Citrus Sinensis ID: 025601

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPETPVEYY
Secondary Structure (PSIPRED)
ccccccccccccccEEcccccEEEcccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccHHHEEEcccccEEEccccccEEcccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHEEccccccEccccccHHHccHHHHccccEccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHHHccccccHHHHHcccccccccHHHHHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mlgivyrdlkpenvlvrsdghimltdfdlslkcddsasnaqiisdqnppiavlqneylvdhppftsasciipncivpavscfrpkrkrkkktgqhsgpefvvepvdvrsmsfvgtheylapeivsgeghgspvdwWTLGIFLFELFygvtpfrgvdhELTLANIVARAlefpkepavpatAKDLISQLLakdperrlgstkgasaikhhpffqgvnwallrcttppfvpppfnrelvsdescpetpveyy
Flexible Loop (DISEMBL)
mlgivyrdlkpenvlvrsdGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRkrkkktgqhsgpefvvepvdVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNrelvsdescpetpveyy
Low Complexity Region (SEG)
MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPETPVEYY
Disordered region (IsUnstruct)
***IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR****************FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLI*******************AIKHHPFFQGVNWALLRCTTPPFVP*********************
Disordered Region (DISOPRED)
MLGIVYRDLKPENVLVRSDGHIMLTDFDLS**************************************************************************VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCP**P**YY
Disordered Region (DISEMBL)
MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR*************GPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNREL**************
Disordered Region (DISPRO)
MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQII****************************************************SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPET*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPETPVEYY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
A2YBX5	589	Protein kinase G11A OS=Or	N/A	no	0.952	0.404	0.534	2e-69
Q0DCT8	589	Protein kinase G11A OS=Or	no	no	0.952	0.404	0.534	2e-69
Q9LFA2	934	Serine/threonine-protein	no	no	0.888	0.237	0.528	6e-69
Q05999	578	Serine/threonine-protein	no	no	0.904	0.391	0.539	1e-68
P15792	609	Protein kinase PVPK-1 OS=	N/A	no	0.888	0.364	0.534	1e-64
Q64FQ2	525	Protein kinase PINOID 2 O	no	no	0.888	0.422	0.431	6e-57
Q2QM77	484	Protein kinase PINOID OS=	no	no	0.824	0.425	0.506	7e-57
O64682	438	Protein kinase PINOID OS=	no	no	0.832	0.474	0.493	6e-54
Q94E49	493	Protein kinase PINOID 2 O	no	no	0.844	0.427	0.468	3e-51
P93025	915	Phototropin-2 OS=Arabidop	no	no	0.76	0.207	0.426	1e-47

>sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1

 Score =  262 bits (669), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 171/260 (65%), Gaps = 22/260 (8%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQ--NEYL 58
           MLGI+YRDLKPENVLVR DGHIML+DFDLSL+C   A +  +I   NP    L+  N+  
Sbjct: 313 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC---AVSPTLIRSSNPDAEALRKNNQAY 369

Query: 59  VDHPPFTSASCII-PNCIVPAVSCFRP------KRKRKKK---TGQHS-GPEFVVEPVDV 107
              P     SC+I P+C  P  +CF P      K+ RK K     Q S  PE + EP D 
Sbjct: 370 CVQPACVEPSCMIQPSCATP-TTCFGPRFFSKSKKDRKPKPEVVNQVSPWPELIAEPSDA 428

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           RSMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N++ +
Sbjct: 429 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVIGQ 488

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPF 227
            L FP+ P V  +A+DLI  LL K+P++RLG  +GA+ IK HPFF+GVNWAL+RC +PP 
Sbjct: 489 PLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPE 548

Query: 228 VPPPFNRELVSDESCPETPV 247
           VP P     V  E  P+ PV
Sbjct: 549 VPRP-----VEIERPPKQPV 563

May play a role in the regulation of metabolism and signal transduction processes.
Oryza sativa subsp. indica (taxid: 39946)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1

 Score =  261 bits (668), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 171/260 (65%), Gaps = 22/260 (8%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQ--NEYL 58
           MLGI+YRDLKPENVLVR DGHIML+DFDLSL+C   A +  +I   NP    L+  N+  
Sbjct: 313 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC---AVSPTLIRSSNPDAEALRKNNQAY 369

Query: 59  VDHPPFTSASCII-PNCIVPAVSCFRP------KRKRKKK---TGQHS-GPEFVVEPVDV 107
              P     SC+I P+C  P  +CF P      K+ RK K     Q S  PE + EP D 
Sbjct: 370 CVQPACVEPSCMIQPSCATP-TTCFGPRFFSKSKKDRKPKPEVVNQVSPWPELIAEPSDA 428

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           RSMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N++ +
Sbjct: 429 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVIGQ 488

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPF 227
            L FP+ P V  +A+DLI  LL K+P++RLG  +GA+ IK HPFF+GVNWAL+RC +PP 
Sbjct: 489 PLRFPEYPVVSFSARDLIRGLLVKEPQQRLGCKRGATEIKQHPFFEGVNWALIRCASPPE 548

Query: 228 VPPPFNRELVSDESCPETPV 247
           VP P     V  E  P+ PV
Sbjct: 549 VPRP-----VEIERPPKQPV 563

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1

 Score =  260 bits (665), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 131/248 (52%), Positives = 163/248 (65%), Gaps = 26/248 (10%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           MLGI+YRDLKPEN+LVR DGHIMLTDFDLSL+C   A N  ++   +PP      +    
Sbjct: 656 MLGIIYRDLKPENILVREDGHIMLTDFDLSLRC---AVNPTLVRSNSPP----GKDPARI 708

Query: 61  HPPFTSASCIIPNCIVP---AVSCFRPK------RKRKKKTGQH----------SGPEFV 101
             P+ +++CI P CI      VSCF P+      + RK K G H          S P+ V
Sbjct: 709 SGPYNTSNCIQPFCITEPSCQVSCFSPRLSSNQQQGRKPKRGDHLSKTQQHLSRSLPQLV 768

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
            EP + RS SFVGTHEYLAPEI+ GEGHG+ VDWWT G+ L+EL YG TPF+G +++ TL
Sbjct: 769 AEPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETL 828

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
           AN+V + L+FP  P V   AKDLI  LL K+PE RLGS KG+  IK HPFF+G+NWAL+R
Sbjct: 829 ANVVLQNLKFPDSPLVSFQAKDLIRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIR 888

Query: 222 CTTPPFVP 229
           C  PP +P
Sbjct: 889 CAIPPELP 896

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05999|KPK7_ARATH Serine/threonine-protein kinase AtPK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1

 Score =  259 bits (662), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/241 (53%), Positives = 161/241 (66%), Gaps = 15/241 (6%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           MLGI+YRDLKPENVLVR DGHIML+DFDLSL+C   A +  ++      +    + Y + 
Sbjct: 300 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC---AVSPTLVRFAAITLESKSSSYCIQ 356

Query: 61  HPPFTSASCII-PNCIVPAVSCFRP----KRKRKKKTGQHSG-----PEFVVEPVDVRSM 110
                 +SCI+ P+CI P   CF P    K K +KK+   S      PE + EP   RSM
Sbjct: 357 PTCVDQSSCIVQPDCIQPV--CFTPRFLSKGKHRKKSNDMSRQIRPLPELIAEPTSARSM 414

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           SFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G+TPFRG D+  TL N+V + L 
Sbjct: 415 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGITPFRGGDNRATLFNVVGQPLR 474

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
           FP+ P V   A+DLI  LL K+P+ RL   +GA+ IK HPFFQ VNWAL+RCT+PP +P 
Sbjct: 475 FPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCTSPPQIPQ 534

Query: 231 P 231
           P
Sbjct: 535 P 535

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1

 Score =  246 bits (627), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/243 (53%), Positives = 160/243 (65%), Gaps = 21/243 (8%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           MLGI+YRDLKPENVLVR DGHIML+DFDLSL+C  S S   + S  N  +    + Y V 
Sbjct: 347 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC--SVSPTLVKSSNN--LQTKSSGYCV- 401

Query: 61  HPPFTSASCII-PNCIVPAVSCFRPK---------RKRKKKTGQHSG----PEFVVEPVD 106
            P     +C++ P+CI P  SCF P+         +K K K   H+     PE + EP +
Sbjct: 402 QPSCIEPTCVMQPDCIKP--SCFTPRFLSGKSKKDKKSKPKNDMHNQVTPLPELIAEPTN 459

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
            RSMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N++ 
Sbjct: 460 ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVIG 519

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPP 226
           + L FP+ P V   A+DLI  LL K+P+ RL   +GA+ IK HPFFQ VNWAL+RC TPP
Sbjct: 520 QPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCATPP 579

Query: 227 FVP 229
            VP
Sbjct: 580 EVP 582

Phaseolus vulgaris (taxid: 3885)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q64FQ2|PID2_ARATH Protein kinase PINOID 2 OS=Arabidopsis thaliana GN=PID2 PE=1 SV=1

 Score =  220 bits (561), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/283 (43%), Positives = 155/283 (54%), Gaps = 61/283 (21%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVL+R DGH+ML+DFDLS KCD      Q +SD +      ++    D
Sbjct: 207 MMGIVYRDLKPENVLIREDGHVMLSDFDLSFKCD---VVPQFLSDNDRDRGHQED----D 259

Query: 61  HPPFTSASCIIPNCIV----PAVSCFRPKRKRKKK-----TGQHSG-------------- 97
                   C  P+C      P +SCF P   R++K     T  H                
Sbjct: 260 DDISIRRKCSTPSCTTTPLNPVISCFSPTSSRRRKKNVVTTTIHENAAGTSDSVKSNDVS 319

Query: 98  ------------------------PEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPV 133
                                   P    EP++ RS SFVGTHEYLAPE++SG+GHGS V
Sbjct: 320 RTFSRSPSSCSRVSNGLRDISGGCPSIFAEPINARSKSFVGTHEYLAPEVISGQGHGSAV 379

Query: 134 DWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF-------PKEPAVPATAKDLIS 186
           DWWT GIFL+E+ +G TPF+G ++E TL NI+   L F       PKE      A+DLI 
Sbjct: 380 DWWTYGIFLYEMIFGRTPFKGDNNEKTLVNILKAPLTFPKVIVNSPKEYEDMVNAQDLII 439

Query: 187 QLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
           +LL K+P++RLGS KG+  IK H FF+GVNWAL+R   PP+VP
Sbjct: 440 KLLVKNPKKRLGSLKGSIEIKRHEFFEGVNWALIRSIKPPWVP 482

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Plays a minor role in the regulation of cellular auxin efflux and cotyledon organogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2QM77|PID_ORYSJ Protein kinase PINOID OS=Oryza sativa subsp. japonica GN=PID PE=2 SV=1

 Score =  220 bits (561), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 118/233 (50%), Positives = 144/233 (61%), Gaps = 27/233 (11%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVL+R+DGHIMLTDFDLSL+   S S              L  +   D
Sbjct: 235 MMGIVYRDLKPENVLIRADGHIMLTDFDLSLQSTTSPS--------------LDGDTDTD 280

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
                 ASC  P+ ++        + KR++       P FV EPVD RS SFVGTHEY+A
Sbjct: 281 DEASGGASCF-PDHLL--------RFKRRRNAVAAPRPRFVAEPVDARSCSFVGTHEYVA 331

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPA---- 176
           PE+ SG  HG+ VDWW  G+FL+EL YG TPF G  +E TL NIV R L FP        
Sbjct: 332 PEVASGGAHGAAVDWWAYGVFLYELIYGRTPFAGATNEATLRNIVRRPLAFPSGSGSCGP 391

Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
             A A+DLI++LLAKDP  RLGS +GA+ +K HPFF+ +N ALLR + PP VP
Sbjct: 392 ADADARDLIARLLAKDPAARLGSRRGAADVKSHPFFKSLNLALLRSSRPPVVP 444

Serine/threonine-protein kinase involved in the regulation of auxin signaling. May control polar auxin transport and probably plays a role in the pattern formation and organogenesis in the rice shoot.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64682|PID_ARATH Protein kinase PINOID OS=Arabidopsis thaliana GN=PID PE=1 SV=1

 Score =  211 bits (536), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 116/235 (49%), Positives = 147/235 (62%), Gaps = 27/235 (11%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           MLGI+YRDLKPEN+LVRSDGHIML+DFDLSL C DS   A + S  + P    +N+ L  
Sbjct: 198 MLGIIYRDLKPENILVRSDGHIMLSDFDLSL-CSDSI--AAVESSSSSP----ENQQLRS 250

Query: 61  HPPFTSASCIIPNCI-VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
              FT  + +    +    V    P R             FV EPV  RS SFVGTHEY+
Sbjct: 251 PRRFTRLARLFQRVLRSKKVQTLEPTRL------------FVAEPVTARSGSFVGTHEYV 298

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPA 179
           APE+ SG  HG+ VDWW  G+FL+E+ YG TPF    +++ L NIV R L FP +   PA
Sbjct: 299 APEVASGGSHGNAVDWWAFGVFLYEMIYGKTPFVAPTNDVILRNIVKRQLSFPTDS--PA 356

Query: 180 T-----AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
           T     A++LIS LL KDP +RLGS +GA+ +K HPFF+G+N+AL+R  TPP +P
Sbjct: 357 TMFELHARNLISGLLNKDPTKRLGSRRGAAEVKVHPFFKGLNFALIRTLTPPEIP 411

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Acts as a positive regulator of cellular auxin efflux and regulates organ development by enhancing polar auxin transport. Phosphorylates conserved serine residues in the PIN auxin efflux carriers. Phosphorylation of PIN proteins is required and sufficient for apical-basal PIN polarity that enables directional intercellular auxin fluxes, which mediate differential growth, tissue patterning and organogenesis. Acts in association with PIN1 to control the establishment of bilateral symmetry and promotion of cotyledon outgrowth. Regulates root gravitropism through modulation of PIN2-dependent basipetal auxin transport. Required for polarization of PIN3-dependent auxin transport for hypocotyl gravitropic response. The protein kinase activity of PID is essential for its auxin efflux regulatory function. PID kinase and PP2A phosphatase activities antagonistically regulate phosphorylation of PIN proteins, affecting PIN sorting.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q94E49|PID2_ORYSJ Protein kinase PINOID 2 OS=Oryza sativa subsp. japonica GN=PID2 PE=2 SV=1

 Score =  201 bits (512), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/254 (46%), Positives = 153/254 (60%), Gaps = 43/254 (16%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+G+VYRDLKPENVLVR DGHIML+DFDLSLKCD       ++     P    ++     
Sbjct: 209 MMGVVYRDLKPENVLVRGDGHIMLSDFDLSLKCD-------VVPKLLRPA---RSAAAGG 258

Query: 61  HPPFTSASCIIPNCIVPAVSC-FRPKRK------------------------RKKKTGQH 95
            PP    S  +P  I P +SC FR   K                         + +T   
Sbjct: 259 KPPLPPPSSCVPPTIQPVLSCIFRGVHKCHHAKECAGGGAAAGNNGDGDGNDEEAETETA 318

Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
                VVEPV  RS SFVGTHEYLAPE++SG+GHGS VDWWTLG+F++E+ YG TPF+G 
Sbjct: 319 EPEVVVVEPVAARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFMYEMLYGRTPFKGE 378

Query: 156 DHELTLANIVARALEFPK--------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIK 207
            +E TL NI+ + + FP+        E     TA+DL+ QLLAK+P++RLGST G++ +K
Sbjct: 379 SNEKTLINIIKQPVTFPRLAGAAAAGEWEEMKTAQDLMLQLLAKNPKKRLGSTMGSAEVK 438

Query: 208 HHPFFQGVNWALLR 221
            HPFF+GVNWAL+R
Sbjct: 439 RHPFFKGVNWALVR 452

Serine/threonine-protein kinase involved in the regulation of auxin signaling.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 130/232 (56%), Gaps = 42/232 (18%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           LGIVYRDLKPEN+L++ DGHI+L DFDLS                               
Sbjct: 696 LGIVYRDLKPENILLKKDGHIVLADFDLSF------------------------------ 725

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
                 +   P  I+PA     P ++R+ K+     P FV EP   +S SFVGT EY+AP
Sbjct: 726 -----MTTCTPQLIIPAA----PSKRRRSKS--QPLPTFVAEP-STQSNSFVGTEEYIAP 773

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATA 181
           EI++G GH S +DWW LGI L+E+ YG TPFRG + + T ANI+ + L FP    V    
Sbjct: 774 EIITGAGHTSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLVG 833

Query: 182 KDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN 233
           + LI+ LL +DP  RLGS  GA+ IK H FF+G+NW L+R  +PP +  P +
Sbjct: 834 RQLINTLLNRDPSSRLGSKGGANEIKQHAFFRGINWPLIRGMSPPPLDAPLS 885

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for photo-induced movements. Mediates calcium spiking of extra- and intracellular origins in response to blue light. Involved in hypocotyl phototropism. Contributes to the chloroplast accumulation in low blue light and mediates their translocation (avoidance response) at high fluence. Regulates stomata opening and photomorphogenesis response of leaf tissue. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
255576359	441	serine/threonine protein kinase, putativ	1.0	0.566	0.868	1e-127
224132032	439	predicted protein [Populus trichocarpa]	1.0	0.569	0.864	1e-121
224103043	440	predicted protein [Populus trichocarpa]	1.0	0.568	0.832	1e-117
147864073	450	hypothetical protein VITISV_002764 [Viti	1.0	0.555	0.856	1e-113
359479468	436	PREDICTED: serine/threonine-protein kina	1.0	0.573	0.856	1e-113
449496268	451	PREDICTED: protein kinase G11A-like [Cuc	1.0	0.554	0.793	1e-110
449456110	451	PREDICTED: protein kinase G11A-like [Cuc	1.0	0.554	0.793	1e-110
356543562	453	PREDICTED: protein kinase G11A-like [Gly	0.984	0.543	0.785	1e-107
30692190	451	protein kinase family protein [Arabidops	1.0	0.554	0.764	1e-104
110739125	451	protein kinase like protein [Arabidopsis	1.0	0.554	0.764	1e-104

>gi|255576359|ref|XP_002529072.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223531484|gb|EEF33316.1| serine/threonine protein kinase, putative [Ricinus communis]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/250 (86%), Positives = 230/250 (92%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS S  QII+ QN P A  +N+Y +D
Sbjct: 192 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIITSQNTPNAAPKNDYPID 251

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
           H PFTS+SCIIPNCIVPAVSCF PKRKRKKKTG   GPEFV EPVDVRSMSFVGTHEYLA
Sbjct: 252 HRPFTSSSCIIPNCIVPAVSCFHPKRKRKKKTGHRGGPEFVAEPVDVRSMSFVGTHEYLA 311

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PEIVSGEGHGSPVDWWTLGIF+FELFYGVTPFRG+DHELTLANIVARALEFPKEPA+P+T
Sbjct: 312 PEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGLDHELTLANIVARALEFPKEPAIPST 371

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
           AKDLISQLL KDP RRLGST GASAIKHHPFFQGVNWALLRCT PP+VPPP+ +E+VSDE
Sbjct: 372 AKDLISQLLVKDPARRLGSTMGASAIKHHPFFQGVNWALLRCTRPPYVPPPYTKEIVSDE 431

Query: 241 SCPETPVEYY 250
           SCPETPVEYY
Sbjct: 432 SCPETPVEYY 441

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132032|ref|XP_002328168.1| predicted protein [Populus trichocarpa] gi|222837683|gb|EEE76048.1| predicted protein [Populus trichocarpa]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/250 (86%), Positives = 229/250 (91%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS S  QIISD+N   A  +N+YLV+
Sbjct: 190 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIISDKNHAAAAPKNDYLVE 249

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
           HP +TS+SCIIPNCIVPAVSCF P+RKRKKK G   GPEFV EPVDVRSMSFVGTHEYLA
Sbjct: 250 HPRYTSSSCIIPNCIVPAVSCFHPRRKRKKKMGNRGGPEFVAEPVDVRSMSFVGTHEYLA 309

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PEIVSGEGHGSPVDWWTLGIF+FELFYGVTPFRGVDHELTLANIVARALEFPKEP VPAT
Sbjct: 310 PEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDHELTLANIVARALEFPKEPVVPAT 369

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
           AKDLISQLL KDP RR+GST GASA+KHHPFFQGVNWALLRCT PP+VPPPFN E+VSDE
Sbjct: 370 AKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPPFNTEVVSDE 429

Query: 241 SCPETPVEYY 250
           SCPETPVEYY
Sbjct: 430 SCPETPVEYY 439

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103043|ref|XP_002312901.1| predicted protein [Populus trichocarpa] gi|222849309|gb|EEE86856.1| predicted protein [Populus trichocarpa]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 208/250 (83%), Positives = 225/250 (90%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS S  QIISD+    A  +N+YL +
Sbjct: 191 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIISDKIDAAAAPKNDYLFE 250

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
           HP +TS+SCI+PNCIVPAVSCF P+RKRKKK G   GPEFV EPVDVRSMSFVGTHEYLA
Sbjct: 251 HPSYTSSSCILPNCIVPAVSCFHPRRKRKKKMGNRGGPEFVAEPVDVRSMSFVGTHEYLA 310

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PEIVSGEGHGSPVDWWTLGIF+FELFYG TPFRGVDHELTLAN+VARALEFPKEP VPAT
Sbjct: 311 PEIVSGEGHGSPVDWWTLGIFMFELFYGYTPFRGVDHELTLANVVARALEFPKEPVVPAT 370

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
           AKDL+SQLL KDP RR+GS  GASA+KHHPFFQGVNWALLRC  PP+VPPPF+RE+VSDE
Sbjct: 371 AKDLVSQLLVKDPARRMGSPMGASAVKHHPFFQGVNWALLRCRPPPYVPPPFSREVVSDE 430

Query: 241 SCPETPVEYY 250
           SCPETPVEYY
Sbjct: 431 SCPETPVEYY 440

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864073|emb|CAN83229.1| hypothetical protein VITISV_002764 [Vitis vinifera]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/250 (85%), Positives = 229/250 (91%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD S S AQIISDQNPP+A+  ++Y  D
Sbjct: 201 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDHSTSVAQIISDQNPPLALPPSDYPAD 260

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
            PPFTS+SCI+PNCIVPAVSCF PKRKRKKK G H GPEFV EPVDVRSMSFVGTHEYLA
Sbjct: 261 PPPFTSSSCILPNCIVPAVSCFHPKRKRKKKPGHHGGPEFVAEPVDVRSMSFVGTHEYLA 320

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PEIVSGEGHGS VDWWTLGIF+FEL YGVTPFRGVD+ELTLANIVARALEFPKEP VPAT
Sbjct: 321 PEIVSGEGHGSAVDWWTLGIFIFELLYGVTPFRGVDNELTLANIVARALEFPKEPLVPAT 380

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
            KDLISQLL KDP RR+GST GASAIKHHPFFQGVNWALLRCT PPF+PPPFNR++VSDE
Sbjct: 381 TKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPFNRDVVSDE 440

Query: 241 SCPETPVEYY 250
           SCPETP++YY
Sbjct: 441 SCPETPMDYY 450

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479468|ref|XP_002266280.2| PREDICTED: serine/threonine-protein kinase KIPK-like [Vitis vinifera]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 214/250 (85%), Positives = 229/250 (91%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD S S AQIISDQNPP+A+  ++Y  D
Sbjct: 187 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDHSTSVAQIISDQNPPLALPPSDYPAD 246

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
            PPFTS+SCI+PNCIVPAVSCF PKRKRKKK G H GPEFV EPVDVRSMSFVGTHEYLA
Sbjct: 247 PPPFTSSSCILPNCIVPAVSCFHPKRKRKKKPGHHGGPEFVAEPVDVRSMSFVGTHEYLA 306

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PEIVSGEGHGS VDWWTLGIF+FEL YGVTPFRGVD+ELTLANIVARALEFPKEP VPAT
Sbjct: 307 PEIVSGEGHGSAVDWWTLGIFIFELLYGVTPFRGVDNELTLANIVARALEFPKEPLVPAT 366

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
            KDLISQLL KDP RR+GST GASAIKHHPFFQGVNWALLRCT PPF+PPPFNR++VSDE
Sbjct: 367 TKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPFNRDVVSDE 426

Query: 241 SCPETPVEYY 250
           SCPETP++YY
Sbjct: 427 SCPETPMDYY 436

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449496268|ref|XP_004160089.1| PREDICTED: protein kinase G11A-like [Cucumis sativus]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/252 (79%), Positives = 223/252 (88%), Gaps = 2/252 (0%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVL-QNEYLV 59
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKC++S +  Q+I+ +NP        +Y +
Sbjct: 200 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEESTATPQVINAKNPMNGTAPLKDYQI 259

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
           D PPFTS+SCI+PNCIVPAVSCF PKRKRKKK+G  +GPEFV EPVDVRSMSFVGTHEYL
Sbjct: 260 DAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYL 319

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPA 179
           APEIVSGEGHGS VDWWTLG+F+FELFYGVTPFRG+D+ELTLANIVARALEFPKEPAVP 
Sbjct: 320 APEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPT 379

Query: 180 TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE-LVS 238
            AKDLISQLL KDP RRLGST G+SAIKHH FFQGVNWALLRCT+PPF+PPPF+RE + S
Sbjct: 380 AAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIAS 439

Query: 239 DESCPETPVEYY 250
           DESC E PV+YY
Sbjct: 440 DESCTEAPVDYY 451

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456110|ref|XP_004145793.1| PREDICTED: protein kinase G11A-like [Cucumis sativus]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 200/252 (79%), Positives = 223/252 (88%), Gaps = 2/252 (0%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVL-QNEYLV 59
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKC++S +  Q+I+ +NP        +Y +
Sbjct: 200 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEESTATPQVINAKNPMNGTAPLKDYQI 259

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
           D PPFTS+SCI+PNCIVPAVSCF PKRKRKKK+G  +GPEFV EPVDVRSMSFVGTHEYL
Sbjct: 260 DAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYL 319

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPA 179
           APEIVSGEGHGS VDWWTLG+F+FELFYGVTPFRG+D+ELTLANIVARALEFPKEPAVP 
Sbjct: 320 APEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPT 379

Query: 180 TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE-LVS 238
            AKDLISQLL KDP RRLGST G+SAIKHH FFQGVNWALLRCT+PPF+PPPF+RE + S
Sbjct: 380 AAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIAS 439

Query: 239 DESCPETPVEYY 250
           DESC E PV+YY
Sbjct: 440 DESCTEAPVDYY 451

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543562|ref|XP_003540229.1| PREDICTED: protein kinase G11A-like [Glycine max]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 220/257 (85%), Gaps = 11/257 (4%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQ-NPPIAVLQNEYLV 59
           M+GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS S  QII DQ N P      +  V
Sbjct: 201 MMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTSTPQIILDQKNTP----HKDPRV 256

