIDGSDDPEI----CR   68 (143)
T ss_dssp             CEEEEE----CC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHH----HHHHTGGGSTTCEEEEESCGGG----GT
T ss_pred             CEEEEE----CC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHH----HHHhccccCCCceeecCCCHHH----hh
Confidence            589999    86 999999999999988  489999987644321100    0000  01112333333 3433    44


Q ss_pred             CCcccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          150 GVTFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       150 ~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      +  .|+||-++|              .|..-.+.+++.+++.+.+-++.+
T Consensus        69 d--aDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          69 D--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             C--CcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            4  599999999              356677888888888665444443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.42  E-value=0.0063  Score=43.90  Aligned_cols=74  Identities=22%  Similarity=0.264  Sum_probs=50.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      |||.|.    |++|.+|+.+++.+.++|+++.+..-.. ..                              +.+..  +|
T Consensus         1 mki~i~----G~~GrMG~~i~~~~~~~~~~l~~~id~~-~~------------------------------~~~~~--~D   43 (128)
T d1vm6a3           1 MKYGIV----GYSGRMGQEIQKVFSEKGHELVLKVDVN-GV------------------------------EELDS--PD   43 (128)
T ss_dssp             CEEEEE----TTTSHHHHHHHHHHHHTTCEEEEEEETT-EE------------------------------EECSC--CS
T ss_pred             CEEEEE----CCCCHHHHHHHHHHhcCCCeEEEEECCC-cH------------------------------HHhcc--CC
Confidence            589999    9999999999999999999987643111 00                              00122  58


Q ss_pred             EEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          155 VVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       155 ~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +||++.  ..+.+...++.|.+.++ .+| ++|+|
T Consensus        44 VvIDFS--~p~~~~~~l~~~~~~~~-p~V-iGTTG   74 (128)
T d1vm6a3          44 VVIDFS--SPEALPKTVDLCKKYRA-GLV-LGTTA   74 (128)
T ss_dssp             EEEECS--CGGGHHHHHHHHHHHTC-EEE-ECCCS
T ss_pred             EEEEec--CHHHHHHHHHHHHhcCC-CEE-EEcCC
Confidence            888875  36677778888877776 333 34444

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.41  E-value=0.0031  Score=47.73  Aligned_cols=89  Identities=19%  Similarity=0.296  Sum_probs=69.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ++-+|+|+    | .|..|..-++.+..-|.+|++++.+.+.++.+        .......+++...+.+.+.+.++.  
T Consensus        31 ~pa~V~Vi----G-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l--------~~~~~~~~~~~~~~~~~l~~~~~~--   95 (168)
T d1pjca1          31 KPGKVVIL----G-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYL--------ETLFGSRVELLYSNSAEIETAVAE--   95 (168)
T ss_dssp             CCCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------HHHHGGGSEEEECCHHHHHHHHHT--
T ss_pred             CCcEEEEE----C-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHH--------HHhhcccceeehhhhhhHHHhhcc--
Confidence            45799999    5 69999999999999999999999988665533        234456688888899999999988  


Q ss_pred             ccEEEeCCCcC-----HHhHHHHHHHHHh
Q 025587          153 FDVVLDNNGKN-----LDAVRPVADWAKS  176 (250)
Q Consensus       153 ~d~Vi~~ag~~-----~~~~~~ll~~~~~  176 (250)
                      .|+||.++=+.     ..-++.+++.||+
T Consensus        96 aDivI~aalipG~~aP~lIt~~mv~~Mk~  124 (168)
T d1pjca1          96 ADLLIGAVLVPGRRAPILVPASLVEQMRT  124 (168)
T ss_dssp             CSEEEECCCCTTSSCCCCBCHHHHTTSCT
T ss_pred             CcEEEEeeecCCcccCeeecHHHHhhcCC
Confidence            69999886521     2236677777766

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.41  E-value=0.029  Score=39.48  Aligned_cols=82  Identities=27%  Similarity=0.306  Sum_probs=55.3

Q ss_pred             cEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      |+|.|+    |++   +..|..+++.|++.||+|+.+....+...                +..+    ..++.++-.  
T Consensus         2 KsIAVv----GaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~----------------G~~~----y~sl~~lp~--   55 (116)
T d1y81a1           2 RKIALV----GASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE----------------GLKC----YRSVRELPK--   55 (116)
T ss_dssp             CEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEEC----BSSGGGSCT--
T ss_pred             cEEEEE----cccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc----------------Cccc----cccchhccc--
Confidence            689999    987   77999999999999999988764432222                1111    111222212  


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .+|.++-+.  ..+.+..+++.+.+.|++.+++
T Consensus        56 ~~D~vvi~v--p~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          56 DVDVIVFVV--PPKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             TCCEEEECS--CHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cceEEEEEe--CHHHHHHHHHHHHhcCCceEEe
Confidence            378777654  4667778888888889987654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.40  E-value=0.002  Score=47.93  Aligned_cols=101  Identities=18%  Similarity=0.246  Sum_probs=60.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEe-CCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW-GDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~D~~~l~~~l~~~  151 (250)
                      +.||-|+    |+ |.+|..++..|+.++ .++.++++.++..+..... ......+......+.. .|.++    +.+ 
T Consensus         3 ~~KI~II----Ga-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~D-l~~~~~~~~~~~~v~~~~~~~~----~~~-   71 (150)
T d1t2da1           3 KAKIVLV----GS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALD-TSHTNVMAYSNCKVSGSNTYDD----LAG-   71 (150)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHH-HHTHHHHHTCCCCEEEECCGGG----GTT-
T ss_pred             CCeEEEE----CC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecc-hhhhccccCCCcEEEecccccc----cCC-
Confidence            4689999    85 999999998887776 6899999877544321100 0000011122333333 23433    344 


Q ss_pred             cccEEEeCCCc-------------------CHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          152 TFDVVLDNNGK-------------------NLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag~-------------------~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                       .|+|+-++|.                   |....+.+++.+++.+.+-++.+-
T Consensus        72 -advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          72 -ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             -CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             -CcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence             5999999882                   344577777777776655544443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.39  E-value=0.0028  Score=47.54  Aligned_cols=38  Identities=32%  Similarity=0.386  Sum_probs=31.7

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCCCccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGDENSD  116 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~~~~~  116 (250)
                      +|+|+|+    | .|.+|..+++.|.+.|+  +|++++|+++..+
T Consensus         1 Mk~I~II----G-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~   40 (171)
T d2g5ca2           1 MQNVLIV----G-VGFMGGSFAKSLRRSGFKGKIYGYDINPESIS   40 (171)
T ss_dssp             CCEEEEE----S-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred             CCEEEEE----c-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHH
Confidence            4689999    5 79999999999999995  7888888875444

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.35  E-value=0.016  Score=43.47  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=50.4

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCC----HHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD----PAE  143 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D----~~~  143 (250)
                      .....+|+|.    |+ |.+|...+..+...| .+|+++++++++.+...+           .+.. .+ ..|    .+.
T Consensus        26 vk~GdtVlV~----Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-----------~Ga~~~i~~~~~~~~~~~   89 (176)
T d2jhfa2          26 VTQGSTCAVF----GL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-----------VGATECVNPQDYKKPIQE   89 (176)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-----------TTCSEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----CC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-----------hCCeeEEecCCchhHHHH
Confidence            3456799999    88 668999999998888 588888888766553221           1222 12 112    334


Q ss_pred             HHhhhcCCcccEEEeCCCc
Q 025587          144 VGNVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~  162 (250)
                      ..+...+..+|++|++.|.
T Consensus        90 ~~~~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          90 VLTEMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             HHHHHTTSCBSEEEECSCC
T ss_pred             HHHHHhcCCCCEEEecCCc
Confidence            4444455569999999984

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=96.35  E-value=0.0025  Score=49.23  Aligned_cols=88  Identities=15%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCC--Ccccch-hcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPF--NRFNEI-VSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~--~~~~~~-~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ++||.|+     |+|-.|.+++..|.+.||+|++.+|+++..+.+.+...  ..++++ ...++. +.   .++.+++++
T Consensus         7 m~KI~Vi-----GaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~-~t---~~l~~a~~~   77 (189)
T d1n1ea2           7 LNKAVVF-----GSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNIT-FT---SDVEKAYNG   77 (189)
T ss_dssp             EEEEEEE-----CCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEE-EE---SCHHHHHTT
T ss_pred             eceEEEE-----CCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccc-cc---hhhhhccCC
Confidence            3579999     57999999999999999999999998765554421110  111111 122332 22   345666766


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHH
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWA  174 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~  174 (250)
                        .|+||-+..  ....+.+++..
T Consensus        78 --ad~iiiavP--s~~~~~~~~~~   97 (189)
T d1n1ea2          78 --AEIILFVIP--TQFLRGFFEKS   97 (189)
T ss_dssp             --CSCEEECSC--HHHHHHHHHHH
T ss_pred             --CCEEEEcCc--HHHHHHHHHHH
Confidence              588887654  44555555544

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.26  E-value=0.015  Score=41.23  Aligned_cols=93  Identities=16%  Similarity=0.097  Sum_probs=61.5

Q ss_pred             cCcEEEEEecCCCc----------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHH
Q 025587           73 EKKKVLIVNTNSGG----------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPA  142 (250)
Q Consensus        73 ~~~~VlVt~~~~Gg----------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~  142 (250)
                      ..++|||+    |+          --+.+.+.++.|.+.||+++++..+++....-  .     +  ....+=+.....+
T Consensus         3 ~~kkvlVi----GsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd--~-----d--~aD~lYfeplt~e   69 (121)
T d1a9xa4           3 DREKIMVL----GGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD--Y-----D--TSDRLYFEPVTLE   69 (121)
T ss_dssp             SSCEEEEE----CCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS--T-----T--SSSEEECCCCSHH
T ss_pred             CCCEEEEE----CCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC--h-----h--hcCceEEccCCHH
Confidence            46799999    66          34788999999999999999999888655421  0     0  0000111122488


Q ss_pred             HHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          143 EVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       143 ~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      .+.++++..++|.|+-..|  -+...++...+.+.|++
T Consensus        70 ~v~~Ii~~E~p~~ii~~~G--GQtalnla~~L~~~gv~  105 (121)
T d1a9xa4          70 DVLEIVRIEKPKGVIVQYG--GQTPLKLARALEAAGVP  105 (121)
T ss_dssp             HHHHHHHHHCCSEEECSSS--THHHHTTHHHHHHTTCC
T ss_pred             HHHHHHHHhCCCEEEeehh--hhhHHHHHHHHHHcCCc
Confidence            8999888778999886665  12234445555666763

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.25  E-value=0.007  Score=42.51  Aligned_cols=39  Identities=26%  Similarity=0.376  Sum_probs=33.9

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      ...+++|+|+    | .|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        19 ~~~p~~v~Ii----G-gG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          19 GEVPKSLVVI----G-GGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             SSCCSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             hhcCCeEEEE----C-CCccceeeeeeecccccEEEEEEeccee
Confidence            3446899999    5 6999999999999999999999998743

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.24  E-value=0.012  Score=44.42  Aligned_cols=97  Identities=12%  Similarity=0.169  Sum_probs=61.9

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EE-eCC----HHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TV-WGD----PAE  143 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v-~~D----~~~  143 (250)
                      .....+|+|+    | .|.+|...++.+...| .+|+++++++++.+..           ...+.. ++ ..|    .+.
T Consensus        27 ~~~g~tVlI~----G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-----------k~~GA~~~in~~~~~~~~~~   90 (176)
T d1d1ta2          27 VKPGSTCVVF----G-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-----------MAVGATECISPKDSTKPISE   90 (176)
T ss_dssp             CCTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHHTCSEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----C-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHH-----------HhcCCcEEECccccchHHHH
Confidence            3456789999    7 5999999999999999 5899999988765522           111222 11 111    344


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHh--CCCCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKS--SGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~--~~~~~~v~iSS  187 (250)
                      +.+...+..+|+||++.|..    ..+.+++..  .+-+++|+++-
T Consensus        91 ~~~~~~g~G~d~vi~~~g~~----~~~~~a~~~~~~~~G~~v~vG~  132 (176)
T d1d1ta2          91 VLSEMTGNNVGYTFEVIGHL----ETMIDALASCHMNYGTSVVVGV  132 (176)
T ss_dssp             HHHHHHTSCCCEEEECSCCH----HHHHHHHTTSCTTTCEEEECSC
T ss_pred             HHHHhccccceEEEEeCCch----HHHHHHHHHhhcCCeEEEEEEc
Confidence            55555566799999998832    122223222  23468888774

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.19  E-value=0.016  Score=43.78  Aligned_cols=98  Identities=14%  Similarity=0.168  Sum_probs=59.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC---C--HHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG---D--PAEV  144 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~---D--~~~l  144 (250)
                      ..+.+|+|+    | .|.||...++.+...|. +|++.++++++.+..           ...+.. ++..   |  .+.+
T Consensus        27 ~~G~~VlV~----G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-----------~~~Ga~~~i~~~~~~~~~~~~   90 (174)
T d1e3ia2          27 TPGSTCAVF----G-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-----------KALGATDCLNPRELDKPVQDV   90 (174)
T ss_dssp             CTTCEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEE----C-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH-----------HHhCCCcccCCccchhhhhhh
Confidence            456799999    7 59999999999999997 577777776554321           112222 2211   2  3444


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+...+..+|+||++.|..- .....++.++. +-++++.++-
T Consensus        91 ~~~~~~~G~d~vie~~G~~~-~~~~a~~~~~~-g~G~~v~vG~  131 (174)
T d1e3ia2          91 ITELTAGGVDYSLDCAGTAQ-TLKAAVDCTVL-GWGSCTVVGA  131 (174)
T ss_dssp             HHHHHTSCBSEEEESSCCHH-HHHHHHHTBCT-TTCEEEECCC
T ss_pred             HhhhhcCCCcEEEEecccch-HHHHHHHHhhc-CCeEEEecCC
Confidence            44455557999999998421 22222233322 3358888763

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.18  E-value=0.0013  Score=48.80  Aligned_cols=39  Identities=21%  Similarity=0.354  Sum_probs=33.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKM  118 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~  118 (250)
                      |+|.++    | .|-+|.++++.|++.| ++|++.+|+++..+.+
T Consensus         1 MkI~fI----G-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l   40 (152)
T d1yqga2           1 MNVYFL----G-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERL   40 (152)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHH
T ss_pred             CEEEEE----c-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHh
Confidence            689999    5 6999999999999887 9999999988665544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.18  E-value=0.0079  Score=45.46  Aligned_cols=99  Identities=12%  Similarity=0.088  Sum_probs=61.6

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEe----CC--HHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVW----GD--PAE  143 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~----~D--~~~  143 (250)
                      .....+|+|.    |+ |.+|...++.+...|. +|+++++++++.+..           ...+.+.+.    .|  .++
T Consensus        25 ~~~G~~VlV~----Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-----------~~lGa~~~i~~~~~d~~~~~   88 (174)
T d1p0fa2          25 VTPGSTCAVF----GL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-----------IELGATECLNPKDYDKPIYE   88 (174)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-----------HHTTCSEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----CC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-----------HHcCCcEEEcCCCchhHHHH
Confidence            4456799999    85 9999999999998885 688888887655432           122333221    12  344


Q ss_pred             HHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          144 VGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      ..+...+..+|+||++.|.. ......+..+++ +-.++++++-
T Consensus        89 ~~~~~~~~G~d~vid~~g~~-~~~~~~~~~~~~-~~G~~v~vG~  130 (174)
T d1p0fa2          89 VICEKTNGGVDYAVECAGRI-ETMMNALQSTYC-GSGVTVVLGL  130 (174)
T ss_dssp             HHHHHTTSCBSEEEECSCCH-HHHHHHHHTBCT-TTCEEEECCC
T ss_pred             HHHHhcCCCCcEEEEcCCCc-hHHHHHHHHHHH-hcCceEEEEE
Confidence            44555555699999998842 222233333322 3457887663

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.18  E-value=0.0047  Score=44.03  Aligned_cols=39  Identities=21%  Similarity=0.352  Sum_probs=33.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      ..+++++|+    | .|+||-.++..|.+.|.+|+++.|.+.-+
T Consensus        21 ~~p~~~vIi----G-~G~ig~E~A~~l~~lG~~Vtii~~~~~~l   59 (122)
T d1v59a2          21 EIPKRLTII----G-GGIIGLEMGSVYSRLGSKVTVVEFQPQIG   59 (122)
T ss_dssp             SCCSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred             cCCCeEEEE----C-CCchHHHHHHHHHhhCcceeEEEeccccc
Confidence            346899999    5 69999999999999999999999977443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.10  E-value=0.0014  Score=49.45  Aligned_cols=101  Identities=13%  Similarity=0.167  Sum_probs=60.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      ..||.|+    |+ |.+|..++..|+.+|  .++++++++++........ +..-.............|.+++    .+ 
T Consensus        19 ~~KI~II----Ga-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alD-l~~~~~~~~~~~~~~~~d~~~~----~~-   87 (159)
T d2ldxa1          19 RCKITVV----GV-GDVGMACAISILLKGLADELALVDADTDKLRGEALD-LQHGSLFLSTPKIVFGKDYNVS----AN-   87 (159)
T ss_dssp             CCEEEEE----CC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHH-HHHTTTTCSCCEEEEESSGGGG----TT-
T ss_pred             CCeEEEE----CC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHH-HhCcchhcCCCeEEeccchhhh----cc-
Confidence            3589999    85 999999999999997  4899999876443211000 0000000111222333455443    33 


Q ss_pred             cccEEEeCCC--------------cCHHhHHHHHHHHHhCCCCE-EEEEc
Q 025587          152 TFDVVLDNNG--------------KNLDAVRPVADWAKSSGVKQ-FLFIS  186 (250)
Q Consensus       152 ~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~~~~~-~v~iS  186 (250)
                       .|+||-++|              .|....+.+++.+++.+.+- ++.+|
T Consensus        88 -adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          88 -SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             -EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             -ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence             599999998              25666777777777655444 44444

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.07  E-value=0.012  Score=44.61  Aligned_cols=95  Identities=16%  Similarity=0.149  Sum_probs=54.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEc-CCCccccCCCCCCCcccchhcCCceEEeCC----------
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV-GDENSDKMKKPPFNRFNEIVSAGGKTVWGD----------  140 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R-~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D----------  140 (250)
                      |++||.|-     |-|.||+.+++.|+++. .+|+.+.- .++....          .+...+...+..+          
T Consensus         1 M~irIaIN-----GfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~----------~l~~~~~~~~~~~~~~~~~~~~~   65 (172)
T d2czca2           1 MKVKVGVN-----GYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAY----------RAKELGIPVYAASEEFIPRFEKE   65 (172)
T ss_dssp             CCEEEEEE-----CCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHH----------HHHHTTCCEEESSGGGHHHHHHH
T ss_pred             CcEEEEEE-----CCCHHHHHHHHHHHhCCCceEEEEecCCChHHHH----------HhhhcCceeecccccceeeeccc
Confidence            57899999     58999999999998864 67776653 2211100          0111122222222          


Q ss_pred             ----HHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          141 ----PAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       141 ----~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                          ...+.+++.+  +|+|++|.|...  +..-++.-.++|+ +.|++|.
T Consensus        66 ~~~~~~~~~~~~~~--vDvViEcTG~f~--~~~~~~~hl~~G~-k~Vi~s~  111 (172)
T d2czca2          66 GFEVAGTLNDLLEK--VDIIVDATPGGI--GAKNKPLYEKAGV-KAIFQGG  111 (172)
T ss_dssp             TCCCSCBHHHHHTT--CSEEEECCSTTH--HHHHHHHHHHHTC-EEEECTT
T ss_pred             Cccccchhhhhhcc--CCEEEECCCCCC--CHHHHHHHHHcCC-CEEEECC
Confidence                1123333334  899999999654  2222334445687 5566665

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.05  E-value=0.043  Score=39.85  Aligned_cols=84  Identities=23%  Similarity=0.169  Sum_probs=56.8

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      ..++|.|+    |++   +..|..+++.|.+.||+|+.+....+...                +..+ ..+   +.++-.
T Consensus        18 ~~ksIAVV----GaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~----------------G~~~-~~s---l~dlp~   73 (139)
T d2d59a1          18 RYKKIALV----GASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL----------------GRKC-YPS---VLDIPD   73 (139)
T ss_dssp             HCCEEEEE----TCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET----------------TEEC-BSS---GGGCSS
T ss_pred             cCCeEEEE----eecCCCCCchHHHHHHHHHCCCEEEEECCcccccC----------------CCcc-ccc---ccccCc
Confidence            46899999    987   78999999999999999988865432222                1111 112   222212


Q ss_pred             CCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          150 GVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       150 ~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                        .+|.|+-+.  ....+..+++.+.+.|++.+++
T Consensus        74 --~iD~v~i~v--p~~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          74 --KIEVVDLFV--KPKLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             --CCSEEEECS--CHHHHHHHHHHHHHHTCSEEEE
T ss_pred             --cceEEEEEe--CHHHHHHHHHHHHHhCCCEEEE
Confidence              268777664  3667778888888888876655

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.035  Score=43.89  Aligned_cols=111  Identities=16%  Similarity=0.205  Sum_probs=66.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccc--------------hhcCCceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNE--------------IVSAGGKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~--------------~~~~~v~~v  137 (250)
                      ...+|+|+    | .|.+|.++++.|+..|. +++++|.+.=...++..+......+              ...+++.+.
T Consensus        29 ~~~~Vlii----G-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~  103 (247)
T d1jw9b_          29 KDSRVLIV----G-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAIT  103 (247)
T ss_dssp             HHCEEEEE----C-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEE
T ss_pred             hCCCEEEE----C-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchh
Confidence            45799999    5 79999999999999995 7888876542223332221111111              112333333


Q ss_pred             eC----CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCccccc
Q 025587          138 WG----DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYK  192 (250)
Q Consensus       138 ~~----D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~  192 (250)
                      ..    +.+...+.+..  .|+|+++.. +...-..+-++|.+.++ .+|+-+..+.+|
T Consensus       104 ~~~~~~~~~~~~~~~~~--~divid~~d-~~~~~~~in~~~~~~~i-p~i~g~~~~~~g  158 (247)
T d1jw9b_         104 PVNALLDDAELAALIAE--HDLVLDCTD-NVAVRNQLNAGCFAAKV-PLVSGAAIRMEG  158 (247)
T ss_dssp             EECSCCCHHHHHHHHHT--SSEEEECCS-SHHHHHHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred             hhhhhhhhccccccccc--cceeeeccc-hhhhhhhHHHHHHHhCC-Cccccccccccc
Confidence            22    25555666665  699998874 34445555666777776 466655544444

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.95  E-value=0.016  Score=41.72  Aligned_cols=87  Identities=17%  Similarity=0.203  Sum_probs=60.6

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhh
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVV  148 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l  148 (250)
                      ..++|.|+    |++   +..|..+.+.|.+.| ++|+.+....+....                +.+    ..++.++-
T Consensus         7 ~PksIAVV----GaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G----------------~~~----y~sl~dlp   62 (129)
T d2csua1           7 NPKGIAVI----GASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQG----------------VKA----YKSVKDIP   62 (129)
T ss_dssp             SCSEEEEE----TCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETT----------------EEC----BSSTTSCS
T ss_pred             CCCeEEEE----ccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCC----------------eEe----ecchhhcC
Confidence            45899999    998   999999999998766 789988765433321                111    11122221


Q ss_pred             cCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          149 GGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       149 ~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                        ..+|.++-+..  ...+..+++.+.+.|++.++.+++
T Consensus        63 --~~vDlvvi~vp--~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          63 --DEIDLAIIVVP--KRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             --SCCSEEEECSC--HHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             --CCCceEEEecC--hHHhHHHHHHHHHcCCCEEEEecc
Confidence              13788886653  667778888888889998888876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.93  E-value=0.001  Score=50.70  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=35.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      ..+++|+|.    | +|..++.++..|.+.+.+|+++.|+.++.+.+
T Consensus        16 ~~~k~vlIl----G-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l   57 (171)
T d1p77a1          16 RPNQHVLIL----G-AGGATKGVLLPLLQAQQNIVLANRTFSKTKEL   57 (171)
T ss_dssp             CTTCEEEEE----C-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEE----C-CcHHHHHHHHHHcccCceeeeccchHHHHHHH
Confidence            356899999    5 68889999999999889999999998666544

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.021  Score=40.87  Aligned_cols=77  Identities=18%  Similarity=0.098  Sum_probs=55.1

Q ss_pred             ccCcEEEEEecCCCc----------chhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCH
Q 025587           72 AEKKKVLIVNTNSGG----------HAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDP  141 (250)
Q Consensus        72 ~~~~~VlVt~~~~Gg----------tG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~  141 (250)
                      ...|+|||+    |+          --+.+.+.++.|.+.||+++++..+++....-       ++  ....+=+...+.
T Consensus         5 ~~~kkvlil----GsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-------~d--~aD~lYfePlt~   71 (127)
T d1a9xa3           5 TDIKSILIL----GAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-------PE--MADATYIEPIHW   71 (127)
T ss_dssp             SSCCEEEEE----CCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-------GG--GSSEEECSCCCH
T ss_pred             CCCCEEEEE----CCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-------hh--hcceeeeecCCH
Confidence            345899999    76          45788999999999999999999888664310       00  001111112358


Q ss_pred             HHHHhhhcCCcccEEEeCCC
Q 025587          142 AEVGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~ag  161 (250)
                      +.+.++++..++|.|+-..|
T Consensus        72 e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          72 EVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHhCcCCeEEEee
Confidence            99999998888999997766

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.87  E-value=0.015  Score=43.32  Aligned_cols=100  Identities=18%  Similarity=0.201  Sum_probs=56.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh-C-CCeEEEEE-cCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-S-GHEVTIMT-VGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~-G~~V~~l~-R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      +.||-|+    | +|.+|..+..++++ . ..+++++. |+.+....         ......++.+...+.+++.+..+.
T Consensus         4 kirvaII----G-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~---------~~a~~~~i~~~~~~~d~l~~~~~~   69 (157)
T d1nvmb1           4 KLKVAII----G-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGL---------ARAQRMGVTTTYAGVEGLIKLPEF   69 (157)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHH---------HHHHHTTCCEESSHHHHHHHSGGG
T ss_pred             CcEEEEE----c-CcHHHHHHHHHHHhhCCcceEEEEEecchhccch---------hhhhhcCCcccccceeeeeecccc
Confidence            4689999    8 99999875544444 3 46777764 55432210         001223455444446666665544


Q ss_pred             CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          151 VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       151 ~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      .++|+|+.+...........+..+.+.|. ++|-.|+.
T Consensus        70 ~~iDiVf~ATpag~h~~~~~~~~aa~~G~-~VID~s~a  106 (157)
T d1nvmb1          70 ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPA  106 (157)
T ss_dssp             GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTT
T ss_pred             cccCEEEEcCCchhHHHhHHHHHHHHcCC-EEEEcccc
Confidence            45899998754333333333333345565 67777763

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.86  E-value=0.012  Score=42.06  Aligned_cols=95  Identities=21%  Similarity=0.124  Sum_probs=64.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      +.+|+|.     |+|.+|+++++++.. .||+++++.-.......           ..-.++.+.  +.+++.+.... .
T Consensus         3 ~~~v~I~-----GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G-----------~~I~Gi~V~--~~~~l~~~~~~-~   63 (126)
T d2dt5a2           3 KWGLCIV-----GMGRLGSALADYPGFGESFELRGFFDVDPEKVG-----------RPVRGGVIE--HVDLLPQRVPG-R   63 (126)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT-----------CEETTEEEE--EGGGHHHHSTT-T
T ss_pred             CceEEEE-----cCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC-----------CEECCEEEe--cHHHHHHHHhh-c
Confidence            3589999     579999999998753 47898887654322111           122355554  45667777765 3


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      ++.++-+..  ....+.+++.+.+.|++.+..++...
T Consensus        64 i~iai~~i~--~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          64 IEIALLTVP--REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             CCEEEECSC--HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             ccEEEEeCC--HHHHHHHHHHHHHcCCCEEeecCcee
Confidence            666665543  45677899999999999888776544

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.85  E-value=0.0093  Score=42.10  Aligned_cols=36  Identities=28%  Similarity=0.324  Sum_probs=32.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      +++|+|+    | .|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        22 p~~v~Ii----G-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          22 SKKIGIV----G-SGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CSEEEEE----C-CSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCEEEEE----C-CchHHHHHHHHHHhccccceeeehhccc
Confidence            5899999    5 6999999999999999999999998643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.83  E-value=0.019  Score=40.77  Aligned_cols=83  Identities=18%  Similarity=0.230  Sum_probs=55.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC---HHHHHhhhcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD---PAEVGNVVGGV  151 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D---~~~l~~~l~~~  151 (250)
                      |.|+|.    | .|-+|+.++++|  +|++|++++.+++..+.           ....++.++.||   ++.|.++ .-.
T Consensus         1 kHivI~----G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~-----------~~~~~~~~i~Gd~~~~~~L~~a-~i~   61 (129)
T d2fy8a1           1 RHVVIC----G-WSESTLECLREL--RGSEVFVLAEDENVRKK-----------VLRSGANFVHGDPTRVSDLEKA-NVR   61 (129)
T ss_dssp             CCEEEE----S-CCHHHHHHHHTS--CGGGEEEEESCTTHHHH-----------HHHTTCEEEESCTTSHHHHHHT-TCT
T ss_pred             CEEEEE----C-CCHHHHHHHHHH--cCCCCEEEEcchHHHHH-----------HHhcCccccccccCCHHHHHHh-hhh
Confidence            468888    5 689999999998  47788888887755442           345578899998   5555554 223


Q ss_pred             cccEEEeCCCcCHHhHHHHHHHHHhC
Q 025587          152 TFDVVLDNNGKNLDAVRPVADWAKSS  177 (250)
Q Consensus       152 ~~d~Vi~~ag~~~~~~~~ll~~~~~~  177 (250)
                      +.+.++-+..-+ .....++..+++.
T Consensus        62 ~A~~vi~~~~~d-~~n~~~~~~~r~~   86 (129)
T d2fy8a1          62 GARAVIVNLESD-SETIHCILGIRKI   86 (129)
T ss_dssp             TCSEEEECCSSH-HHHHHHHHHHHHH
T ss_pred             cCcEEEEeccch-hhhHHHHHHHHHH
Confidence            478888776533 3334445556663

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.78  E-value=0.03  Score=41.26  Aligned_cols=94  Identities=17%  Similarity=0.187  Sum_probs=56.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC----C-HHHHHh
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D-PAEVGN  146 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~----D-~~~l~~  146 (250)
                      ..+.+|+|.    |+ |.+|...++.+...|++|+++++++++.+..           ...+...+..    | .+.+.+
T Consensus        26 ~~g~~vlv~----G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-----------k~~Ga~~~~~~~~~~~~~~~~~   89 (168)
T d1rjwa2          26 KPGEWVAIY----GI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-----------KELGADLVVNPLKEDAAKFMKE   89 (168)
T ss_dssp             CTTCEEEEE----CC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCSEEECTTTSCHHHHHHH
T ss_pred             CCCCEEEEe----ec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-----------hhcCcceecccccchhhhhccc
Confidence            346789999    75 8999999999999999999999887655432           2223333332    2 333444


Q ss_pred             hhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          147 VVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       147 ~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      .-.+  .+.+|.+++. .......++.++..  .+++.++
T Consensus        90 ~~~~--~~~~v~~~~~-~~~~~~a~~~l~~~--G~i~~~g  124 (168)
T d1rjwa2          90 KVGG--VHAAVVTAVS-KPAFQSAYNSIRRG--GACVLVG  124 (168)
T ss_dssp             HHSS--EEEEEESSCC-HHHHHHHHHHEEEE--EEEEECC
T ss_pred             ccCC--CceEEeecCC-HHHHHHHHHHhccC--CceEecc
Confidence            4444  4556666652 33444455555442  2455543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.74  E-value=0.0032  Score=46.88  Aligned_cols=102  Identities=9%  Similarity=0.041  Sum_probs=55.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC----e---EEEEEcC--CCccccCCCCCCCcccchhcCCceEEeCCHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH----E---VTIMTVG--DENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEV  144 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~----~---V~~l~R~--~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l  144 (250)
                      ++||.|+    ||+|++|+.++..|+..+.    .   ..++.-.  .+..+...    ..+..........+.. ..+.
T Consensus         4 p~KV~Ii----GA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~   74 (154)
T d1y7ta1           4 PVRVAVT----GAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVV----MELEDCAFPLLAGLEA-TDDP   74 (154)
T ss_dssp             CEEEEES----STTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH----HHHHTTTCTTEEEEEE-ESCH
T ss_pred             CCEEEEE----CCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCch----hhhhcccccccccccc-CCch
Confidence            5699999    9999999999999987652    1   1222111  11111000    0000001111221111 2223


Q ss_pred             HhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhC-CC-CEEEEEc
Q 025587          145 GNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSS-GV-KQFLFIS  186 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~-~~-~~~v~iS  186 (250)
                      .+.+++  .|+||-++|              .|....+.+.+.+.+. .. ..++.+|
T Consensus        75 ~~~~~~--advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          75 KVAFKD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhccc--ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            455666  599999998              2566788888887773 32 2454555

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.71  E-value=0.0051  Score=46.44  Aligned_cols=97  Identities=10%  Similarity=0.211  Sum_probs=57.1

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEE-EEcCCCccccCCCCCCCcccchhcCCc-eEEeCC----HHHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTI-MTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD----PAEV  144 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~-l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D----~~~l  144 (250)
                      .....+|+|.    |+ |.+|...++.+...|+++++ .++++++.+..           ...+. +++..+    .+.+
T Consensus        26 ~~~g~~VlI~----G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-----------~~~Ga~~~i~~~~~~~~~~i   89 (174)
T d1f8fa2          26 VTPASSFVTW----GA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-----------KQLGATHVINSKTQDPVAAI   89 (174)
T ss_dssp             CCTTCEEEEE----SC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-----------HHHTCSEEEETTTSCHHHHH
T ss_pred             CCCCCEEEEe----CC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-----------HHcCCeEEEeCCCcCHHHHH
Confidence            3456789999    86 99999999988888876554 55555443321           11122 233222    3334


Q ss_pred             HhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          145 GNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .+.-.+ .+|+||++.|.. ......++.++.  -+++++++.
T Consensus        90 ~~~t~g-g~D~vid~~G~~-~~~~~~~~~~~~--~G~i~~~G~  128 (174)
T d1f8fa2          90 KEITDG-GVNFALESTGSP-EILKQGVDALGI--LGKIAVVGA  128 (174)
T ss_dssp             HHHTTS-CEEEEEECSCCH-HHHHHHHHTEEE--EEEEEECCC
T ss_pred             HHHcCC-CCcEEEEcCCcH-HHHHHHHhcccC--ceEEEEEee
Confidence            444333 699999999842 222333444443  347887664

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.68  E-value=0.018  Score=42.49  Aligned_cols=101  Identities=18%  Similarity=0.161  Sum_probs=61.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC---CCCCcccchhcCCceEEe-CCHHHHHhh----
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK---PPFNRFNEIVSAGGKTVW-GDPAEVGNV----  147 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~---~~~~~~~~~~~~~v~~v~-~D~~~l~~~----  147 (250)
                      ||-++     |.|.+|..+++.|++.||.| +..|..++...+.+   ............++.+.. .+.+.+...    
T Consensus         2 kIg~I-----GlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l   75 (156)
T d2cvza2           2 KVAFI-----GLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEAL   75 (156)
T ss_dssp             CEEEE-----CCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred             eEEEE-----eHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccc
Confidence            68889     58999999999999999876 46666543322110   000111122223333222 233333322    