Query: 60  D--HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHE 117
           D     FTS+SCI+P+CIVPAVSCF PKRKRKKK  QH+GPEFV EP+DVRSMSFVGTHE
Sbjct: 257 DPSQSQFTSSSCILPSCIVPAVSCFHPKRKRKKKQAQHNGPEFVAEPIDVRSMSFVGTHE 316

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAV 177
           YLAPEIVSGEGHGS VDWWTLGIF+FELFYGVTPFRG+D+ELTLANIVARALEFPKEP+V
Sbjct: 317 YLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPSV 376

Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELV 237
           P TAKDLISQLL KDP RRLGST GAS+IKHHPFFQGVNWALLRCT PPFVPP + +E V
Sbjct: 377 PPTAKDLISQLLVKDPSRRLGSTMGASSIKHHPFFQGVNWALLRCTPPPFVPPHYIKEAV 436

Query: 238 SD----ESCPETPVEYY 250
           S     E+CP+TP++YY
Sbjct: 437 SSHHEIETCPQTPIDYY 453

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30692190|ref|NP_190047.2| protein kinase family protein [Arabidopsis thaliana] gi|111074458|gb|ABH04602.1| At3g44610 [Arabidopsis thaliana] gi|332644400|gb|AEE77921.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/255 (76%), Positives = 221/255 (86%), Gaps = 5/255 (1%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQN--PPIAVLQNEYL 58
           MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD+S S  QI+ ++N  P  +  QNE  
Sbjct: 197 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTSTPQIVLNRNNLPNGSSDQNENQ 256

Query: 59  -VDHPPFTSASCIIPNCIVPAVSCFRPK-RKRKKKTG-QHSGPEFVVEPVDVRSMSFVGT 115
            +DH   TS+SC+IPNCIVPAVSCF P+ R+RKKKT  +++GPE V EPVDVRSMSFVGT
Sbjct: 257 GMDHRQTTSSSCMIPNCIVPAVSCFHPRIRRRKKKTDHRNNGPELVAEPVDVRSMSFVGT 316

Query: 116 HEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           HEYLAPEIVSGEGHGS VDWWTLGIF+FELFYG TPF+G+DHELTLANIVARALEFPKEP
Sbjct: 317 HEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGTTPFKGMDHELTLANIVARALEFPKEP 376

Query: 176 AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
            +P+ AKDLISQLLAKDP RRLGS+ GA+A+K HPFFQGVNWALL CT PPF+PPPF +E
Sbjct: 377 TIPSAAKDLISQLLAKDPSRRLGSSLGATAVKRHPFFQGVNWALLMCTRPPFLPPPFRKE 436

Query: 236 LVSDESCPETPVEYY 250
           L+SD+ CPET V+YY
Sbjct: 437 LLSDDICPETHVDYY 451

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110739125|dbj|BAF01479.1| protein kinase like protein [Arabidopsis thaliana]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/255 (76%), Positives = 221/255 (86%), Gaps = 5/255 (1%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQN--PPIAVLQNEYL 58
           MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD+S S  QI+ ++N  P  +  QNE  
Sbjct: 197 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTSTPQIVLNRNNLPNGSSDQNENQ 256

Query: 59  -VDHPPFTSASCIIPNCIVPAVSCFRPK-RKRKKKTG-QHSGPEFVVEPVDVRSMSFVGT 115
            +DH   TS+SC+IPNCIVPAVSCF P+ R+RKKKT  +++GPE V EPVDVRSMSFVGT
Sbjct: 257 GMDHRQTTSSSCMIPNCIVPAVSCFHPRIRRRKKKTDHRNNGPELVAEPVDVRSMSFVGT 316

Query: 116 HEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           HEYLAPEIVSGEGHGS VDWWTLGIF+FELFYG TPF+G+DHELTLANIVARALEFPKEP
Sbjct: 317 HEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGTTPFKGMDHELTLANIVARALEFPKEP 376

Query: 176 AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
            +P+ AKDLISQLLAKDP RRLGS+ GA+A+K HPFFQGVNWALL CT PPF+PPPF +E
Sbjct: 377 TIPSAAKDLISQLLAKDPSRRLGSSLGATAVKRHPFFQGVNWALLMCTRPPFLPPPFRKE 436

Query: 236 LVSDESCPETPVEYY 250
           L+SD+ CPET V+YY
Sbjct: 437 LLSDDICPETHVDYY 451

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2098120	451	AT3G44610 [Arabidopsis thalian	1.0	0.554	0.764	5.3e-104
TAIR|locus:2160922	586	D6PKL2 "D6 protein kinase like	0.924	0.394	0.548	3.6e-66
TAIR|locus:2091443	578	ATPK7 [Arabidopsis thaliana (t	0.904	0.391	0.539	1.1e-64
TAIR|locus:2055017	765	AT2G44830 [Arabidopsis thalian	0.92	0.300	0.555	1.8e-62
TAIR|locus:2133837	506	D6PKL1 "D6 protein kinase like	0.932	0.460	0.511	1.8e-62
TAIR|locus:2178388	498	D6PK "D6 protein kinase" [Arab	0.924	0.463	0.529	2.3e-62
TAIR|locus:2087785	577	AGC1.5 "AGC kinase 1.5" [Arabi	0.896	0.388	0.532	3e-62
TAIR|locus:2049485	949	AT2G36350 [Arabidopsis thalian	0.94	0.247	0.511	3.5e-62
UNIPROTKB|Q5I6E9	700	Adi3 "AvrPto-dependent Pto-int	0.888	0.317	0.547	3.8e-62
TAIR|locus:2085191	934	KIPK "KCBP-interacting protein	0.9	0.240	0.538	4.9e-62

TAIR|locus:2098120 AT3G44610 [Arabidopsis thaliana (taxid:3702)]

 Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
 Identities = 195/255 (76%), Positives = 221/255 (86%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQN--PPIAVLQNEYL 58
             MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD+S S  QI+ ++N  P  +  QNE  
Sbjct:   197 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDESTSTPQIVLNRNNLPNGSSDQNENQ 256

Query:    59 -VDHPPFTSASCIIPNCIVPAVSCFRPK-RKRKKKTG-QHSGPEFVVEPVDVRSMSFVGT 115
              +DH   TS+SC+IPNCIVPAVSCF P+ R+RKKKT  +++GPE V EPVDVRSMSFVGT
Sbjct:   257 GMDHRQTTSSSCMIPNCIVPAVSCFHPRIRRRKKKTDHRNNGPELVAEPVDVRSMSFVGT 316

Query:   116 HEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEP 175
             HEYLAPEIVSGEGHGS VDWWTLGIF+FELFYG TPF+G+DHELTLANIVARALEFPKEP
Sbjct:   317 HEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGTTPFKGMDHELTLANIVARALEFPKEP 376

Query:   176 AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
              +P+ AKDLISQLLAKDP RRLGS+ GA+A+K HPFFQGVNWALL CT PPF+PPPF +E
Sbjct:   377 TIPSAAKDLISQLLAKDPSRRLGSSLGATAVKRHPFFQGVNWALLMCTRPPFLPPPFRKE 436

Query:   236 LVSDESCPETPVEYY 250
             L+SD+ CPET V+YY
Sbjct:   437 LLSDDICPETHVDYY 451

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2160922 D6PKL2 "D6 protein kinase like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 135/246 (54%), Positives = 165/246 (67%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
             MLGIVYRDLKPENVLVR DGHIML+DFDLSL+C  S +  +  + ++ P+   +N Y V 
Sbjct:   309 MLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCLVSPTLVKSAAIESDPLR--KNVYCVQ 366

Query:    61 HPPFTSASCIIPNCIVPAVSCFRPK---------RKRKKKTGQHSGP--EFVVEPVDVRS 109
              P     SCI P+C VP  +CF P+         RK K  T     P  E V EP D RS
Sbjct:   367 -PACIEPSCIQPSCTVPT-TCFSPRLFSSKSKKDRKPKNDTANQVRPLPELVAEPTDARS 424

Query:   110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
             MSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N+V + L
Sbjct:   425 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRQTLFNVVGQPL 484

Query:   170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
              FP+ P V   A+DLI  LL K+P++RLG  +GA+ +K HPFF+GVNWAL+RC TPP +P
Sbjct:   485 RFPETPVVSFAARDLIRGLLMKEPQQRLGFKRGATEVKQHPFFEGVNWALIRCATPPEIP 544

Query:   230 PPFNRE 235
              P   E
Sbjct:   545 KPVELE 550

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

TAIR|locus:2091443 ATPK7 [Arabidopsis thaliana (taxid:3702)]

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 130/241 (53%), Positives = 161/241 (66%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
             MLGI+YRDLKPENVLVR DGHIML+DFDLSL+C   A +  ++      +    + Y + 
Sbjct:   300 MLGIIYRDLKPENVLVREDGHIMLSDFDLSLRC---AVSPTLVRFAAITLESKSSSYCIQ 356

Query:    61 HPPFTSASCII-PNCIVPAVSCFRP----KRKRKKKTGQHSG-----PEFVVEPVDVRSM 110
                   +SCI+ P+CI P   CF P    K K +KK+   S      PE + EP   RSM
Sbjct:   357 PTCVDQSSCIVQPDCIQPV--CFTPRFLSKGKHRKKSNDMSRQIRPLPELIAEPTSARSM 414

Query:   111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             SFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G+TPFRG D+  TL N+V + L 
Sbjct:   415 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGITPFRGGDNRATLFNVVGQPLR 474

Query:   171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
             FP+ P V   A+DLI  LL K+P+ RL   +GA+ IK HPFFQ VNWAL+RCT+PP +P 
Sbjct:   475 FPEHPNVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCTSPPQIPQ 534

Query:   231 P 231
             P
Sbjct:   535 P 535

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2055017 AT2G44830 [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 136/245 (55%), Positives = 163/245 (66%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQII-SDQNPPIAVLQNEYLV 59
             MLG+VYRDLKPENVLVR DGHIML+DFDLSL+C  S +  +   SD +   A       +
Sbjct:   481 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTFDSDPSRRGAFCVQPACM 540

Query:    60 DHPPFTSASCIIPNCIVPAVSCFRPKRKRKK--KTG-----QHSG--PEFVVEPVDVRSM 110
             +  P TSA  I P+C +P  S F  K K+ K  KT       HSG  PE V EP + RSM
Sbjct:   541 E--P-TSACIIQPSCFLPR-SIFPNKNKKNKSRKTQADFFKSHSGSLPELVAEP-NTRSM 595

Query:   111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             SFVGTHEYLAPEI+ GEGHGS VDWWT GIF+ EL YG TPF+G  +  TL N+V   L+
Sbjct:   596 SFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFVHELLYGKTPFKGSGNRATLFNVVGEQLK 655

Query:   171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
             FP+ PA     +DLI  LL KDP+ RLG+ +GA+ IK HPFF+GVNWAL+RC+TPP VP 
Sbjct:   656 FPESPATSYAGRDLIQALLVKDPKNRLGTKRGATEIKQHPFFEGVNWALIRCSTPPEVPR 715

Query:   231 PFNRE 235
                 E
Sbjct:   716 QMETE 720

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2133837 D6PKL1 "D6 protein kinase like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 132/258 (51%), Positives = 164/258 (63%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
             MLGI+YRDLKPENVLVR DGH+ML+DFDLSL+C  S +   ++        VL +E   +
Sbjct:   241 MLGIIYRDLKPENVLVRDDGHVMLSDFDLSLRCTVSPT---VVRS-----TVLASEGQKN 292

Query:    61 HPPFTSASCII-PNCIVPAVSCFRP-----KRKRKKKTGQHSG------PEFVVEPVDVR 108
                    +CI  P+CI    +CF P     K K+ KK    +G      PE V EP   R
Sbjct:   293 SGYCAQPACIQQPSCISAPTTCFSPRYFSSKSKKDKKMKNETGNQVSPLPELVAEPTSAR 352

Query:   109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
             SMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N+V + 
Sbjct:   353 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQP 412

Query:   169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFV 228
             L FP+ P V   A+DLI  LL K+P+ RL   +GA+ +K HPFF+GVNWAL+RC +PP +
Sbjct:   413 LRFPESPVVSFAARDLIRSLLVKEPQHRLAYKRGATEMKQHPFFEGVNWALVRCASPPEI 472

Query:   229 PPPFNRELVSDESCPETP 246
             P P     V  ES P TP
Sbjct:   473 PKP-----VDYESAPATP 485

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2178388 D6PK "D6 protein kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 134/253 (52%), Positives = 164/253 (64%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVL-QNEYLV 59
             MLGI+YRDLKPENVLVR DGH+ML+DFDLSL+C  S S   I+   N     L +N    
Sbjct:   227 MLGIIYRDLKPENVLVRDDGHVMLSDFDLSLRCTVSLS---IVRSANVGSEGLSKNSVSC 283

Query:    60 DHPPFTSASCII-PNCIVPA-VSCFRP-------KRKRKKKT--GQHSG---PEFVVEPV 105
                P    +CI  P+CI  A  SCF P       K+ +K KT  G H     PE V EP 
Sbjct:   284 SQQP----ACIQQPSCISMAPTSCFGPRFFSSKSKKDKKPKTENGNHQVTPLPELVAEPT 339

Query:   106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
               RSMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N+V
Sbjct:   340 GARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVV 399

Query:   166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
              + L FP+ P V   A+DLI  LL K+P+ RL   +GA+ IK HPFF+GVNWAL+RC +P
Sbjct:   400 GQPLRFPESPVVSFAARDLIRSLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASP 459

Query:   226 PFVPPPFNRELVS 238
             P +P P + E ++
Sbjct:   460 PEIPKPVDLEALN 472

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009925 "basal plasma membrane" evidence=IDA

GO:0010540 "basipetal auxin transport" evidence=IGI

GO:0032880 "regulation of protein localization" evidence=RCA

TAIR|locus:2087785 AGC1.5 "AGC kinase 1.5" [Arabidopsis thaliana (taxid:3702)]

 Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
 Identities = 124/233 (53%), Positives = 159/233 (68%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
             MLG+VYRDLKPEN+LVR +GHIML+DFDLSL+C  + +  +  S  +   A+L  E+ V+
Sbjct:   303 MLGVVYRDLKPENILVRDEGHIMLSDFDLSLRCTFNPTLVKSSSVCSGGGAILNEEFAVN 362

Query:    61 HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQH--SGPEFVVEPVDVRSMSFVGTHEY 118
                     C+ P+  +P +   +  RK K  +G    S PE + EP DVRSMSFVGTHEY
Sbjct:   363 -------GCMHPSAFLPRLLPSKKTRKAKSDSGLGGLSMPELMAEPTDVRSMSFVGTHEY 415

Query:   119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVP 178
             LAPEI+ GEGHGS VDWWT GIFL+EL +G TPF+G  +  TL N+V + L+FP  P V 
Sbjct:   416 LAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGNRATLHNVVGQPLKFPDTPHVS 475

Query:   179 ATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
             + A+DLI  LL KDP RR+  T+GA+ IK HPFF+GVNWAL+R   PP +P P
Sbjct:   476 SAARDLIRGLLVKDPHRRIAYTRGATEIKQHPFFEGVNWALVRSAAPPHIPDP 528

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009860 "pollen tube growth" evidence=IGI;RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2049485 AT2G36350 [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 3.5e-62, P = 3.5e-62
 Identities = 134/262 (51%), Positives = 170/262 (64%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPI---AVLQNEY 57
             MLG++YRDLKPEN+LVR DGHIMLTDFDLSL+C   A N  ++   +PP    A +   Y
Sbjct:   677 MLGVIYRDLKPENILVREDGHIMLTDFDLSLRC---AVNPTLLRSTSPPEKDPARMSGPY 733

Query:    58 LVDHPPFTSASCIIPNCIVPAVSCFRPK---------RKRKKK-----TGQ-HSGPEFVV 102
                +       CI P+C VP   CF P+         + RK K     T Q  S P+ V 
Sbjct:   734 STSN--CIQPLCIEPSCRVP---CFSPRLLSTQARNQKPRKPKRPDLLTQQFRSLPQLVA 788

Query:   103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
             EP + RS SFVGTHEYLAPEI+ GEGHG+ VDWWT G+ L+EL YG TPF+G D+E TL+
Sbjct:   789 EPTEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYDNEETLS 848

Query:   163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC 222
             N+V + L+FP  P V   AK+LI +LL KDPE RLGS KGA+ IK HPFF+G+NWAL+RC
Sbjct:   849 NVVYQNLKFPDSPLVSFQAKELIRRLLVKDPESRLGSEKGAAEIKRHPFFEGLNWALIRC 908

Query:   223 TTPPFVPPPFNRELVSDESCPE 244
               PP +P  ++    ++ + PE
Sbjct:   909 AIPPELPDIYDNG-ATEATSPE 929

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0016246 "RNA interference" evidence=RCA

UNIPROTKB|Q5I6E9 Adi3 "AvrPto-dependent Pto-interacting protein 3" [Solanum lycopersicum (taxid:4081)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 133/243 (54%), Positives = 161/243 (66%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
             MLG+VYRDLKPENVLVR DGHIML+DFDLSL+C  S +  +I SD +P     +      
Sbjct:   426 MLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRISSD-DPS---KRGAAFCV 481

Query:    61 HPPFTSASCIIPNCIVPAVSCFRPK---RKRKKKTGQ---HSG------PEFVVEPVDVR 108
              P     +CI P  +    +CF P+   +K KKKT +    SG      PE V EP   R
Sbjct:   482 QP-----ACIEPTTVCMQPACFLPRLFPQKSKKKTPKPRADSGFQANSMPELVAEPTSAR 536

Query:   109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
             SMSFVGTHEYLAPEI+ GEGHGS VDWWT GIFL EL YG TPF+G  +  TL N+V + 
Sbjct:   537 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQ 596

Query:   169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFV 228
             L+FP  PA    ++DLI  LL K+P+ RLG  +GA+ IK HPFF+GVNWAL+RC+TPP V
Sbjct:   597 LKFPDSPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEV 656

Query:   229 PPP 231
             P P
Sbjct:   657 PRP 659

GO:0005515 "protein binding" evidence=IPI

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

TAIR|locus:2085191 KIPK "KCBP-interacting protein kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 637 (229.3 bits), Expect = 4.9e-62, P = 4.9e-62
 Identities = 132/245 (53%), Positives = 165/245 (67%)

Query:     1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPP---IAVLQNEY 57
             MLGI+YRDLKPEN+LVR DGHIMLTDFDLSL+C   A N  ++   +PP    A +   Y
Sbjct:   656 MLGIIYRDLKPENILVREDGHIMLTDFDLSLRC---AVNPTLVRSNSPPGKDPARISGPY 712

Query:    58 LVDH--PPF--TSASCIIPNCIVPAVSCFRPK-RKRKK-----KTGQH---SGPEFVVEP 104
                +   PF  T  SC + +C  P +S  + + RK K+     KT QH   S P+ V EP
Sbjct:   713 NTSNCIQPFCITEPSCQV-SCFSPRLSSNQQQGRKPKRGDHLSKTQQHLSRSLPQLVAEP 771

Query:   105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
              + RS SFVGTHEYLAPEI+ GEGHG+ VDWWT G+ L+EL YG TPF+G +++ TLAN+
Sbjct:   772 TEARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVLLYELLYGKTPFKGYNNDETLANV 831

Query:   165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT 224
             V + L+FP  P V   AKDLI  LL K+PE RLGS KG+  IK HPFF+G+NWAL+RC  
Sbjct:   832 VLQNLKFPDSPLVSFQAKDLIRGLLVKEPENRLGSEKGSVEIKRHPFFEGLNWALIRCAI 891

Query:   225 PPFVP 229
             PP +P
Sbjct:   892 PPELP 896

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0000278 "mitotic cell cycle" evidence=RCA

GO:0006396 "RNA processing" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.691

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.66.33.1 hypothetical protein (366 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	250
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	7e-94
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-49
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	9e-45
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-42
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-40
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-39
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-37
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-36
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-34
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-33
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-32
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-32
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-31
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-31
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-30
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-30
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-30
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-29
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	8e-29
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-29
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-28
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-28
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-27
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-27
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-27
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	6e-27
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	7e-27
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-26
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-26
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	5e-26
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-25
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-25
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-25
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-25
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-25
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-24
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-24
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-24
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-24
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-24
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	6e-24
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-23
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-23
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-23
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	6e-23
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	6e-23
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-22
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	6e-22
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-21
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-21
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-21
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-21
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-21
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	8e-21
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-21
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-20
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-20
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-20
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-20
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	8e-20
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-19
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-19
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-19
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-19
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	6e-19
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-18
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-18
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	7e-17
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-12
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-11
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	5e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-10
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-10
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-09
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-09
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-09
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	5e-09
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-08
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-08
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	5e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-07
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-07
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-07
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-07
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-07
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	5e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-07
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	8e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-06
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-06
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-06
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-05
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	3e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	7e-05
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	9e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-04
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	5e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	6e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	7e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	8e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	8e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	9e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	0.001
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.001
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.001
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.001
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.001
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.001
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.001
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	0.001
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.001
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.001
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.001
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.001
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.002
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.002
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	0.002
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	0.002
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	0.002
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.002
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.002
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.002
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.002
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.003
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.003
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.003
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	0.003
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.003
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.003
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.004
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.004
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.004
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.004
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	0.004
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	0.004
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.004

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  278 bits (712), Expect = 7e-94
 Identities = 105/231 (45%), Positives = 135/231 (58%), Gaps = 40/231 (17%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
           +LGIVYRDLKPEN+L+   GHIML+DFDLS + D                          
Sbjct: 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE------------------------ 156

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
            PP  S           A+     +             E   E    RS SFVGT EY+A
Sbjct: 157 -PPPVS----------KALRKGSRRSSVNSIP-----SETFSEEPSFRSNSFVGTEEYIA 200

Query: 121 PEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           PE++SG+GHGS VDWWTLGI L+E+ YG TPF+G + + T +NI+ + + FP  P V ++
Sbjct: 201 PEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSS 260

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
           A+DLI +LL KDP +RLGS +GA+ IK HPFF+GVNWAL+R TTPP +P P
Sbjct: 261 ARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP 311

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  164 bits (416), Expect = 8e-49
 Identities = 78/230 (33%), Positives = 111/230 (48%), Gaps = 46/230 (20%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           LG ++RD+KP+N+L+ +DGHI L DF L  K + +                         
Sbjct: 120 LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA-----------------------KD 156

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
             +              +   R  ++R+                 VR+ S VGT +Y+AP
Sbjct: 157 REYYLNDSHNLLFRDNVLVRRRDHKQRR-----------------VRANSTVGTPDYIAP 199

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAVPA 179
           E++ G  +G   DWW+LG+ L+E+ YG  PF     + T   I+    +L FP +P V  
Sbjct: 200 EVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSP 259

Query: 180 TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
            A DLI +LL  DPE RLGS +    IK HPFF+G++W  LR T PPFVP
Sbjct: 260 EAIDLICRLLC-DPEDRLGSFEE---IKSHPFFKGIDWENLRETKPPFVP 305

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  151 bits (383), Expect = 9e-45
 Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 51/211 (24%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
            GI++RDLKPEN+L+  D HI +TDF            A+++   + P +   +   +D 
Sbjct: 121 KGIIHRDLKPENILLDKDMHIKITDFG----------TAKVLDPNSSPESNKGDATNIDS 170

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
                                   R+R                      SFVGT EY++P
Sbjct: 171 QI-------------------EKNRRRFA--------------------SFVGTAEYVSP 191

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATA 181
           E+++ +  G   D W LG  ++++  G  PFRG +  LT   I+     FP  P  P  A
Sbjct: 192 ELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFP--PNFPPDA 249

Query: 182 KDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           KDLI +LL  DP+ RLG  +G   +K HPFF
Sbjct: 250 KDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  144 bits (365), Expect = 2e-42
 Identities = 51/107 (47%), Positives = 66/107 (61%), Gaps = 3/107 (2%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
             R+ +F GT EYLAPE++ G+G+G  VDWW+LG+ L+E+  G  PF   D +     I+
Sbjct: 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL 206

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
              L FP    +   A+DLIS LL KDP +RLGS  GA  IK HPFF
Sbjct: 207 KDPLRFP--EFLSPEARDLISGLLQKDPTKRLGSG-GAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  138 bits (351), Expect = 8e-40
 Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 5/130 (3%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+ +  GT EYLAPEI+  +G+G  VDWW LGI ++E+  G  PF   +       I
Sbjct: 151 VKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKI 210

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNW-ALL-R 221
           +   + FP        AKDLI  LL  D  +RLG+ K G + IK+HP+F G++W ALL R
Sbjct: 211 LEGKVRFPSF--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQR 268

Query: 222 CTTPPFVPPP 231
               PF+P  
Sbjct: 269 KIEAPFIPKV 278

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  139 bits (353), Expect = 2e-39
 Identities = 77/234 (32%), Positives = 114/234 (48%), Gaps = 34/234 (14%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSL---KCDDSASNAQII-SDQNPPIAVLQNEY 57
           LG ++RD+KP+N+L+   GHI L+DF LS    K  DSA   +++    N      +N  
Sbjct: 120 LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSV 179

Query: 58  LVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHE 117
            VD    T +S          ++ ++  R+                   + + S VGT +
Sbjct: 180 AVDSINLTMSS-------KDQIATWKKNRR-------------------LMAYSTVGTPD 213

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEP 175
           Y+APEI   +G+G   DWW+LG  +FE   G  PF   +   T   I+     L FP + 
Sbjct: 214 YIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI 273

Query: 176 AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
            +   A+DLI +L+  + E RLG   GA  IK HPFF+GV+W  +R    PF+P
Sbjct: 274 HLSVEAEDLIRRLIT-NAENRLGRG-GAHEIKSHPFFRGVDWDTIRQIRAPFIP 325

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  132 bits (334), Expect = 1e-37
 Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 1/106 (0%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
            VGT +Y+APE++ G+GH   VDWW+LG  L+E   G+ PF G   E    NI+   +E+
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW 220

Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
           P++  V   A DLIS+LL  DPE+RLG+ K    IK+HPFF+G++W
Sbjct: 221 PEDVEVSDEAIDLISKLLVPDPEKRLGA-KSIEEIKNHPFFKGIDW 265

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  129 bits (326), Expect = 3e-36
 Identities = 60/139 (43%), Positives = 82/139 (58%), Gaps = 12/139 (8%)

Query: 99  EFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVD 156
           EF+ E  + R+ SF GT EY+APE++ G   GH   VDWW+LG+  FEL  G +PF    
Sbjct: 154 EFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG 212