Q ss_pred             hcC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEE
Q 025587          148 VGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFL  183 (250)
Q Consensus       148 l~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v  183 (250)
                      +.. .+-..++++...+...++.+.+.+++.|+ +||
T Consensus        76 ~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi-~~l  111 (156)
T d2cvza2          76 YPYLREGTYWVDATSGEPEASRRLAERLREKGV-TYL  111 (156)
T ss_dssp             TTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTE-EEE
T ss_pred             cccccccccccccccCCHHHHHHHHHHHHHcCC-eEE
Confidence            222 23568889999999999999999998765 444

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.68  E-value=0.016  Score=40.82  Aligned_cols=38  Identities=29%  Similarity=0.358  Sum_probs=33.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      ..+++++|+    | .|+||-.++..|.+.|.+|+++.|.+.-
T Consensus        20 ~~p~~i~Ii----G-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          20 NVPGKLGVI----G-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             SCCSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             cCCCeEEEE----C-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            345899999    5 6999999999999999999999988643

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.66  E-value=0.014  Score=44.39  Aligned_cols=97  Identities=14%  Similarity=0.157  Sum_probs=53.1

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      |++|-|+    ||||++|..+++.|.+.- .++..+..+...-+.+..    .++.+. ....+...|.+++.+   +  
T Consensus         1 MikVaIv----GATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~----~~p~~~-~~~~~~~~~~~~~~~---~--   66 (176)
T d1vkna1           1 MIRAGII----GATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEE----IFPSTL-ENSILSEFDPEKVSK---N--   66 (176)
T ss_dssp             CEEEEEE----STTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHH----HCGGGC-CCCBCBCCCHHHHHH---H--
T ss_pred             CeEEEEE----CCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccc----cCchhh-ccccccccCHhHhcc---c--
Confidence            4789999    999999999999998864 667766543321111100    000010 111122234444332   3  


Q ss_pred             ccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcc
Q 025587          153 FDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAG  189 (250)
Q Consensus       153 ~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~  189 (250)
                      +|+|+.+.+..+.  ..++..  ..+ .++|=+|+..
T Consensus        67 ~dvvf~a~p~~~s--~~~~~~--~~~-~~VIDlSadf   98 (176)
T d1vkna1          67 CDVLFTALPAGAS--YDLVRE--LKG-VKIIDLGADF   98 (176)
T ss_dssp             CSEEEECCSTTHH--HHHHTT--CCS-CEEEESSSTT
T ss_pred             cceEEEccccHHH--HHHHHh--hcc-ceEEecCccc
Confidence            6999988875442  222221  233 4777777743

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.59  E-value=0.0029  Score=48.73  Aligned_cols=39  Identities=28%  Similarity=0.422  Sum_probs=31.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK  119 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~  119 (250)
                      |+|.|+    | .|++|..++..| ++||+|++++-+++..+.+.
T Consensus         1 MkI~Vi----G-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVA----G-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEE----C-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            689999    5 899999998755 67999999998876655443

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.59  E-value=0.0036  Score=46.38  Aligned_cols=38  Identities=26%  Similarity=0.262  Sum_probs=33.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      |||.++     |+|-+|+++++.|++.|++|++.+|+.++.++
T Consensus         1 MkIg~I-----G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~   38 (152)
T d2ahra2           1 MKIGII-----GVGKMASAIIKGLKQTPHELIISGSSLERSKE   38 (152)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHH
T ss_pred             CEEEEE-----eccHHHHHHHHHHHhCCCeEEEEcChHHhHHh
Confidence            579999     58999999999999999999999998765554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.57  E-value=0.0095  Score=42.30  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=33.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      ..++|+|+    | .|++|-.++..|.++|.+|+++.+.+.-.
T Consensus        29 ~~~~vvII----G-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          29 PQSRLLIV----G-GGVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             TTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             cCCeEEEE----C-cchhHHHHHHHhhcccceEEEEeeccccc
Confidence            35799999    5 69999999999999999999999987543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.011  Score=41.60  Aligned_cols=36  Identities=25%  Similarity=0.392  Sum_probs=32.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      +++|+|+    | .|++|-.++..|.+.|++|+++.|.+.-
T Consensus        21 p~~vvIi----G-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVV----G-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEE----C-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            5799999    5 6999999999999999999999998743

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.44  E-value=0.026  Score=43.34  Aligned_cols=75  Identities=15%  Similarity=0.161  Sum_probs=51.4

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCceEEeC----C-HHHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWG----D-PAEV  144 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~----D-~~~l  144 (250)
                      ...+.+|||.    |+ |.+|...+..+...|. +|+++++++++.+..           ...+...+..    | .+.+
T Consensus        23 v~~G~tVlV~----Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-----------~~~Ga~~~~~~~~~~~~~~i   86 (195)
T d1kola2          23 VGPGSTVYVA----GA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-----------KAQGFEIADLSLDTPLHEQI   86 (195)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-----------HHTTCEEEETTSSSCHHHHH
T ss_pred             CCCCCEEEEE----Cc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-----------hhccccEEEeCCCcCHHHHH
Confidence            3456799999    75 9999888888877775 788888877554421           2223343321    2 4556


Q ss_pred             HhhhcCCcccEEEeCCC
Q 025587          145 GNVVGGVTFDVVLDNNG  161 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag  161 (250)
                      .++..+..+|++|++.|
T Consensus        87 ~~~t~g~g~D~vid~vG  103 (195)
T d1kola2          87 AALLGEPEVDCAVDAVG  103 (195)
T ss_dssp             HHHHSSSCEEEEEECCC
T ss_pred             HHHhCCCCcEEEEECcc
Confidence            66666667999999988

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.40  E-value=0.0091  Score=46.60  Aligned_cols=34  Identities=32%  Similarity=0.443  Sum_probs=30.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .++|+|+    | .|..|...+.+|.++|++|+++.|..
T Consensus         6 ~~kVvVI----G-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVL----G-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEE----C-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4689999    5 69999999999999999999999864

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.39  E-value=0.012  Score=41.88  Aligned_cols=36  Identities=28%  Similarity=0.524  Sum_probs=32.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ..++|+|+    | .|++|..++..|.+.|++|+++.+.+.
T Consensus        29 ~~k~vvVi----G-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVI----G-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEE----C-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            45799999    5 699999999999999999999998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.36  E-value=0.011  Score=44.35  Aligned_cols=95  Identities=18%  Similarity=0.170  Sum_probs=57.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCc-eEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGG-KTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v-~~v~~D---~~~l~~~  147 (250)
                      ...+|+|.    |+ |.+|...++.+...|. .|+++++++++.+..+           ..+. +++..+   .+.+.+.
T Consensus        32 ~g~~vli~----Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-----------~~ga~~~i~~~~~~~~~~~~~   95 (172)
T d1h2ba2          32 PGAYVAIV----GV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-----------RLGADHVVDARRDPVKQVMEL   95 (172)
T ss_dssp             TTCEEEEE----CC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-----------HTTCSEEEETTSCHHHHHHHH
T ss_pred             CCCEEEEe----CC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-----------hcccceeecCcccHHHHHHHh
Confidence            35789999    75 9999999998887774 6666777765444221           1122 233333   3444444


Q ss_pred             hcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEc
Q 025587          148 VGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFIS  186 (250)
Q Consensus       148 l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iS  186 (250)
                      ..+..+|+||++.|... .....++.++.  -++++.++
T Consensus        96 ~~~~g~d~vid~~g~~~-~~~~a~~~l~~--~G~iv~~G  131 (172)
T d1h2ba2          96 TRGRGVNVAMDFVGSQA-TVDYTPYLLGR--MGRLIIVG  131 (172)
T ss_dssp             TTTCCEEEEEESSCCHH-HHHHGGGGEEE--EEEEEECC
T ss_pred             hCCCCceEEEEecCcch-HHHHHHHHHhC--CCEEEEEe
Confidence            45556999999998431 22223333333  25788765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.35  E-value=0.033  Score=42.91  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=33.1

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      .-.+++|.|+     |.|.||+.+++.|..-|.+|++.++..+
T Consensus        40 el~gk~vgIi-----G~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVV-----GTGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEe-----cccccchhHHHhHhhhcccccccCcccc
Confidence            3457899999     6999999999999999999999987653

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=95.30  E-value=0.01  Score=45.04  Aligned_cols=101  Identities=10%  Similarity=0.057  Sum_probs=57.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-----C--eEEEEEcCCC--ccccCCCCCCCcccchhcCCce-EEeCCHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-----H--EVTIMTVGDE--NSDKMKKPPFNRFNEIVSAGGK-TVWGDPAE  143 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-----~--~V~~l~R~~~--~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~  143 (250)
                      ..+|.|+    ||+|.||..++..|+..+     .  ++++++....  ..+.+.-    .+.+....... .+.+  .+
T Consensus        24 ~~kV~I~----GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~m----dl~d~a~~~~~~~~~~--~~   93 (175)
T d7mdha1          24 LVNIAVS----GAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAM----ELEDSLYPLLREVSIG--ID   93 (175)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHH----HHHTTTCTTEEEEEEE--SC
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhh----hhcccccccccCcccc--cc
Confidence            3589999    999999999999998742     1  4444554331  1111000    00000111111 2222  23


Q ss_pred             HHhhhcCCcccEEEeCCC--------------cCHHhHHHHHHHHHhC-C-CCEEEEEc
Q 025587          144 VGNVVGGVTFDVVLDNNG--------------KNLDAVRPVADWAKSS-G-VKQFLFIS  186 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag--------------~~~~~~~~ll~~~~~~-~-~~~~v~iS  186 (250)
                      ..+.+++  .|+||-.+|              .|....+.+.+++.+. . -.+++.++
T Consensus        94 ~~~~~~~--aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          94 PYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             chhhccC--CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            4455666  599999998              3566688888888874 3 23455554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.30  E-value=0.038  Score=36.95  Aligned_cols=84  Identities=17%  Similarity=0.147  Sum_probs=55.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCC-HHHHHhhhcCCcc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGD-PAEVGNVVGGVTF  153 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D-~~~l~~~l~~~~~  153 (250)
                      |||.++  |-||+|.-|  |++.|+++||+|.+-|+......          ..+...++++..+. ++.+    .+  .
T Consensus         2 ~~ihfi--GIgG~GMs~--LA~~L~~~G~~VsGSD~~~~~~t----------~~L~~~Gi~i~~gh~~~~i----~~--~   61 (89)
T d1j6ua1           2 MKIHFV--GIGGIGMSA--VALHEFSNGNDVYGSNIEETERT----------AYLRKLGIPIFVPHSADNW----YD--P   61 (89)
T ss_dssp             CEEEEE--TTTSHHHHH--HHHHHHHTTCEEEEECSSCCHHH----------HHHHHTTCCEESSCCTTSC----CC--C
T ss_pred             cEEEEE--eECHHHHHH--HHHHHHhCCCeEEEEeCCCChhH----------HHHHHCCCeEEeeeccccc----CC--C
Confidence            577777  445555555  78999999999999998753222          23556677766553 4443    33  6


Q ss_pred             cEEEeCCCcCHHhHHHHHHHHHhCCCC
Q 025587          154 DVVLDNNGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       154 d~Vi~~ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      |.||...++.-+  ..-+.+|++.|++
T Consensus        62 d~vV~SsAI~~~--npel~~A~~~gIp   86 (89)
T d1j6ua1          62 DLVIKTPAVRDD--NPEIVRARMERVP   86 (89)
T ss_dssp             SEEEECTTCCTT--CHHHHHHHHTTCC
T ss_pred             CEEEEecCcCCC--CHHHHHHHHcCCC
Confidence            999988875322  2346777887774

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.29  E-value=0.0099  Score=42.25  Aligned_cols=39  Identities=26%  Similarity=0.369  Sum_probs=34.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      ..+++++|+    | .|+||-.++..|.+.|.+|+++.|++...
T Consensus        23 ~~p~~~vii----G-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          23 EIPKKLVVI----G-AGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             SCCSEEEES----C-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             ccCCeEEEE----c-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            346899999    5 69999999999999999999999987544

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.015  Score=41.34  Aligned_cols=36  Identities=25%  Similarity=0.315  Sum_probs=32.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      +++|+|+    | .|+||-.++..|.+.|.+|+++.|++.-
T Consensus        22 pk~vvIv----G-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIV----G-AGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEE----c-CCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            4799999    5 6999999999999999999999998743

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.21  E-value=0.013  Score=41.05  Aligned_cols=38  Identities=21%  Similarity=0.344  Sum_probs=33.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      ..+++++|+    | .|++|-.++..|.+.|++|+++.|.+.-
T Consensus        19 ~~p~~vvIi----G-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          19 ALPQHLVVV----G-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             SCCSEEEEE----C-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             cCCCeEEEE----C-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            345899999    5 6999999999999999999999987643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.20  E-value=0.031  Score=42.40  Aligned_cols=32  Identities=16%  Similarity=0.176  Sum_probs=26.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV  110 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R  110 (250)
                      |.||-|.    | .|.||+.+++.|.+++ .+|+++..
T Consensus         1 MIKVaIN----G-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVN----G-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEE----C-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            3589999    5 8999999999999874 78888754

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.15  E-value=0.024  Score=41.93  Aligned_cols=41  Identities=20%  Similarity=0.200  Sum_probs=34.3

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSD  116 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~  116 (250)
                      .....+|+|.    |+ |.+|...++.+...|++|+++++++++.+
T Consensus        25 ~~~g~~VlV~----Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~   65 (166)
T d1llua2          25 ARPGQWVAIS----GI-GGLGHVAVQYARAMGLHVAAIDIDDAKLE   65 (166)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCCCEEEEe----ec-cccHHHHHHHHHHcCCccceecchhhHHH
Confidence            3446799999    86 99999999988888999999999876554

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.11  E-value=0.1  Score=39.35  Aligned_cols=37  Identities=24%  Similarity=0.289  Sum_probs=33.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      -.+++|.|+     |.|.||+.+++.|..-|.+|++.+|...
T Consensus        40 l~gk~vgIi-----G~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVL-----GLGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEE-----SCSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEe-----ccccccccceeeeecccccccccccccc
Confidence            457899999     5899999999999999999999998763

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.05  E-value=0.012  Score=41.62  Aligned_cols=34  Identities=29%  Similarity=0.518  Sum_probs=30.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .++|+|+    | .|++|-.++..|.+.|++|+++.|.+
T Consensus        32 ~~~vvIi----G-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIII----G-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEE----E-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEE----C-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            4789999    5 69999999999999999999998875

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.01  E-value=0.014  Score=41.44  Aligned_cols=35  Identities=31%  Similarity=0.364  Sum_probs=31.0

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      ..+++++|+    | .|+||-.++..|.+.|.+|+++.|+
T Consensus        18 ~~P~~vvII----G-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVV----G-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEE----C-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             cCCCeEEEE----C-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            345789999    5 6999999999999999999999875

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.98  E-value=0.0057  Score=45.43  Aligned_cols=26  Identities=23%  Similarity=0.355  Sum_probs=22.8

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG  102 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G  102 (250)
                      +++||.|+    ||+|.+|.+++..|+..+
T Consensus         2 ~p~KV~Ii----GA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           2 EPIRVLVT----GAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             CCEEEEES----STTSHHHHTTHHHHHTTT
T ss_pred             CceEEEEE----CCCCHHHHHHHHHHHHHH
Confidence            45799999    999999999999998653

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.91  E-value=0.084  Score=39.60  Aligned_cols=32  Identities=22%  Similarity=0.211  Sum_probs=25.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV  110 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R  110 (250)
                      |++|-|-     |-|.||+.+++.|++++ .+|+.+.-
T Consensus         1 M~~VgIN-----GfGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAIN-----GYGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEE-----CCSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEE-----cCcHHHHHHHHHHHhCCCceEEEEec
Confidence            4688898     58999999999998876 67776653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.87  E-value=0.017  Score=41.56  Aligned_cols=37  Identities=16%  Similarity=0.389  Sum_probs=32.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      ..++|+|+    | .|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        34 ~~k~v~VI----G-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVI----G-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEE----C-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            35899999    5 6999999999999999999999998743

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.81  E-value=0.021  Score=43.47  Aligned_cols=38  Identities=32%  Similarity=0.502  Sum_probs=33.6

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ...+|+|+|+    | .|..|...+..|.++||+|+++.+.++
T Consensus        40 ~~~~k~V~II----G-aGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          40 AVQKKNLAVV----G-AGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CSSCCEEEEE----C-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCcEEEEE----C-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence            4457899999    5 699999999999999999999998763

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=94.79  E-value=0.019  Score=42.79  Aligned_cols=75  Identities=11%  Similarity=0.067  Sum_probs=45.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeC-----CHHHH
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWG-----DPAEV  144 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~-----D~~~l  144 (250)
                      ....+|+|.    |+ |.+|...++.+...|. .|++.++++++.+..           ...+.. ++..     +.+..
T Consensus        27 ~~G~tVlI~----Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-----------k~lGa~~~i~~~~~~~~~~~~   90 (176)
T d2fzwa2          27 EPGSVCAVF----GL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-----------KEFGATECINPQDFSKPIQEV   90 (176)
T ss_dssp             CTTCEEEEE----CC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-----------HHHTCSEEECGGGCSSCHHHH
T ss_pred             CCCCEEEEe----cc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-----------HHhCCcEEEeCCchhhHHHHH
Confidence            346789999    87 5789999999988896 465566655444321           111222 2211     12233


Q ss_pred             HhhhcCCcccEEEeCCCc
Q 025587          145 GNVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       145 ~~~l~~~~~d~Vi~~ag~  162 (250)
                      .+...+..+|+||++.|.
T Consensus        91 ~~~~~~~g~D~vid~~G~  108 (176)
T d2fzwa2          91 LIEMTDGGVDYSFECIGN  108 (176)
T ss_dssp             HHHHTTSCBSEEEECSCC
T ss_pred             HHHHcCCCCcEeeecCCC
Confidence            333344569999999883

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.74  E-value=0.028  Score=39.98  Aligned_cols=40  Identities=20%  Similarity=0.316  Sum_probs=34.0

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS  115 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~  115 (250)
                      ...+++++|+    | .|+||-.++..|.+.|.+|+++.+.+.-.
T Consensus        23 ~~~p~~vvIi----G-gG~IG~E~A~~~~~~G~~Vtive~~~~il   62 (125)
T d1ojta2          23 KEVPGKLLII----G-GGIIGLEMGTVYSTLGSRLDVVEMMDGLM   62 (125)
T ss_dssp             CCCCSEEEEE----S-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             cccCCeEEEE----C-CCHHHHHHHHHhhcCCCEEEEEEeecccc
Confidence            3446899999    5 69999999999999999999999976433

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.71  E-value=0.077  Score=40.74  Aligned_cols=38  Identities=21%  Similarity=0.168  Sum_probs=33.2

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      .-.+++|.|+     |.|.||+.+++.|..-|.+|++.++...
T Consensus        42 ~l~~ktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVM-----GTGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeee-----ecccccccccccccccceeeeccCCccc
Confidence            4456899999     6899999999999999999999998653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.68  E-value=0.096  Score=39.72  Aligned_cols=37  Identities=27%  Similarity=0.231  Sum_probs=32.7

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ....++|.|+     |.|.||+.+++.|..-|.+|+..++..
T Consensus        41 ~l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          41 EARGKKLGII-----GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CSTTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccceEEEEe-----ecccchhhhhhhcccccceEeeccccc
Confidence            3457899999     689999999999999999999999765

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=94.54  E-value=0.019  Score=43.77  Aligned_cols=35  Identities=17%  Similarity=0.364  Sum_probs=28.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV  110 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R  110 (250)
                      .++.||-|+    ||||++|..+++.|.+.- .++..+..
T Consensus         3 ~~kikVaIl----GATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           3 GEEVRIAVL----GASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SSCEEEEEE----SCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CCccEEEEE----CcccHHHHHHHHHHHhCCCceEEEEec
Confidence            356799999    999999999999998874 67766653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.51  E-value=0.084  Score=39.07  Aligned_cols=76  Identities=14%  Similarity=0.177  Sum_probs=48.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEe-CC----HHH
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVW-GD----PAE  143 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~-~D----~~~  143 (250)
                      .....+|+|+    |+ |.+|...+..+...| .+|+++++.+++.+..           ...+.. ++. .+    .+.
T Consensus        26 ~k~g~~VlI~----G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-----------~~~GAd~~in~~~~~~~~~~   89 (175)
T d1cdoa2          26 VEPGSTCAVF----GL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-----------KVFGATDFVNPNDHSEPISQ   89 (175)
T ss_dssp             CCTTCEEEEE----CC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-----------HHTTCCEEECGGGCSSCHHH
T ss_pred             CCCCCEEEEE----ec-CCccchHHHHHHHHhhchheeecchHHHHHHH-----------HHcCCcEEEcCCCcchhHHH
Confidence            3456789999    76 557777777777776 5788888887655432           222332 221 11    345


Q ss_pred             HHhhhcCCcccEEEeCCCc
Q 025587          144 VGNVVGGVTFDVVLDNNGK  162 (250)
Q Consensus       144 l~~~l~~~~~d~Vi~~ag~  162 (250)
                      +.+...+..+|+|+++.|.
T Consensus        90 ~~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          90 VLSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             HHHHHHTSCBSEEEECSCC
T ss_pred             HHHhhccCCcceeeeecCC
Confidence            5555555569999999984

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.36  E-value=0.018  Score=46.24  Aligned_cols=37  Identities=35%  Similarity=0.623  Sum_probs=32.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ...+|+|+|+    | .|..|...+.+|.++|++|+++.+.+
T Consensus        27 ~~~pkkV~II----G-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIV----G-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEE----C-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4456899999    5 69999999999999999999998765

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.34  E-value=0.03  Score=43.90  Aligned_cols=35  Identities=20%  Similarity=0.373  Sum_probs=31.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      .+||+|+    | .|..|..++..|.++|++|+++.|.++
T Consensus         4 ~~kV~Ii----G-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVV----G-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEE----C-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4789999    5 699999999999999999999998764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.062  Score=47.60  Aligned_cols=111  Identities=19%  Similarity=0.242  Sum_probs=70.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCCCCCC------Cc---------ccchhcCC--c
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMKKPPF------NR---------FNEIVSAG--G  134 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~------~~---------~~~~~~~~--v  134 (250)
                      +..+|+|+    |+ |.+|..+++-|+..| -++++++.+.=...++..+-+      .+         +.+ ..++  +
T Consensus        24 ~~s~Vlvv----G~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~-lNp~v~i   97 (529)
T d1yova1          24 ESAHVCLI----NA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQE-LNSDVSG   97 (529)
T ss_dssp             HHCEEEEC----CC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHT-TCTTSBC
T ss_pred             hCCCEEEE----CC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHH-hCCCCcE
Confidence            34699999    65 789999999999999 578888754311111111000      00         111 1222  4


Q ss_pred             eEEeCCHHHHH----hhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEEcCcccccC
Q 025587          135 KTVWGDPAEVG----NVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFISSAGIYKP  193 (250)
Q Consensus       135 ~~v~~D~~~l~----~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS~~vy~~  193 (250)
                      ..+..+++++.    +.+.+  +|+||.+.. +......+-+.|++.++ .||...+.|.||.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~--~dvVv~~~~-~~~~~~~l~~~c~~~~i-p~i~~~~~G~~G~  156 (529)
T d1yova1          98 SFVEESPENLLDNDPSFFCR--FTVVVATQL-PESTSLRLADVLWNSQI-PLLICRTYGLVGY  156 (529)
T ss_dssp             CEESSCHHHHHHSCGGGGGG--CSEEEEESC-CHHHHHHHHHHHHHHTC-CEEEEEEETTEEE
T ss_pred             EEEcCCchhhhhhHHHHhcC--CCEEEECCC-CHHHHHHHHHHHHHcCC-CEEEEeccCCEEE
Confidence            45555555543    23344  799997754 56667778888988887 5888888888774

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.31  E-value=0.02  Score=43.05  Aligned_cols=36  Identities=19%  Similarity=0.207  Sum_probs=31.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDE  113 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~  113 (250)
                      .++||+|+    | .|..|...+..|.++|+ +|+++.|.+.
T Consensus         3 ~~~kVaII----G-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALL----G-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEE----C-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEE----C-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            35899999    5 69999999999999998 5999998763

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.26  E-value=0.025  Score=46.59  Aligned_cols=35  Identities=37%  Similarity=0.628  Sum_probs=31.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ++|+|+|+     |+|.-|...|.+|.++|++|.++.+++
T Consensus         1 k~KKI~II-----GaG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIV-----GAGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEE-----CCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            36899999     479999999999999999999998765

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.24  E-value=0.023  Score=44.63  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=30.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .|||+|+    | .|.-|...+.+|.++|++|+++.+++
T Consensus         1 ~KkV~II----G-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVI----G-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEE----C-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3789999    5 69999999999999999999998754

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.20  E-value=0.059  Score=40.46  Aligned_cols=91  Identities=11%  Similarity=0.149  Sum_probs=53.4

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGV  151 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~  151 (250)
                      +.||.|+    | +|.+|+..++.|... +.+|+++ +++.+..+.+.+.       ........+..|   ++++++..
T Consensus         1 kiki~iI----G-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~ll~~~   65 (184)
T d1ydwa1           1 QIRIGVM----G-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA-------NNYPESTKIHGS---YESLLEDP   65 (184)
T ss_dssp             CEEEEEE----S-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH-------TTCCTTCEEESS---HHHHHHCT
T ss_pred             CeEEEEE----c-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc-------cccccceeecCc---HHHhhhcc
Confidence            3589999    6 799999999988775 6788765 5555443322110       000001112223   44444444


Q ss_pred             cccEEEeCCC-------------------------cCHHhHHHHHHHHHhCCC
Q 025587          152 TFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGV  179 (250)
Q Consensus       152 ~~d~Vi~~ag-------------------------~~~~~~~~ll~~~~~~~~  179 (250)
                      ++|+|+-+..                         .+......+++.+++.++
T Consensus        66 ~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          66 EIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             TCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             ccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            5777775544                         356677777777777655

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=94.09  E-value=0.009  Score=44.85  Aligned_cols=41  Identities=15%  Similarity=0.249  Sum_probs=34.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCCCccccC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGDENSDKM  118 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~  118 (250)
                      +.++|+|+    | +|+.|++++..|.+.|. +|+++.|+.++.+.+
T Consensus        16 ~~~~vlIl----G-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L   57 (167)
T d1npya1          16 KNAKVIVH----G-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL   57 (167)
T ss_dssp             TTSCEEEE----C-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHH
T ss_pred             CCCeEEEE----C-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHH
Confidence            45789999    5 59999999999999995 799999988665543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.06  E-value=0.026  Score=44.75  Aligned_cols=32  Identities=19%  Similarity=0.401  Sum_probs=29.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .|+|+    | .|.+|..++.+|.++|++|+++++.+
T Consensus         6 DvvII----G-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVI----G-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            39999    5 69999999999999999999999864

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.22  Score=42.64  Aligned_cols=34  Identities=29%  Similarity=0.479  Sum_probs=29.2

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~  112 (250)
                      ..||||+    | .|.+|..+++.|+..|. ++++++.+.
T Consensus        37 ~~kVlvv----G-~GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          37 TCKVLVI----G-AGGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HCCEEEE----C-SSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             cCeEEEE----C-CCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            4689999    6 58899999999999995 799988765

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.92  E-value=0.034  Score=40.61  Aligned_cols=36  Identities=33%  Similarity=0.434  Sum_probs=29.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ++.|+|.   -.|.||||..++..|.+.|++|+++.+.+
T Consensus        39 ~~~vvi~---d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVIL---NADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEE---ECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEE---ecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4555554   03679999999999999999999999876

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.78  E-value=0.13  Score=38.14  Aligned_cols=32  Identities=19%  Similarity=0.200  Sum_probs=25.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTV  110 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R  110 (250)
                      +.||.|+    | +|.+|+.+++.|.+. +.+++++..
T Consensus         3 kirvgii----G-~G~ig~~~~~~l~~~~~~elvav~~   35 (170)
T d1f06a1           3 NIRVAIV----G-YGNLGRSVEKLIAKQPDMDLVGIFS   35 (170)
T ss_dssp             CEEEEEE----C-CSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEE----C-ChHHHHHHHHHHHhCCCcEEEEEEe
Confidence            4689999    5 799999999999875 677776543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.77  E-value=0.054  Score=37.69  Aligned_cols=37  Identities=11%  Similarity=0.146  Sum_probs=32.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      ..++|+|+    | .|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        21 ~~~~vvVv----G-gG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          21 PGSTVVVV----G-GSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCEEEEE----C-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence            35899999    5 6999999999999999999999997643

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=93.67  E-value=0.051  Score=40.78  Aligned_cols=100  Identities=22%  Similarity=0.269  Sum_probs=56.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCC-----CCCCCcccc----------hhcCCceEEe-
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMK-----KPPFNRFNE----------IVSAGGKTVW-  138 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~-----~~~~~~~~~----------~~~~~v~~v~-  138 (250)
                      +||.|=     |-|.||+.+.+.|.+++.+|+++.-.. ..+.+.     +....+|..          +....+.+.. 
T Consensus         1 ikigIN-----GfGRIGR~~~R~l~~~~i~iv~INd~~-~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~   74 (168)
T d2g82a1           1 MKVGIN-----GFGRIGRQVFRILHSRGVEVALINDLT-DNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV   74 (168)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHTCCEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC
T ss_pred             CEEEEE-----CCcHHHHHHHHHHhcCCCEEEEECCCc-chhhhhheeecccccCccccccccccceeEecceeEEEEec
Confidence            467777     689999999999999999998886432 222110     000111111          0111122222 


Q ss_pred             CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       139 ~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .|++++...-  ..+|+|+.|.|....  ...++.-.+.|++++|.
T Consensus        75 ~~p~~i~W~~--~gvdiViEcTG~f~~--~~~~~~hl~~gakkVii  116 (168)
T d2g82a1          75 KDPKEIPWAE--AGVGVVIESTGVFTD--ADKAKAHLEGGAKKVII  116 (168)
T ss_dssp             SSGGGCCTGG--GTEEEEEECSSSCCB--HHHHTHHHHTTCSEEEE
T ss_pred             CChHHCcccc--cCCceeEeccccccc--hHHhhhhhccccceeee
Confidence            1355555433  348999999996432  22333333468999887

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=93.59  E-value=0.032  Score=43.58  Aligned_cols=39  Identities=13%  Similarity=0.200  Sum_probs=26.1

Q ss_pred             cCcEEEEEecCCCcchhhHH-HHHHHHHhC-CCeEEEE-EcCCCccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGF-YLAKELLGS-GHEVTIM-TVGDENSD  116 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~-~l~~~Ll~~-G~~V~~l-~R~~~~~~  116 (250)
                      ++-+|-|+    | +|.+|+ +++..+... +.+|+++ +|+++..+
T Consensus        32 ~~iriaiI----G-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~   73 (221)
T d1h6da1          32 RRFGYAIV----G-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAK   73 (221)
T ss_dssp             CCEEEEEE----C-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHH
T ss_pred             CCEEEEEE----c-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHH
Confidence            34689999    5 799997 566655554 6777754 56655444

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.59  E-value=0.037  Score=40.75  Aligned_cols=24  Identities=29%  Similarity=0.344  Sum_probs=21.7

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH  103 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~  103 (250)
                      +|-|+    ||||++|..+++.|.+..+
T Consensus         3 kVaIv----GATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVV----GATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEE----TTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEE----CCCcHHHHHHHHHHHcCCC
Confidence            79999    9999999999998888754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.42  E-value=0.031  Score=43.79  Aligned_cols=33  Identities=21%  Similarity=0.429  Sum_probs=29.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      |+|+|+    | .|.-|...+.+|.++|++|+++.+++
T Consensus         1 m~V~II----G-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVV----G-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEE----C-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEE----C-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            579999    6 59999999999999999999998764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.36  E-value=0.04  Score=40.15  Aligned_cols=34  Identities=24%  Similarity=0.572  Sum_probs=30.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      .++|+|||+    || |.+|..-++.|++.|.+|++++.
T Consensus        11 l~gkrvLVi----Gg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLI----GG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEE----EE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEE----CC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            457999999    65 99999999999999999999974

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.23  E-value=0.075  Score=39.04  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=30.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~  112 (250)
                      +|+|.|.    |+||-||....+-+.+.  .++|.+++-+.
T Consensus         2 pK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVL----GATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEE----CCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5899999    99999999999988765  58999987554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.01  E-value=0.061  Score=41.20  Aligned_cols=37  Identities=16%  Similarity=0.085  Sum_probs=32.8

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .-.+++|.|+     |.|-||+.+++.|..-|.+|.+.++..
T Consensus        46 eL~gktvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~   82 (193)
T d1mx3a1          46 RIRGETLGII-----GLGRVGQAVALRAKAFGFNVLFYDPYL   82 (193)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred             eeeCceEEEe-----ccccccccceeeeeccccceeeccCcc
Confidence            3457899999     689999999999999999999998865

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.90  E-value=0.14  Score=35.51  Aligned_cols=37  Identities=27%  Similarity=0.335  Sum_probs=29.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH---hCCCeEEEEEcCCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL---GSGHEVTIMTVGDEN  114 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll---~~G~~V~~l~R~~~~  114 (250)
                      .+++++|+    || |++|-.++..|.   .+|.+|+++.|.+.-
T Consensus        19 ~p~~v~iv----Gg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          19 PPRRVLTV----GG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             CCSEEEEE----CS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             cCCeEEEE----CC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            35799999    65 999999996554   456789999987643

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.07  Score=41.09  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=44.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcc-ccCCCCCCCcccc-hhcCCceEEeC---CHHHHHhhhc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENS-DKMKKPPFNRFNE-IVSAGGKTVWG---DPAEVGNVVG  149 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~-~~~~~~~~~~~~~-~~~~~v~~v~~---D~~~l~~~l~  149 (250)
                      |||+|.    | .+..|..+++.|++.|++|.++.-.++.. .....   ..+.. ....++.+...   +.+++.+.++
T Consensus         1 Mkiv~~----~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~---~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~   72 (203)
T d2blna2           1 MKTVVF----A-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFY---GSVARLAAERGIPVYAPDNVNHPLWVERIA   72 (203)
T ss_dssp             CEEEEE----E-CHHHHHHHHHHHHHTTCEEEEEECCCC------CC---CCHHHHHHHHTCCEECCSCCCSHHHHHHHH
T ss_pred             CeEEEE----e-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCccccc---CHHHHHHHHcCCcceecccccchhhhhhhh
Confidence            688999    5 56689999999999999997765333221 11101   11111 12334554432   2445555666


Q ss_pred             CCcccEEEeCC
Q 025587          150 GVTFDVVLDNN  160 (250)
Q Consensus       150 ~~~~d~Vi~~a  160 (250)
                      ...+|.++...
T Consensus        73 ~~~~Dlii~~g   83 (203)
T d2blna2          73 QLSPDVIFSFY   83 (203)
T ss_dssp             HTCCSEEEEES
T ss_pred             hhcccceeeee
Confidence            66789887554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.78  E-value=0.07  Score=41.51  Aligned_cols=37  Identities=32%  Similarity=0.425  Sum_probs=32.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ...++|+|+    | .|..|...+.+|.++|++|+++.+..+
T Consensus        47 ~~~k~VvII----G-aGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIV----G-AGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEE----c-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence            456899999    5 699999999999999999999987653

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.73  E-value=0.19  Score=38.23  Aligned_cols=25  Identities=32%  Similarity=0.285  Sum_probs=21.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSG  102 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G  102 (250)
                      |.++|-|-     |-|.||+.+.+.+++++
T Consensus         1 M~ikigIN-----GFGRIGR~vlR~~~~~~   25 (190)
T d1k3ta1           1 MPIKVGIN-----GFGRIGRMVFQALCEDG   25 (190)
T ss_dssp             CCEEEEEE-----CCSHHHHHHHHHHHHTT
T ss_pred             CCeEEEEE-----CCChHHHHHHHHHHHcC
Confidence            56789999     59999999999999874