Query: 157 HELTLANIVARALEFPKEPAVPAT----AKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            + + + I  R L+   +P  P T    A+D I +LL KDP++RLG+  GA  IK+HPFF
Sbjct: 213 EQNSQSEISRRILK--SKPPFPKTMSAEARDFIQKLLEKDPKKRLGA-NGADEIKNHPFF 269

Query: 213 QGVNWALLRCTT--PPFVP 229
           QG++W  L       PF P
Sbjct: 270 QGIDWDDLAAKRIPAPFKP 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  126 bits (319), Expect = 1e-34
 Identities = 74/232 (31%), Positives = 108/232 (46%), Gaps = 39/232 (16%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSASNAQIISDQNPPIAVLQNEYLV 59
           LG ++RD+KP+N+L+ + GHI L+DF L   LK        +I+S   P      N    
Sbjct: 120 LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPS-----NFLDF 174

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
              P +S                  KR R+                   + S VGT +Y+
Sbjct: 175 ISKPMSSKRKAE-----------TWKRNRRAL-----------------AYSTVGTPDYI 206

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFPKEPAV 177
           APE+    G+    DWW+LG+ ++E+  G  PF   + + T   I+     L+FP E  +
Sbjct: 207 APEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPL 266

Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
              AKDLI +L   + ERRLG   G + IK HPFF+GV+W  +R    P +P
Sbjct: 267 SPEAKDLIKRLCC-EAERRLG-NNGVNEIKSHPFFKGVDWEHIRERPAPIIP 316

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  120 bits (303), Expect = 4e-33
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 7/115 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--LTLANIV 165
           ++ +F GT EY+APEI+  +G+   VD+W+LGI L+EL  G  PF   D +      +I+
Sbjct: 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL 207

Query: 166 AR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNW 217
                LEFP    +   AKDLI QLL ++PE RLG+ K G   IK H +F G +W
Sbjct: 208 KGNGKLEFPNY--IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  120 bits (301), Expect = 3e-32
 Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 8/145 (5%)

Query: 99  EFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDH 157
           EF+ E  + R+ SF GT EY+APEI+ G+ GHG  VDWW+LGI +FEL  G +PF     
Sbjct: 154 EFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGE 212

Query: 158 ELTLANIVARAL--EFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQG 214
             T + +  R L  + P    +   A+DL+ +LL KDP++RLG+  +GAS IK HPFF+G
Sbjct: 213 RNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272

Query: 215 VNWALLRCTTPPFVPPPFNRELVSD 239
           ++W  L       V PPF   + ++
Sbjct: 273 LDWEALALRK---VNPPFRPSIRNE 294

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  116 bits (294), Expect = 8e-32
 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 6/109 (5%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
             +  +FVGT EY+APE++ G+G+G  VD W+LG+ L+EL  G  PF G D  L L   +
Sbjct: 150 GEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKI 209

Query: 166 ARALE--FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            +      P E  +   AKDLI +LL KDPE+RL     A     HPFF
Sbjct: 210 GKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRL----TAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  117 bits (294), Expect = 2e-31
 Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 2/117 (1%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT EY+APE++  +G+G PVDWW +GI L+E   G  PF G   E     +++  +E+P+
Sbjct: 178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 237

Query: 174 -EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
            + A+PA A+DLIS+LL ++P  RLG T GA  +K H FF G++W  L      F+P
Sbjct: 238 GDEALPADAQDLISRLLRQNPLERLG-TGGAFEVKQHRFFLGLDWNGLLRQKAEFIP 293

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  117 bits (295), Expect = 2e-31
 Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            V + +F GT +Y+APEI+S + +G  VDWW LG+ L+E+  G +PF G D +    +I+
Sbjct: 150 GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL 209

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNWALL--RC 222
              + +P+  +    AK ++   L K+PE+RLG    G   IK HPFF+ ++W  L  + 
Sbjct: 210 EDEVRYPRWLSKE--AKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKE 267

Query: 223 TTPPFVPPPFNRELVSD 239
             PPF P    R  VS+
Sbjct: 268 IKPPFKPKIKGRFDVSN 284

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  114 bits (286), Expect = 2e-30
 Identities = 62/141 (43%), Positives = 81/141 (57%), Gaps = 13/141 (9%)

Query: 99  EFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVD 156
           EF  + V+ R+ SF GT EY+AP+IV G   GH   VDWW++G+ ++EL  G +PF    
Sbjct: 154 EFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG 212

Query: 157 HELTLANIVARALEFPKEPAVP----ATAKDLISQLLAKDPERRLGS-TKGASAIKHHPF 211
            + + A I  R L+   EP  P    A AKD+I +LL KDP++RLG     A  IK HPF
Sbjct: 213 EKNSQAEISRRILK--SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPF 270

Query: 212 FQGVNWALLRCTTPPFVPPPF 232
           FQ +NW  L       VP PF
Sbjct: 271 FQKINWDDLAAKK---VPAPF 288

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  114 bits (287), Expect = 3e-30
 Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 24/154 (15%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFEL------FYGVTPFRGVDHELTL 161
           R+ +  GT EYLAPE++  +GHG  VDWWT+G+ L+E       F+  TPFR        
Sbjct: 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IY 224

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASA-IKHHPFFQGVNWALL 220
             I+A  L+FP        A+DL+  LL  D  +RLG+ KG  A +K+HP+F G NW  L
Sbjct: 225 EKILAGRLKFPN--WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKL 282

Query: 221 RCTTPPFVPPPFNRELVSD------ESCPETPVE 248
                 + P P    + S       E  P++PV+
Sbjct: 283 ---YARYYPAPIPVRVKSPGDTSNFEKYPDSPVD 313

Length = 329

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  113 bits (284), Expect = 8e-30
 Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 8/146 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R+ +F GT E+LAPE+++   +   VDWW LG+ ++E+  G +PF G D E    +IV  
Sbjct: 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND 216

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWA--LLRCTT 224
            + +P+   +   A  ++ +LL ++PERRLGS  K A  +K  PFF+ +NW   L R   
Sbjct: 217 EVRYPR--FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIK 274

Query: 225 PPFVPPPFNRELVS---DESCPETPV 247
           PPFVP     E VS   +E   E PV
Sbjct: 275 PPFVPTIKGPEDVSNFDEEFTSEAPV 300

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  112 bits (281), Expect = 1e-29
 Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 6/133 (4%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           F  +  D R+ +  GT EYLAPE++  +GH   VDWW LGI ++E+  G  PF   +   
Sbjct: 147 FAKKLRD-RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG 205

Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNW- 217
               I+A  LEFP+   +   AKDLI +LL  D  RRLG+ K GA  +K+H +F+ V+W 
Sbjct: 206 IYEKILAGKLEFPRH--LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD 263

Query: 218 -ALLRCTTPPFVP 229
               R   PP VP
Sbjct: 264 DVPQRKLKPPIVP 276

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  110 bits (277), Expect = 8e-29
 Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 17/155 (10%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           +E     S +F GT EYLAPE++  + +   VDWW LG  L+E+ YG+ PF   D     
Sbjct: 147 IEHSKTTS-TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY 205

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL- 220
            NI+ + L     P +  +A+ L+  LL KD  +RLG+      IK+H FF  +NW  L 
Sbjct: 206 DNILNKPLRLK--PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLV 263

Query: 221 -RCTTPPFVP------------PPFNRELVSDESC 242
            +  TPPF P            P F  E V +   
Sbjct: 264 NKKITPPFNPNVSGPMDLKHFDPEFTEEPVPNSVG 298

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  110 bits (276), Expect = 8e-29
 Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 5/126 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D ++ +F GT EYLAPE++ G G+   VDWWTLG+ L+E+  G+ PF   +       I+
Sbjct: 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL 206

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
              L FP        AKDL+  LL++DP RRLG   GA  IK+HPFF  ++W  L  +  
Sbjct: 207 QEPLRFPD--GFDRDAKDLLIGLLSRDPTRRLGYN-GAQEIKNHPFFSQLSWKKLLMKGI 263

Query: 224 TPPFVP 229
            PPF P
Sbjct: 264 QPPFKP 269

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  109 bits (274), Expect = 2e-28
 Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 5/131 (3%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EY+APEI+   GHG  VDWW+LG  ++++  G  PF   + + T+  I+   L 
Sbjct: 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN 218

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNW--ALLRCTTPPF 227
            P  P +   A+DL+ +LL ++P  RLG+  G A+ ++ HPFF+ VNW   L R   PPF
Sbjct: 219 LP--PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLARKVEPPF 276

Query: 228 VPPPFNRELVS 238
            P   + E VS
Sbjct: 277 KPLLQSEEDVS 287

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  109 bits (274), Expect = 2e-28
 Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 10/131 (7%)

Query: 107 VRSMSFVGTHEYLAPEIV----SGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           V+S   VGT +Y++PEI+     G+G  G   DWW+LG+ ++E+ YG TPF       T 
Sbjct: 158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 217

Query: 162 ANIVARA--LEFP-KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
             I+      +FP     V   AKDLI +L+   PE RLG   G    K HPFF+G++W 
Sbjct: 218 GKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRN-GLQDFKDHPFFEGIDWD 275

Query: 219 LLRCTTPPFVP 229
            +R +T P+VP
Sbjct: 276 NIRNSTAPYVP 286

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  108 bits (272), Expect = 1e-27
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 43/237 (18%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD------DSASNAQIISDQNPPIAVLQN 55
           +G ++RD+KP+N+L+  DGHI LTDF L   C       DS    +              
Sbjct: 120 MGFIHRDIKPDNILIDRDGHIKLTDFGL---CTGFRWTHDSKYYQK-------------- 162

Query: 56  EYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGT 115
               DH    S     P+     +   R K   +++  QH             + S VGT
Sbjct: 163 ---GDHHRQDSME---PSEEWSEIDRCRLKPLERRRKRQHQ---------RCLAHSLVGT 207

Query: 116 HEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFPK 173
             Y+APE++   G+    DWW++G+ L+E+  G  PF       T   ++     L  P 
Sbjct: 208 PNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPS 267

Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA-LLRCTTPPFVP 229
           +  +   A DLI +L     E RLG   GA  IK HPFF+G+++A L+R    P++P
Sbjct: 268 QAKLSREASDLILRLCC-GAEDRLGK-NGADEIKAHPFFKGIDFASLIRRQKAPYIP 322

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  106 bits (265), Expect = 1e-27
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 3/108 (2%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           FVGT +YLAPE + G G     DWW+LG  +FE  +G  PF     +    NI++R + +
Sbjct: 153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW 212

Query: 172 PKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
           P+E        A DLI++LL  DP +RLG+  G   IK HPFF+ +NW
Sbjct: 213 PEEVKEFCSPEAVDLINRLLCMDPAKRLGA-NGYQEIKSHPFFKSINW 259

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  106 bits (267), Expect = 2e-27
 Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 7/126 (5%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           + ++ +F GT +Y+APEI+ G+ +   VDWW+ G+ L+E+  G +PF G D +    +I+
Sbjct: 150 EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL 209

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                FP+   +   AKD +S+L  +DP +RLG       I+ HPFF+G++W  L  R  
Sbjct: 210 NDRPHFPR--WISKEAKDCLSKLFERDPTKRLGVD---GDIRQHPFFRGIDWERLEKREI 264

Query: 224 TPPFVP 229
            PPF P
Sbjct: 265 PPPFKP 270

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  104 bits (262), Expect = 6e-27
 Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 9/125 (7%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVARA 168
            GT  Y+APE++ GE +   VDW+ LG  L+E+  G +PFR     V+ E      +  A
Sbjct: 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA 214

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTP 225
           +E+P +   P  AKDL   LL KDPE+RLG     A  ++ HP F+ +NW  L      P
Sbjct: 215 VEYP-DKFSPE-AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEP 272

Query: 226 PFVPP 230
           PF+P 
Sbjct: 273 PFIPD 277

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  105 bits (264), Expect = 7e-27
 Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 10/125 (8%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI------ 164
           S VG+ +Y+APE++ G+G+   VD+W+LG  L+E   G  PF G     T  N+      
Sbjct: 157 SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET 216

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT 224
           + R +       +   A DLI++L+  DP RR GS +    IK+HPFF+ V+W  LR   
Sbjct: 217 LQRPVYDDPRFNLSDEAWDLITKLIN-DPSRRFGSLE---DIKNHPFFKEVDWNELRELK 272

Query: 225 PPFVP 229
           PPFVP
Sbjct: 273 PPFVP 277

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  103 bits (259), Expect = 3e-26
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 7/132 (5%)

Query: 103 EPVD--VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           E +D   ++ SF GT EY+APE+V+  GH    DWW+ G+ +FE+  G  PF+G D + T
Sbjct: 147 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET 206

Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWAL 219
           +  I+   L  P+   +   A+ L+  L  ++P  RLG+   G   IK HPFF  ++W  
Sbjct: 207 MTMILKAKLGMPQ--FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNK 264

Query: 220 L--RCTTPPFVP 229
           L  R   PPF P
Sbjct: 265 LYRREIKPPFKP 276

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  101 bits (255), Expect = 4e-26
 Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)

Query: 106 DVRSMSFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTL 161
                +FVGT  Y+APE++  G G+G  VD W+LG+ L+EL  G  PF G   +D    +
Sbjct: 152 SSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLI 211

Query: 162 ANIVARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
             I+   LEF  PK  +    AKDLI + L KDP +R      A  I  HP+F
Sbjct: 212 RRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRP----TAEEILQHPWF 260

Length = 260

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  103 bits (257), Expect = 5e-26
 Identities = 49/126 (38%), Positives = 77/126 (61%), Gaps = 7/126 (5%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D ++ +F GT +Y+APEI+ G+ + + VDWW+ G+ L+E+  G +PF G D E    +I 
Sbjct: 150 DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR 209

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                +P+   +   AKD++ +L  ++PERRLG  KG   I+ HPFF+ ++W+ L  R  
Sbjct: 210 MDNPCYPR--WLTREAKDILVKLFVREPERRLG-VKG--DIRQHPFFREIDWSALEEREI 264

Query: 224 TPPFVP 229
            PPF P
Sbjct: 265 EPPFKP 270

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  102 bits (255), Expect = 1e-25
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 213

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNW--ALLRCTTPPF 227
           FP+   +   AK L++ LL KDP++RLG     A  I  H FF  +NW   + +   PPF
Sbjct: 214 FPRT--LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPF 271

Query: 228 VP 229
            P
Sbjct: 272 KP 273

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  102 bits (257), Expect = 1e-25
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 15/141 (10%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGH----GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G     G   DWW++G+FL+E+  G TPF       T +
Sbjct: 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 257

Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG--VNWA 218
            I+    +L FP +  +   AKDLI   L  D E RLG   G   IK HPFF+     + 
Sbjct: 258 KIMDHKNSLTFPDDIEISKQAKDLICAFLT-DREVRLGRN-GVDEIKSHPFFKNDQWTFD 315

Query: 219 LLRCTTPPFVPPPFNRELVSD 239
            +R T  P VP     EL SD
Sbjct: 316 NIRETVAPVVP-----ELSSD 331

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score =  104 bits (260), Expect = 2e-25
 Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           +GT +YLAPE++ G+ HG  VDWW LG+ LFE   G+ PF     +    NI+ R + +P
Sbjct: 541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600

Query: 173 K-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
           + E  +   A++ I  LL  DP +R     G   +K HP F GV+W  L+  T PF+P P
Sbjct: 601 EGEEKLSVNAQNAIEILLTMDPTKR----AGLKELKQHPLFHGVDWENLQNQTMPFIPQP 656

Query: 232 FN 233
            +
Sbjct: 657 DD 658

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  101 bits (253), Expect = 2e-25
 Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 4/132 (3%)

Query: 111 SFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           +F GT EYLAPE++  E G+   VD+W+LG+ +FE+  G +PF   D +    NI    +
Sbjct: 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV 214

Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
            FPK   +    +  +  LL ++P+ RLG+ + A  +K HPFF  ++W LL  +  TPPF
Sbjct: 215 RFPKN-VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPF 273

Query: 228 VPPPFNRELVSD 239
            P   + E VS+
Sbjct: 274 KPIVDSDEDVSN 285

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  101 bits (252), Expect = 3e-25
 Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 15/145 (10%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D R+ +F GT +Y+APEI+ G  +   VDWW+ G+ L+E+  G +PF G D +    +I 
Sbjct: 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR 209

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                +P+   +   +KD++ +L  +DP RRLG       I+ HPFF+ +NW  L  R  
Sbjct: 210 VDTPHYPR--WITKESKDILEKLFERDPTRRLGVV---GNIRGHPFFKTINWTALEKREL 264

Query: 224 TPPFVPP--------PFNRELVSDE 240
            PPF P          F+RE +S++
Sbjct: 265 DPPFKPKVKSPSDYSNFDREFLSEK 289

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 99.8 bits (248), Expect = 1e-24
 Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   ++
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIK 213

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
           FP+   + A AK L+S LL KDP +RL G    A  I  H FF GVNW  +  +   PPF
Sbjct: 214 FPR--TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPF 271

Query: 228 VP 229
            P
Sbjct: 272 KP 273

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 99.7 bits (248), Expect = 1e-24
 Identities = 62/159 (38%), Positives = 81/159 (50%), Gaps = 18/159 (11%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           VEP +  S +F GT EYLAPE++  E +   VDWW LG  L+E+ YG+ PF   D     
Sbjct: 147 VEPEETTS-TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY 205

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL- 220
            NI+ + L+ P        A DL+  LL KD  RRLG+      IK+H FF  +NW  L 
Sbjct: 206 DNILHKPLQLP--GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLY 263

Query: 221 -RCTTPPFVP------------PPFNRELVSDESCPETP 246
            +  TPP+ P            P F +E VS  S  +TP
Sbjct: 264 HKRITPPYNPNVAGPADLRHFDPEFTQEAVS-SSVGQTP 301

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 99.5 bits (248), Expect = 1e-24
 Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 13/131 (9%)

Query: 107 VRSMSFVGTHEYLAPEIV------SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           V S   VGT +Y+APE++          +G   DWW+LG+  +E+ YG +PF       T
Sbjct: 158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT 217

Query: 161 LANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
             NI+   R L+FP++P V +   DLI  LL    + RLG       +  HPFF  ++W 
Sbjct: 218 YNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGY----EGLCCHPFFSKIDWN 272

Query: 219 LLRCTTPPFVP 229
            +R + PPFVP
Sbjct: 273 NIRNSLPPFVP 283

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 98.5 bits (245), Expect = 3e-24
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 213

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNW--ALLRCTTPPF 227
           FP+   +   AK L++ LL KDP++RL G    A  +  H FF  +NW   + +   PPF
Sbjct: 214 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 271

Query: 228 VP 229
            P
Sbjct: 272 KP 273

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 97.9 bits (244), Expect = 4e-24
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
              + +F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+
Sbjct: 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM 214

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RC 222
              + +PK  ++   A  +   LL K P +RLG    G   I+ H FF+ ++W  L  R 
Sbjct: 215 EHNVSYPK--SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERRE 272

Query: 223 TTPPFVPPPFNRELVSD 239
             PPF P    R    +
Sbjct: 273 IQPPFKPKVKGRRSAEN 289

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 96.8 bits (241), Expect = 6e-24
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 5/124 (4%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+V  E +    DWW LG  ++E+  G +PFR    ++    +  R  E  
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ 221

Query: 173 KEPAVPAT--AKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNWALLRC--TTPPF 227
           +E +   +  A+ +  QLL KDP  RLG   +GA  +K HPFF+  N+  L      PPF
Sbjct: 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPF 281

Query: 228 VPPP 231
            P P
Sbjct: 282 CPDP 285

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 97.0 bits (241), Expect = 2e-23
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 42/224 (18%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL--SLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
           LG ++RD+KP+N+L+ + GH+ L+DF L   LK        + ++   P     QN    
Sbjct: 120 LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNM--- 176

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
                                      KRK +T + +  +         + S VGT +Y+
Sbjct: 177 -------------------------NSKRKAETWKKNRRQL--------AYSTVGTPDYI 203

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFPKEPAV 177
           APE+    G+    DWW+LG+ ++E+  G  PF     + T   ++     L FP E  +
Sbjct: 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPI 263

Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
              AKDLI +    D E R+GS  G   IK HPFF+GV+W  +R
Sbjct: 264 SEKAKDLILR-FCTDSENRIGSN-GVEEIKSHPFFEGVDWGHIR 305

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 95.5 bits (237), Expect = 3e-23
 Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 5/125 (4%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           + +F GT EYLAPE++  + + + VDWW LG  L+E+ YG+ PF   D      NI+ + 
Sbjct: 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFV 228
           L     P    TA  ++ +LL KD +RRLG+ +    I+ HPFF+ ++W  L       +
Sbjct: 213 LVL--RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKK---I 267

Query: 229 PPPFN 233
           PPPFN
Sbjct: 268 PPPFN 272

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 95.5 bits (237), Expect = 4e-23
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 214

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
           FP+   +   AK L+S LL KDP++RL G    A  I  H FF G+ W  +  +   PPF
Sbjct: 215 FPR--TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPF 272

Query: 228 VP 229
            P
Sbjct: 273 KP 274

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 94.6 bits (235), Expect = 6e-23
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 6/133 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT +Y+APEI+    +G  VDWW +G+ L+E+  G  PF   + +     I+   + 
Sbjct: 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 214

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTK--GASAIKHHPFFQGVNWALL--RCTTPP 226
           +P    +   A D++   + K+P  RLGS    G  AI  HPFF+ ++W  L  R   PP
Sbjct: 215 YPT--WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPP 272

Query: 227 FVPPPFNRELVSD 239
           F P   +RE VS+
Sbjct: 273 FRPRIKSREDVSN 285

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 95.0 bits (236), Expect = 6e-23
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           VD R+ +  GT EY+APEI+   GHG   DWWTLGIF++E+  G  PF   +  L    I
Sbjct: 181 VDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKI 240

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL 220
           +   + FPK   +    K L+ +LL+ D  +R G+  KGA  +K HP+F  ++W  L
Sbjct: 241 LEGIIYFPK--FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSL 295

Length = 340

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 91.2 bits (227), Expect = 5e-22
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D  + S  GT  Y+APE++  +G+   VDWW+LG+  +E   G  P+RG  H  T+ + +
Sbjct: 153 DTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG--HSRTIRDQI 210

Query: 166 ARALEFPKEPAVPAT----AKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            RA +   +   PAT    A D I++LL +DP++RLG       +K+HP+F
Sbjct: 211 -RAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 92.4 bits (229), Expect = 6e-22
 Identities = 69/230 (30%), Positives = 95/230 (41%), Gaps = 73/230 (31%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           L IVYRDLKPEN+L+ S GHI+LTDF L   C ++                      ++H
Sbjct: 115 LNIVYRDLKPENILLDSQGHIVLTDFGL---CKEN----------------------IEH 149

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
              TS  C  P  + P V               H  P                       
Sbjct: 150 NGTTSTFCGTPEYLAPEV--------------LHKQP----------------------- 172

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATA 181
                  +   VDWW LG  L+E+ YG+ PF   +      NI+ + L+   +P +  +A
Sbjct: 173 -------YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSA 223

Query: 182 KDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVP 229
           + L+  LL KD  +RLG+      IK+H FF  +NW  L  +  TPPF P
Sbjct: 224 RHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNP 273

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 90.0 bits (223), Expect = 2e-21
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 5/124 (4%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+++ + +    D+W LG  ++E+  G +PFRG   ++    +  R LE  
Sbjct: 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE 221

Query: 173 KEPAVPAT--AKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLRC--TTPPF 227
           +  +   +  AK +   LL KDP++RLG  + GA  +K HPFF+ +N+  L      PPF
Sbjct: 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPF 281

Query: 228 VPPP 231
           VP P
Sbjct: 282 VPDP 285

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 91.2 bits (226), Expect = 3e-21
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 27/231 (11%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           +G ++RD+KP+N+L+  DGHI LTDF L      +  +    S  +      Q+     +
Sbjct: 120 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVR----QDSMDFSN 175

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
                A+C   + +       +P  +R  +  Q              + S VGT  Y+AP
Sbjct: 176 EWGDPANCRCGDRL-------KPLERRAARQHQR-----------CLAHSLVGTPNYIAP 217

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFPKEPAVPA 179
           E++   G+    DWW++G+ L+E+  G  PF       T   ++    +L  P +  +  
Sbjct: 218 EVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSP 277

Query: 180 TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL-LRCTTPPFVP 229
            A DLI + L + PE RLG   GA  IK HPFF+ ++++  LR  + P++P
Sbjct: 278 EASDLIIK-LCRGPEDRLGKN-GADEIKAHPFFKTIDFSSDLRQQSAPYIP 326

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 90.5 bits (224), Expect = 3e-21
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 14/139 (10%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV------ 155
           + P D  S +F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  +      
Sbjct: 147 LGPGDTTS-TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM 205

Query: 156 -DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFF 212
              +     I+ + +  P+  +V A+   ++   L KDP+ RLG     G S IK H FF
Sbjct: 206 NTEDYLFQVILEKPIRIPRFLSVKASH--VLKGFLNKDPKERLGCQPQTGFSDIKSHTFF 263

Query: 213 QGVNWALL--RCTTPPFVP 229
           + ++W LL  +  TPPF P
Sbjct: 264 RSIDWDLLEKKQVTPPFKP 282

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 90.5 bits (224), Expect = 3e-21
 Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 42/224 (18%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL--SLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
           LG ++RD+KP+N+L+ S GH+ L+DF L   LK        + ++   P     QN    
Sbjct: 120 LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM--- 176

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
                                      KRK +T + +  +         + S VGT +Y+
Sbjct: 177 -------------------------NSKRKAETWKRNRRQL--------AFSTVGTPDYI 203

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFPKEPAV 177
           APE+    G+    DWW+LG+ ++E+  G  PF     + T   ++     L FP E  +
Sbjct: 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPI 263

Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
              AKDLI +    + E R+G+  G   IK +PFF+GV+W  +R
Sbjct: 264 SEKAKDLILRFCC-EWEHRIGAP-GVEEIKTNPFFEGVDWEHIR 305

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 89.3 bits (221), Expect = 4e-21
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 5/124 (4%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+++ E +    DWW LG  ++E+  G +PFR     +    +  R  E  
Sbjct: 162 VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ 221

Query: 173 KE--PAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRCTT--PPF 227
           +E        AK +   LL K+P+ RLG    GA+ +K HP F+ +N+  L      PPF
Sbjct: 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPF 281

Query: 228 VPPP 231
            P P
Sbjct: 282 CPDP 285

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 89.7 bits (222), Expect = 8e-21
 Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL------SLKCDDSASNAQIISDQNPPIAVLQN 55
           +G ++RD+KP+N+L+  DGHI LTDF L      +         + I  D   P  +  +
Sbjct: 120 MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDD 179