>d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein YNL200c (YNU0 YEAST)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.68  E-value=0.035  Score=44.21  Aligned_cols=99  Identities=11%  Similarity=0.072  Sum_probs=58.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      .++|+|. -|.|-+|.=|..++++|..+|++|.++-...........   ..+......++.....+.............
T Consensus        55 ~~~vlil-~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (243)
T d1jzta_          55 GKHVFVI-AGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYK---QLVHQLNFFKVPVLSQDEGNWLEYLKPEKT  130 (243)
T ss_dssp             TCEEEEE-ECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHH---HHHHHHHHTTCCEECSSTTCGGGGGSTTTE
T ss_pred             CCeEEEE-ECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHH---HHHHHHHHCCCceecccccchhhccccccc
Confidence            4578877 688889999999999999999999988654422111100   001112223444444443333333334457


Q ss_pred             cEEEeCC-C--cC---HHhHHHHHHHHHh
Q 025587          154 DVVLDNN-G--KN---LDAVRPVADWAKS  176 (250)
Q Consensus       154 d~Vi~~a-g--~~---~~~~~~ll~~~~~  176 (250)
                      |+||++. |  .+   -.....+++++.+
T Consensus       131 d~iVDal~G~Gl~~~l~~~~~~li~~iN~  159 (243)
T d1jzta_         131 LCIVDAIFGFSFKPPMREPFKGIVEELCK  159 (243)
T ss_dssp             EEEEEESCCTTCCSSCCTTHHHHHHHHHH
T ss_pred             cEEEEeeecccccCcccHHHHHHHHHHHH
Confidence            9999863 2  11   2235667777765

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.57  E-value=0.064  Score=34.88  Aligned_cols=36  Identities=22%  Similarity=0.218  Sum_probs=31.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      +|+|.|.     |+|++|+-++....+-|++|++++-..+.
T Consensus         1 ~k~vgIl-----G~GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVL-----GNGQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEE-----BCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEE-----cCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            4789999     57999999999999999999999976644

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=92.52  E-value=0.45  Score=32.77  Aligned_cols=33  Identities=30%  Similarity=0.325  Sum_probs=28.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      |++||||+    =-.-.+-..+.+.|.+.||+|....
T Consensus         1 M~krILiV----DDd~~~~~~l~~~L~~~g~~v~~a~   33 (121)
T d1mvoa_           1 MNKKILVV----DDEESIVTLLQYNLERSGYDVITAS   33 (121)
T ss_dssp             CCCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCCCEEEE----ECCHHHHHHHHHHHHHCCCEEEEEC
Confidence            56899999    8888999999999999999988654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.49  E-value=0.038  Score=44.16  Aligned_cols=35  Identities=26%  Similarity=0.357  Sum_probs=31.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      |+.+|+|+    | .|-.|..++..|.+.|++|+++.|.+
T Consensus         1 mk~~V~Iv----G-aGp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           1 MKTQVAII----G-AGPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CBCSEEEE----C-CSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCCCEEEE----C-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45589999    5 58999999999999999999999875

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.28  E-value=0.16  Score=38.38  Aligned_cols=36  Identities=17%  Similarity=0.083  Sum_probs=32.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -..++|.|+     |.|.||+.+++.|..-|.+|...+|..
T Consensus        42 l~~~~vgii-----G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          42 LEAMHVGTV-----AAGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ccccceeec-----cccccchhhhhhhhccCceEEEEeecc
Confidence            356899999     589999999999999999999999865

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.23  E-value=0.081  Score=41.83  Aligned_cols=35  Identities=34%  Similarity=0.576  Sum_probs=30.5

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      +.+||+|+    | .|.-|...+.+|.++|++|+++-.++
T Consensus         4 ~~~kViVI----G-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIII----G-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEE----C-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEE----C-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            45689999    5 69999999999999999999997643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.17  E-value=0.066  Score=39.02  Aligned_cols=34  Identities=29%  Similarity=0.310  Sum_probs=29.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCC--eEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGH--EVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~--~V~~l~R~~  112 (250)
                      .|||+|+    | .|++|-.++.+|.+.|+  +|+++.+.+
T Consensus         2 gkrivIv----G-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVV----G-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEE----C-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            5899999    5 69999999999999874  788887655

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.09  E-value=0.065  Score=40.48  Aligned_cols=32  Identities=22%  Similarity=0.332  Sum_probs=29.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -|+|+     |+|..|...+.+|.++|++|.++.+++
T Consensus         7 DviVi-----GaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVL-----GTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            38999     479999999999999999999999875

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=92.07  E-value=0.34  Score=34.56  Aligned_cols=35  Identities=20%  Similarity=0.345  Sum_probs=30.1

Q ss_pred             cCcEEEEEecCCCcc---hhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           73 EKKKVLIVNTNSGGH---AVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        73 ~~~~VlVt~~~~Ggt---G~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      ..|+|.|+    |++   +-.|..+++.|++.||+++.+.-+
T Consensus        12 ~pksIAVV----GaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          12 QAKTIAVL----GAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             HCCEEEEE----TCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CCCeEEEE----eecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            35799999    987   678999999999999999887644

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.02  E-value=0.12  Score=37.96  Aligned_cols=35  Identities=20%  Similarity=0.291  Sum_probs=29.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~  112 (250)
                      ||+|.|.    |+||-||...+.-+.+.  .++|.+++-+.
T Consensus         1 MK~I~Il----GsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTIL----GSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEE----TTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEE----cCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            5789999    99999999999988775  58999987544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.92  E-value=0.028  Score=42.25  Aligned_cols=40  Identities=20%  Similarity=0.227  Sum_probs=32.9

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      .++|+|||+    | +|+.+++++..|.+.| +|+++.|+.++.+.
T Consensus        16 ~~~k~vlIl----G-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~   55 (177)
T d1nvta1          16 VKDKNIVIY----G-AGGAARAVAFELAKDN-NIIIANRTVEKAEA   55 (177)
T ss_dssp             CCSCEEEEE----C-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred             cCCCEEEEE----C-CcHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence            457899999    5 6889999999997777 89999998766553

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=91.84  E-value=0.64  Score=31.86  Aligned_cols=76  Identities=13%  Similarity=0.249  Sum_probs=50.3

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      +||||+    =-.-.+...+...|.+.||+|....                              |.++..+.++...+|
T Consensus         2 ~rILiV----DDd~~~~~~l~~~L~~~g~~v~~a~------------------------------~~~~a~~~~~~~~~d   47 (120)
T d1zgza1           2 HHIVIV----EDEPVTQARLQSYFTQEGYTVSVTA------------------------------SGAGLREIMQNQSVD   47 (120)
T ss_dssp             CEEEEE----CSSHHHHHHHHHHHHHTTCEEEEES------------------------------SHHHHHHHHHHSCCS
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEC------------------------------CHHHHHHHHHhcCCC
Confidence            589999    8899999999999999999987643                              333334444445578


Q ss_pred             EEE---eCCCcCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          155 VVL---DNNGKNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       155 ~Vi---~~ag~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+   +..+.+  |. .+++..+......+|++|+
T Consensus        48 liilD~~mp~~~--g~-~~~~~~~~~~~~piI~lt~   80 (120)
T d1zgza1          48 LILLDINLPDEN--GL-MLTRALRERSTVGIILVTG   80 (120)
T ss_dssp             EEEEESCCSSSC--HH-HHHHHHHTTCCCEEEEEES
T ss_pred             EEeeehhhccch--hH-HHHHHHhccCCCeEEEEEc
Confidence            777   233333  22 3445555555556787776

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.83  E-value=0.082  Score=43.11  Aligned_cols=28  Identities=18%  Similarity=0.102  Sum_probs=24.9

Q ss_pred             CcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           85 GGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        85 GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -.+|..|.+|+++|+.+|++|+++.+..
T Consensus        43 ~SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          43 FSSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            3479999999999999999999998764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=91.77  E-value=0.073  Score=39.90  Aligned_cols=30  Identities=27%  Similarity=0.327  Sum_probs=25.7

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      ||-|-     |-|.||+.+.+.+++++.+|+++.-
T Consensus         2 kIgIN-----GfGRIGR~~~R~~~~~~~~ivaINd   31 (169)
T d1dssg1           2 KIGIN-----GFGRIGRLVLRAALEMGAQVVAVND   31 (169)
T ss_dssp             CEEEE-----CCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             eEEEE-----CCcHHHHHHHHHHHhCCCcEEEECC
Confidence            56777     5999999999999999998888764

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.76  E-value=0.54  Score=32.20  Aligned_cols=31  Identities=29%  Similarity=0.292  Sum_probs=26.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      |||||+    =-.-.+...+...|.+.||+|....
T Consensus         1 KrILiV----dDd~~~~~~l~~~L~~~g~~v~~a~   31 (117)
T d2a9pa1           1 KKILIV----DDEKPISDIIKFNMTKEGYEVVTAF   31 (117)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEEC
Confidence            689999    8888899999999999999998654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.56  E-value=0.088  Score=39.18  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=32.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..|+|+|+     |.|.||+.+++.|...|.+|++.+..+
T Consensus        23 ~Gk~v~V~-----GyG~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          23 AGKVAVVA-----GYGDVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             TTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCCEEEEe-----ccccccHHHHHHHHhCCCeeEeeeccc
Confidence            46899999     699999999999999999999998876

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.45  E-value=0.4  Score=35.55  Aligned_cols=89  Identities=17%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CcEEEEEecCCCcchhhHHHH-HHHHHhCC--CeEEEE-EcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYL-AKELLGSG--HEVTIM-TVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVG  149 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l-~~~Ll~~G--~~V~~l-~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~  149 (250)
                      +.+|.|+    | +|.+|+.+ +..+.+.+  .+|+++ +++++..+.+.+          ..+...+..|   ++++++
T Consensus         3 kirigiI----G-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~----------~~~~~~~~~~---~~ell~   64 (181)
T d1zh8a1           3 KIRLGIV----G-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAK----------MVGNPAVFDS---YEELLE   64 (181)
T ss_dssp             CEEEEEE----C-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHH----------HHSSCEEESC---HHHHHH
T ss_pred             CcEEEEE----c-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhc----------cccccceeee---eecccc
Confidence            3589999    5 79999864 56665533  567755 455443332210          0122222333   344455


Q ss_pred             CCcccEEEeCCC-------------------------cCHHhHHHHHHHHHhCCCC
Q 025587          150 GVTFDVVLDNNG-------------------------KNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       150 ~~~~d~Vi~~ag-------------------------~~~~~~~~ll~~~~~~~~~  180 (250)
                      ..++|+|+-+..                         .+......+++.+++.+..
T Consensus        65 ~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          65 SGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             SSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             ccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            545777775544                         3667777778888776653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.43  E-value=0.61  Score=33.89  Aligned_cols=100  Identities=9%  Similarity=0.083  Sum_probs=54.5

Q ss_pred             cEEEEEecCCCcchhhHHH-HHHHHHhC-CCeEEEEEcCCCccccCC-----CCCCCcccchhcCCce--EEeCC----H
Q 025587           75 KKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIMTVGDENSDKMK-----KPPFNRFNEIVSAGGK--TVWGD----P  141 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~-l~~~Ll~~-G~~V~~l~R~~~~~~~~~-----~~~~~~~~~~~~~~v~--~v~~D----~  141 (250)
                      +||.|+    | .|.+|.. .+..|.+. +.++++++++++....+.     ...+..+.++...++.  ++...    .
T Consensus         2 irvgii----G-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~~H~   76 (167)
T d1xeaa1           2 LKIAMI----G-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHS   76 (167)
T ss_dssp             EEEEEE----C-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHH
T ss_pred             eEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceecccccccccc
Confidence            589999    5 6888866 45555444 567777777654433321     1112223333322332  11111    3


Q ss_pred             HHHHhhhcCCcccEEEeC-CCcCHHhHHHHHHHHHhCCCC
Q 025587          142 AEVGNVVGGVTFDVVLDN-NGKNLDAVRPVADWAKSSGVK  180 (250)
Q Consensus       142 ~~l~~~l~~~~~d~Vi~~-ag~~~~~~~~ll~~~~~~~~~  180 (250)
                      +-+.++++. ..++++.- .+.+......+++++++.+..
T Consensus        77 ~~~~~al~~-gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          77 TLAAFFLHL-GIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             HHHHHHHHT-TCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             ccccccccc-ccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            333333432 24554443 236788899999999998764

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.42  E-value=0.25  Score=36.36  Aligned_cols=26  Identities=23%  Similarity=0.257  Sum_probs=20.2

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGS  101 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~  101 (250)
                      ...+.+|.|+    | +|.+|+..++.|.+.
T Consensus         4 ~~~k~kv~iI----G-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           4 NSGKFGVVVV----G-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCCSEEEEEE----C-CSHHHHHHHHHHTSH
T ss_pred             CCCCcEEEEE----c-CCHHHHHHHHHHHhC
Confidence            3446799999    5 699999988877654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=91.30  E-value=0.066  Score=36.66  Aligned_cols=37  Identities=19%  Similarity=0.108  Sum_probs=30.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      .-.+|+|+|+    | +|--|.-++.+|.+.+-+|+.+.|..
T Consensus        29 ~f~gK~VlVV----G-~g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          29 LFVGESVLVV----G-GASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGTTCCEEEE----C-SSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hcCCCeEEEE----C-CCCCHHHHHHHHHHhcCEEEEEEecC
Confidence            4567999999    4 68999999999999887777666654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.30  E-value=0.08  Score=42.45  Aligned_cols=32  Identities=31%  Similarity=0.706  Sum_probs=28.5

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~  112 (250)
                      +|+|+    | .|.+|..++.+|.++|. +|++++|+.
T Consensus         3 dViII----G-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVII----G-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEE----C-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            69999    5 69999999999999995 799999874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.28  E-value=0.11  Score=39.64  Aligned_cols=38  Identities=24%  Similarity=0.283  Sum_probs=32.8

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ....++|.|+     |.|.||+.+++.|..-|.+|...++...
T Consensus        44 ~l~g~tvgIi-----G~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          44 KLDNKTLGIY-----GFGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             eecccceEEe-----ecccchHHHHHHHHhhcccccccccccc
Confidence            3457899999     6899999999999999999999987653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.09  E-value=0.092  Score=41.53  Aligned_cols=32  Identities=22%  Similarity=0.379  Sum_probs=28.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -|+|+    | .|.+|..++.+|.++|++|+++.+..
T Consensus         5 DvvII----G-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVV----G-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEE----C-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            48999    5 69999999999999999999999854

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.92  E-value=0.28  Score=33.63  Aligned_cols=38  Identities=26%  Similarity=0.281  Sum_probs=30.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH---hCCCeEEEEEcCCCcc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL---GSGHEVTIMTVGDENS  115 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll---~~G~~V~~l~R~~~~~  115 (250)
                      .+++++|+    | .|++|-.++..|.   +.|.+|+++.|.+.-.
T Consensus        17 ~p~~v~Ii----G-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~il   57 (117)
T d1feca2          17 APKRALCV----G-GGYISIEFAGIFNAYKARGGQVDLAYRGDMIL   57 (117)
T ss_dssp             CCSEEEEE----C-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred             cCCeEEEE----C-CChHHHHHHHHhHhhcccccccceeccccccc
Confidence            35799999    5 6999999997654   3589999999976433

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.91  E-value=0.12  Score=39.02  Aligned_cols=38  Identities=24%  Similarity=0.148  Sum_probs=32.6

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ...++++.|+     |.|.||+.+++.|..-|.+|++.++..+
T Consensus        41 ~l~~k~vgii-----G~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          41 EIFGKTVGVV-----GLGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             CCTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccceeeeec-----cccchhHHHHHHhhhccceEEeecCCCC
Confidence            4457899999     5899999999999999999999987653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.67  E-value=0.22  Score=38.44  Aligned_cols=82  Identities=13%  Similarity=0.085  Sum_probs=50.2

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCC-------------CCCCcccchhcCCceEEe
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKK-------------PPFNRFNEIVSAGGKTVW  138 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~-------------~~~~~~~~~~~~~v~~v~  138 (250)
                      ..+.+||..    | +|. | ..+..|+++|++|++++-+++.++...+             ..-..+.......++++.
T Consensus        44 ~~~~rvLd~----G-CG~-G-~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  116 (229)
T d2bzga1          44 KSGLRVFFP----L-CGK-A-VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYC  116 (229)
T ss_dssp             CCSCEEEET----T-CTT-C-THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE
T ss_pred             CCCCEEEEe----C-CCC-c-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEE
Confidence            345799999    4 443 4 3466678899999999988754432110             000111122345678888


Q ss_pred             CCHHHHHhhhcCCcccEEEeCCC
Q 025587          139 GDPAEVGNVVGGVTFDVVLDNNG  161 (250)
Q Consensus       139 ~D~~~l~~~l~~~~~d~Vi~~ag  161 (250)
                      +|..++.....+ .+|+|+....
T Consensus       117 ~d~~~l~~~~~~-~fd~i~~~~~  138 (229)
T d2bzga1         117 CSIFDLPRTNIG-KFDMIWDRGA  138 (229)
T ss_dssp             SCGGGGGGSCCC-CEEEEEESSS
T ss_pred             cchhhccccccC-ceeEEEEEEE
Confidence            886666544333 4899997765

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.58  E-value=0.42  Score=35.57  Aligned_cols=81  Identities=15%  Similarity=0.076  Sum_probs=50.5