Query: 56  EYLVDHPPFTSASCIIPNCIVPAVSCF-RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVG 114
                          + NC      C  R K   ++ T QH             + S VG
Sbjct: 180 ---------------VSNC-----RCGDRLKTLEQRATKQHQ---------RCLAHSLVG 210

Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALEFP 172
           T  Y+APE++  +G+    DWW++G+ LFE+  G  PF       T   ++     L  P
Sbjct: 211 TPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIP 270

Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL-LRCTTPPFVP 229
            +  +   A DLI++L     E RLG   GA  IK HPFF  V+++  +R    P+VP
Sbjct: 271 PQVKLSPEAVDLITKLCCS-AEERLGRN-GADDIKAHPFFSEVDFSSDIRTQPAPYVP 326

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 89.1 bits (221), Expect = 9e-21
 Identities = 66/240 (27%), Positives = 96/240 (40%), Gaps = 84/240 (35%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI+YRDLK +NVL+ ++GHI LTD+ +   C +                           
Sbjct: 116 GIIYRDLKLDNVLLDAEGHIKLTDYGM---CKEGIRPGDT-------------------- 152

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
             TS  C  PN I P                                            E
Sbjct: 153 --TSTFCGTPNYIAP--------------------------------------------E 166

Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-DHELTLAN--------IVARALEFPK 173
           I+ GE +G  VDWW LG+ +FE+  G +PF  V   +    N        I+ + +  P+
Sbjct: 167 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR 226

Query: 174 EPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL--RCTTPPFVP 229
             +V A++  ++   L KDP+ RLG     G   IK HPFF+ ++W LL  +   PP+ P
Sbjct: 227 SLSVKASS--VLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKP 284

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 88.5 bits (219), Expect = 1e-20
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 5/132 (3%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           V + +F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+ 
Sbjct: 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 215

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNWALL--RCT 223
             + +PK  +  A A  +   L+ K P +RLG   +G   IK H FF+ ++W  L  +  
Sbjct: 216 HNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEV 273

Query: 224 TPPFVPPPFNRE 235
            PP+ P    R+
Sbjct: 274 QPPYKPKACGRD 285

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 88.9 bits (220), Expect = 1e-20
 Identities = 55/141 (39%), Positives = 76/141 (53%), Gaps = 15/141 (10%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G    +G   DWW++G+FLFE+  G TPF       T +
Sbjct: 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYS 257

Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG--VNWA 218
            I+    +L FP++  +   AK+LI   L  D E RLG   G   IK HPFF+    NW 
Sbjct: 258 KIMDHKNSLNFPEDVEISKHAKNLICAFLT-DREVRLGRN-GVEEIKQHPFFKNDQWNWD 315

Query: 219 LLRCTTPPFVPPPFNRELVSD 239
            +R T  P VP     EL SD
Sbjct: 316 NIRETAAPVVP-----ELSSD 331

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 88.2 bits (218), Expect = 2e-20
 Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 16/141 (11%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV------ 155
           + P D  S  F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  V      
Sbjct: 147 LRPGDTTST-FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 205

Query: 156 ---DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHP 210
                +     I+ + +  P+  +V A +  ++   L KDP+ RLG     G + I+ HP
Sbjct: 206 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 263

Query: 211 FFQGVNWALL--RCTTPPFVP 229
           FF+ V+W L+  +   PPF P
Sbjct: 264 FFRNVDWDLMEQKQVVPPFKP 284

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 87.7 bits (217), Expect = 2e-20
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 7/134 (5%)

Query: 99  EFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE 158
           E +V+ V  R+  F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +
Sbjct: 150 EHMVDGVTTRT--FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 207

Query: 159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNW 217
               +I+   + +PK  ++   A  +   L+ K P +RLG   +G   I+ H FF+ ++W
Sbjct: 208 ELFQSIMEHNVSYPK--SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW 265

Query: 218 ALL--RCTTPPFVP 229
             L  R   PPF P
Sbjct: 266 DKLENREIQPPFKP 279

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 85.4 bits (211), Expect = 8e-20
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP- 172
           GT+ Y+APEI+  E +  PVDW+ +G  ++E+  G TPF+    ++    +  R LE   
Sbjct: 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215

Query: 173 --KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC--TTPPFV 228
             +       +KD+    LAK PE RLGS +     + H FF+ +N+  L      PPFV
Sbjct: 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFV 275

Query: 229 P 229
           P
Sbjct: 276 P 276

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 86.2 bits (213), Expect = 1e-19
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 15/141 (10%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G    +G   DWW++G+FL+E+  G TPF       T +
Sbjct: 198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 257

Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
            I+    +L FP +  +   AK+LI   L  D E RLG   G   IK H FF+   WA  
Sbjct: 258 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 315

Query: 220 -LRCTTPPFVPPPFNRELVSD 239
            LR T  P VP     +L SD
Sbjct: 316 TLRDTVAPVVP-----DLSSD 331

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 85.1 bits (210), Expect = 2e-19
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 10/131 (7%)

Query: 107 VRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           V+S   VGT +Y++PEI+     G G +G   DWW+LG+ ++E+ YG TPF       T 
Sbjct: 158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 217

Query: 162 ANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
             I+      +FP     V   AKDLI +L+    ERRLG   G    K H FF+G++W 
Sbjct: 218 GKIMNHEERFQFPSHITDVSEEAKDLIQRLICSR-ERRLGQ-NGIEDFKKHAFFEGIDWE 275

Query: 219 LLRCTTPPFVP 229
            +R    P++P
Sbjct: 276 NIRNLEAPYIP 286

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 83.8 bits (207), Expect = 3e-19
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 11/126 (8%)

Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----HELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+     +  
Sbjct: 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RMTLTM 214

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNW--ALLRCTT 224
           A+E P   +     + L+  LL +D  RRLG   +GA  +K HPFF+ ++W    L+   
Sbjct: 215 AVELPDSFS--PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKYP 272

Query: 225 PPFVPP 230
           PP +PP
Sbjct: 273 PPLIPP 278

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 84.5 bits (209), Expect = 3e-19
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 15/133 (11%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            V + +F GT +Y+APEI+    +G  VDWW LG+ ++E+  G  PF   + +    +I+
Sbjct: 150 GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL 209

Query: 166 ARALEFP----KEPAVPATAKDLISQLLAKDPERRLG---STKGASAIKHHPFFQGVNWA 218
              + +P    KE      A  ++   + K+P +RLG   S  G  AIK HPFF+ ++W 
Sbjct: 210 HDDVLYPVWLSKE------AVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWV 263

Query: 219 LL--RCTTPPFVP 229
           LL  R   PPF P
Sbjct: 264 LLEQRKIKPPFKP 276

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 83.1 bits (205), Expect = 6e-19
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 5/124 (4%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+V  E +    DWW LG  L+E+  G +PF+    ++    +     E  
Sbjct: 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221

Query: 173 KEPA--VPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPF 227
           +E +      A+ L   LL KDP+ RLG    GA  +K HP F+ +N+  L      PPF
Sbjct: 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPF 281

Query: 228 VPPP 231
            P P
Sbjct: 282 KPDP 285

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 83.2 bits (205), Expect = 1e-18
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)

Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGV 155
           ++E   V+S   VGT +Y++PEI+     G+G +G   DWW+LG+ ++E+ YG TPF   
Sbjct: 152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211

Query: 156 DHELTLANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
               T   I+      +FP +   V   AKDLI +L+    E RLG   G    K HPFF
Sbjct: 212 SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSR-EHRLGQN-GIEDFKQHPFF 269

Query: 213 QGVNWALLRCTTPPFVP 229
            G++W  +R    P++P
Sbjct: 270 TGIDWDNIRNCEAPYIP 286

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR    ++    +  R
Sbjct: 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 212

Query: 168 ALEFPKEPAV--PATAKDLISQLLAKDPERRLGSTKGASA-IKHHPFFQGVNWALLRC-- 222
            L             +K     LLAKDPE+RLG   G    ++ HP F+ +NW  L    
Sbjct: 213 ILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGM 272

Query: 223 TTPPFVP 229
             PPFVP
Sbjct: 273 LPPPFVP 279

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 77.4 bits (190), Expect = 7e-17
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 11/126 (8%)

Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+    +   
Sbjct: 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVN 215

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTT 224
            +E P   +     K L+  LL +D  +RLG   +GA  +K H FF+G++W    L+   
Sbjct: 216 -VELPD--SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYP 272

Query: 225 PPFVPP 230
           PP +PP
Sbjct: 273 PPLIPP 278

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 21/29 (72%), Positives = 26/29 (89%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGI+YRDLKPEN+L+ +DGHI LTDF L+
Sbjct: 112 LGIIYRDLKPENILLDADGHIKLTDFGLA 140

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 62.6 bits (153), Expect = 1e-11
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
             + VGT  ++APE+++G+ +    D W+LGI   EL  G  P+   +     A      
Sbjct: 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYS--ELPPMKALFKIAT 211

Query: 169 LEFPKEP---AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
              P            KD + + L K+PE+R  + +    +  HPF
Sbjct: 212 NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQ----LLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 63.2 bits (152), Expect = 1e-11
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 15/133 (11%)

Query: 104 PVDVRSMSFVGTHEYLAPEIVSGEGHGSP---VDWWTLGIFLFELFYGVTPFRGVDHELT 160
            +     + VGT  Y+APE++ G          D W+LGI L+EL  G+ PF G  +   
Sbjct: 160 SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA 219

Query: 161 LANIVARALEFPKE-----------PAVPATAKDLISQLLAKDPERRLGST-KGASAIKH 208
            +  +   LE P               +   A DL+ +LLAKDP+ RL S+   +  +  
Sbjct: 220 TSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Query: 209 HPFFQGVNWALLR 221
           H   +  + + L 
Sbjct: 280 HLKLKESDLSDLL 292

Length = 384

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 60.6 bits (148), Expect = 5e-11
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDHELTLANIVAR-ALEF 171
           GT +Y +PE + G  +    DWW +G+  +EL  G  PF    D EL L +++ R   + 
Sbjct: 168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKL 227

Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           P    V   A D +  +L  +   RL +      I  HPF 
Sbjct: 228 PFIKNVSKNANDFVQSMLKYNINYRLTNYN---EIIKHPFL 265

Length = 267

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 60.2 bits (147), Expect = 8e-11
 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-NIVARAL 169
           + VGT  YL+PE+   + +    D W+LG  L+EL     PF G ++ L LA  I+    
Sbjct: 162 TVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEG-ENLLELALKILKG-- 218

Query: 170 EFPKEPAVPATA-KDLISQLLAKDPERR 196
           ++P  P+  ++  ++L+S LL KDPE R
Sbjct: 219 QYPPIPSQYSSELRNLVSSLLQKDPEER 246

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S  GT  ++APE++ GE +G   D W+LG  + E+  G  P+  + + +     +  + E
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE 221

Query: 171 FPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            P+ P  +   AKD + + L +DP++R      A  +  HPF 
Sbjct: 222 PPEIPEHLSEEAKDFLRKCLRRDPKKRP----TADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 58.3 bits (142), Expect = 4e-10
 Identities = 19/27 (70%), Positives = 23/27 (85%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDF 27
            L IVYRDLKPEN+L+ SDG+I +TDF
Sbjct: 119 SLDIVYRDLKPENLLLDSDGYIKITDF 145

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 111 SFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA- 166
           S  GT  Y+APE+++G   +GHG   D W+LG  + E+  G  P+  +D+E  +   V  
Sbjct: 162 SLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221

Query: 167 -RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                 P    +    KD + + L  DP++R      AS +  HPF
Sbjct: 222 GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRP----TASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 19/35 (54%), Positives = 25/35 (71%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            GIV+RDLKPEN+L+  DGH+ L DF L+ + D  
Sbjct: 116 KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPG 150

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 15/100 (15%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVARALEFPK 173
           Y APE+          DWW+LG  LFEL  G T       G++   TL NI     E+  
Sbjct: 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTL-NIP----EWVS 202

Query: 174 EPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFF 212
           E      A+ L+ QLL  +P  RLG+   G   IK HPFF
Sbjct: 203 EE-----ARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 13/106 (12%)

Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           SF G+  ++APE++    G+G   D W+LG  + E+  G  P+     +L     V +  
Sbjct: 160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW----SQLEGVAAVFKIG 215

Query: 170 EFPKEPAVPAT----AKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
              + P +P      AKD I + L +DP  R      A+ +  HPF
Sbjct: 216 RSKELPPIPDHLSDEAKDFILKCLQRDPSLRP----TAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 18/29 (62%), Positives = 25/29 (86%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI++RDLKP+N+L+ S+GH+ LTDF LS
Sbjct: 112 NGIIHRDLKPDNILIDSNGHLKLTDFGLS 140

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 23/39 (58%), Positives = 28/39 (71%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
           LGI+YRDLKPEN+L+  +GHI LTDF LS +  D    A
Sbjct: 117 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH--- 157
           V+E    +  +FVGT  Y++PE + GE +    D W+LG+ L E   G  PF        
Sbjct: 149 VLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208

Query: 158 -ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
            EL +  I                 +D IS  L KDP++R      A+ +  HPF + 
Sbjct: 209 FEL-MQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRP----SAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 13/119 (10%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT---- 160
           V+  + +FVGT  Y+APE + G  +    D W+LG+ L EL  G  P+   +        
Sbjct: 152 VNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFE 211

Query: 161 -LANIVARALEFPKEPA--VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
            L  IV      P+ P+       +D ++  L KDP  R         +  HPF +   
Sbjct: 212 LLQYIVNE--PPPRLPSGKFSPDFQDFVNLCLIKDPRER----PSYKELLEHPFIKKYE 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  S VGT  ++APE++S   +G+ VD W+LGI + E+  G  P+        +  I  R
Sbjct: 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRI--R 228

Query: 168 ALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
               PK      V    +  + ++L +DP +R      A+ + +HPF 
Sbjct: 229 DNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR----ATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-------RGVDHELTLAN 163
           +FVGT  Y++PE + G  +    D W+LGI + EL  G  PF        G D  + + +
Sbjct: 161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220

Query: 164 IVARAL--EFPKEPA--VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           ++ + +    P+ P+   P   +D +   L KDP  R             PF Q
Sbjct: 221 LLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTER---PTPQQLCAMPPFIQ 271

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
           GI++RDLKPEN+L+  +G + + DF L+ K   S+S+  
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLT 156

Length = 260

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  ++APE++  + +G  VD W+LGI   E+  G  P+        L  I  + + 
Sbjct: 175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP 234

Query: 171 FPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASA--IKHHPFFQGVNWALLRCTTPPF 227
             K P       KD +++ L KDPE+R       SA  +  HPF +        C    F
Sbjct: 235 PLKNPEKWSPEFKDFLNKCLVKDPEKR------PSAEELLQHPFLK------KACPKEEF 282

Query: 228 VP 229
            P
Sbjct: 283 AP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 53.2 bits (128), Expect = 3e-08
 Identities = 19/29 (65%), Positives = 23/29 (79%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LG ++RDLKPEN L+ + GHI LTDF LS
Sbjct: 120 LGYIHRDLKPENFLIDASGHIKLTDFGLS 148

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 9/93 (9%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           +GT  Y+APE+  G  +    D W+LG  L+E+     PF     +  L   V R     
Sbjct: 162 IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRYKVQRG---- 216

Query: 173 KEPAVPAT-AKDL---ISQLLAKDPERRLGSTK 201
           K P +P   ++DL   I  +L   P+ R    K
Sbjct: 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDK 249

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 19/29 (65%), Positives = 26/29 (89%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGI+YRD+K EN+L+ S+GH++LTDF LS
Sbjct: 124 LGIIYRDIKLENILLDSEGHVVLTDFGLS 152

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V     S VGT  ++APE++   G  +  D W+LG  + EL  G  P+    ++L     
Sbjct: 152 VSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY----YDLNPMAA 207

Query: 165 VARALEFPKEPAVPAT----AKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           + R ++    P +P       KD + Q   KDP  R      A  +  HP+ 
Sbjct: 208 LFRIVQ-DDHPPLPEGISPELKDFLMQCFQKDPNLR----PTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
             IVYRDLKPEN+L+  +GHI LTDF  + K  D
Sbjct: 120 KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 18/108 (16%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +FVGT  ++APE++   G+    D W+LGI   EL  G  P   +     L  I      
Sbjct: 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLI------ 210

Query: 171 FPKE--PAVPA-----TAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            PK   P++         KD +S  L KDP+ R      A  +  H F
Sbjct: 211 -PKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERP----SAKELLKHKF 253

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI 42
            GI+YRDLKPEN+L+ + GH+ LTDF L   C +S     +
Sbjct: 119 QGIIYRDLKPENILLDAQGHVKLTDFGL---CKESIHEGTV 156

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL 29
           L I+YRDLKPEN+L+ S GH++LTDF L
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 51.6 bits (123), Expect = 1e-07
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224

Query: 162 ANIVARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I        + P  + A  +D +++ L  D +RR GS K    +  HPF +
Sbjct: 225 YLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR-GSAK---ELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 20/29 (68%), Positives = 26/29 (89%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGIVYRD+K EN+L+ S+GH++LTDF LS
Sbjct: 124 LGIVYRDIKLENILLDSEGHVVLTDFGLS 152

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 19/29 (65%), Positives = 26/29 (89%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGI+YRD+K EN+L+ S+GH++LTDF LS
Sbjct: 124 LGIIYRDIKLENILLDSNGHVVLTDFGLS 152

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS---NAQIISDQNPPIAVLQNEYLV 59
             VYRDLKPEN+L+   GHI ++D  L++K  +  S       +    P   VL N+   
Sbjct: 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAP--EVLNNQRYT 179

Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
             P +    C+I   ++   S FR ++++ K+
Sbjct: 180 LSPDYWGLGCLIYE-MIEGQSPFRGRKEKVKR 210

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224

Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R      A  +  HPF +
Sbjct: 225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR----GSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 29/115 (25%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL- 169
           + +GT  ++APE++   G+ +  D W+LGI   E+  G  P+  + H +       RA+ 
Sbjct: 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI-HPM-------RAIF 209

Query: 170 EFPKEPAVPATAK----------DLISQLLAKDPERRLGSTKGASAIK--HHPFF 212
             P +P  P T            D + + L KDPE R       SAI+   HPF 
Sbjct: 210 MIPNKP--PPTLSDPEKWSPEFNDFVKKCLVKDPEER------PSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           +DV S SF GT  YLAPE+   + +    D W+LG+ L+EL     PF+G      +  +
Sbjct: 225 LDVAS-SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV 283

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK 201
           +    + P    V +  K L+  LL+K+P  R  + +
Sbjct: 284 LYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPTTQQ 319

Length = 478

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 16/79 (20%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN---------AQIISDQNPPIAV 52
             I+YRDLKPEN+L+ + GH+ +TDF  + K  D              ++I  +    AV
Sbjct: 137 KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAV 196

Query: 53  -------LQNEYLVDHPPF 64
                  L  E++  +PPF
Sbjct: 197 DWWTMGVLLYEFIAGYPPF 215

Length = 329

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 17/42 (40%), Positives = 24/42 (57%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
           GIV+RD+K  N+LV SDG + L DF  + +  D  +     S
Sbjct: 121 GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS 162

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 11/93 (11%)

Query: 111 SFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA-R 167
           +F GT +Y+APE++     G+G+P D W+LG  + E+  G  PF     EL        +
Sbjct: 168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF----IELGEPQAAMFK 223

Query: 168 ALEFPKEPAVP----ATAKDLISQLLAKDPERR 196
              F   P +P    A AK+ I +    DP++R
Sbjct: 224 VGMFKIHPEIPESLSAEAKNFILRCFEPDPDKR 256

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.7 bits (119), Expect = 3e-07
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 22/126 (17%)

Query: 100 FVVEPVDVRSMS---FVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
            + +  D        FVGT  ++APE++    G+    D W+ GI   EL  G  P+   
Sbjct: 151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPY--- 207

Query: 156 DHELTLANIVARALEFPKEPAVPATA---------KDLISQLLAKDPERRLGSTKGASAI 206
             +     ++   L+    P++   A         + +IS  L KDP +R      A  +
Sbjct: 208 -SKYPPMKVLMLTLQNDP-PSLETGADYKKYSKSFRKMISLCLQKDPSKR----PTAEEL 261

Query: 207 KHHPFF 212
             H FF
Sbjct: 262 LKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 16/26 (61%), Positives = 22/26 (84%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDF 27
            GI+YRDLKPEN+L+ S+G++ L DF
Sbjct: 112 RGIIYRDLKPENLLLDSNGYVKLVDF 137

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S  GT  +++PE++SGEG+G   D W++G  + E+     P+   +    +  I  +   
Sbjct: 166 SVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ--- 222

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            P  P +P+         L +           A  +  H F 
Sbjct: 223 -PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 49.3 bits (117), Expect = 5e-07
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 20/125 (16%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  ++APE++S   +G+ VD W+LGI + E+  G  P+       +    + R  +
Sbjct: 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRD 231

Query: 171 FPKEPA-----VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
            P         +    +D + ++L ++P+ R      A  +  HPF       LL+   P
Sbjct: 232 SPPPKLKNAHKISPVLRDFLERMLTREPQER----ATAQELLDHPF-------LLQTGLP 280

Query: 226 PFVPP 230
             + P
Sbjct: 281 ECLVP 285

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 49.5 bits (118), Expect = 5e-07
 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT  Y+APEI   + +    D ++LG+ L+EL     PF G + E  +   +A   +
Sbjct: 204 TFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD 263

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTK 201
            P  P++    +++++ LL+ DP+RR  S+K
Sbjct: 264 -PLPPSISPEMQEIVTALLSSDPKRRPSSSK 293

Length = 496

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 38/103 (36%)

Query: 109 SMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
             + VGT  Y+APE++ G+G+     D W+LG+ L+EL                      
Sbjct: 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------- 187

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP 210
                         KDLI ++L KDPE+R      A  I  H 
Sbjct: 188 -----------PELKDLIRKMLQKDPEKRP----SAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 49.0 bits (116), Expect = 6e-07
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224

Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      +    +D +++ L  D E+R GS K    +  HPF +
Sbjct: 225 YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR-GSAK---ELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 7e-07
 Identities = 16/27 (59%), Positives = 22/27 (81%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           IV+RDLKP+N+LV SDG + + DF L+
Sbjct: 128 IVHRDLKPQNILVTSDGQVKIADFGLA 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 49.1 bits (117), Expect = 8e-07
 Identities = 18/28 (64%), Positives = 25/28 (89%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           GI++RDLKP+N+L+ ++GHI LTDF LS
Sbjct: 124 GIIHRDLKPDNMLISNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 48.7 bits (117), Expect = 8e-07
 Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 49/162 (30%)

Query: 112 FVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD--HELTLANIV--- 165
           +V T  Y APE++ S   +   +D W++G    EL      F G D   +L L  IV   
Sbjct: 166 YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL--IVEVL 223

Query: 166 -------------ARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGS 199
                         +A  +    PK+P  P           A DL+ ++L  DP++R+  
Sbjct: 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRI-- 281

Query: 200 TKGASAIKHHPFFQGVNWALLRC------TTPPFVPPPFNRE 235
                A+  HP+        L          PPF    F+ +
Sbjct: 282 -TADEALA-HPYLAQ-----LHDPEDEPVAKPPFDFDFFDDD 316

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           GI++RD+KPEN+L+   GH+ LTDF LS
Sbjct: 117 GIIHRDIKPENLLIDQTGHLKLTDFGLS 144

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (115), Expect = 1e-06
 Identities = 19/27 (70%), Positives = 22/27 (81%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           IVYRDLKPEN+L+ + GHI L DF LS
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLS 143

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           ++VGT  Y++PE ++   +    D W+LG  ++EL     PF   +  L LA+ +     
Sbjct: 169 TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-LQLASKIKEG-- 225

Query: 171 FPKEPAVPA----TAKDLISQLLAKDPERR 196
             K   +P        ++I  +L  DP++R
Sbjct: 226 --KFRRIPYRYSSELNEVIKSMLNVDPDKR 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVARAL 169
           + VGT  Y++PE+  G  +    D W LG  L+EL      F    + L L   IV    
Sbjct: 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA-TNPLNLVVKIVQGNY 218

Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
                    +    L+  LL +DPE+R
Sbjct: 219 TPVVSV-YSSELISLVHSLLQQDPEKR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL 29
           L I+YRDLKPEN+L+ S GH++LTDF L
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 26/115 (22%)

Query: 111 SFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           SF+GT  ++APE+ + E   G+    D W LGI   EL     P   +           R
Sbjct: 160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH--------PMR 211

Query: 168 ALEF-PKEPAVPATAKD----------LISQLLAKDPERRLGSTKGASAIKHHPF 211
           AL    K    P   KD           I + L KDP++R      A+ +  HPF
Sbjct: 212 ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKR----PTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225

Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTK 201
             I      E      + A  +D +++ L  D E+R GS K
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK 265

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-TLANIVARAL 169
           S VGT  Y++PE +   G+    D W+LG  L+E+    +PF G    L +L   + +  
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC- 223

Query: 170 EFPKEPAVPATA--KDLISQLLAKDPERRL 197
           ++P  PA   +   +DL+S+ +  DPE+R 
Sbjct: 224 DYPPLPADHYSEELRDLVSRCINPDPEKRP 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 16/120 (13%)

Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E V+  + +F GT  Y+APE + G+ +    D W+LG+ L E+     PF   + E  L 
Sbjct: 154 ELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP-EGEPPLG 212

Query: 163 -----NIVARA--LEFPKEPAVPA----TAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                + +      E   EP          KD I Q L KDP RR         +  HP+
Sbjct: 213 PIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWD----MLEHPW 268

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL 29
           + IVYRDLKPEN+L+ S GH++LTDF L
Sbjct: 115 INIVYRDLKPENILLDSQGHVVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-HELTLANIVARALEF 171
           VGT  YL+PEI     + +  D W+LG  L+EL     PF G + H+L L   + +    
Sbjct: 163 VGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLK--ICQGYFA 220

Query: 172 PKEPAVPATAKDLISQLLAKDPERR 196
           P  P      + LISQL    P  R
Sbjct: 221 PISPNFSRDLRSLISQLFKVSPRDR 245

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 35/131 (26%)

Query: 112 FVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +V T  Y APE++ G +G+ +PVD W++G    EL      F G   E+     + R L 
Sbjct: 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPG-KSEIDQLFKIFRTLG 216

Query: 171 FPKE-----------------------------PAVPATAKDLISQLLAKDPERRLGSTK 201
            P                               P     A DL+SQ+L  DP +R+    
Sbjct: 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI---- 272