Q ss_pred             cccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCce-EEeCCHHHHHhhhc
Q 025587           71 AAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGK-TVWGDPAEVGNVVG  149 (250)
Q Consensus        71 ~~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~D~~~l~~~l~  149 (250)
                      ...+|+|+|+    |-+.-+|+-++..|+++|..|+........... ...   .+ .+...+.. .-....+.+.+...
T Consensus        26 ~l~GK~vvVI----GrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~-~~~---~~-~~~~~~~~~~~~~~~~~lk~~~~   96 (171)
T d1edza1          26 RLYGKKCIVI----NRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-RGE---SL-KLNKHHVEDLGEYSEDLLKKCSL   96 (171)
T ss_dssp             TTTTCEEEEE----CCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-SCC---CS-SCCCCEEEEEEECCHHHHHHHHH
T ss_pred             CCCCCEEEEE----CCccccHHHHHHHHHHCCCEEEEeccccccccc-ccc---ce-eeeeeccccccccchhHHhhccc
Confidence            4567999999    999999999999999999999987654311000 000   00 00011111 11223566777665


Q ss_pred             CCcccEEEeCCCc
Q 025587          150 GVTFDVVLDNNGK  162 (250)
Q Consensus       150 ~~~~d~Vi~~ag~  162 (250)
                      .  .|+||...|.
T Consensus        97 ~--aDIvIsavG~  107 (171)
T d1edza1          97 D--SDVVITGVPS  107 (171)
T ss_dssp             H--CSEEEECCCC
T ss_pred             c--CCEEEEccCC
Confidence            5  5999988873

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.13  Score=37.79  Aligned_cols=35  Identities=40%  Similarity=0.509  Sum_probs=29.8

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      .++|+|+    | .|++|-.++..|.+.|++|+++.+.++
T Consensus         3 ~~~VvII----G-gG~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIV----G-TGLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEE----C-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEE----C-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence            5789999    5 699999999999999999888766553

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=90.55  E-value=0.26  Score=37.21  Aligned_cols=96  Identities=13%  Similarity=0.074  Sum_probs=59.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchh---cCC------------ceEE
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIV---SAG------------GKTV  137 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~---~~~------------v~~v  137 (250)
                      .+-+|+|+    | .|-.|.+-++-.+.-|.+|+++|.+.+..+.+.... .++-++.   ...            -++.
T Consensus        28 ~pa~VvVi----G-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~-~~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          28 PPARVLVF----G-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG-GKFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCCEEEEE----C-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT-CEECCC-----------------------
T ss_pred             CCcEEEEE----c-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh-cceEEEeccccccccccccchhhcCHHHH
Confidence            45699999    5 699999999999999999999999887666543221 0000000   000            0111


Q ss_pred             eCCHHHHHhhhcCCcccEEEeCCCc-----CHHhHHHHHHHHHh
Q 025587          138 WGDPAEVGNVVGGVTFDVVLDNNGK-----NLDAVRPVADWAKS  176 (250)
Q Consensus       138 ~~D~~~l~~~l~~~~~d~Vi~~ag~-----~~~~~~~ll~~~~~  176 (250)
                      ....+.+.+.+..  .|.||-.+-+     -..-+..+++.|+.
T Consensus       102 ~~~~~~l~~~l~~--aDlVI~talipG~~aP~lit~~mv~~Mk~  143 (183)
T d1l7da1         102 KKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMKP  143 (183)
T ss_dssp             CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSCT
T ss_pred             HHHHHHHHHHHHh--hhhheeeeecCCcccceeehHHHHHhcCC
Confidence            2225667777776  6999977642     11235666666665

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.55  E-value=0.33  Score=36.20  Aligned_cols=37  Identities=19%  Similarity=0.257  Sum_probs=33.6

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..+|+|+|+    |.+..+|+.++..|+++|..|+++....
T Consensus        37 l~Gk~vvVI----GrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          37 IAGRHAVVV----GRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CTTCEEEEE----CCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cccceEEEE----ecCCccchHHHHHHHhccCceEEEeccc
Confidence            467999999    9999999999999999999999987654

>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Escherichia coli [TaxId: 562]

Probab=90.54  E-value=1.5  Score=29.92  Aligned_cols=31  Identities=19%  Similarity=0.209  Sum_probs=27.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      |||||+    --.-.+...+...|.+.||+|....
T Consensus         1 KkILiV----DD~~~~~~~l~~~L~~~g~~v~~a~   31 (121)
T d1zesa1           1 RRILVV----EDEAPIREMVCFVLEQNGFQPVEAE   31 (121)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEC
Confidence            689999    8889999999999999999987654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=90.14  E-value=0.17  Score=38.80  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=32.8

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      .++++|.|-     |-|-+|+++++.|.+.|.+|++.+.+.+.
T Consensus        25 L~gk~v~Iq-----G~G~VG~~~A~~L~~~Gakvvv~d~d~~~   62 (201)
T d1c1da1          25 LDGLTVLVQ-----GLGAVGGSLASLAAEAGAQLLVADTDTER   62 (201)
T ss_dssp             STTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEecchHHH
Confidence            467899999     58999999999999999999988766543

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.13  E-value=0.063  Score=39.95  Aligned_cols=35  Identities=29%  Similarity=0.403  Sum_probs=29.0

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      |+.+|+|+    | .|++|-.++..|.+.|++|.++.+.+
T Consensus         2 m~a~VvII----G-gG~~G~e~A~~l~~~g~~v~i~~~~~   36 (183)
T d1d7ya1           2 LKAPVVVL----G-AGLASVSFVAELRQAGYQGLITVVGD   36 (183)
T ss_dssp             CCSSEEEE----C-CSHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred             CCCCEEEE----C-ccHHHHHHHHHHHhcCCceEEEEEec
Confidence            56679999    5 69999999999999998877766544

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.97  E-value=0.5  Score=34.27  Aligned_cols=38  Identities=13%  Similarity=0.026  Sum_probs=25.2

Q ss_pred             CcEEEEEecCCCcchhhHHH-HHHHHHhC-CCeEEEE-EcCCCccc
Q 025587           74 KKKVLIVNTNSGGHAVIGFY-LAKELLGS-GHEVTIM-TVGDENSD  116 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~-l~~~Ll~~-G~~V~~l-~R~~~~~~  116 (250)
                      +++|.|+    | +|.+|.. .+..|.+. +.+++++ +++.+...
T Consensus         1 Kiri~iI----G-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~   41 (164)
T d1tlta1           1 KLRIGVV----G-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKAL   41 (164)
T ss_dssp             CEEEEEE----C-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHH
T ss_pred             CCEEEEE----c-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhh
Confidence            4689999    6 7999976 45555543 6777655 46555544

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.85  E-value=0.021  Score=44.14  Aligned_cols=26  Identities=31%  Similarity=0.445  Sum_probs=23.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEV  105 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V  105 (250)
                      |||+|+    | .|.+|...+.+|+++|++|
T Consensus         1 mkV~VI----G-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVI----G-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEE----C-chHHHHHHHHHHHHCCCCc
Confidence            689999    5 6999999999999999864

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.70  E-value=0.13  Score=41.59  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.7

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..|+|+    | +|..|..+|++|.+.|++|.++.+++
T Consensus         2 ~dv~II----G-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIV----G-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEE----C-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEE----C-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            579999    5 69999999999999999999998765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.68  E-value=0.19  Score=41.03  Aligned_cols=35  Identities=29%  Similarity=0.425  Sum_probs=30.3

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC--CeEEEEEcCCC
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG--HEVTIMTVGDE  113 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G--~~V~~l~R~~~  113 (250)
                      .|+|+|+    | +|.-|...+..|+++|  ++|+++.|+.+
T Consensus         4 ~KrVaII----G-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAII----G-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEE----C-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEE----C-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            5799999    5 6999999999999886  69999998753

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.44  E-value=0.64  Score=37.60  Aligned_cols=35  Identities=14%  Similarity=0.156  Sum_probs=30.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      -++++|+|-     |-|-+|+++++.|.+.|.+|+.++-.
T Consensus        34 L~gktvaIq-----GfGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          34 FGDKTFAVQ-----GFGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             STTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            456899999     57999999999999999999988743

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=89.32  E-value=0.045  Score=39.73  Aligned_cols=33  Identities=9%  Similarity=0.103  Sum_probs=22.2

Q ss_pred             cchhhHHHHHHHHHhCCCeEEEEEcCCCccccC
Q 025587           86 GHAVIGFYLAKELLGSGHEVTIMTVGDENSDKM  118 (250)
Q Consensus        86 gtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~  118 (250)
                      |+|.+|+++++.|.+.++.+.+.+|+.++.+.+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l   38 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNL   38 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHH
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcch
Confidence            689999999997755444456788887665544

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.23  E-value=0.39  Score=36.52  Aligned_cols=83  Identities=18%  Similarity=0.116  Sum_probs=45.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCC-CCCc-ccchhcCCceEEeCC---HHHHHhh
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKP-PFNR-FNEIVSAGGKTVWGD---PAEVGNV  147 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~-~~~~-~~~~~~~~v~~v~~D---~~~l~~~  147 (250)
                      .+|||+++    | ++..+..+.+.|++.|++|.++.-.++........ .... .......++.....+   .+.+.+.
T Consensus         2 ~~mKI~f~----G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (206)
T d1fmta2           2 ESLRIIFA----G-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQL   76 (206)
T ss_dssp             CCCEEEEE----E-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHH
T ss_pred             CCcEEEEE----C-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHH
Confidence            46899999    5 67889999999999999987765433221110000 0000 001122344443332   4555666


Q ss_pred             hcCCcccEEEeCC
Q 025587          148 VGGVTFDVVLDNN  160 (250)
Q Consensus       148 l~~~~~d~Vi~~a  160 (250)
                      ++...+|+++.+.
T Consensus        77 ~~~~~~d~~v~~~   89 (206)
T d1fmta2          77 VAELQADVMVVVA   89 (206)
T ss_dssp             HHHTTCSEEEEES
T ss_pred             HhhhcceEEEeec
Confidence            6666688776443

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=89.20  E-value=0.4  Score=35.51  Aligned_cols=100  Identities=22%  Similarity=0.201  Sum_probs=53.8

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccCC-----CCCCCcccc----------hhcCCceEEe
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKMK-----KPPFNRFNE----------IVSAGGKTVW  138 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~-----~~~~~~~~~----------~~~~~v~~v~  138 (250)
                      +||-|-     |-|.||+.+.+.++++. .+|+++.-.. ..+.+.     +....+|..          +.+..+.+..
T Consensus         2 ikigIN-----GFGRIGR~v~R~~~~~~~i~ivaINd~~-~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~   75 (166)
T d1gado1           2 IKVGIN-----GFGRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTA   75 (166)
T ss_dssp             EEEEEE-----CCSHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred             eEEEEE-----CCcHHHHHHHHHHhhCCCeEEEEEeCCC-CHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEe
Confidence            467777     59999999999999985 7777776432 222210     111111111          0111122221


Q ss_pred             -CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          139 -GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       139 -~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                       .|++++.---.  .+|+|++|.|....  +.-++.-.+.|++++|.
T Consensus        76 ~~~p~~i~W~~~--gvDiViEcTG~f~t--~~~~~~hl~~gakkVii  118 (166)
T d1gado1          76 ERDPANLKWDEV--GVDVVAEATGLFLT--DETARKHITAGAKKVVM  118 (166)
T ss_dssp             CSSGGGGCHHHH--TCSEEEECSSSCCS--HHHHTHHHHTTCSEEEE
T ss_pred             CCChHHCCcccc--CCCEEEEccccccC--HHHHHHHhcCCCceEEe
Confidence             13555443222  37999999995432  22222333568988775

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.96  E-value=0.26  Score=38.18  Aligned_cols=34  Identities=29%  Similarity=0.428  Sum_probs=30.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDE  113 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~  113 (250)
                      .+|+|+    | .|..|..++..|.+.| ++|+++.|.++
T Consensus         2 ~~V~Iv----G-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIA----G-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEE----C-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEE----C-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            689999    5 6999999999999999 58999988764

>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Aerobic respiration control protein ArcA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.94  E-value=1.7  Score=29.62  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=49.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      .+|||+    =-.-.+...+.+.|.+.||+|.....                              .++..+.+....+|
T Consensus         3 p~ILiV----DDd~~~~~~l~~~L~~~g~~v~~a~~------------------------------~~~al~~l~~~~~d   48 (121)
T d1xhfa1           3 PHILIV----EDELVTRNTLKSIFEAEGYDVFEATD------------------------------GAEMHQILSEYDIN   48 (121)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHTTTCEEEEESS------------------------------HHHHHHHHHHSCCS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEECC------------------------------hHHHHHHHHhcCCC
Confidence            389999    88889999999999999999986542                              22233333444588


Q ss_pred             EEEeCCC-cCHHhHHHHHHHHHhCCCCEEEEEcC
Q 025587          155 VVLDNNG-KNLDAVRPVADWAKSSGVKQFLFISS  187 (250)
Q Consensus       155 ~Vi~~ag-~~~~~~~~ll~~~~~~~~~~~v~iSS  187 (250)
                      .|+--.. ....|. .+++..++..--.+|++|+
T Consensus        49 lii~D~~mp~~~G~-~~~~~~r~~~~~pii~lt~   81 (121)
T d1xhfa1          49 LVIMDINLPGKNGL-LLARELREQANVALMFLTG   81 (121)
T ss_dssp             EEEECSSCSSSCHH-HHHHHHHHHCCCEEEEEES
T ss_pred             EEEeecccCCccCc-HHHHHHHhcCCCcEEEEEC
Confidence            7773322 223332 3445555544346888886

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.91  E-value=0.46  Score=36.19  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=27.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      |||++.     |++..|..+++.|+++||+|.++.-
T Consensus         1 MkI~~~-----G~~~~~~~~l~~L~~~~~~i~~V~t   31 (203)
T d2bw0a2           1 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFT   31 (203)
T ss_dssp             CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEE-----cCCHHHHHHHHHHHHCCCcEEEEEc
Confidence            689999     5788999999999999999987654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.80  E-value=0.18  Score=38.00  Aligned_cols=32  Identities=31%  Similarity=0.544  Sum_probs=28.4

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCC-eEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGH-EVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~-~V~~l~R~~  112 (250)
                      +|+|+    | .|..|...+.+|.++|+ +|+++.+.+
T Consensus         2 ~V~II----G-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVV----G-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEE----C-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEE----C-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            69999    5 69999999999999995 799998765

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=88.59  E-value=0.19  Score=40.88  Aligned_cols=36  Identities=25%  Similarity=0.215  Sum_probs=25.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      ||||++..|++|+=+=--+|+++|.++||+|++++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            577776333332222255799999999999999984

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.42  E-value=0.36  Score=35.75  Aligned_cols=101  Identities=20%  Similarity=0.182  Sum_probs=53.6

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCC---CccccCC--CCCCCcccc----------hhcCCceEEe-
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGD---ENSDKMK--KPPFNRFNE----------IVSAGGKTVW-  138 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~---~~~~~~~--~~~~~~~~~----------~~~~~v~~v~-  138 (250)
                      ||-|=     |=|.||+.+.+.++++ ..+|+++.-..   +....+.  +....++..          +....+.+.. 
T Consensus         2 kigIN-----GfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~   76 (166)
T d2b4ro1           2 KLGIN-----GFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAE   76 (166)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECC
T ss_pred             eEEEE-----CCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeC
Confidence            56666     6899999999999987 57777775321   1111110  000111111          0111122222 


Q ss_pred             CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEEE
Q 025587          139 GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLFI  185 (250)
Q Consensus       139 ~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~i  185 (250)
                      -|++++...-.  .+|+|+.|.|...  ++..++.-.+.|++++|..
T Consensus        77 ~~p~~i~W~~~--gvdiViEcTG~f~--~~~~~~~hl~~gakkViiS  119 (166)
T d2b4ro1          77 KDPSQIPWGKC--QVDVVCESTGVFL--TKELASSHLKGGAKKVIMS  119 (166)
T ss_dssp             SSGGGCCHHHH--TCSEEEECSSSCC--SHHHHTHHHHTTCSEEEES
T ss_pred             CChHHcccccc--CCCEEEEeccccc--chhhhhhhhccCCCEEEEe
Confidence            23555443222  3899999999643  2233333345789887763

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.32  E-value=0.22  Score=39.98  Aligned_cols=34  Identities=24%  Similarity=0.594  Sum_probs=24.9

Q ss_pred             cEEEEEecCCCcc-hhh--HHHHHHHHHhCCCeEEEEEcC
Q 025587           75 KKVLIVNTNSGGH-AVI--GFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        75 ~~VlVt~~~~Ggt-G~i--G~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      |||||+ |  ||| |-+  +.+|+++|.++||+|..+...
T Consensus         1 kkili~-~--~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVM-A--GGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEE-C--CSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEE-c--CCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            678887 2  333 333  567999999999999988754

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=88.27  E-value=0.23  Score=40.73  Aligned_cols=32  Identities=16%  Similarity=0.248  Sum_probs=29.2

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -|+|+     |+|+-|..++.+|.++|++|.+|-++.
T Consensus         4 ~VIVV-----GsG~aG~v~A~rLaeaG~~VlvLEaG~   35 (367)
T d1n4wa1           4 PAVVI-----GTGYGAAVSALRLGEAGVQTLMLEMGQ   35 (367)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             eEEEe-----CcCHHHHHHHHHHHHCcCeEEEEecCC
Confidence            48999     589999999999999999999999864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=88.19  E-value=0.25  Score=35.66  Aligned_cols=31  Identities=45%  Similarity=0.546  Sum_probs=26.4

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ||+|+    | .|++|-.++..|. ++++|+++.|.+
T Consensus         2 rVvII----G-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIV----G-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEE----C-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEE----C-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            79999    5 6999999999885 588999998754

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.09  E-value=0.24  Score=37.10  Aligned_cols=33  Identities=30%  Similarity=0.470  Sum_probs=28.1

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhC--CCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGS--GHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~--G~~V~~l~R~~  112 (250)
                      |||+|+    | .|++|-.++..|.+.  +.+|+++.|.+
T Consensus         1 ~KVvII----G-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVL----G-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEE----C-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEE----C-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            689999    5 599999999999876  56899998765

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=87.98  E-value=2.3  Score=28.89  Aligned_cols=33  Identities=21%  Similarity=0.176  Sum_probs=29.0

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      +++|||+    =-.-.+...+...|.+.||+|.....
T Consensus         2 p~rILvV----dDd~~~~~~l~~~L~~~g~~v~~~~~   34 (118)
T d2b4aa1           2 PFRVTLV----EDEPSHATLIQYHLNQLGAEVTVHPS   34 (118)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CCEEEEE----ECCHHHHHHHHHHHHhcCCCeEEECC
Confidence            5789999    99999999999999999999987653

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.90  E-value=0.22  Score=41.35  Aligned_cols=37  Identities=32%  Similarity=0.400  Sum_probs=26.1

Q ss_pred             cEEEEEec-----CCCcchhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           75 KKVLIVNT-----NSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        75 ~~VlVt~~-----~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      ||||++..     ..||-|-.-..|++.|.++||+|++++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            56777510     01555555577899999999999999843

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.68  E-value=0.26  Score=39.30  Aligned_cols=31  Identities=35%  Similarity=0.531  Sum_probs=28.2

Q ss_pred             EEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           77 VLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        77 VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      |+|+    | +|..|...+.+|.++|++|+++.+..
T Consensus         2 ViVI----G-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVV----G-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEE----C-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEE----C-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            7899    4 69999999999999999999998755

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=87.65  E-value=0.25  Score=40.00  Aligned_cols=36  Identities=28%  Similarity=0.488  Sum_probs=31.2

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ....|+|+    | .|..|...+++|.++|.+|+++.+.++
T Consensus         6 ~~~dV~II----G-AG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           6 EEVDVLVV----G-AGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             SEEEEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCCEEEE----C-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            34579999    5 699999999999999999999998643

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.43  E-value=0.33  Score=36.14  Aligned_cols=101  Identities=18%  Similarity=0.214  Sum_probs=54.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEcCCCccccC---C--CCCCCcccc----------hhcCCceEEe
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTVGDENSDKM---K--KPPFNRFNE----------IVSAGGKTVW  138 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~---~--~~~~~~~~~----------~~~~~v~~v~  138 (250)
                      .||-|-     |-|.||+.+.+.+++++ .+|+++.-.....+.+   .  +....++..          +....+.+..
T Consensus         2 ikIgIN-----GFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~   76 (169)
T d1u8fo1           2 VKVGVN-----GFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQ   76 (169)
T ss_dssp             CEEEEE-----CCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEEC
T ss_pred             cEEEEE-----CCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEE
Confidence            478888     59999999999999774 7887775422111111   0  111111111          0111122221


Q ss_pred             -CCHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          139 -GDPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       139 -~D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                       .|++++.  +++..+|+|+.|.|....  ..-++.-.+.|++++|+
T Consensus        77 ~~~p~~i~--W~~~~vDiViEcTG~f~~--~~~~~~hl~~gakkVii  119 (169)
T d1u8fo1          77 ERDPSKIK--WGDAGAEYVVESTGVFTT--MEKAGAHLQGGAKRVII  119 (169)
T ss_dssp             CSSGGGCC--TTTTTCCEEEECSSSCCS--HHHHGGGGGGTCSEEEE
T ss_pred             CCChhhCC--ccccCCCEEEEecceecc--HHHHHHHHhcCCceEee
Confidence             1355443  334458999999996432  11222222458888776

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=87.31  E-value=0.89  Score=33.63  Aligned_cols=99  Identities=18%  Similarity=0.259  Sum_probs=51.5

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC---CCeEEEEEcCCCccccCC-----CCCCCcccc----------hhcCCceEE
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS---GHEVTIMTVGDENSDKMK-----KPPFNRFNE----------IVSAGGKTV  137 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~---G~~V~~l~R~~~~~~~~~-----~~~~~~~~~----------~~~~~v~~v  137 (250)
                      ||-|-     |-|.||+.+.+.++++   +.+|+.+.-.. ..+.+.     +....++..          +.+..+.+.
T Consensus         2 kIgIN-----GfGRIGR~v~R~~~~~~~~~i~vvaINd~~-~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~   75 (169)
T d1hdgo1           2 RVAIN-----GFGRIGRLVYRIIYERKNPDIEVVAINDLT-DTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVF   75 (169)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHHHTCTTCEEEEEECSS-CHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEE
T ss_pred             EEEEE-----CCChHHHHHHHHHHhccCCCEEEEEeccCc-cHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEE
Confidence            56777     5899999999999974   36777764321 222210     000011110          011112222


Q ss_pred             eC-CHHHHHhhhcCCcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          138 WG-DPAEVGNVVGGVTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       138 ~~-D~~~l~~~l~~~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .. |++++.--  +..+|+||.|.|....  ..-++.-.+.|++++|+
T Consensus        76 ~~~~p~~i~W~--~~gvD~ViEcTG~f~t--~~~~~~hl~~GakkVii  119 (169)
T d1hdgo1          76 AEPDPSKLPWK--DLGVDFVIESTGVFRN--REKAELHLQAGAKKVII  119 (169)
T ss_dssp             CCSSGGGSCHH--HHTCCEEEECSSSCCB--HHHHTHHHHTTCSEEEE
T ss_pred             eCCChhhCCcc--ccCCCEEEEecceecc--ccchhhhccCCCceEEE
Confidence            11 35554322  1237999999996532  22233333468999776

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=86.78  E-value=0.52  Score=34.87  Aligned_cols=78  Identities=24%  Similarity=0.303  Sum_probs=42.3

Q ss_pred             CcEEEEEecCCCcchhhHHH--HHHHHHhC----CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhh
Q 025587           74 KKKVLIVNTNSGGHAVIGFY--LAKELLGS----GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNV  147 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~--l~~~Ll~~----G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~  147 (250)
                      ++||.|+    || |.+|..  ++..|+..    +.++++++.+++..+..... ..+.........++..  ..+..++
T Consensus         2 ~mKI~iI----Ga-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~-~~~~~~~~~~~~~i~~--~td~~ea   73 (171)
T d1obba1           2 SVKIGII----GA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI-AKKYVEEVGADLKFEK--TMNLDDV   73 (171)
T ss_dssp             CCEEEEE----TT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH-HHHHHHHTTCCCEEEE--ESCHHHH
T ss_pred             CcEEEEE----CC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHH-HHHHHHhcCCCeEEEE--eCChhhc
Confidence            4799999    75 888764  34445433    46999999987654321100 0000001122233322  2234556


Q ss_pred             hcCCcccEEEeCCC
Q 025587          148 VGGVTFDVVLDNNG  161 (250)
Q Consensus       148 l~~~~~d~Vi~~ag  161 (250)
                      +.+  .|+|+..++
T Consensus        74 L~d--ad~Vv~~~~   85 (171)
T d1obba1          74 IID--ADFVINTAM   85 (171)
T ss_dssp             HTT--CSEEEECCC
T ss_pred             ccC--CCeEeeecc
Confidence            666  599998765

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=86.30  E-value=0.47  Score=35.15  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=33.1

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      ..+|+|+|+    |.+..+|+.++..|.++|..|+++....
T Consensus        35 l~GK~v~VI----GrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          35 TFGLNAVVI----GASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CTTCEEEEE----CCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEEE----eccccccHHHHHHHHHhhcccccccccc
Confidence            457999999    9999999999999999999999886544

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=85.81  E-value=0.37  Score=35.96  Aligned_cols=30  Identities=23%  Similarity=0.321  Sum_probs=22.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~  109 (250)
                      +||.|-     |=|.||+.+.+.+++++    .+|+++.
T Consensus         2 ikigIN-----GfGRIGR~v~R~~~~~~~~~~~~vvaIN   35 (173)
T d1obfo1           2 IRVAIN-----GYGRIGRNILRAHYEGGKSHDIEIVAIN   35 (173)
T ss_dssp             EEEEEE-----CCSHHHHHHHHHHHHTTSCSSEEEEEEE
T ss_pred             eEEEEE-----CCcHHHHHHHHHHHhCCCCCCeEEEEEc
Confidence            478888     59999999999998753    4555554

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=85.80  E-value=0.35  Score=39.35  Aligned_cols=36  Identities=25%  Similarity=0.339  Sum_probs=25.0

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      ||||++-.|++|+=+=--.|+++|.++||+|++++-
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            577776333333223355789999999999999974

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.68  E-value=0.24  Score=37.20  Aligned_cols=30  Identities=17%  Similarity=0.242  Sum_probs=24.7

Q ss_pred             cEEEEEecCCCcch-hhHH-----HHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHA-VIGF-----YLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG-~iG~-----~l~~~Ll~~G~~V~~l~  109 (250)
                      |+++|+     ||| ++|+     .|++.|.++|++|.+++
T Consensus         2 ~~~~i~-----gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVT-----GTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEE-----ESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEE-----ECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999     455 6665     78889999999999986

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.29  E-value=0.43  Score=33.75  Aligned_cols=37  Identities=32%  Similarity=0.341  Sum_probs=30.1

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHH----hCCCeEEEEEcCCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELL----GSGHEVTIMTVGDEN  114 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll----~~G~~V~~l~R~~~~  114 (250)
                      ..++++|+    | .|++|-.++..|.    +.|.+|+++.+.+..
T Consensus        36 ~~k~i~Iv----G-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~   76 (137)
T d1m6ia2          36 EVKSITII----G-GGFLGSELACALGRKARALGTEVIQLFPEKGN   76 (137)
T ss_dssp             HCSEEEEE----C-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred             cCCEEEEE----C-CCHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence            35799999    5 5999999998885    358999999887643

>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Cell division response regulator DivK
species: Caulobacter crescentus [TaxId: 155892]

Probab=84.76  E-value=2.8  Score=28.40  Aligned_cols=31  Identities=29%  Similarity=0.203  Sum_probs=26.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      |||||+    --.-.+-..+.+.|.+.||+|....
T Consensus         2 krILiV----DD~~~~~~~l~~~L~~~g~~v~~a~   32 (123)
T d1mb3a_           2 KKVLIV----EDNELNMKLFHDLLEAQGYETLQTR   32 (123)
T ss_dssp             CEEEEE----CSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             ceEEEE----ECCHHHHHHHHHHHHHCCCEEEEEC
Confidence            789999    8888998888888888999987543

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=84.57  E-value=4.6  Score=27.75  Aligned_cols=36  Identities=14%  Similarity=0.178  Sum_probs=31.7

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      +..+|||-    |-||..|+.-++++++-|-+|++-....
T Consensus         5 k~trVlvQ----GiTG~~G~~ht~~m~~yGT~vVaGVtPg   40 (119)
T d2nu7a1           5 KNTKVICQ----GFTGSQGTFHSEQAIAYGTKMVGGVTPG   40 (119)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCCcEEEE----cCCCcHHHHHHHHHHHhCCceEEEEccC
Confidence            35689999    9999999999999999999998877654

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.47  E-value=1.2  Score=29.21  Aligned_cols=31  Identities=19%  Similarity=0.161  Sum_probs=25.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      |||||+    | +|.=-.+|++.|.+..++|++.--
T Consensus         1 MkVLvi----G-sGgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHIL----G-SGGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEE----E-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEE----C-CCHHHHHHHHHHhcCCCeEEEecC
Confidence            699999    4 677788999999999999998743

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.38  E-value=0.44  Score=36.17  Aligned_cols=35  Identities=23%  Similarity=0.221  Sum_probs=28.7

Q ss_pred             cCcEEEEEecCCCcchhhHH-----HHHHHHHhCCCeEEEEEcC
Q 025587           73 EKKKVLIVNTNSGGHAVIGF-----YLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~-----~l~~~Ll~~G~~V~~l~R~  111 (250)
                      |.|.|.|+    |+.|++|+     .|+..|.++|++|.+++-+
T Consensus         1 m~~vIav~----~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIV----SGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEE----CSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEE----CCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45678899    88888876     6788888999999999854

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.31  E-value=0.6  Score=36.64  Aligned_cols=35  Identities=29%  Similarity=0.211  Sum_probs=30.7

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVG  111 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~  111 (250)
                      .++++|+|-     |-|-+|+++++.|.+.|.+|+.++-.
T Consensus        29 l~g~~v~Iq-----GfGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQ-----GMGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHcCCeEEEeecc
Confidence            457899999     58999999999999999999988743

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.06  E-value=4.5  Score=27.30  Aligned_cols=31  Identities=16%  Similarity=0.169  Sum_probs=26.6

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      +||||+    =-.-.+...+.+.|.+.||+|....
T Consensus         2 irILiV----dDd~~~~~~l~~~L~~~g~~v~~a~   32 (122)
T d1kgsa2           2 VRVLVV----EDERDLADLITEALKKEMFTVDVCY   32 (122)
T ss_dssp             CEEEEE----CSSHHHHHHHHHHHHHTTCEEEEES
T ss_pred             CEEEEE----eCCHHHHHHHHHHHHHCCCEEEEEc
Confidence            689999    8888899999999999999988654

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=84.03  E-value=3.6  Score=27.79  Aligned_cols=32  Identities=22%  Similarity=0.271  Sum_probs=25.9

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      +|||||+    =-.-.+-..+.+.|.+.||+|....
T Consensus         1 NkrILvV----DD~~~~~~~l~~~L~~~g~~v~~a~   32 (119)
T d1peya_           1 NEKILIV----DDQSGIRILLNEVFNKEGYQTFQAA   32 (119)
T ss_dssp             CCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCEEEEE----eCCHHHHHHHHHHHHHcCCEEEEeC
Confidence            3689999    8888888888888888899987543

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=83.84  E-value=1.9  Score=31.83  Aligned_cols=30  Identities=27%  Similarity=0.330  Sum_probs=23.2

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCC---CeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSG---HEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G---~~V~~l~  109 (250)
                      +||.|-     |=|.||+.+.+.++++.   .+|+++.
T Consensus         1 ikIgIN-----GfGRIGR~v~R~~~~~~~~~i~ivaIN   33 (172)
T d1rm4a1           1 LKVAIN-----GFGRIGRNFLRCWHGRKDSPLDVVVIN   33 (172)
T ss_dssp             EEEEEE-----CCSHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred             CEEEEE-----CCCHHHHHHHHHHHhCCCCCEEEEEEc
Confidence            478888     59999999999988754   4566654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.79  E-value=0.53  Score=36.03  Aligned_cols=34  Identities=21%  Similarity=0.387  Sum_probs=29.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      --|+|+    | .|..|...+..|.++|++|.++.+++.
T Consensus         3 yDViII----G-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           3 YDVIVI----G-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             CSEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCEEEE----C-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            358999    5 699999999999999999999998753

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=83.79  E-value=0.48  Score=38.81  Aligned_cols=32  Identities=25%  Similarity=0.353  Sum_probs=28.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -|+|+     |+|+-|..++.+|.+.|++|.+|-++.
T Consensus         9 dvIVV-----GsG~aG~v~A~rLaeaG~~VlvLEaG~   40 (370)
T d3coxa1           9 PALVI-----GSGYGGAVAALRLTQAGIPTQIVEMGR   40 (370)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEE-----CcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            58999     579999999999999999999999863

>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulator PleD, receiver domain
species: Caulobacter crescentus [TaxId: 155892]

Probab=83.48  E-value=3.1  Score=28.95  Aligned_cols=31  Identities=19%  Similarity=0.145  Sum_probs=25.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      -||||+    --.-.+-..+.+.|.+.||+|....
T Consensus         2 arILiV----DD~~~~~~~l~~~L~~~g~~v~~a~   32 (139)
T d1w25a1           2 ARILVV----DDIEANVRLLEAKLTAEYYEVSTAM   32 (139)
T ss_dssp             CEEEEE----CSSTTHHHHHHHHHHHTTCEEEEES
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEEc
Confidence            378999    8888888888888888999987654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=83.45  E-value=0.44  Score=35.16  Aligned_cols=66  Identities=23%  Similarity=0.234  Sum_probs=45.9

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVT  152 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~  152 (250)
                      ..|+|+|.     |=|.+|+-++++|...|.+|+++..++-..-           +..-.+.+     ...++++++.  
T Consensus        22 aGk~vvV~-----GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~al-----------qA~mdGf~-----v~~~~~a~~~--   78 (163)
T d1v8ba1          22 SGKIVVIC-----GYGDVGKGCASSMKGLGARVYITEIDPICAI-----------QAVMEGFN-----VVTLDEIVDK--   78 (163)
T ss_dssp             TTSEEEEE-----CCSHHHHHHHHHHHHHTCEEEEECSCHHHHH-----------HHHTTTCE-----ECCHHHHTTT--
T ss_pred             cCCEEEEe-----cccccchhHHHHHHhCCCEEEEEecCchhhH-----------HHHhcCCc-----cCchhHcccc--
Confidence            36899999     6999999999999999999999887761111           00111222     2234566665  


Q ss_pred             ccEEEeCCC
Q 025587          153 FDVVLDNNG  161 (250)
Q Consensus       153 ~d~Vi~~ag  161 (250)
                      .|++|-+.|
T Consensus        79 aDi~vTaTG   87 (163)
T d1v8ba1          79 GDFFITCTG   87 (163)
T ss_dssp             CSEEEECCS
T ss_pred             CcEEEEcCC
Confidence            488888877

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.04  E-value=0.78  Score=35.12  Aligned_cols=96  Identities=23%  Similarity=0.379  Sum_probs=56.6

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCcc
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTF  153 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~  153 (250)
                      .++|+|. .|.|-+|.=|..++++|.++|++|.++....+.......    .+......+...+....+.   .+.  +.
T Consensus        40 ~~~vlvl-~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~--~~  109 (211)
T d2ax3a2          40 DYRFLVL-CGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEY----NYGLYKKFGGKVVEQFEPS---ILN--EF  109 (211)
T ss_dssp             TCEEEEE-ECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHH----HHHHHHHTTCCEESCCCGG---GGG--GC
T ss_pred             CCcEEEE-ECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHH----HHHHHHHcCCccccccccc---ccc--Cc
Confidence            4678777 688889999999999999999999988765432211100    0111112223322221111   122  26