Query: 202 GASAIKHHPFF 212
            A     HP+F
Sbjct: 273 TAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + VGT  YL+PE+   + +    D W LG+ L+E   G  PF   +++  L   + R + 
Sbjct: 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD-ANNQGALILKIIRGVF 218

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTK 201
            P           LI Q L KD  +R  + +
Sbjct: 219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQ 249

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI--VARAL 169
            +GT  ++APE++ GE +G   D W++G  + E+     P+    H   LA I  +A A 
Sbjct: 168 LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT 227

Query: 170 EFPKEPA--VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
             P  P    P   +D+  + L   PE R      +  +  HP F
Sbjct: 228 TAPSIPEHLSPGL-RDVTLRCLELQPEDR----PPSRELLKHPVF 267

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 11/98 (11%)

Query: 108 RSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +  +FVGT  ++APE+++ G+ + +  D W+LGI ++E+  G  P+  VD       ++ 
Sbjct: 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-AFRAMMLIP 215

Query: 167 RALEFPKEPAVP-----ATAKDLISQLLAKDPERRLGS 199
           ++    K P +         ++ ++  L ++P+ RL +
Sbjct: 216 KS----KPPRLEDNGYSKLLREFVAACLDEEPKERLSA 249

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 22/101 (21%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA---------- 51
             IVYRDLKPENVL+   G++ ++  DL L  +        +                  
Sbjct: 114 RRIVYRDLKPENVLLDDHGNVRIS--DLGLAVE--------LKGGKKIKGRAGTPGYMAP 163

Query: 52  -VLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
            VLQ E       + +  C +   ++   S FR ++++ +K
Sbjct: 164 EVLQGEVYDFSVDWFALGCTLYE-MIAGRSPFRQRKEKVEK 203

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.4 bits (110), Expect = 4e-06
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           ++SM   GT  ++APE+++  G+G   D W++G  +FE+  G  P   +D    +  I A
Sbjct: 165 LKSMH--GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGA 222

Query: 167 RALEFPKEP-AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                P+ P +  A A D ++  L +D   R      A  +  H F
Sbjct: 223 HRGLMPRLPDSFSAAAIDFVTSCLTRDQHER----PSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 19/81 (23%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLK--CDDSASNA----------QIISDQNPPI 50
           GI+YRDLK +NVL+ S+GHI + DF +  +       ++           +I+S Q    
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGP 175

Query: 51  A-------VLQNEYLVDHPPF 64
           A       VL  E L    PF
Sbjct: 176 AVDWWALGVLLYEMLAGQSPF 196

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 3   GIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDS 36
           GI++RDLKPEN+L+ SD G + L DF LS      
Sbjct: 112 GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 45.4 bits (107), Expect = 9e-06
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S  GT  +++PE++SGEG+G   D W+LG  + E+     P+   ++E  +A I   A +
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPW--AEYE-AMAAIFKIATQ 224

Query: 171 FPKEPAVPA----TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            P  P +P+     A+D +  +  +   R       A  +  HPF Q
Sbjct: 225 -PTNPQLPSHISEHARDFLGCIFVEARHR-----PSAEELLRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 29/127 (22%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI-----V 165
           S V T  Y APE++    + +PVD W++G    ELF     FRG      L  I     +
Sbjct: 165 SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGL 224

Query: 166 ARALEFPKEPAVP--------------------ATAKDLISQLLAKDPERRLGSTKGASA 205
               E+P+  ++P                        DL+ ++L  +P +R+     A  
Sbjct: 225 PSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRI----SAFE 280

Query: 206 IKHHPFF 212
              HP+F
Sbjct: 281 ALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  S VGT  ++APE++S   +G  VD W+LGI + E+  G  P+   +  L    ++  
Sbjct: 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-EPPLKAMKMIRD 230

Query: 168 AL--EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
            L  +      V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 231 NLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 39/132 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANI--- 164
           THE     Y APEI+ G  H  + VD W++G IF  E+  G   F G      L  I   
Sbjct: 156 THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFA-EMITGKPLFPGDSEIDQLFKIFQI 214

Query: 165 -----------VAR----ALEFPKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
                      V +       FPK P                DL+S++L  +P +R+   
Sbjct: 215 LGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI--- 271

Query: 201 KGASAIKHHPFF 212
             A     HP+F
Sbjct: 272 -SAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 28/42 (66%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           ++VGT+ Y+APE +SGE +G   D W+LGI   EL  G  P+
Sbjct: 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPY 193

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS---NAQIISDQNPPIAVLQNEYLVD 60
           IVYRDLKPEN+L+   GHI ++D  L+++  +  +       +    P   V+ NE    
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAP--EVINNEKYTF 180

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
            P +    C+I   ++   S FR +++R K+
Sbjct: 181 SPDWWGLGCLIYE-MIQGQSPFRKRKERVKR 210

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKC-DDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           IVYRDLKPEN+L+   GHI ++D  L++   +      ++ +       V++NE     P
Sbjct: 123 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP 182

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKK 91
            + +  C++   ++   S F+ ++K+ K+
Sbjct: 183 DWWALGCLLYE-MIAGQSPFQQRKKKIKR 210

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
           I+YRDLKPENVL+ +DG++ ++D  L+++  D  S
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIA-----VLQNEYL 58
           IVYRDLKPEN+L+   GHI ++D  L+++        + I  +   +      V++NE  
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVE----IPEGETIRGRVGTVGYMAPEVVKNERY 178

Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSF 112
              P +    C+I   I        P R+RK+K  +      V E  +  S  F
Sbjct: 179 TFSPDWWGLGCLIYEMIEGK----SPFRQRKEKVKREEVERRVKEDQEEYSEKF 228

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  Y  PEIV  E +G   D W  G  L+++     PF   +  L+LA  +  A+ 
Sbjct: 172 SVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-LSLATKIVEAVY 230

Query: 171 FP-KEPAVPATAKDLISQLLAKDPERR 196
            P  E        D+I+  L  D E R
Sbjct: 231 EPLPEGMYSEDVTDVITSCLTPDAEAR 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 36/131 (27%)

Query: 112 FVGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTP-FRGVDH------------ 157
           +V T  Y APEI +S + +   +D W++G  L EL  G  P F+G D+            
Sbjct: 169 YVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAEL-LGRKPVFKGKDYVDQLNQILQVLG 227

Query: 158 ---ELTLANI-VARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
              E TL+ I   +A  +    P  P  P           A DL+ +LLA DP +R+   
Sbjct: 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVE 287

Query: 201 KGASAIKHHPF 211
               A++ HP+
Sbjct: 288 ---EALE-HPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 14/25 (56%), Positives = 21/25 (84%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           GI+YRDLK +NV++ ++GHI + DF
Sbjct: 121 GIIYRDLKLDNVMLDAEGHIKIADF 145

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 14/30 (46%), Positives = 25/30 (83%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
           GI++RD+KP+N+L+   GH+ +TDF+++ K
Sbjct: 120 GIIHRDIKPDNILLDEQGHVHITDFNIATK 149

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 36/131 (27%)

Query: 113 VGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI------- 164
           V T  Y  PE++ G    G  VD W++G  L ELF G   F+G      L  I       
Sbjct: 162 VITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP 221

Query: 165 -----------------------VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK 201
                                    R  EF K   +  +A DL+ +LL  DP++R+ S  
Sbjct: 222 TDENWPGVSKLPWFENLKPKKPYKRRLREFFKH-LIDPSALDLLDKLLTLDPKKRI-SAD 279

Query: 202 GASAIKHHPFF 212
            A     H +F
Sbjct: 280 QA---LQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 17/132 (12%)

Query: 111 SFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           S VGT  Y++PE ++     G   G   D W+LG+ + E + G  PF GV  +   A+++
Sbjct: 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPF-GVGRQGDWASLM 285

Query: 166 ARALEFPKEPAVPATA----KDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
             A+   + P  PATA    +  IS  L ++P +R      A  +  HPF         +
Sbjct: 286 C-AICMSQPPEAPATASREFRHFISCCLQREPAKRW----SAMQLLQHPFILRAQPGQGQ 340

Query: 222 C--TTPPFVPPP 231
                   +PPP
Sbjct: 341 GGPNLHQLLPPP 352

Length = 353

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
            +VYRDLK EN+++  DGHI +TDF L
Sbjct: 115 DVVYRDLKLENLMLDKDGHIKITDFGL 141

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
            S  GT  +++PE++SGEG+G   D W++G  + E+     P+   +    +  I  +  
Sbjct: 167 KSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ-- 224

Query: 170 EFPKEPAVPATAKDLISQLLAK 191
             P  P +P    D     L +
Sbjct: 225 --PTNPVLPPHVSDHCRDFLKR 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 36/144 (25%), Positives = 50/144 (34%), Gaps = 35/144 (24%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---V 155
            +          +V T  Y APE+ V    +G PVD W +G  + EL  G   F G   +
Sbjct: 149 ALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI 208

Query: 156 DH----------------ELTLANIVARALEFP----KEP-------AVPATAKDLISQL 188
           D                 EL  +N     + FP     E         V + A D +   
Sbjct: 209 DQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKAC 268

Query: 189 LAKDPERRLGSTKGASAIKHHPFF 212
           L  DP+ RL        +  HP+F
Sbjct: 269 LRMDPKERL----TCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 14/29 (48%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI++RDLKP N+L+ +DG + + DF L+
Sbjct: 118 NGIMHRDLKPANLLISADGVLKIADFGLA 146

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 42.7 bits (100), Expect = 6e-05
 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  Y++PE +   G+    D W+LG  L+E+    +PF G    L          +
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 224

Query: 171 FPKEPA--VPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           +P  P+       + L++  +  DPE+R   T      K 
Sbjct: 225 YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
            LG V+RD+KP+NVL+  +GHI L DF   L+     +
Sbjct: 120 QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
           GI++RD+K  N+L+ SDG + L DF LS +  D+
Sbjct: 118 GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 28/118 (23%)

Query: 111 SFVGTHEYLAPEIVSGEGHGS-PVDW----WTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           +F+GT  ++APE+V+ E     P D+    W+LGI L EL     P     HEL    ++
Sbjct: 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPP----HHELNPMRVL 217

Query: 166 ARALEFPKEPAVPATA----------KDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              L+  K    P T            D +   L KDP+ R      A+ +  HPF  
Sbjct: 218 ---LKILKSE--PPTLDQPSKWSSSFNDFLKSCLVKDPDDRP----TAAELLKHPFVS 266

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  Y++PE +   G+    D W+LG  L+E+    +PF G    L          +
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD 224

Query: 171 FPKEPAVPATAK--DLISQLLAKDPERR 196
           +P  P    + K  +L+S  +  DP++R
Sbjct: 225 YPPLPTEHYSEKLRELVSMCIYPDPDQR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 42.8 bits (101), Expect = 8e-05
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
           I++RD+KP N+LV S G I L DF +S +  DS +N+
Sbjct: 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 157

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 44/140 (31%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR---- 167
           +V T  Y APE++ G G+   VD W++G  + EL  G   F+G DH      ++ +    
Sbjct: 182 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 241

Query: 168 ALEF---------------PKEPAVPAT---------------------AKDLISQLLAK 191
           + EF               P+ P +                        A+DL+S++L  
Sbjct: 242 SAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVI 301

Query: 192 DPERRLGSTKGASAIKHHPF 211
           DP++R+   +       HP+
Sbjct: 302 DPDKRISVDEAL----RHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 16/26 (61%), Positives = 20/26 (76%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDF 27
           +G V+RD+KPENVL+   GHI L DF
Sbjct: 121 MGYVHRDIKPENVLIDRTGHIKLADF 146

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 18/29 (62%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           L IVYRDLKPEN+L+  DG I +TDF  +
Sbjct: 150 LNIVYRDLKPENLLLDKDGFIKMTDFGFA 178

Length = 340

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
           + IVYRD+KPENVL+   G+  L+D  L+++  D  +  Q
Sbjct: 114 MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQ 153

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
             I++RD+KP N+LV S G I L DF +S +  +S +  
Sbjct: 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT 158

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 16/28 (57%), Positives = 20/28 (71%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDL 29
             ++YRDLKPEN+L+   GHI L DF L
Sbjct: 112 FNVIYRDLKPENILLDYQGHIALCDFGL 139

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 15/27 (55%), Positives = 20/27 (74%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           I++RD+KP N+LV S G I L DF +S
Sbjct: 125 IMHRDIKPSNILVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
           G+++RD+K  N+L   DG + L DF ++ K +D + +
Sbjct: 119 GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 35/130 (26%), Positives = 47/130 (36%), Gaps = 35/130 (26%)

Query: 113 VGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           V T  Y APE++ G       VD W +G    EL  G   F G ++++    IV R L  
Sbjct: 161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG-ENDIEQLAIVFRTLGT 219

Query: 172 PKE-----------------------------PAVPATAKDLISQLLAKDPERRLGSTKG 202
           P E                             P     A DL+  LL  DP +RL + + 
Sbjct: 220 PNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEA 279

Query: 203 ASAIKHHPFF 212
                 HP+F
Sbjct: 280 LR----HPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARA-LEFPKEP 175
           ++APE +      S  D W+ G+ L+E+F  G TP+ G+ +E  L  +     L  P+  
Sbjct: 173 WMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEY- 231

Query: 176 AVPATAKDLISQLLAKDPERR 196
             P    +L+      DPE R
Sbjct: 232 -CPDELYELMLSCWQLDPEDR 251

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 19/129 (14%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA----NIVA 166
           S VGT  ++APE++S   +G+ VD W+LGI + E+  G  P+        +     N+  
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP 236

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPP 226
           R  +  K   V +  +  +  +L ++P +R      A  +  HPF        L+   PP
Sbjct: 237 RVKDSHK---VSSVLRGFLDLMLVREPSQR----ATAQELLQHPF--------LKLAGPP 281

Query: 227 FVPPPFNRE 235
               P  R+
Sbjct: 282 SCIVPLMRQ 290

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 34/138 (24%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH--ELT-- 160
           D     +V T  Y APE++    H    VD W++G  + E+  G T F+G D+  +LT  
Sbjct: 168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 227

Query: 161 --------------LANIVARAL-----EFPKE------PAVPATAKDLISQLLAKDPER 195
                         L +  A++      ++P++      P     A DL+ ++L  D ++
Sbjct: 228 LKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDK 287

Query: 196 RLGSTKGASAIKHHPFFQ 213
           RL +T+       HP+F 
Sbjct: 288 RLTATEALE----HPYFD 301

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 38/131 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           THE     Y APE++ G  H  +PVD W++G    E+      F G D EL     + + 
Sbjct: 169 THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG-DSELQQLLHIFKL 227

Query: 169 L------------------EFPKEP------AVP---ATAKDLISQLLAKDPERRLGSTK 201
           L                  EFP+        AVP       DL+ ++L  DP +R+ S K
Sbjct: 228 LGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRI-SAK 286

Query: 202 GASAIKHHPFF 212
            A     HP+F
Sbjct: 287 AAL---THPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 34/131 (25%)

Query: 112 FVGTHEYLAPEIVSGEGHGS-PVDWWTLGIFLFELFYGVTPFRGVDH--ELT-LANIV-- 165
           +V T  Y APEI+    H +  VD W++G  + EL  G T F G DH  +L  + N+V  
Sbjct: 175 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234

Query: 166 -------------ARAL-----EFPKE------PAVPATAKDLISQLLAKDPERRLGSTK 201
                        AR       + PK+            A DL+ ++L  DP++R+ + +
Sbjct: 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAE 294

Query: 202 GASAIKHHPFF 212
             +    HP+ 
Sbjct: 295 ALA----HPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT  Y++PE +  +G+ S  D W+LG  L+E+      F G +      ++V R +E
Sbjct: 164 TFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN----FLSVVLRIVE 219

Query: 171 FPKEPAVPATAKD----LISQLLAKDPERR 196
            P  P++P T       ++  +L KDP  R
Sbjct: 220 GPT-PSLPETYSRQLNSIMQSMLNKDPSLR 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 13/96 (13%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           ++  +FVGT  ++APE++    + S  D W+LGI   EL  G  P   +     L  I  
Sbjct: 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-- 213

Query: 167 RALEFPKEPAVPATA------KDLISQLLAKDPERR 196
                PK      T       K+ I   L KDP  R
Sbjct: 214 -----PKNNPPTLTGEFSKPFKEFIDACLNKDPSFR 244

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 134 DWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKD 192
           D W+ GI L E+  YG  P+ G+ +   L   V R    P+ P  P    DL+ Q   KD
Sbjct: 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQ-VERGYRMPRPPNCPEELYDLMLQCWDKD 244

Query: 193 PERR 196
           PE R
Sbjct: 245 PEER 248

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 16/25 (64%), Positives = 20/25 (80%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           GI+YRDLK +NVL+  DGHI + DF
Sbjct: 116 GIIYRDLKLDNVLLDKDGHIKIADF 140

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISD 45
           +G ++RD+KP+N+L+   GH+ L DF   +K D   +N  +  D
Sbjct: 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD---ANGMVRCD 201

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 20/27 (74%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           I++RD+KP N+L+ S G + + DF +S
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGIS 147

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 48/143 (33%)

Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 168 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220

Query: 156 DH----------------------ELTLANIV-------ARALE--FPKE--PA------ 176
           DH                      + T+ N V         + E  FP    P       
Sbjct: 221 DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280

Query: 177 --VPATAKDLISQLLAKDPERRL 197
               + A+DL+S++L  DPE+R+
Sbjct: 281 KLKASQARDLLSKMLVIDPEKRI 303

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S  G+  ++APE+V    +    D W+LG  + E+  G  PF        +  I   A  
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS- 229

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
               P +P+         L K  E        A+ +  HPF
Sbjct: 230 ----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL--SLKCDDSASNAQIISD 45
            +++RDLKP N+L+ SD  + L DF L  SL   +      +++D
Sbjct: 127 NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTD 171

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 3/37 (8%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
           IVYRDLK EN+++  DGHI +TDF L   C +  ++A
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGL---CKEGITDA 149

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 40.3 bits (94), Expect = 5e-04
 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            +VYRDLKP N+L+   GH+ ++  DL L CD S
Sbjct: 117 FVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228

Query: 156 DH 157
           DH
Sbjct: 229 DH 230

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           ++  +FVGT  ++APE++    +    D W+LGI   EL  G  P   + H + +  ++ 
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIP 214

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERR 196
           +      E       K+ +   L KDP  R
Sbjct: 215 KNSPPTLEGQYSKPFKEFVEACLNKDPRFR 244

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)

Query: 112 FVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRG---VD--HELT--LAN 163
           +V T  Y APE++ G+  +G  VD W +G  + E+  G   F G   +D  + +   L N
Sbjct: 160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGN 219

Query: 164 IVAR--------------ALEFPKE--------PAVPATAKDLISQLLAKDPERRLGSTK 201
           ++ R               L   KE        P +     DL  Q L  DP+ R  S  
Sbjct: 220 LIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS-- 277

Query: 202 GASAIKHHPFF 212
             S + HH FF
Sbjct: 278 --SQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 21/44 (47%), Positives = 30/44 (68%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQ 46
           GI++RDLK +N+LV +DG   ++DF +S K DD   N Q +S Q
Sbjct: 128 GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQ 171

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 12/27 (44%), Positives = 21/27 (77%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           I++RD+KP+N+ + S+G + L DF +S
Sbjct: 124 ILHRDIKPQNIFLTSNGLVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 14/28 (50%), Positives = 21/28 (75%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            I++RDLKP+N+L+  DG + L DF L+
Sbjct: 118 RILHRDLKPQNILINRDGVLKLADFGLA 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 109 SM--SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           SM  SFVGT  Y++PE + G  +    D W+LG+ L E+  G  P    D    L  +  
Sbjct: 153 SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-AKELEAMFG 211

Query: 167 RALE 170
           R + 
Sbjct: 212 RPVS 215

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 15/26 (57%), Positives = 21/26 (80%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDL 29
           +VYRD+K EN+++  DGHI +TDF L
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGL 141

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 39.6 bits (92), Expect = 8e-04
 Identities = 16/26 (61%), Positives = 21/26 (80%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDL 29
           +VYRDLK EN+++  DGHI +TDF L
Sbjct: 117 VVYRDLKLENLMLDKDGHIKITDFGL 142

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 44/142 (30%), Positives = 58/142 (40%), Gaps = 43/142 (30%)

Query: 107 VRSM----SFVGTHEYLAPEIV--SGEGHGSPVDWWTLGIFLFELFYGVTP-FRG---VD 156
           +RS      +V T  Y APEI+  S   + SPVD W LG  + EL Y + P F G   +D
Sbjct: 149 IRSRPPYTDYVSTRWYRAPEILLRSTS-YSSPVDIWALGCIMAEL-YTLRPLFPGSSEID 206

Query: 157 HEL-----TLAN----------IVARALE--FPKE---------PAVPATAKDLISQLLA 190
            +L      L             +A  L   FP+          P     A DLI  +L 
Sbjct: 207 -QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLR 265

Query: 191 KDPERRLGSTKGASAIKHHPFF 212
            DP++R      AS    HP+F
Sbjct: 266 WDPKKRP----TASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 39.8 bits (93), Expect = 8e-04
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 16/96 (16%)

Query: 113 VGTHEYLAPEIVSGEG-HGSPV-----DWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +G   Y+APE +   G + +P      D W+LG+ + E+  G  P+       T ANI A
Sbjct: 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP----PETYANIFA 217

Query: 167 R--ALEFPKEPAVPA----TAKDLISQLLAKDPERR 196
           +  A+     P +P+     A+D +++ L K P RR
Sbjct: 218 QLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRR 253

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 52/240 (21%), Positives = 75/240 (31%), Gaps = 107/240 (44%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI +RD+KPEN+L+           D+ LK  D  S   I S                 P
Sbjct: 120 GIFHRDIKPENILI---------KDDI-LKLADFGSCRGIYS----------------KP 153

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
           P+T                                              ++ T  Y APE
Sbjct: 154 PYTE---------------------------------------------YISTRWYRAPE 168

Query: 123 IVSGEGHGSP-VDWWTLGIFLFE------LFYGV--------------TPFRGVDHELTL 161
            +  +G+  P +D W +G   FE      LF G               TP   V  +   
Sbjct: 169 CLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228

Query: 162 ANIVARALEFPKE---------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +        FP +         P   A   DL+ +LLA DP+ R+ + +       HP+F
Sbjct: 229 SR--HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL----RHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (91), Expect = 9e-04
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 13/105 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S  GT  +++PE++SGEG+G   D W++   + E+     P+   +    +A I   A +
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE---AMAAIFKIATQ 224

Query: 171 FPKEPAVP----ATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            P +P +P       +D + Q+  ++  R       A  +  HPF
Sbjct: 225 -PTKPMLPDGVSDACRDFLKQIFVEEKRRPT-----AEFLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
            IVYRDLK +N+L+ ++G + + DF L
Sbjct: 121 KIVYRDLKLDNLLLDTEGFVKIADFGL 147

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 14/36 (38%), Positives = 26/36 (72%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSA 37
           +G+++RD+KP+N+L+   GH+ L DF   +K D++ 
Sbjct: 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 5   VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
           V+RD+KP+NVL+  +GHI L DF   LK +   +
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 13/25 (52%), Positives = 20/25 (80%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           G++YRDLK +N+L+ ++GH  L DF
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLADF 140

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 3   GIVYRDLKPENVLVRSDGH-IMLTDFDLSLKCDDSASNAQIISDQNPPI 50
           GI++RD+KPEN+L+  DG  + L DF L+    D  S + I +  +  +
Sbjct: 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSV 169

Length = 384

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 39.4 bits (93), Expect = 0.001
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISD 45
            +++RDLKP N+LV S+  + + DF L+   D        +++
Sbjct: 123 NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTE 165

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 15/27 (55%), Positives = 22/27 (81%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
           GI++RDLKPEN+L+ ++G + L DF L
Sbjct: 118 GILHRDLKPENLLINTEGVLKLADFGL 144

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
           GI++RD+K  N+L+ +DG + L DF L
Sbjct: 120 GILHRDIKGSNILINNDGVLKLADFGL 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
            I++RD+KPEN+LV   G + L DF
Sbjct: 120 NIIHRDIKPENILVSESGVLKLCDF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
           GI++RDLKP N+ V  D  + + DF L+   DD
Sbjct: 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 13/27 (48%), Positives = 22/27 (81%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 121 VLHRDLKPQNLLINTEGAIKLADFGLA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 43/142 (30%), Positives = 58/142 (40%), Gaps = 43/142 (30%)

Query: 105 VDVRSMSFVGTHE-----YLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE 158
           V VR+     THE     Y APEI+ G + + + VD W+LG    E+      F G D E
Sbjct: 152 VPVRTY----THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSE 206

Query: 159 LTLANIVARALEFPKE----------------------------PAVPATAKDLISQLLA 190
           +     + R L  P E                            P +    +DL+SQ+L 
Sbjct: 207 IDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLH 266

Query: 191 KDPERRLGSTKGASAIKHHPFF 212
            DP +R+ S K A A   HPFF
Sbjct: 267 YDPNKRI-SAKAALA---HPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 18/119 (15%)

Query: 108 RSMSFVGTHEYLAPEIVSGEG-HGSPVDW----WTLGIFLFELFYGVTPFRGVDHELTLA 162
           R  SF+GT  ++APE+V  E    +P D+    W+LGI L E+     P     HEL   
Sbjct: 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP----HHELNPM 221

Query: 163 NIVAR-ALEFPKEPAVPAT----AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
            ++ + A   P   + P+      +D +   L K PE R      A+ +  HPF   V 
Sbjct: 222 RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETR----PSAAQLLEHPFVSSVT 276

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 17/27 (62%), Positives = 21/27 (77%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           IV+RDLKPEN+LV S G + L DF L+
Sbjct: 129 IVHRDLKPENILVTSGGQVKLADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
           ++APE ++     S  D W  G+ ++E+   GV PF+GV +   +  I       P  P 
Sbjct: 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-ENGERLPMPPN 232

Query: 177 VPATAKDLISQLLAKDPERR 196
            P T   L+++  A DP +R
Sbjct: 233 CPPTLYSLMTKCWAYDPSKR 252

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 15/26 (57%), Positives = 21/26 (80%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDF 27
           +GIV+RD+KPEN+LV  DG + + DF
Sbjct: 328 IGIVHRDIKPENLLVTVDGQVKIIDF 353

Length = 507

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 13/105 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + +GT  Y++PE+ S + +    D W LG  ++E+      F   D    + ++V R +E
Sbjct: 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD----MNSLVYRIIE 216