Q ss_pred             cEEEeCC-Cc-----CHHhHHHHHHHHHhCCC
Q 025587          154 DVVLDNN-GK-----NLDAVRPVADWAKSSGV  179 (250)
Q Consensus       154 d~Vi~~a-g~-----~~~~~~~ll~~~~~~~~  179 (250)
                      |+||++. |.     --.....+++++.+.+.
T Consensus       110 dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~  141 (211)
T d2ax3a2         110 DVVVDAIFGTGLRGEITGEYAEIINLVNKSGK  141 (211)
T ss_dssp             SEEEEESCCTTCCSCCCHHHHHHHHHHHHSCC
T ss_pred             eEEEEecccCCccccchHHHHHHHHHHHhhcc
Confidence            8999875 32     22346678888877654

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=1.2  Score=32.44  Aligned_cols=85  Identities=22%  Similarity=0.178  Sum_probs=57.8

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhC-CCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGS-GHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~-G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      +|+|. |=-|=-=-||..++..+++. ||+|+-+..+-                           .++++.+++...++|
T Consensus         8 kivi~-tv~gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~---------------------------p~e~~~~~~~~~~~d   59 (156)
T d3bula2           8 KMVIA-TVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV---------------------------PAEKILRTAKEVNAD   59 (156)
T ss_dssp             EEEEE-EBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB---------------------------CHHHHHHHHHHHTCS
T ss_pred             EEEEE-eeCCChhhHHHHHHHHHHHHCCCEEEECCCCC---------------------------CHHHHHHHHHhhCCC
Confidence            55554 21122335899999988876 89998654332                           366677777666789


Q ss_pred             EEEeCCC--cCHHhHHHHHHHHHhCCCCEEEEEcCc
Q 025587          155 VVLDNNG--KNLDAVRPVADWAKSSGVKQFLFISSA  188 (250)
Q Consensus       155 ~Vi~~ag--~~~~~~~~ll~~~~~~~~~~~v~iSS~  188 (250)
                      +|.-.+-  ......+.+++.+++.+.+..|+++..
T Consensus        60 ~i~lS~l~~~~~~~~~~~~~~l~~~g~~~~vivGG~   95 (156)
T d3bula2          60 LIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGA   95 (156)
T ss_dssp             EEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEEST
T ss_pred             EEEEecccccchHHHHHHHHHHHhccccceEEEecc
Confidence            8875443  457788999999999887666666653

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.80  E-value=5.2  Score=27.05  Aligned_cols=32  Identities=25%  Similarity=0.368  Sum_probs=26.9

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R  110 (250)
                      .+|||+    -=.-.+...+.+.|.+.||+|.....
T Consensus         4 ~~ILIV----DDd~~~~~~l~~~L~~~g~~v~~a~~   35 (123)
T d1krwa_           4 GIVWVV----DDDSSIRWVLERALAGAGLTCTTFEN   35 (123)
T ss_dssp             CEEEEE----SSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred             CEEEEE----ECCHHHHHHHHHHHHHCCCEEEEeCC
Confidence            479999    88888989998888889999986543

>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein KdpE, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.75  E-value=2.5  Score=28.62  Aligned_cols=30  Identities=33%  Similarity=0.393  Sum_probs=24.5

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEE
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMT  109 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~  109 (250)
                      +|||+    =-.-.+...+.+.|.+.||+|....
T Consensus         2 nILiV----DDd~~~~~~l~~~L~~~g~~v~~a~   31 (119)
T d1zh2a1           2 NVLIV----EDEQAIRRFLRTALEGDGMRVFEAE   31 (119)
T ss_dssp             EEEEE----CSCHHHHHHHHHHHHTTTCEEEEES
T ss_pred             EEEEE----ECCHHHHHHHHHHHHHCCCEEEEeC
Confidence            68888    7788888888888888899987654

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.58  E-value=5.7  Score=27.33  Aligned_cols=36  Identities=19%  Similarity=0.301  Sum_probs=31.6

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      +..||+|-    |=||..|+.-++++++-|-+|++-....
T Consensus         6 k~trVivQ----GiTG~~G~~ht~~m~~yGT~iVaGVtPg   41 (121)
T d1oi7a1           6 RETRVLVQ----GITGREGQFHTKQMLTYGTKIVAGVTPG   41 (121)
T ss_dssp             TTCEEEEE----TTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             CCCcEEEE----cCCCcHHHHHHHHHHHhCCceEeeeecC
Confidence            34689999    9999999999999999999988877654

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=82.36  E-value=0.58  Score=37.71  Aligned_cols=33  Identities=21%  Similarity=0.222  Sum_probs=24.0

Q ss_pred             cEEEEEecCCCcc-hhh--HHHHHHHHHhCCCeEEEEEc
Q 025587           75 KKVLIVNTNSGGH-AVI--GFYLAKELLGSGHEVTIMTV  110 (250)
Q Consensus        75 ~~VlVt~~~~Ggt-G~i--G~~l~~~Ll~~G~~V~~l~R  110 (250)
                      |||||+-   +|| |-+  ..+|+++|.++||+|+.++-
T Consensus         1 mkil~~~---~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLAT---CGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEEC---CSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEC---CCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            5677771   333 333  56799999999999999984

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.21  E-value=2.6  Score=30.59  Aligned_cols=101  Identities=9%  Similarity=0.067  Sum_probs=50.5

Q ss_pred             CcEEEEEecCCCcchhhHHHHHHHHHhCC----CeEEEEEcCCCcccc---CCCCCCCcccc-hhcCCceEEeCCHHHHH
Q 025587           74 KKKVLIVNTNSGGHAVIGFYLAKELLGSG----HEVTIMTVGDENSDK---MKKPPFNRFNE-IVSAGGKTVWGDPAEVG  145 (250)
Q Consensus        74 ~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G----~~V~~l~R~~~~~~~---~~~~~~~~~~~-~~~~~v~~v~~D~~~l~  145 (250)
                      +.+|.|+     |.|.+|+.+++.|.++.    .+|.++..+....-.   +.......+.. ......  ...+.+.+.
T Consensus         4 ~i~I~l~-----G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~   76 (168)
T d1ebfa1           4 VVNVAVI-----GAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT--KTLPLDDLI   76 (168)
T ss_dssp             EEEEEEE-----CCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC--BCCCHHHHH
T ss_pred             EEEEEEE-----eCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc--ccccHHHHH
Confidence            4579999     69999999999999763    345555443211100   00000001111 111111  112345555


Q ss_pred             hhhcC-CcccEEEeCCCcCHHhHHHHHHHHHhCCCCEEEE
Q 025587          146 NVVGG-VTFDVVLDNNGKNLDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       146 ~~l~~-~~~d~Vi~~ag~~~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      +.+.. ...++++++.+..- ......+ +.+.|. ++|.
T Consensus        77 ~~~~~~~~~~vivd~t~~~~-~~~~~~~-aL~~G~-hVVT  113 (168)
T d1ebfa1          77 AHLKTSPKPVILVDNTSSAY-IAGFYTK-FVENGI-SIAT  113 (168)
T ss_dssp             HHHTTCSSCEEEEECSCCHH-HHTTHHH-HHHTTC-EEEC
T ss_pred             HHhccCCCceEEEEecCChH-HHHHHHH-HHHcCC-eEEe
Confidence            55443 34678888877432 2333334 445454 7773

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=82.18  E-value=0.81  Score=35.61  Aligned_cols=38  Identities=21%  Similarity=0.239  Sum_probs=32.5

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCc
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDEN  114 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~  114 (250)
                      .+.++|+|-     |-|-+|+++++.|.+.|.+|++.+.+.+.
T Consensus        37 l~g~~v~Iq-----G~GnVG~~~a~~L~~~Gakvv~~d~~~~~   74 (230)
T d1leha1          37 LEGLAVSVQ-----GLGNVAKALCKKLNTEGAKLVVTDVNKAA   74 (230)
T ss_dssp             CTTCEEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCEEEEE-----CCCHHHHHHHHHHHHCCCEEEeecccHHH
Confidence            467899999     68999999999999999999988765433

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=82.12  E-value=0.66  Score=36.35  Aligned_cols=38  Identities=18%  Similarity=0.316  Sum_probs=30.5

Q ss_pred             ccCcEEEEEecCCCcchhhHH-----HHHHHHHhCCCeEEEEEcCCC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGF-----YLAKELLGSGHEVTIMTVGDE  113 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~-----~l~~~Ll~~G~~V~~l~R~~~  113 (250)
                      ...++|+|+    .|-|++|+     .|+..|.++|++|.+++-++.
T Consensus        17 ~~~~~iii~----sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIML----MGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEE----ECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEE----ECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            345788888    67888887     457889999999999998764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.78  E-value=0.65  Score=37.51  Aligned_cols=32  Identities=41%  Similarity=0.775  Sum_probs=28.9

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      -|+|+     |+|.-|.-++.+|.+.|++|.++-++.
T Consensus         6 DviIV-----GsG~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           6 DVVIV-----GSGPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEE-----CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cEEEE-----CcCHHHHHHHHHHhhCCCeEEEEecCC
Confidence            48999     579999999999999999999998864

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

Probab=81.62  E-value=9.4  Score=29.23  Aligned_cols=105  Identities=18%  Similarity=0.241  Sum_probs=52.2

Q ss_pred             cEEEEEecCCCcchhh--HHHHHHHHHhCCCeEEEEEcCCCccc---cCC-CCCCCcccchh-cCCceEEeCC--HHHHH
Q 025587           75 KKVLIVNTNSGGHAVI--GFYLAKELLGSGHEVTIMTVGDENSD---KMK-KPPFNRFNEIV-SAGGKTVWGD--PAEVG  145 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~i--G~~l~~~Ll~~G~~V~~l~R~~~~~~---~~~-~~~~~~~~~~~-~~~v~~v~~D--~~~l~  145 (250)
                      |||||||    =.|.-  |-....+.++++|+|+++.=..+..-   .+. ..+ -+...+. ..+...+..|  |.++-
T Consensus         1 M~ILltN----DDGi~s~gl~~L~~~l~~~~~V~vvAP~~~~S~~g~ait~~~~-l~~~~~~~~~~~~~~~v~GTPaDcv   75 (247)
T d1j9ja_           1 MRILVTN----DDGIQSKGIIVLAELLSEEHEVFVVAPDKERSATGHSITIHVP-LWMKKVFISERVVAYSTTGTPADCV   75 (247)
T ss_dssp             CEEEEEC----SSCTTCHHHHHHHHHHTTTSEEEEEEESSCCTTCTTCCCCSSC-CCEEECCCSSSEEEEEESSCHHHHH
T ss_pred             CeEEEEc----CCCCCChHHHHHHHHHhcCCeEEEEecCCCCcCCcccccCCCC-cceEEeecCCCceEEEeCCchHHHH
Confidence            6899994    34432  44444555677999999874332211   111 111 1111111 1233444334  54443


Q ss_pred             hh-h---cCCcccEEE------eCCCcC--HHhHHHHHHHHHhCCCCEEEE
Q 025587          146 NV-V---GGVTFDVVL------DNNGKN--LDAVRPVADWAKSSGVKQFLF  184 (250)
Q Consensus       146 ~~-l---~~~~~d~Vi------~~ag~~--~~~~~~ll~~~~~~~~~~~v~  184 (250)
                      .+ +   -+.++|.||      .+.|.+  ..||...+..+.-.|++-|-+
T Consensus        76 ~~al~~l~~~~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~  126 (247)
T d1j9ja_          76 KLAYNVVMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAI  126 (247)
T ss_dssp             HHHHHTTSTTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEE
T ss_pred             HHhhhhcccCcccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCccee
Confidence            33 2   234799999      333433  345655444444568876544

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=81.26  E-value=1.4  Score=32.64  Aligned_cols=30  Identities=30%  Similarity=0.239  Sum_probs=24.1

Q ss_pred             EEEEEecCCCcchhhHHHHHHHHHhCC-CeEEEEEc
Q 025587           76 KVLIVNTNSGGHAVIGFYLAKELLGSG-HEVTIMTV  110 (250)
Q Consensus        76 ~VlVt~~~~GgtG~iG~~l~~~Ll~~G-~~V~~l~R  110 (250)
                      ||-|-     |-|.||+.+.+.++++. .+|+++.-
T Consensus         3 kIgIN-----GfGRIGR~v~R~~l~~~~~~ivaINd   33 (171)
T d3cmco1           3 KVGIN-----GFGRIGRNVFRAALKNPDIEVVAVND   33 (171)
T ss_dssp             EEEEE-----SCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred             EEEEE-----CCCHHHHHHHHHHhhCCCcEEEEEcC
Confidence            67777     58999999999999874 67777653

>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Arylesterase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.79  E-value=8.3  Score=28.05  Aligned_cols=101  Identities=14%  Similarity=-0.021  Sum_probs=53.4

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcCCccc
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGGVTFD  154 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~~~~d  154 (250)
                      +.|+++ .|.|++...=..+++.|.++||+|++++...-.........         ........|...+.+.+...++.
T Consensus        20 ~~vv~l-HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~   89 (271)
T d1va4a_          20 KPVLFS-HGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTG---------NDYDTFADDIAQLIEHLDLKEVT   89 (271)
T ss_dssp             SEEEEE-CCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCSSC---------CSHHHHHHHHHHHHHHHTCCSEE
T ss_pred             CeEEEE-CCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccccc---------cccccccccceeeeeecCCCcce
Confidence            445555 34455666667888999999999999986542111100000         01111111233444445544566


Q ss_pred             EEEeCCCcCHHhHHHHHHHHHh--CCCCEEEEEcCcc
Q 025587          155 VVLDNNGKNLDAVRPVADWAKS--SGVKQFLFISSAG  189 (250)
Q Consensus       155 ~Vi~~ag~~~~~~~~ll~~~~~--~~~~~~v~iSS~~  189 (250)
                      .|.|.-|    |...+..++..  ..+..++.+.+..
T Consensus        90 ~vg~s~g----G~~~~~~~a~~~p~~v~~~v~~~~~~  122 (271)
T d1va4a_          90 LVGFSMG----GGDVARYIARHGSARVAGLVLLGAVT  122 (271)
T ss_dssp             EEEETTH----HHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred             eeccccc----cccccccccccccceeeEEEeecccc
Confidence            6777654    33334444444  3466777776543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=80.60  E-value=0.72  Score=36.59  Aligned_cols=33  Identities=27%  Similarity=0.364  Sum_probs=29.5

Q ss_pred             cEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCC
Q 025587           75 KKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGD  112 (250)
Q Consensus        75 ~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~  112 (250)
                      --|+|+    | .|..|...+.+|.++|++|+++.+.+
T Consensus        17 ~DVlVI----G-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          17 VDVVVV----G-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             CSEEEE----C-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEE----C-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            469999    5 69999999999999999999998764

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.48  E-value=0.087  Score=40.95  Aligned_cols=40  Identities=15%  Similarity=0.148  Sum_probs=33.3

Q ss_pred             cCcEEEEEecCCCcchhhHHHHHHHHHhCCCeEEEEEcCCCcccc
Q 025587           73 EKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVTIMTVGDENSDK  117 (250)
Q Consensus        73 ~~~~VlVt~~~~GgtG~iG~~l~~~Ll~~G~~V~~l~R~~~~~~~  117 (250)
                      ..++|+|+    | .|++|-.++..|.+.|.+|+++.|.+.-...
T Consensus       179 ~~~~vvVi----G-gG~~g~e~A~~l~~~g~~Vtli~r~~~~~~~  218 (233)
T d1djqa3         179 AEAPRLIA----D-ATFTGHRVAREIEEANPQIAIPYKRETIAWG  218 (233)
T ss_dssp             GTSCCCHH----H-HHHHHHHHHHTTTSSCTTSCCCCCCCCCCTT
T ss_pred             cCCceeEe----c-CchHHHHHHHHHHhcCCceEEEEeccccccC
Confidence            35789999    5 6999999999999999999999988754433

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=80.05  E-value=4.2  Score=29.66  Aligned_cols=87  Identities=14%  Similarity=0.166  Sum_probs=57.3

Q ss_pred             ccCcEEEEEecCCCcchhhHHHHHHHHHh-CCCeEEEEEcCCCccccCCCCCCCcccchhcCCceEEeCCHHHHHhhhcC
Q 025587           72 AEKKKVLIVNTNSGGHAVIGFYLAKELLG-SGHEVTIMTVGDENSDKMKKPPFNRFNEIVSAGGKTVWGDPAEVGNVVGG  150 (250)
Q Consensus        72 ~~~~~VlVt~~~~GgtG~iG~~l~~~Ll~-~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~v~~v~~D~~~l~~~l~~  150 (250)
                      ..+.+|++.+-+.- .=.+|..++..+++ .|++|+-+....                           -++++.+....
T Consensus        35 gr~pkVlla~~g~D-~Hd~G~~~va~~l~~~G~eVi~lg~~~---------------------------~~e~iv~aa~~   86 (168)
T d7reqa2          35 GRRPRILLAKMGQD-GHDRGQKVIATAYADLGFDVDVGPLFQ---------------------------TPEETARQAVE   86 (168)
T ss_dssp             SSCCEEEEECBTTC-CCCHHHHHHHHHHHHTTCEEEECCTTB---------------------------CHHHHHHHHHH
T ss_pred             CCCCeEEEEeCCcc-HHHHHHHHHHHHHHhCCcceecCCCcC---------------------------cHHHHHHHHHc
Confidence            34457777745433 34678777777665 589997654322                           25566666665


Q ss_pred             CcccEEEeC--CCcCHHhHHHHHHHHHhCCCCEE-EEEc
Q 025587          151 VTFDVVLDN--NGKNLDAVRPVADWAKSSGVKQF-LFIS  186 (250)
Q Consensus       151 ~~~d~Vi~~--ag~~~~~~~~ll~~~~~~~~~~~-v~iS  186 (250)
                      .++|+|.-+  .+.+......+++.+++.|..++ |+++
T Consensus        87 ~~advI~iSs~~~~~~~~~~~l~~~L~~~g~~~v~VivG  125 (168)
T d7reqa2          87 ADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVG  125 (168)
T ss_dssp             HTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred             cCCCEEEEecCcccchHHHHHHHHHHHhcCCCCeEEEEe
Confidence            568988755  45678889999999999875543 4443