Query: 171 FPKEPAVPATAK----DLISQLLAKDPERRLGSTKGASAIKHHPF 211
             K P +P        +LI+ +L+K PE+R        +I   P+
Sbjct: 217 -GKLPPMPKDYSPELGELIATMLSKRPEKR----PSVKSILRQPY 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP 151
           +D  + SFVGT  Y++PE + G  +    D W++G+ L EL  G  P
Sbjct: 155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 37/132 (28%)

Query: 115 THE-----YLAPEIVSGEGHGS-PVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIV 165
           THE     Y APEI+ G  H S PVD W++G    E+      F G   +D    +  I+
Sbjct: 161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 220

Query: 166 ARALE---------------FPKEP------AVPATAK---DLISQLLAKDPERRLGSTK 201
               E               FPK P       VP       DL+S++L  DP +R+    
Sbjct: 221 GTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI---- 276

Query: 202 GASAIKHHPFFQ 213
            A A   H +F+
Sbjct: 277 TARAALEHEYFK 288

Length = 294

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 15/27 (55%), Positives = 21/27 (77%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
           GI+YRDLK +NV++  DGHI + DF +
Sbjct: 116 GIIYRDLKLDNVMLDRDGHIKIADFGM 142

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
           +VYRDLKP N+L+   GH+ ++  DL L CD S
Sbjct: 118 VVYRDLKPANILLDEHGHVRIS--DLGLACDFS 148

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
           +++RDLKP N+ + ++ ++ L DF L+      +S A+
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK 168

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 38/134 (28%)

Query: 94  QHSGPEFVVEPVDVRSMSFVGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           +H    F+ E        +V T  Y APEI ++ +G+   +D W++G  L E+      F
Sbjct: 159 EHDHTGFLTE--------YVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLF 210

Query: 153 RGVD--HELTL-------------ANIV-ARALEF----PKEPAVP---------ATAKD 183
            G D  H+L L               I+  RA  +    P +P VP           A D
Sbjct: 211 PGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALD 270

Query: 184 LISQLLAKDPERRL 197
           L+ ++L  +P +R+
Sbjct: 271 LLDKMLTFNPHKRI 284

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPAVP 178
           APE  S     +  D W+ GI L+E+F YG  P+ G+++     + +      P     P
Sbjct: 172 APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY-DQITAGYRMPCPAKCP 230

Query: 179 ATAKDLISQLLAKDPERR 196
                ++ +  A +PE R
Sbjct: 231 QEIYKIMLECWAAEPEDR 248

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 39/132 (29%)

Query: 115 THE-----YLAPEIVSGEGHGS-PVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           THE     Y APEI+ G    S PVD W++G    E+      F G D E+     + R 
Sbjct: 157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPG-DSEIDQLFRIFRT 215

Query: 169 L-------------------EFPKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
           L                    FPK                  DL+S++L  DP +R+ S 
Sbjct: 216 LGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI-SA 274

Query: 201 KGASAIKHHPFF 212
           K A     HP+F
Sbjct: 275 KAALQ---HPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           ++  +FVGT  ++APE++    + S  D W+LGI   EL  G  P   + H + +  ++ 
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL-HPMKVLFLIP 214

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERR 196
           +      E       K+ +   L K+P  R
Sbjct: 215 KNNPPTLEGNYSKPLKEFVEACLNKEPSFR 244

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 36/135 (26%)

Query: 108 RSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLAN 163
           RS+S++ +  Y APE++ G   + + +D W+LG  + E+  G   F G   VD  + +  
Sbjct: 226 RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQ 285

Query: 164 IVARALE--------------------------FPKEPAVPATAKDLISQLLAKDPERRL 197
           ++    E                          FPK    P  A + ISQ L  +P +RL
Sbjct: 286 VLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPK--GTPDDAINFISQFLKYEPLKRL 343

Query: 198 GSTKGASAIKHHPFF 212
              +  +     PFF
Sbjct: 344 NPIEALA----DPFF 354

Length = 440

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 33/137 (24%)

Query: 104 PVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           PV+  S + V T  Y AP+++ G   + + +D W++G  + E+  G   F G ++E  L 
Sbjct: 153 PVNTFS-NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL 211

Query: 163 NIV-----------ARALEFPK----------------EPAVPATAKDLISQLLAKDPER 195
            I                + P+                 P       DL+ +LL  +PE 
Sbjct: 212 KIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPEL 271

Query: 196 RLGSTKGASAIKHHPFF 212
           R+ +         HP+F
Sbjct: 272 RISAHDAL----QHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 34/138 (24%)

Query: 104 PVDVRSMSFVGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH----- 157
             D +   +V T  Y APEI ++ + +   VD W+ G    E+  G   F G DH     
Sbjct: 157 IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFS 216

Query: 158 ----------ELTLANIVAR-ALEF----PKEPAVP---------ATAKDLISQLLAKDP 193
                     +  +  I +   L F    PK   VP          +A DL+ ++L  DP
Sbjct: 217 IITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDP 276

Query: 194 ERRLGSTKGASAIKHHPF 211
           ++R+ + +  +    HP+
Sbjct: 277 QKRISAAEALA----HPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 30/120 (25%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           R  +F+GT  ++APE+++ +           D W+LGI   EL  G  P   + H +   
Sbjct: 169 RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM-HPM--- 224

Query: 163 NIVARAL-EFPKEPAVPATAK----------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
               RAL + P+ P  P T K          D IS+ L K+ E+R         +  HPF
Sbjct: 225 ----RALFKIPRNP--PPTLKSPENWSKKFNDFISECLIKNYEQR----PFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLS 30
           +V+RDLKP+N+LV S G I L DF L+
Sbjct: 131 VVHRDLKPQNILVTSSGQIKLADFGLA 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
           GIV+RD+KP N+ +  +G I L DF  ++K
Sbjct: 119 GIVHRDIKPANIFLDHNGVIKLGDFGCAVK 148

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
            +++RD+K +N+L+  DG + L DF
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
           I++RD+KP N+LV S G I L DF +S +  DS +N+
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
           I++RD+KP N+LV S G I L DF +S +  DS +N+
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 161

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 108 RSMSFVGTHEYLAPEIVSGE-GHGSPVDW----WTLGIFLFELFYGVTPFRGVDHELTLA 162
           R  SF+GT  ++APE+V  E     P D+    W+LGI L E+     P     HEL   
Sbjct: 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPP----HHELNPM 214

Query: 163 NIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            ++ + A   P   A P+         L K  E+ + +    + +  HPF
Sbjct: 215 RVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPA 176
           +LAPE V  +   +  D W+ G+ ++E+F  G  PF G+  E  L  + A  LE P    
Sbjct: 184 WLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEG 243

Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAI 206
            P+    L+++  A +P+ R   ++  SA+
Sbjct: 244 CPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPAVP 178
           APE ++   + S  D W+ GI L+E F  G TP+ G+ ++ T    +      P     P
Sbjct: 163 APEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-RERIESGYRMPAPQLCP 221

Query: 179 ATAKDLISQLLAKDPERR 196
                L+ Q  A DPE R
Sbjct: 222 EEIYRLMLQCWAYDPENR 239

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 16/35 (45%), Positives = 25/35 (71%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
           L I++RD+KP N+L+  +G+I L DF +S +  DS
Sbjct: 127 LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 34/138 (24%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGS-PVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           D     +V T  Y APE++    H +  VD W++G  + E+  G   F+G DH   L  I
Sbjct: 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEI 228

Query: 165 VARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPER 195
           +       KE                             P     A +++ ++L  D E 
Sbjct: 229 MKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAES 288

Query: 196 RLGSTKGASAIKHHPFFQ 213
           R+ + +  +    HP+F+
Sbjct: 289 RITAAEALA----HPYFE 302

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK--------CDDSASNAQIISDQ 46
           +G ++RD+KP+N+L+   GH+ L DF   +K        CD +      IS +
Sbjct: 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPE 213

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 18/116 (15%)

Query: 106 DVRSMSFVGTHEYLAPEIVS--GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN 163
           + ++MS  G+  ++APE++    +G+ + VD W+LG  + E+F G  P+   D E   A 
Sbjct: 164 NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS--DEEAIAAM 221

Query: 164 IVARALEFPKEPAVPATAKDLISQLLAK--------DPERRLGSTKGASAIKHHPF 211
                      P +P      +S +           +P+ R      A  +  HPF
Sbjct: 222 FKLGNKR--SAPPIPPDVSMNLSPVALDFLNACFTINPDNR----PTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 12/28 (42%), Positives = 20/28 (71%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            +++RDLKP+N+L+   G + L DF L+
Sbjct: 120 RVLHRDLKPQNLLINKRGELKLADFGLA 147

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 38.2 bits (88), Expect = 0.004
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 105 VDVRSM--SFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           + + SM  S VGT  Y +PE++  E   +    D W LG  ++EL  G TPF   ++   
Sbjct: 192 IGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251

Query: 161 LANIVARALEFP 172
           L + + R  + P
Sbjct: 252 LISELKRGPDLP 263

Length = 1021

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 14/34 (41%), Positives = 25/34 (73%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
           G+++RD+KP N+L+ + G++ L DF +S +  DS
Sbjct: 135 GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y++PE+  G+ +    D W LG  L+EL      F   +    +  I+      P
Sbjct: 162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM-SGTFAP 220

Query: 173 KEPAVPATAKDLISQLLAKDPERR 196
                    + LI  +L  DP +R
Sbjct: 221 ISDRYSPDLRQLILSMLNLDPSKR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 42/138 (30%)

Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFE------LFYGVTPFRGVDHELTL-- 161
            +V T  Y APE++ S   + + +D W++G    E      LF    P +   H+L L  
Sbjct: 170 EYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLF----PGKNYVHQLKLIL 225

Query: 162 ---------------ANIVARALE-FPKEPAVP---------ATAKDLISQLLAKDPERR 196
                          ++ V + ++  P++  VP           A DL+SQ+L  DPE R
Sbjct: 226 SVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEER 285

Query: 197 LGSTKGASAIKHHPFFQG 214
           +   +   A++ HPF   
Sbjct: 286 ITVEQ---ALQ-HPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.98
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.97
KOG0578	550	consensus p21-activated serine/threonine protein k	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.96
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
PTZ00284	467	protein kinase; Provisional	99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.95
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.95
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.95
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.95
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.95
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.95
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.95
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.94
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.94
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.94
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
PHA03209	357	serine/threonine kinase US3; Provisional	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.94
PHA03210	501	serine/threonine kinase US3; Provisional	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.94
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.94
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.94
PHA03211	461	serine/threonine kinase US3; Provisional	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.93
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.93
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.93
KOG0589	426	consensus Serine/threonine protein kinase [General	99.93
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
PHA02988	283	hypothetical protein; Provisional	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.93
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.93
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.93
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.93
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.93
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.93
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.93
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.93
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.93
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.93
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.93
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.93
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.93
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.92
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.92
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.92
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.92
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.92
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.92
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
PHA02882	294	putative serine/threonine kinase; Provisional	99.92
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.92
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.92
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.92
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.92
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.92
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.92
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.92
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.92
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.92
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.91
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.91
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.91
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.91
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.91
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.91
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.91
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.91
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.91
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.91
PLN00009	294	cyclin-dependent kinase A; Provisional	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.91
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.91
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.91
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.91
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.91
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.91
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.91
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.91
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.91
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.91
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.91
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.91
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.91
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.9
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.9
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.9
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.9
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.9
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.9
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.9
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.9
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.9
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.9
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.9
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.9
PLN00181	793	protein SPA1-RELATED; Provisional	99.9
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.9
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.9
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.9
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.9
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.9
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.9
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.9
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.9
KOG0584	632	consensus Serine/threonine protein kinase [General	99.9
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.9
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.9
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.9
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.9
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.89
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.89
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.89
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.89
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.89
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.89
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.89
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.89
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.89
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.89
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.89
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.89
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.89
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.89
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.89
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.89
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.89
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.89
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.88
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.88
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.88
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.88
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.88
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.88
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.88
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.88
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.88
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.88
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.88
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.88
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.88
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.88
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.87
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.87
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.87
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.87
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.87
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.87
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.87
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.86
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.86
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.86
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.86
KOG0586	596	consensus Serine/threonine protein kinase [General	99.86
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.86
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.86
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.86
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.85
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.85
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.85
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.84
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.84
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.84
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.83
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.82
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.82
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.82
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.81
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.76
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.75
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.75
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.72
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.71
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.69
KOG3653	534	consensus Transforming growth factor beta/activin	99.68
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.6
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.6
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.51
KOG1152	772	consensus Signal transduction serine/threonine kin	99.49
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.49
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.49
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.48
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.46
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.39
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.37
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.23
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.18
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.12
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.03
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.92
PRK12274	218	serine/threonine protein kinase; Provisional	98.81
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.8
PRK09188	365	serine/threonine protein kinase; Provisional	98.72
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.7
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.68
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.5
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.04
smart00090	237	RIO RIO-like kinase.	97.87
PRK10345	210	hypothetical protein; Provisional	97.76
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.75
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.55
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.53
PRK14879	211	serine/threonine protein kinase; Provisional	97.53
COG4248	637	Uncharacterized protein with protein kinase and he	97.49
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.46
KOG1243	690	consensus Protein kinase [General function predict	97.38
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.19
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.04
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.97
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.61
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.24
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.22
KOG3087	229	consensus Serine/threonine protein kinase [General	95.96
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.33
PRK05231	319	homoserine kinase; Provisional	94.56
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	94.14
KOG1093	725	consensus Predicted protein kinase (contains TBC a	94.07
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.01
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.97
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.97
PF01636	239	APH: Phosphotransferase enzyme family This family	93.75
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	93.74
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.72
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.3
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.84
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.58
PRK10271	188	thiK thiamine kinase; Provisional	92.36
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	92.06
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.8
COG0661	517	AarF Predicted unusual protein kinase [General fun	91.76
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.33
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	91.29
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	91.09
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	91.05
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	90.17
PRK09902	216	hypothetical protein; Provisional	89.99
PLN02236	344	choline kinase	89.52
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	89.25
COG2334	331	Putative homoserine kinase type II (protein kinase	89.21
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	88.82
KOG0576	829	consensus Mitogen-activated protein kinase kinase	88.7
PRK06148	1013	hypothetical protein; Provisional	88.24
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	86.53
KOG2268	465	consensus Serine/threonine protein kinase [Signal	85.54
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	85.4
PRK11768	325	serine/threonine protein kinase; Provisional	84.55
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	83.77
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	83.02
KOG1235	538	consensus Predicted unusual protein kinase [Genera	82.66
PRK06149	972	hypothetical protein; Provisional	82.64
PRK09550	401	mtnK methylthioribose kinase; Reviewed	81.92
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	80.41

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.2e-41  Score=283.51  Aligned_cols=216  Identities=59%  Similarity=1.100  Sum_probs=169.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      |+|||+|||||+|||+..+|++.|+||.|+...........                 ..+......   .+++.....+
T Consensus       197 mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~-----------------s~~~~~~~~---~~~~~~~~~s  256 (459)
T KOG0610|consen  197 MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK-----------------SSSPRSSGS---QPSCRSRQPS  256 (459)
T ss_pred             hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec-----------------cCCCCCCCC---Cccccccccc
Confidence            68999999999999999999999999999866522111100                 000000000   1111111111


Q ss_pred             ccCc-----ccccc--ccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCC
Q 025601           81 CFRP-----KRKRK--KKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR  153 (250)
Q Consensus        81 ~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~  153 (250)
                      ++..     ..+++  ..........+...+.+.+.++|+||.-|+|||++.|.+++.++|.|+||+++|||+.|..||.
T Consensus       257 ~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFK  336 (459)
T KOG0610|consen  257 CFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFK  336 (459)
T ss_pred             ccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcC
Confidence            1111     11111  1111123334566888999999999999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCC
Q 025601          154 GVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN  233 (250)
Q Consensus       154 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~  233 (250)
                      |.++.+++.+|+.....+|....++..+++||+++|.+||.+|+.+...|.|+..||||++|+|+.+++..||++|.+.+
T Consensus       337 G~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d  416 (459)
T KOG0610|consen  337 GSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVD  416 (459)
T ss_pred             CCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             cCC
Q 025601          234 REL  236 (250)
Q Consensus       234 ~~~  236 (250)
                      -..
T Consensus       417 ~~~  419 (459)
T KOG0610|consen  417 GGL  419 (459)
T ss_pred             cCc
Confidence            654

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.3e-40  Score=286.76  Aligned_cols=214  Identities=37%  Similarity=0.625  Sum_probs=153.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|+|||||||+|+||+..||+||+||||+............. ............   ....+...          ...
T Consensus       259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~----------~~~  324 (550)
T KOG0605|consen  259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR-LDEQMQINLSEA---KPSDFPKF----------NTP  324 (550)
T ss_pred             HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc-chhhhhhhhccC---CCcccccc----------ccc
Confidence            5899999999999999999999999999984433221111000 000000000000   00000000          000


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                      ....+....-.....        ..-.-..+.+|||-|||||++.+.+|+..+|+||||||+||||.|.+||.+.+..++
T Consensus       325 ~~~~~~~~~~~~w~~--------nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T  396 (550)
T KOG0605|consen  325 RSTMSRREQLQTWKR--------NRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET  396 (550)
T ss_pred             cchhhHHHHHHHHHh--------hhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            000000000000000        011112356899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCcCCCC
Q 025601          161 LANIVARA--LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVS  238 (250)
Q Consensus       161 ~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (250)
                      ..+|+...  ..+|....++.++.+||.+||. ||++|.. ...++||..||||++|+|+++....+||+|+..+.....
T Consensus       397 ~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF~~v~W~~l~~~~apfvP~v~~~~DT~  474 (550)
T KOG0605|consen  397 YRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFFKGVDWDHLREMPAPFVPQVNSELDTQ  474 (550)
T ss_pred             HHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCccccCCcchhhcCCCCCCCCCCCccccc
Confidence            99999866  6788888899999999999999 9999999 777999999999999999999999999999998766554

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-39  Score=276.38  Aligned_cols=180  Identities=40%  Similarity=0.688  Sum_probs=150.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++++||.|||.|+.+............                                   
T Consensus       192 ~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~-----------------------------------  236 (604)
T KOG0592|consen  192 SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVD-----------------------------------  236 (604)
T ss_pred             hcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccC-----------------------------------
Confidence            479999999999999999999999999999888765433220000                                   


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                           ......+..+|+||..|.+||++.....+..+|+|+|||++|+|++|++||.+.+....
T Consensus       237 ---------------------~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli  295 (604)
T KOG0592|consen  237 ---------------------PNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI  295 (604)
T ss_pred             ---------------------cccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH
Confidence                                 00011123478999999999999999899999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE  240 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (250)
                      +.+|++..+.+|.  ..++.+.+||.++|..||.+|+|    +.+|.+||||++|+|..|+..+||.+-+=..-...+.+
T Consensus       296 FqkI~~l~y~fp~--~fp~~a~dLv~KLLv~dp~~Rlt----~~qIk~HpFF~~Vdw~nlw~~~PP~l~py~p~~~~s~e  369 (604)
T KOG0592|consen  296 FQKIQALDYEFPE--GFPEDARDLIKKLLVRDPSDRLT----SQQIKAHPFFEGVDWENLWQQTPPKLQPYKPATSISPE  369 (604)
T ss_pred             HHHHHHhcccCCC--CCCHHHHHHHHHHHccCcccccc----HHHHhhCcccccCChhhhhhcCCCcccCCCCcccCCcc
Confidence            9999999888766  79999999999999999999999    99999999999999999999999887655433333433


Q ss_pred             CC
Q 025601          241 SC  242 (250)
Q Consensus       241 ~~  242 (250)
                      ++
T Consensus       370 ~~  371 (604)
T KOG0592|consen  370 YY  371 (604)
T ss_pred             cC
Confidence            33

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-39  Score=265.41  Aligned_cols=171  Identities=43%  Similarity=0.778  Sum_probs=145.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|+++|+||||++......                                           
T Consensus       143 ~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-------------------------------------------  179 (357)
T KOG0598|consen  143 SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-------------------------------------------  179 (357)
T ss_pred             hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-------------------------------------------
Confidence            4799999999999999999999999999997644322                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ..+.+++||+-|||||++.+.+|+.++|.||||+++|+|++|..||.+.+....
T Consensus       180 --------------------------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~  233 (357)
T KOG0598|consen  180 --------------------------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM  233 (357)
T ss_pred             --------------------------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH
Confidence                                      123357999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELVS  238 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  238 (250)
                      ..+|++.....+ +.-.+.++++|+.++|++||.+|......++++..||||++++|..+  ++..||+.|.-.+.+..+
T Consensus       234 ~~~I~~~k~~~~-p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~~~  312 (357)
T KOG0598|consen  234 YDKILKGKLPLP-PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLEDTS  312 (357)
T ss_pred             HHHHhcCcCCCC-CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCccccc
Confidence            999887763322 22389999999999999999999976677999999999999999976  567788877776665555


Q ss_pred             CCC
Q 025601          239 DES  241 (250)
Q Consensus       239 ~~~  241 (250)
                      +.|
T Consensus       313 ~Fd  315 (357)
T KOG0598|consen  313 NFD  315 (357)
T ss_pred             ccc
Confidence            444

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=274.95  Aligned_cols=173  Identities=39%  Similarity=0.769  Sum_probs=149.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||||||||.+|||++.+|++||+||||++.....                                            
T Consensus       486 ~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~--------------------------------------------  521 (694)
T KOG0694|consen  486 ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ--------------------------------------------  521 (694)
T ss_pred             hcCceeeecchhheEEcccCcEEecccccccccCCC--------------------------------------------
Confidence            479999999999999999999999999999774432                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               +.++..|+||+.|||||++.+..|+.++|.||||+++|||+.|+.||.|.+..++
T Consensus       522 -------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~  576 (694)
T KOG0694|consen  522 -------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV  576 (694)
T ss_pred             -------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence                                     2245578999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELV  237 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~  237 (250)
                      ...|+......|.  .++.++.++|+++|+++|++|+.+. .+++++..||||+.++|..|  +.++|||+|..-++   
T Consensus       577 FdsI~~d~~~yP~--~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~---  651 (694)
T KOG0694|consen  577 FDSIVNDEVRYPR--FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGP---  651 (694)
T ss_pred             HHHHhcCCCCCCC--cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCCh---
Confidence            9999988777665  7999999999999999999999974 46899999999999999988  45667777766555   


Q ss_pred             CCCCCCCCCccC
Q 025601          238 SDESCPETPVEY  249 (250)
Q Consensus       238 ~~~~~~~~~~~~  249 (250)
                        +|++++..||
T Consensus       652 --~D~snFd~eF  661 (694)
T KOG0694|consen  652 --EDVSNFDEEF  661 (694)
T ss_pred             --hhhcccchhh
Confidence              4555555444

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=238.99  Aligned_cols=157  Identities=41%  Similarity=0.855  Sum_probs=141.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +++||+|||||+|||++.+|++||.|||.++....                                             
T Consensus       162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---------------------------------------------  196 (355)
T KOG0616|consen  162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---------------------------------------------  196 (355)
T ss_pred             hcCeeeccCChHHeeeccCCcEEEEeccceEEecC---------------------------------------------
Confidence            47899999999999999999999999999866433                                             


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ++...+|||-|+|||++...+|+.++|.||||+++|||+.|.+||.+......
T Consensus       197 ---------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i  249 (355)
T KOG0616|consen  197 ---------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI  249 (355)
T ss_pred             ---------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH
Confidence                                       23346899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCC-CccChHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t-~~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      +.+|+++...+|.  -++.++++||.++|+.|-.+|.. .....+++.+||||++++|..+  +++.+|+.|+.
T Consensus       250 Y~KI~~~~v~fP~--~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~  321 (355)
T KOG0616|consen  250 YEKILEGKVKFPS--YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPN  321 (355)
T ss_pred             HHHHHhCcccCCc--ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCcc
Confidence            9999999998877  58999999999999999999965 3347899999999999999876  67899999943

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-35  Score=244.20  Aligned_cols=141  Identities=34%  Similarity=0.505  Sum_probs=119.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +++||||||||+|||+.+.|.+||||||.++....+                                            
T Consensus       197 ~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--------------------------------------------  232 (364)
T KOG0581|consen  197 ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--------------------------------------------  232 (364)
T ss_pred             ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--------------------------------------------
Confidence            378999999999999999999999999987554332                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~-----  155 (250)
                                                 -..+++||..|||||.+.+..|+.++||||||++++|+++|++||...     
T Consensus       233 ---------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~  285 (364)
T KOG0581|consen  233 ---------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYL  285 (364)
T ss_pred             ---------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCC
Confidence                                       122578999999999999999999999999999999999999999874     


Q ss_pred             ChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          156 DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..-+.+..|+.+..+-.....+++++.+||..||++||.+|++    +.+|++|||++...
T Consensus       286 ~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s----~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  286 DIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPS----AKQLLQHPFIKKFE  342 (364)
T ss_pred             CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCC----HHHHhcCHHHhhcc
Confidence            4556677777655443222359999999999999999999999    99999999999543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-34  Score=243.19  Aligned_cols=143  Identities=33%  Similarity=0.543  Sum_probs=120.5

Q ss_pred             CccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +.||+||||||+|||+..+   ..+||.|||+|+....-                                         
T Consensus       294 ~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~-----------------------------------------  332 (475)
T KOG0615|consen  294 SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG-----------------------------------------  332 (475)
T ss_pred             HcCcccccCCcceEEeccCCcceEEEecccchhhccccc-----------------------------------------
Confidence            3699999999999999765   78999999999765421                                         


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC---CCchhHHHHHHHHHHHHHhCCCCCCC
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRG  154 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~vl~elltg~~pf~~  154 (250)
                                                   .....++||+.|.|||++.+.+   +..++|+||+||++|.+++|.+||++
T Consensus       333 -----------------------------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~  383 (475)
T KOG0615|consen  333 -----------------------------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE  383 (475)
T ss_pred             -----------------------------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence                                         1223469999999999998765   35588999999999999999999998


Q ss_pred             CChHH-HHHHHHHhccCCC--CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          155 VDHEL-TLANIVARALEFP--KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       155 ~~~~~-~~~~i~~~~~~~p--~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ..... ...+|.++.+.+.  .-..++++..+||.+||..||++||+    +.++|+||||+.++.
T Consensus       384 ~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s----~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  384 EYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS----ADEALNHPWFKDAPC  445 (475)
T ss_pred             ccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC----HHHHhcChhhhcccc
Confidence            76555 7777888776644  33568999999999999999999999    999999999997764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.5e-34  Score=230.19  Aligned_cols=142  Identities=31%  Similarity=0.546  Sum_probs=120.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++++|||||||+|||++.+|.+||||||.|+........-.                                       
T Consensus       119 k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT---------------------------------------  159 (396)
T KOG0593|consen  119 KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT---------------------------------------  159 (396)
T ss_pred             hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh---------------------------------------
Confidence            36899999999999999999999999999976553222111                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                    -.+.|.+|+|||.+.| ..|+.++||||+||++.||++|...|+|.++.+
T Consensus       160 ------------------------------DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD  209 (396)
T KOG0593|consen  160 ------------------------------DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID  209 (396)
T ss_pred             ------------------------------hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence                                          1367899999999998 569999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCC-----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~-----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ++..|.+..+.....                             +.++..+.+|+++||+.||++|++    -+++|+|+
T Consensus       210 QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s----c~qll~H~  285 (396)
T KOG0593|consen  210 QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS----CEQLLHHP  285 (396)
T ss_pred             HHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc----HHHHhcCh
Confidence            999988765543321                             345567899999999999999999    99999999


Q ss_pred             CCCCC
Q 025601          211 FFQGV  215 (250)
Q Consensus       211 ~~~~~  215 (250)
                      ||++.
T Consensus       286 yFd~~  290 (396)
T KOG0593|consen  286 YFDGF  290 (396)
T ss_pred             HHHHH
Confidence            99654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.5e-33  Score=244.06  Aligned_cols=139  Identities=33%  Similarity=0.612  Sum_probs=126.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||||||||..|+|++.+.++||+|||||.......                                           
T Consensus       136 ~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-------------------------------------------  172 (592)
T KOG0575|consen  136 SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-------------------------------------------  172 (592)
T ss_pred             hcCceecccchhheeecCcCcEEecccceeeeecCcc-------------------------------------------
Confidence            4799999999999999999999999999995544321                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                .+...++|||.|+|||++...+++..+||||+|||+|.||.|++||....-.+.
T Consensus       173 --------------------------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket  226 (592)
T KOG0575|consen  173 --------------------------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET  226 (592)
T ss_pred             --------------------------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH
Confidence                                      123357999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.+|....+.+|.  .++.++++||.+||+.||.+|||    ++++|.|+||+.
T Consensus       227 y~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rps----l~~vL~h~Ff~~  274 (592)
T KOG0575|consen  227 YNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPS----LDEVLDHPFFKS  274 (592)
T ss_pred             HHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCC----HHHHhcCHhhhC
Confidence            9999999888877  79999999999999999999999    999999999943

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.2e-32  Score=228.31  Aligned_cols=161  Identities=30%  Similarity=0.480  Sum_probs=135.8

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||.|+|++.+ |.+||||||.|+.......                                         
T Consensus       143 ~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep-----------------------------------------  181 (364)
T KOG0658|consen  143 SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP-----------------------------------------  181 (364)
T ss_pred             hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC-----------------------------------------
Confidence            3799999999999999976 9999999999876543321                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   +.+...|..|+|||.+.|+. |+.+.||||.|||++||+-|+..|.|.+..
T Consensus       182 -----------------------------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~  232 (364)
T KOG0658|consen  182 -----------------------------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV  232 (364)
T ss_pred             -----------------------------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence                                         12456789999999999976 899999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCC---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +++..|++-.+.....                           ..+++++.+|+.++|+++|.+|.+    +.+++.|||
T Consensus       233 dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~----~~~~l~h~f  308 (364)
T KOG0658|consen  233 DQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS----ALEALAHPF  308 (364)
T ss_pred             HHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC----HHHHhcchh
Confidence            9998887644332211                           456789999999999999999999    999999999


Q ss_pred             CCCCCccccccCCCCCCCCCCCcC
Q 025601          212 FQGVNWALLRCTTPPFVPPPFNRE  235 (250)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~  235 (250)
                      |....-..........+|+.|+-.
T Consensus       309 Fdelr~~~~~l~~g~~lp~lf~f~  332 (364)
T KOG0658|consen  309 FDELRDPNTKLPNGRPLPPLFNFK  332 (364)
T ss_pred             hHHhhCcCccCcCCCcCCCccCch
Confidence            999887777777777889888743

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=4.8e-32  Score=238.72  Aligned_cols=144  Identities=33%  Similarity=0.568  Sum_probs=125.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .+|+||||||+|+|++..+.+||+|||+|-....-.                                            
T Consensus       131 ~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk--------------------------------------------  166 (786)
T KOG0588|consen  131 FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK--------------------------------------------  166 (786)
T ss_pred             hcceeccCCchhhhhhcccCEeeeccceeecccCCc--------------------------------------------
Confidence            589999999999999999889999999983211110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                --..-||+++|.|||++.|.+| +.++||||.|+|||.|++|+.||.+.+....
T Consensus       167 --------------------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L  220 (786)
T KOG0588|consen  167 --------------------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL  220 (786)
T ss_pred             --------------------------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence                                      0012379999999999999997 8999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      +.++..+.+.+|  .+++.++++||.+||..||++|+|    .++++.|||+.+..-....
T Consensus       221 LlKV~~G~f~MP--s~Is~eaQdLLr~ml~VDp~~RiT----~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  221 LLKVQRGVFEMP--SNISSEAQDLLRRMLDVDPSTRIT----TEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             HHHHHcCcccCC--CcCCHHHHHHHHHHhccCcccccc----HHHHhhCchhhcCCCCChh
Confidence            999988888887  589999999999999999999999    9999999999986644333

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-32  Score=224.92  Aligned_cols=145  Identities=28%  Similarity=0.436  Sum_probs=118.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      |.||+||||||.|++++.++.+|++|||||+..... ...                                        
T Consensus       143 SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~----------------------------------------  181 (359)
T KOG0660|consen  143 SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FED----------------------------------------  181 (359)
T ss_pred             cccccccccchhheeeccCCCEEeccccceeecccc-Ccc----------------------------------------
Confidence            468999999999999999999999999999665432 100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ......+.|.+|+|||++.. ..|+.++||||+||+++||++|+..|.|.+...
T Consensus       182 --------------------------~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~  235 (359)
T KOG0660|consen  182 --------------------------GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVH  235 (359)
T ss_pred             --------------------------cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHH
Confidence                                      01123478999999999876 459999999999999999999999999998777


Q ss_pred             HHHHHHHhccCCCCC-----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~-----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ++..|++..+.....                             ++.++.+.+|+.+||.+||.+|+|    |+++|.||
T Consensus       236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit----a~eAL~hP  311 (359)
T KOG0660|consen  236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT----AEEALAHP  311 (359)
T ss_pred             HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC----HHHHhcCh
Confidence            777766544332211                             456788999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      |+....
T Consensus       312 Yl~~~h  317 (359)
T KOG0660|consen  312 YLAPYH  317 (359)
T ss_pred             hhhhhc
Confidence            999853

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=7.1e-32  Score=213.18  Aligned_cols=140  Identities=36%  Similarity=0.647  Sum_probs=123.7

Q ss_pred             ccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      .||||||+||+|+++.+.   ..+||+|||++.......                                         
T Consensus       129 n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~-----------------------------------------  167 (355)
T KOG0033|consen  129 NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE-----------------------------------------  167 (355)
T ss_pred             cCceeccCChhheeeeeccCCCceeecccceEEEeCCcc-----------------------------------------
Confidence            589999999999999743   458999999996655211                                         


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   -..+++|||+|||||++...+|+..+|||+.|++||-|+.|..||.+.+..
T Consensus       168 -----------------------------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  168 -----------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  218 (355)
T ss_pred             -----------------------------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence                                         111468999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ..+++|+++...++.+  ..+++++++|+++||..||++|+|    |.|+|+|||+++.
T Consensus       219 rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt----a~EAL~HpWi~~r  273 (355)
T KOG0033|consen  219 RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT----ADEALKHPWICNR  273 (355)
T ss_pred             HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc----HHHHhCCchhcch
Confidence            9999999988876663  678999999999999999999999    9999999999975

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.8e-32  Score=248.95  Aligned_cols=170  Identities=43%  Similarity=0.795  Sum_probs=144.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|+|||||||+||||+..||+||+|||.+..+...+.                                          
T Consensus       193 ~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~------------------------------------------  230 (1317)
T KOG0612|consen  193 SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT------------------------------------------  230 (1317)
T ss_pred             hccceeccCCcceeEecccCcEeeccchhHHhcCCCCc------------------------------------------
Confidence            47999999999999999999999999998866553211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                .....-+|||-|++||++..     +.|+.-+|.||+|+++|||+.|..||...
T Consensus       231 --------------------------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  231 --------------------------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD  284 (1317)
T ss_pred             --------------------------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence                                      01112379999999999963     34899999999999999999999999999


Q ss_pred             ChHHHHHHHHHh--ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCC
Q 025601          156 DHELTLANIVAR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN  233 (250)
Q Consensus       156 ~~~~~~~~i~~~--~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~  233 (250)
                      +..+++.+|+.-  .+.||....+|.++++||.+++.- |..|.. ..+++++..||||.+++|..++...||++|..-+
T Consensus       285 slveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~-~e~RLg-rngiedik~HpFF~g~~W~~iR~~~pP~vPevss  362 (1317)
T KOG0612|consen  285 SLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCD-REVRLG-RNGIEDIKNHPFFEGIDWDNIRESVPPVVPEVSS  362 (1317)
T ss_pred             HHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcC-hhhhcc-cccHHHHHhCccccCCChhhhhhcCCCCCCcCCC
Confidence            999999999865  677887778999999999988765 788887 4559999999999999999999999999998877


Q ss_pred             cCCCCCC
Q 025601          234 RELVSDE  240 (250)
Q Consensus       234 ~~~~~~~  240 (250)
                      +..-++.
T Consensus       363 d~DTsnF  369 (1317)
T KOG0612|consen  363 DDDTSNF  369 (1317)
T ss_pred             CCccccc
Confidence            6666655

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=9e-32  Score=230.32  Aligned_cols=159  Identities=40%  Similarity=0.760  Sum_probs=127.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       113 ~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~------------------------------------------  150 (323)
T cd05571         113 SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------  150 (323)
T ss_pred             hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....++||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus       151 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~  203 (323)
T cd05571         151 ---------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  203 (323)
T ss_pred             ---------------------------cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH
Confidence                                       01124689999999999998899999999999999999999999998877777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCccccc--cCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLR--CTTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~  230 (250)
                      ...+......++  ..++.++.+||.+||+.||++|++... .+.+++.||||.+++|..+.  ...+|+.|.
T Consensus       204 ~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~  274 (323)
T cd05571         204 FELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQ  274 (323)
T ss_pred             HHHHHcCCCCCC--CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence            666665554443  468999999999999999999994221 39999999999999998764  344555443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.7e-31  Score=228.36  Aligned_cols=168  Identities=37%  Similarity=0.715  Sum_probs=134.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  151 (320)
T cd05590         114 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK------------------------------------------  151 (320)
T ss_pred             HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~  204 (320)
T cd05590         152 ---------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL  204 (320)
T ss_pred             ---------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH
Confidence                                       01123689999999999988899999999999999999999999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc--ChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK--GASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNREL  236 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~--~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~  236 (250)
                      ...+.......+  ..++.++.+||.+||+.||++|++..+  ..++++.||||++++|..+  ...+||+.|....++.
T Consensus       205 ~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (320)
T cd05590         205 FEAILNDEVVYP--TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSRED  282 (320)
T ss_pred             HHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcch
Confidence            777766544433  468999999999999999999999432  2389999999999999876  3456777777655444


Q ss_pred             CCC
Q 025601          237 VSD  239 (250)
Q Consensus       237 ~~~  239 (250)
                      .++
T Consensus       283 ~~~  285 (320)
T cd05590         283 VSN  285 (320)
T ss_pred             hhh
Confidence            443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.8e-31  Score=223.26  Aligned_cols=160  Identities=38%  Similarity=0.787  Sum_probs=139.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||+||||.+|||++.+|++||.|||+++.-....                                           
T Consensus       468 ~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~-------------------------------------------  504 (683)
T KOG0696|consen  468 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG-------------------------------------------  504 (683)
T ss_pred             cCCeeeeeccccceEeccCCceEeeecccccccccCC-------------------------------------------
Confidence            4799999999999999999999999999986633221                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ..+..|+||+.|+|||++...+|+.++|.||+|++||||+.|+.||.|.+..++
T Consensus       505 --------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el  558 (683)
T KOG0696|consen  505 --------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL  558 (683)
T ss_pred             --------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence                                      123357999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      +..|++.....|.  .+|.++.++....|.+.|.+|+.... .-+++..||||+.++|..+  +++.||+-|..
T Consensus       559 F~aI~ehnvsyPK--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~  630 (683)
T KOG0696|consen  559 FQAIMEHNVSYPK--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKI  630 (683)
T ss_pred             HHHHHHccCcCcc--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCcc
Confidence            9999988877766  69999999999999999999998663 4578999999999999987  45666666665

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-31  Score=228.83  Aligned_cols=171  Identities=40%  Similarity=0.708  Sum_probs=149.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .+|||+|||||+|++++.+|.+||.|||.|+.+....                                           
T Consensus       538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~-------------------------------------------  574 (732)
T KOG0614|consen  538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR-------------------------------------------  574 (732)
T ss_pred             hcCceeccCChhheeeccCCceEEeehhhHHHhccCC-------------------------------------------
Confidence            4799999999999999999999999999997765432                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ++-.|+||+-|.|||++...+++.++|.||||+++|||++|.+||++.+...+
T Consensus       575 ---------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt  627 (732)
T KOG0614|consen  575 ---------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT  627 (732)
T ss_pred             ---------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence                                       33358999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCccccc--cCCCCCCCCCCCcCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALLR--CTTPPFVPPPFNRELV  237 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~  237 (250)
                      +..|+++.-.+..+..++..+.+||+++...+|.+|+.. ...+.++..|-||.+.||..|+  ..+||++|+.-++..+
T Consensus       628 Yn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~  707 (732)
T KOG0614|consen  628 YNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDV  707 (732)
T ss_pred             HHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccc
Confidence            999988776666667899999999999999999999983 3568999999999999998764  4778888888777777


Q ss_pred             CCCC
Q 025601          238 SDES  241 (250)
Q Consensus       238 ~~~~  241 (250)
                      ++.|
T Consensus       708 s~Fd  711 (732)
T KOG0614|consen  708 SNFD  711 (732)
T ss_pred             hhcc
Confidence            6544

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-31  Score=223.30  Aligned_cols=160  Identities=44%  Similarity=0.786  Sum_probs=130.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.....                                            
T Consensus       119 ~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~--------------------------------------------  154 (291)
T cd05612         119 SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR--------------------------------------------  154 (291)
T ss_pred             HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--------------------------------------------
Confidence            469999999999999999999999999987443210                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       155 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~  206 (291)
T cd05612         155 ----------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI  206 (291)
T ss_pred             ----------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                        0013588999999999988899999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCC-CccChHHHhcCCCCCCCCccccc--cCCCCCCCCCCCc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG-STKGASAIKHHPFFQGVNWALLR--CTTPPFVPPPFNR  234 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t-~~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~  234 (250)
                      ...+......++  ..++..+.+||.+||+.||++|++ +...+++++.||||..++|..+.  ...+|.+|+.-..
T Consensus       207 ~~~i~~~~~~~~--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~  281 (291)
T cd05612         207 YEKILAGKLEFP--RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHD  281 (291)
T ss_pred             HHHHHhCCcCCC--ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCc
Confidence            777776655544  357899999999999999999995 33459999999999999998653  4456666654333

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-31  Score=223.96  Aligned_cols=141  Identities=35%  Similarity=0.527  Sum_probs=120.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .+|+.|||+||+|||+.....+||+|||||+.......-.                                        
T Consensus       128 k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT----------------------------------------  167 (538)
T KOG0661|consen  128 KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT----------------------------------------  167 (538)
T ss_pred             hcCcccccCChhheEecccceeEecccccccccccCCCcc----------------------------------------
Confidence            3799999999999999999999999999998765542111                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                    ..+.|.+|+|||++.... |+.++||||+|||++|+.+-+..|+|.+..+
T Consensus       168 ------------------------------eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D  217 (538)
T KOG0661|consen  168 ------------------------------EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID  217 (538)
T ss_pred             ------------------------------hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH
Confidence                                          247899999999998766 8999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCC----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEFPKE----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ++.+|+.-.+.....                            ...+.++.++|.+||.+||++|||    |.++|+|||
T Consensus       218 qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT----A~~al~~pf  293 (538)
T KOG0661|consen  218 QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT----ASQALQHPF  293 (538)
T ss_pred             HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc----HHHHhcCcc
Confidence            999988754432221                            447788999999999999999999    999999999


Q ss_pred             CCCC
Q 025601          212 FQGV  215 (250)
Q Consensus       212 ~~~~  215 (250)
                      |+.-
T Consensus       294 fq~~  297 (538)
T KOG0661|consen  294 FQVG  297 (538)
T ss_pred             cccc
Confidence            9953

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=231.93  Aligned_cols=140  Identities=31%  Similarity=0.551  Sum_probs=120.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||||||||.+|||+..+|.+||+|||++........                                           
T Consensus       388 ~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-------------------------------------------  424 (550)
T KOG0578|consen  388 RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-------------------------------------------  424 (550)
T ss_pred             cceeeeccccceeEeccCCcEEEeeeeeeeccccccC-------------------------------------------
Confidence            6999999999999999999999999999855433221                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ...+++||+.|||||++....|+.++||||||++++||+.|++||-..+....+
T Consensus       425 --------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl  478 (550)
T KOG0578|consen  425 --------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  478 (550)
T ss_pred             --------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence                                      122468999999999999999999999999999999999999999887777777


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..|...+. .+.....++..+++||.+||+.|+++|++    |.+||+||||+.
T Consensus       479 yLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras----A~eLL~HpFl~~  528 (550)
T KOG0578|consen  479 YLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS----AKELLEHPFLKM  528 (550)
T ss_pred             HHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC----HHHHhcChhhhh
Confidence            66665443 35556789999999999999999999999    999999999964

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=227.05  Aligned_cols=160  Identities=38%  Similarity=0.716  Sum_probs=133.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .+||+|||||+|||+|..|++.|+|+|||..+....                                            
T Consensus       306 ~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~--------------------------------------------  341 (591)
T KOG0986|consen  306 RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK--------------------------------------------  341 (591)
T ss_pred             cceeeccCChhheeeccCCCeEeeccceEEecCCCC--------------------------------------------
Confidence            589999999999999999999999999985544321                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE---  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~---  158 (250)
                                                ...+.+||..|||||++....|+...|.|||||++|||+.|+.||......   
T Consensus       342 --------------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~  395 (591)
T KOG0986|consen  342 --------------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR  395 (591)
T ss_pred             --------------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH
Confidence                                      111347999999999999999999999999999999999999999765422   


Q ss_pred             HHHHHH-HHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          159 LTLANI-VARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       159 ~~~~~i-~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      +.+.+. +......+  ..+++++++|...+|++||++|+.+. +.+.++.+||||+.+||.++  ...+||++|.|.-
T Consensus       396 eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~a  472 (591)
T KOG0986|consen  396 EEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGA  472 (591)
T ss_pred             HHHHHHHhcchhhcc--cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccc
Confidence            233333 33222333  57899999999999999999999988 78999999999999999987  5589999999953

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.9e-31  Score=214.33  Aligned_cols=126  Identities=29%  Similarity=0.454  Sum_probs=110.6

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccccC
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR   83 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (250)
                      |+||||||.|||++.+|.+||+||||++.......+.                                           
T Consensus       149 VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA-------------------------------------------  185 (375)
T KOG0591|consen  149 VMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFA-------------------------------------------  185 (375)
T ss_pred             eeeccCcchheEEcCCCceeeccchhHhHhcchhHHH-------------------------------------------
Confidence            8999999999999999999999999998766554332                                           


Q ss_pred             ccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 025601           84 PKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN  163 (250)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~  163 (250)
                                                .+++|||.||+||.+.+.+|+.++||||+||++|||.+-+.||.|.+-.+...+
T Consensus       186 --------------------------~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~K  239 (375)
T KOG0591|consen  186 --------------------------HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKK  239 (375)
T ss_pred             --------------------------HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHH
Confidence                                      257999999999999999999999999999999999999999999977777777


Q ss_pred             HHHhccCCCCCCCCChHHHHHHHHhcccCccccCC
Q 025601          164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       164 i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      |..+..+......+|.++..||..|+..|+..||+
T Consensus       240 I~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  240 IEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             HHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            76665442333678999999999999999999998

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=3.3e-31  Score=222.89  Aligned_cols=160  Identities=34%  Similarity=0.669  Sum_probs=124.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       120 ~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  157 (285)
T cd05631         120 RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET------------------------------------------  157 (285)
T ss_pred             hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe------------------------------------------
Confidence            36999999999999999999999999998744221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||..|+|||++.+..++.++||||+||++|+|++|+.||.+......
T Consensus       158 ----------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~  209 (285)
T cd05631         158 ----------------------------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK  209 (285)
T ss_pred             ----------------------------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh
Confidence                                        0013588999999999998899999999999999999999999987654322


Q ss_pred             HHHHHH--hccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCccccccC--CCCCCCC
Q 025601          161 LANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLRCT--TPPFVPP  230 (250)
Q Consensus       161 ~~~i~~--~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~~~--~~~~~~~  230 (250)
                      ...+..  ..........++..+.+|+.+||+.||++|+++.+ .+++++.||||++++|..+...  +||+.|-
T Consensus       210 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         210 REEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             HHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence            222221  11222334468999999999999999999997543 4899999999999999988664  6676664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=5.7e-31  Score=225.31  Aligned_cols=160  Identities=42%  Similarity=0.792  Sum_probs=131.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       114 ~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  151 (323)
T cd05575         114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK------------------------------------------  151 (323)
T ss_pred             HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  204 (323)
T cd05575         152 ---------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM  204 (323)
T ss_pred             ---------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH
Confidence                                       00123689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc--cCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR--CTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~  231 (250)
                      ...+.......  ...++..+.+||.+||+.||++|++..+.+.+++.||||..++|..+.  ...+|+.|..
T Consensus       205 ~~~i~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd05575         205 YDNILNKPLRL--KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPNV  275 (323)
T ss_pred             HHHHHcCCCCC--CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCC
Confidence            77776654443  346799999999999999999999977778999999999999998764  3455655544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=1.4e-30  Score=223.05  Aligned_cols=160  Identities=39%  Similarity=0.770  Sum_probs=131.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       119 ~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  156 (324)
T cd05589         119 ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD------------------------------------------  156 (324)
T ss_pred             hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC------------------------------------------
Confidence            36999999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....+.||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       157 ---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~  209 (324)
T cd05589         157 ---------------------------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV  209 (324)
T ss_pred             ---------------------------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       01124689999999999988899999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      ...+.......+  ..++..+.+||.+||+.||++||++.+ .+.+++.||||++++|..+  ....+|++|..
T Consensus       210 ~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~  281 (324)
T cd05589         210 FDSIVNDEVRYP--RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTI  281 (324)
T ss_pred             HHHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCC
Confidence            777776655444  468999999999999999999997654 4999999999999999865  34556666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=9.2e-31  Score=223.47  Aligned_cols=158  Identities=37%  Similarity=0.769  Sum_probs=126.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.......                                          
T Consensus       114 ~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  151 (316)
T cd05620         114 SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN------------------------------------------  151 (316)
T ss_pred             HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC------------------------------------------
Confidence            36999999999999999999999999998743111000                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~  204 (316)
T cd05620         152 ---------------------------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL  204 (316)
T ss_pred             ---------------------------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       01123689999999999998899999999999999999999999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccCh-HHHhcCCCCCCCCccccc--cCCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR--CTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a-~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~  233 (250)
                      ...+.......  +..++.++.+||.+||+.||++|++    + +++++||||+.++|..+.  ..++|+.|....
T Consensus       205 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dP~~R~~----~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~  274 (316)
T cd05620         205 FESIRVDTPHY--PRWITKESKDILEKLFERDPTRRLG----VVGNIRGHPFFKTINWTALEKRELDPPFKPKVKS  274 (316)
T ss_pred             HHHHHhCCCCC--CCCCCHHHHHHHHHHccCCHHHcCC----ChHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCC
Confidence            66665444333  3368899999999999999999999    6 589999999999998753  345666665433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=4.5e-31  Score=227.63  Aligned_cols=160  Identities=41%  Similarity=0.781  Sum_probs=131.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.....                                            
T Consensus       149 ~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~--------------------------------------------  184 (340)
T PTZ00426        149 SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR--------------------------------------------  184 (340)
T ss_pred             HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--------------------------------------------
Confidence            369999999999999999999999999988543210                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus       185 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~  236 (340)
T PTZ00426        185 ----------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI  236 (340)
T ss_pred             ----------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH
Confidence                                        0023588999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCccccc--cCCCCCCCCCCCc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALLR--CTTPPFVPPPFNR  234 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~  234 (250)
                      ...+......+|  ..++..+.++|.+||+.||++|++. .+.+++++.||||.+++|..+.  ...+|+.|...+.
T Consensus       237 ~~~i~~~~~~~p--~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~  311 (340)
T PTZ00426        237 YQKILEGIIYFP--KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNV  311 (340)
T ss_pred             HHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCC
Confidence            777766655444  4689999999999999999999731 2349999999999999998764  5667888876543

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.8e-30  Score=221.24  Aligned_cols=190  Identities=53%  Similarity=0.981  Sum_probs=143.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++..................               ..                
T Consensus       122 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~---------------~~----------------  170 (316)
T cd05574         122 LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGS---------------RR----------------  170 (316)
T ss_pred             CCeeccCCChHHeEEcCCCCEEEeecchhhccccccccccccccccc---------------cc----------------
Confidence            68999999999999999999999999988654322110000000000               00                


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                               .....................++||..|+|||++.+..++.++|||||||++|+|++|..||.+......+
T Consensus       171 ---------~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~  241 (316)
T cd05574         171 ---------SSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETF  241 (316)
T ss_pred             ---------ccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHH
Confidence                     00000000111111122223457899999999999888999999999999999999999999998888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP  231 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~  231 (250)
                      .++......++....++..+.+||.+||..+|++||++...++++|.||||++.+|+.+...++|.+|.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  311 (316)
T cd05574         242 SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP  311 (316)
T ss_pred             HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCc
Confidence            8777766666665567999999999999999999999999999999999999999999999888988876

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=7.3e-31  Score=225.29  Aligned_cols=147  Identities=41%  Similarity=0.819  Sum_probs=123.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.....                                            
T Consensus       136 ~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------------------------------------------  171 (329)
T PTZ00263        136 SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR--------------------------------------------  171 (329)
T ss_pred             HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC--------------------------------------------
Confidence            369999999999999999999999999987543211                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       172 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  223 (329)
T PTZ00263        172 ----------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI  223 (329)
T ss_pred             ----------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence                                        0013588999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCccccc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      ...+......+  +..++..+.+||.+||+.||.+|++. .+.+++++.||||++++|..+.
T Consensus       224 ~~~i~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~  283 (329)
T PTZ00263        224 YEKILAGRLKF--PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLY  283 (329)
T ss_pred             HHHHhcCCcCC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHH
Confidence            77776655444  34689999999999999999999973 3458999999999999998763

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=8.4e-31  Score=224.10  Aligned_cols=160  Identities=34%  Similarity=0.749  Sum_probs=130.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++........                                          
T Consensus       114 ~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  151 (321)
T cd05591         114 RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV------------------------------------------  151 (321)
T ss_pred             HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc------------------------------------------
Confidence            36999999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~  204 (321)
T cd05591         152 ---------------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL  204 (321)
T ss_pred             ---------------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH
Confidence                                       00123589999999999988899999999999999999999999999888888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc---ChHHHhcCCCCCCCCccccc--cCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK---GASAIKHHPFFQGVNWALLR--CTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~---~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~  231 (250)
                      +..+.......|  ..++.++.+||.+||+.||++|+++.+   .+.+++.||||..++|..+.  ...+|+.|..
T Consensus       205 ~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~  278 (321)
T cd05591         205 FESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKI  278 (321)
T ss_pred             HHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCC
Confidence            877776554443  358999999999999999999995443   49999999999999998763  3455665554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=1.3e-30  Score=222.68  Aligned_cols=169  Identities=37%  Similarity=0.779  Sum_probs=130.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  151 (316)
T cd05619         114 SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA------------------------------------------  151 (316)
T ss_pred             hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC------------------------------------------
Confidence            36999999999999999999999999998743211000                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||..|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~  204 (316)
T cd05619         152 ---------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL  204 (316)
T ss_pred             ---------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123588999999999988899999999999999999999999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChH-HHhcCCCCCCCCcccccc--CCCCCCCCCCCcCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS-AIKHHPFFQGVNWALLRC--TTPPFVPPPFNRELV  237 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~-~ll~hp~~~~~~~~~~~~--~~~~~~~~~~~~~~~  237 (250)
                      ...+.......  +..++.++.+||.+||+.||++|++    +. +++.||||+.++|..+..  .++|+.|..     .
T Consensus       205 ~~~i~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~-----~  273 (316)
T cd05619         205 FQSIRMDNPCY--PRWLTREAKDILVKLFVREPERRLG----VKGDIRQHPFFREIDWSALEEREIEPPFKPKV-----K  273 (316)
T ss_pred             HHHHHhCCCCC--CccCCHHHHHHHHHHhccCHhhcCC----ChHHHHcCcccCCCCHHHHHhCCCCCCcCCCC-----C
Confidence            66654433333  3458899999999999999999999    75 899999999999987643  455555543     3


Q ss_pred             CCCCCCCCCccC
Q 025601          238 SDESCPETPVEY  249 (250)
Q Consensus       238 ~~~~~~~~~~~~  249 (250)
                      ...+|++...+|
T Consensus       274 ~~~~~~~~~~~~  285 (316)
T cd05619         274 SANDCSNFDKEF  285 (316)
T ss_pred             CccchhhcChhh
Confidence            334455554443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=222.41  Aligned_cols=158  Identities=42%  Similarity=0.805  Sum_probs=127.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       111 ~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  148 (312)
T cd05585         111 KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD------------------------------------------  148 (312)
T ss_pred             hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC------------------------------------------
Confidence            47999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+......
T Consensus       149 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~  201 (312)
T cd05585         149 ---------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM  201 (312)
T ss_pred             ---------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH
Confidence                                       01123689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc--cCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR--CTTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~  230 (250)
                      ...+......+  +..++.++.+||.+||+.||++|+++.. +.+++.||||.+++|..+.  ...+++.|.
T Consensus       202 ~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dp~~R~~~~~-~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~  270 (312)
T cd05585         202 YRKILQEPLRF--PDGFDRDAKDLLIGLLSRDPTRRLGYNG-AQEIKNHPFFSQLSWKKLLMKGIQPPFKPA  270 (312)
T ss_pred             HHHHHcCCCCC--CCcCCHHHHHHHHHHcCCCHHHcCCCCC-HHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence            77776654444  3468999999999999999999987443 8999999999999987653  333444443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.1e-30  Score=224.24  Aligned_cols=160  Identities=43%  Similarity=0.760  Sum_probs=126.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       113 ~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  150 (328)
T cd05593         113 SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA------------------------------------------  150 (328)
T ss_pred             hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc------------------------------------------
Confidence            36999999999999999999999999998754211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       151 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~  203 (328)
T cd05593         151 ---------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  203 (328)
T ss_pred             ---------------------------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH
Confidence                                       00123689999999999988899999999999999999999999998877766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc--cCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR--CTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~  231 (250)
                      ...+......+  +..++.++.+||.+||+.||++|++.. +.+.+++.||||.+++|..+.  ...+|+.|..
T Consensus       204 ~~~~~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T cd05593         204 FELILMEDIKF--PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQV  275 (328)
T ss_pred             HHHhccCCccC--CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcC
Confidence            66665544444  346899999999999999999998422 239999999999999998663  2344444433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=1.1e-30  Score=223.56  Aligned_cols=161  Identities=35%  Similarity=0.744  Sum_probs=131.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       119 ~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  156 (323)
T cd05616         119 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV------------------------------------------  156 (323)
T ss_pred             HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       157 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~  209 (323)
T cd05616         157 ---------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL  209 (323)
T ss_pred             ---------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123689999999999998899999999999999999999999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc--cCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR--CTTPPFVPPPF  232 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~  232 (250)
                      ...+......+|  ..++.++.+|+.+||+.+|++|++.. +..++++.||||+.++|..+.  ...+|+.|...
T Consensus       210 ~~~i~~~~~~~p--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~  282 (323)
T cd05616         210 FQSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKAC  282 (323)
T ss_pred             HHHHHhCCCCCC--CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCC
Confidence            777776655544  46899999999999999999999853 346899999999999998774  45566666543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-30  Score=224.03  Aligned_cols=140  Identities=36%  Similarity=0.646  Sum_probs=122.0

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||+|||++.+ +.+||+|||++......                                           
T Consensus       138 ~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~-------------------------------------------  174 (370)
T KOG0583|consen  138 SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE-------------------------------------------  174 (370)
T ss_pred             hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC-------------------------------------------
Confidence            4799999999999999999 99999999998654300                                           


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-C-CchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-H-GSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                +.....++||+.|+|||++.+.. | +.++||||+|++||.|++|..||...+.
T Consensus       175 --------------------------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~  228 (370)
T KOG0583|consen  175 --------------------------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV  228 (370)
T ss_pred             --------------------------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH
Confidence                                      01112358999999999999987 7 6899999999999999999999999888


Q ss_pred             HHHHHHHHHhccCCCCCCCC-ChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAV-PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~-~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ..+..+|..+...+|.  .+ +.++..|+.+||..||.+|++    +.++++||||+..
T Consensus       229 ~~l~~ki~~~~~~~p~--~~~S~~~~~Li~~mL~~~P~~R~t----~~~i~~h~w~~~~  281 (370)
T KOG0583|consen  229 PNLYRKIRKGEFKIPS--YLLSPEARSLIEKMLVPDPSTRIT----LLEILEHPWFQKE  281 (370)
T ss_pred             HHHHHHHhcCCccCCC--CcCCHHHHHHHHHHcCCCcccCCC----HHHHhhChhhccC
Confidence            8888888877777766  45 999999999999999999999    9999999999973

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.4e-31  Score=227.27  Aligned_cols=162  Identities=41%  Similarity=0.764  Sum_probs=130.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.++|+|||+++.......                                          
T Consensus       114 ~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------  151 (330)
T cd05586         114 KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK------------------------------------------  151 (330)
T ss_pred             HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC------------------------------------------
Confidence            36999999999999999999999999998754221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 .....+||..|+|||++.+. .++.++||||+||++|+|++|..||.+....+
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~  204 (330)
T cd05586         152 ---------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ  204 (330)
T ss_pred             ---------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH
Confidence                                       01123689999999999765 47999999999999999999999999888777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc--CCCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC--TTPPFVPPPF  232 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~~  232 (250)
                      ...++......++. ..++..+.+||.+||..||++|++..+.+.+++.||||...+|..+..  ..+|+.|...
T Consensus       205 ~~~~i~~~~~~~~~-~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~  278 (330)
T cd05586         205 MYRNIAFGKVRFPK-NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVD  278 (330)
T ss_pred             HHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCC
Confidence            77777665555443 257899999999999999999998777799999999999999987643  4556655543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=2.2e-30  Score=206.55  Aligned_cols=141  Identities=34%  Similarity=0.534  Sum_probs=119.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +.|+||||||.|+|++.+|.+||+|||+++..........                                        
T Consensus       120 ~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~----------------------------------------  159 (318)
T KOG0659|consen  120 KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT----------------------------------------  159 (318)
T ss_pred             hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc----------------------------------------
Confidence            6799999999999999999999999999977654432111                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                   ..+-|.+|+|||.++|.+ |+..+||||.||+++||+-|.+.|.|.++.++
T Consensus       160 -----------------------------~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ  210 (318)
T KOG0659|consen  160 -----------------------------HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ  210 (318)
T ss_pred             -----------------------------cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH
Confidence                                         115789999999999976 89999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCC---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          161 LANIVARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p~~---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      +..|....+. |.+                           ...++.+.+|+.+||.+||.+|++    +.++|.|+||+
T Consensus       211 L~~If~~LGT-P~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit----a~qaL~~~yf~  285 (318)
T KOG0659|consen  211 LSKIFRALGT-PTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT----ASQALKHPYFK  285 (318)
T ss_pred             HHHHHHHcCC-CCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc----HHHHhcchhhh
Confidence            9887764433 221                           345677899999999999999999    99999999999


Q ss_pred             CCC
Q 025601          214 GVN  216 (250)
Q Consensus       214 ~~~  216 (250)
                      +.+
T Consensus       286 ~~P  288 (318)
T KOG0659|consen  286 SLP  288 (318)
T ss_pred             cCC
Confidence            855

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.6e-31  Score=231.00  Aligned_cols=209  Identities=29%  Similarity=0.522  Sum_probs=147.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|+|||||||+||||+.+|++||.||||+.-+.+..+.......         .+.-.++......-     .....+..
T Consensus       748 mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~g---------dH~RqDSmep~~e~-----~d~~~~lk  813 (1034)
T KOG0608|consen  748 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEG---------DHHRQDSMEPSPEW-----ADISKCLK  813 (1034)
T ss_pred             ccceecccCccceEEccCCceeeeeccccccceeccccccccCC---------CccccccCCCchhh-----ccccccch
Confidence            59999999999999999999999999999777665443322110         00000111000000     00000000


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                      ..+.+  ..           .........+.+||+.|+|||++...+|+..+|.||.|+|||||+.|+.||......+..
T Consensus       814 vL~~r--a~-----------~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq  880 (1034)
T KOG0608|consen  814 VLERR--AM-----------RQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ  880 (1034)
T ss_pred             HHHHH--HH-----------hhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence            00000  00           000111234668999999999999999999999999999999999999999988877776


Q ss_pred             HHHHH--hccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCcCCCCC
Q 025601          162 ANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSD  239 (250)
Q Consensus       162 ~~i~~--~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (250)
                      .++++  ....++.+.+++.++.++|.++.. +++.|+.. ..++++..||||+++||..+++...||+|...-+..-++
T Consensus       881 ~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGk-ng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSN  958 (1034)
T KOG0608|consen  881 YKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGK-NGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSN  958 (1034)
T ss_pred             eeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhhcc-cchhhhhcCccccccchHhhhhccCCcCccccCCCcccc
Confidence            66654  345678888999999999988654 47889873 447889999999999999999999999998754444443

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=1.8e-30  Score=222.31  Aligned_cols=160  Identities=35%  Similarity=0.756  Sum_probs=128.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       119 ~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  156 (324)
T cd05587         119 SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK------------------------------------------  156 (324)
T ss_pred             HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC------------------------------------------
Confidence            36999999999999999999999999998743211000                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+......
T Consensus       157 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~  209 (324)
T cd05587         157 ---------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL  209 (324)
T ss_pred             ---------------------------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~  231 (250)
                      ...+......++  ..++.++.+|+.+||+.||++|++.. ...++++.||||+.++|..+..  ..+|+.|..
T Consensus       210 ~~~i~~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~  281 (324)
T cd05587         210 FQSIMEHNVSYP--KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKV  281 (324)
T ss_pred             HHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcC
Confidence            777766554443  46899999999999999999999854 3358999999999999987633  445555543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.1e-31  Score=222.19  Aligned_cols=146  Identities=28%  Similarity=0.484  Sum_probs=115.9

Q ss_pred             CccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++. ++.+||+|||+++.......                                         
T Consensus       135 s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~-----------------------------------------  173 (313)
T KOG0198|consen  135 SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT-----------------------------------------  173 (313)
T ss_pred             hCCEeccCcccceEEEeCCCCeEEeccCccccccccccc-----------------------------------------
Confidence            479999999999999999 79999999998866443100                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCC-CCh
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRG-VDH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~-~~~  157 (250)
                                               .......+.||+.|||||++... ....++|||||||++.||+||+.||.. ...
T Consensus       174 -------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~  228 (313)
T KOG0198|consen  174 -------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE  228 (313)
T ss_pred             -------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch
Confidence                                     01112246899999999999953 234599999999999999999999987 444


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+..+.........+..++.++++||.+||.++|+.|||    |++||.|||.++..
T Consensus       229 ~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt----a~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  229 AEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPT----AEELLEHPFLKQNS  283 (313)
T ss_pred             HHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcC----HHHHhhChhhhccc
Confidence            45555555444233455679999999999999999999999    99999999998754

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=3.5e-30  Score=220.54  Aligned_cols=160  Identities=39%  Similarity=0.743  Sum_probs=127.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       113 ~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  150 (323)
T cd05595         113 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------  150 (323)
T ss_pred             HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC------------------------------------------
Confidence            36999999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       151 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~  203 (323)
T cd05595         151 ---------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  203 (323)
T ss_pred             ---------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123589999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~  231 (250)
                      ...+......+|  ..++.++.+||.+||..||++|++.. ..+.+++.|+||.+++|..+..  ..||+.|..
T Consensus       204 ~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  275 (323)
T cd05595         204 FELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQV  275 (323)
T ss_pred             HHHHhcCCCCCC--CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence            777766555544  46899999999999999999998322 2399999999999999987643  334554443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=1.1e-30  Score=223.84  Aligned_cols=159  Identities=42%  Similarity=0.791  Sum_probs=129.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       114 ~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  151 (325)
T cd05604         114 SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD------------------------------------------  151 (325)
T ss_pred             HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC------------------------------------------
Confidence            36999999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~  204 (325)
T cd05604         152 ---------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM  204 (325)
T ss_pred             ---------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH
Confidence                                       01123689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc--CCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC--TTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~  230 (250)
                      ...+.......  ....+..+.++|.+||+.+|++|++..+.+.+++.||||++++|..+..  .++|+.|.
T Consensus       205 ~~~~~~~~~~~--~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~  274 (325)
T cd05604         205 YDNILHKPLVL--RPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPN  274 (325)
T ss_pred             HHHHHcCCccC--CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCc
Confidence            77776654333  3358899999999999999999999888889999999999999977643  34455543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1e-30  Score=214.14  Aligned_cols=162  Identities=41%  Similarity=0.754  Sum_probs=142.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.+||.||||.+|+|++.+|++||.||||++......                                           
T Consensus       286 s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g-------------------------------------------  322 (516)
T KOG0690|consen  286 SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG-------------------------------------------  322 (516)
T ss_pred             hCCeeeeechhhhheeccCCceEeeecccchhccccc-------------------------------------------
Confidence            4689999999999999999999999999997643321                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ..+..|+|||-|+|||++-...|+.++|.|-+|+|.|||++|+.||...++...
T Consensus       323 --------------------------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL  376 (516)
T KOG0690|consen  323 --------------------------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL  376 (516)
T ss_pred             --------------------------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH
Confidence                                      123357999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      ++-|+.....+|.  .++++++.|+..+|.+||++|+... ++|.++..|+||.+++|..+  +++.|||-|+-.+
T Consensus       377 FeLIl~ed~kFPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtS  450 (516)
T KOG0690|consen  377 FELILMEDLKFPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTS  450 (516)
T ss_pred             HHHHHhhhccCCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCccc
Confidence            9999888888776  6999999999999999999999844 67999999999999999876  6677887776644

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.9e-30  Score=217.69  Aligned_cols=158  Identities=35%  Similarity=0.710  Sum_probs=122.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       115 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  152 (280)
T cd05608         115 QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS------------------------------------------  152 (280)
T ss_pred             HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc------------------------------------------
Confidence            36999999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus       153 ---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~  205 (280)
T cd05608         153 ---------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE  205 (280)
T ss_pred             ---------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence                                       00123588999999999998899999999999999999999999986543222


Q ss_pred             ----HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccccc--CCCCCCC
Q 025601          161 ----LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLRC--TTPPFVP  229 (250)
Q Consensus       161 ----~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~~--~~~~~~~  229 (250)
                          ...+...  ....+..++..+.+|+.+||+.||++|+++.+ .+++++.||||++++|..+..  .++|++|
T Consensus       206 ~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~  279 (280)
T cd05608         206 NKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP  279 (280)
T ss_pred             HHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence                2222222  22233468999999999999999999997654 599999999999999998744  4445443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=2.8e-30  Score=220.49  Aligned_cols=157  Identities=39%  Similarity=0.821  Sum_probs=125.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       114 ~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-------------------------------------------  150 (316)
T cd05592         114 KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-------------------------------------------  150 (316)
T ss_pred             HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------
Confidence            3689999999999999999999999999885422110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       151 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~  204 (316)
T cd05592         151 --------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL  204 (316)
T ss_pred             --------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                      001124689999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc--CCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC--TTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~  231 (250)
                      ...+......+  +..++.++.+||.+||+.||++|+++   +.+++.||||+.++|..+.+  ..+|+.|..
T Consensus       205 ~~~i~~~~~~~--~~~~~~~~~~ll~~~l~~~P~~R~~~---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~  272 (316)
T cd05592         205 FDSILNDRPHF--PRWISKEAKDCLSKLFERDPTKRLGV---DGDIRQHPFFRGIDWERLEKREIPPPFKPKV  272 (316)
T ss_pred             HHHHHcCCCCC--CCCCCHHHHHHHHHHccCCHHHcCCC---hHHHHcCcccCCCCHHHHHhCCCCCCcCCCC
Confidence            76665443333  34689999999999999999999982   35889999999999987754  444554443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=2.7e-30  Score=221.29  Aligned_cols=159  Identities=43%  Similarity=0.784  Sum_probs=130.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~------------------------------------------  151 (325)
T cd05602         114 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG------------------------------------------  151 (325)
T ss_pred             HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC------------------------------------------
Confidence            36999999999999999999999999998753221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+....+.
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  204 (325)
T cd05602         152 ---------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM  204 (325)
T ss_pred             ---------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH
Confidence                                       01124689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc--cCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR--CTTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~  230 (250)
                      +..+......  ....++..+.++|.+||+.||.+|++..+.+.++++|+||..++|..+.  +..+|+.|.
T Consensus       205 ~~~i~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (325)
T cd05602         205 YDNILNKPLQ--LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNPN  274 (325)
T ss_pred             HHHHHhCCcC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCC
Confidence            7777655433  3346899999999999999999999988888899999999999998763  344444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=4.3e-30  Score=219.48  Aligned_cols=160  Identities=40%  Similarity=0.800  Sum_probs=127.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       114 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------  150 (318)
T cd05570         114 ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-------------------------------------------  150 (318)
T ss_pred             hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-------------------------------------------
Confidence            3689999999999999999999999999874321110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+||..|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       151 --------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~  204 (318)
T cd05570         151 --------------------------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL  204 (318)
T ss_pred             --------------------------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH
Confidence                                      001123588999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc--cCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR--CTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~  231 (250)
                      ...+.......+  ..++..+.+||.+||+.||++||+.. ..+.+++.||||+.++|..+.  ...+|+.|..
T Consensus       205 ~~~i~~~~~~~~--~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (318)
T cd05570         205 FQSILEDEVRYP--RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKI  276 (318)
T ss_pred             HHHHHcCCCCCC--CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence            776665554443  46899999999999999999999921 112999999999999997653  3445555544

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.8e-30  Score=221.86  Aligned_cols=157  Identities=40%  Similarity=0.663  Sum_probs=130.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.....                                             
T Consensus       119 ~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---------------------------------------------  153 (333)
T cd05600         119 ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---------------------------------------------  153 (333)
T ss_pred             HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---------------------------------------------
Confidence            36999999999999999999999999998744221                                             


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       154 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         154 ---------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             ---------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence                                       00123689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccC--CCCC----CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCC
Q 025601          161 LANIVARALE--FPKE----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~--~p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~  233 (250)
                      ...+......  .+..    ..++.++.+||.+||..+|.+|++    +++++.||||.+++|..+....+|++|..-.
T Consensus       207 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s----~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~  281 (333)
T cd05600         207 WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS----LEDIKNHPFFKEVDWNELRELKPPFVPELES  281 (333)
T ss_pred             HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC----HHHHHhCcccCCCCHHHHhhCCCCCCCCCCC
Confidence            6665543221  1221    146899999999999999999999    9999999999999999998888888887643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=1e-29  Score=221.04  Aligned_cols=185  Identities=31%  Similarity=0.560  Sum_probs=125.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++................         .........               
T Consensus       119 ~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~---------~~~~~~~~~---------------  174 (363)
T cd05628         119 QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNH---------SLPSDFTFQ---------------  174 (363)
T ss_pred             hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccc---------ccccccccc---------------
Confidence            47999999999999999999999999999875432211100000000         000000000               


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                        ....        ......+...........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       175 --~~~~--------~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~  244 (363)
T cd05628         175 --NMNS--------KRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET  244 (363)
T ss_pred             --cccc--------ccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence              0000        000000000001112245799999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCcccc---CCCccChHHHhcCCCCCCCCccccccCC
Q 025601          161 LANIVARA--LEFPKEPAVPATAKDLISQLLAKDPERR---LGSTKGASAIKHHPFFQGVNWALLRCTT  224 (250)
Q Consensus       161 ~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~R---~t~~~~a~~ll~hp~~~~~~~~~~~~~~  224 (250)
                      ..++....  ..+|....++.++.+||.+|+. +|.+|   |+    ++++++||||++++|..+.+..
T Consensus       245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~----~~ei~~hp~f~~~~~~~~~~~~  308 (363)
T cd05628         245 YKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPG----VEEIKTNPFFEGVDWEHIRERP  308 (363)
T ss_pred             HHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCC----HHHHhCCCCCCCCCHHHHHhCC
Confidence            77776532  3345545678999999999875 55555   66    9999999999999999886644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=4.9e-30  Score=219.57  Aligned_cols=150  Identities=41%  Similarity=0.836  Sum_probs=123.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       118 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  155 (323)
T cd05584         118 QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT------------------------------------------  155 (323)
T ss_pred             HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       156 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~  208 (323)
T cd05584         156 ---------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT  208 (323)
T ss_pred             ---------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH
Confidence                                       01123689999999999988899999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      ...+.......  +..++..+.+||.+||+.+|++|++.. ..+++++.||||...+|..+.
T Consensus       209 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~  268 (323)
T cd05584         209 IDKILKGKLNL--PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLL  268 (323)
T ss_pred             HHHHHcCCCCC--CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHh
Confidence            77776655443  446899999999999999999999322 239999999999999997663

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=2.4e-30  Score=221.66  Aligned_cols=159  Identities=41%  Similarity=0.766  Sum_probs=126.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.......                                           
T Consensus       115 ~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------------------------------------  151 (325)
T cd05594         115 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------  151 (325)
T ss_pred             CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-------------------------------------------
Confidence            6899999999999999999999999998743211100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       152 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~  205 (325)
T cd05594         152 --------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF  205 (325)
T ss_pred             --------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHH
Confidence                                      001235899999999999888999999999999999999999999988877666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPPP  231 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~  231 (250)
                      ..+......++  ..++.++.+||.+||+.||++|++.. ..+.+++.||||.++.|..+..  ..+|+.|+.
T Consensus       206 ~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~  276 (325)
T cd05594         206 ELILMEEIRFP--RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQV  276 (325)
T ss_pred             HHHhcCCCCCC--CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcC
Confidence            66655544443  46899999999999999999998322 2399999999999999986633  345555544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5e-30  Score=221.49  Aligned_cols=187  Identities=41%  Similarity=0.763  Sum_probs=136.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.....................                           ...
T Consensus       120 ~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~  172 (350)
T cd05573         120 LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLF---------------------------RDN  172 (350)
T ss_pred             CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccc---------------------------ccc
Confidence            69999999999999999999999999998765433211110000000000                           000


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                      ....             ...............||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       173 ~~~~-------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         173 VLVR-------------RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             cccc-------------ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence            0000             000000001112346899999999999988999999999999999999999999998877777


Q ss_pred             HHHHH--hccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCC
Q 025601          162 ANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPF  232 (250)
Q Consensus       162 ~~i~~--~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~  232 (250)
                      .++..  .....+....++..+.+||.+||. +|.+|++.   +++++.||||++++|.......+|.+|..-
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s---~~~ll~hp~~~~~~~~~~~~~~~~~~~~~~  308 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGS---FEEIKSHPFFKGIDWENLRETKPPFVPELS  308 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCC---HHHHhcCCCcCCCCHHHHhhCCCCcCCCCC
Confidence            77776  444555555679999999999998 99999984   889999999999999988887788877653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=1.1e-29  Score=208.33  Aligned_cols=143  Identities=27%  Similarity=0.377  Sum_probs=119.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +.|+|||||++|+|+...|.+||+|||||+.......                                           
T Consensus       196 ~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k-------------------------------------------  232 (419)
T KOG0663|consen  196 NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK-------------------------------------------  232 (419)
T ss_pred             ceeEecccchhheeeccCCcEEecccchhhhhcCCcc-------------------------------------------
Confidence            5799999999999999999999999999977554321                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                .-...+-|.+|+|||.+.|.. |++++|+||+|||+.||+++++.|.|.+..++
T Consensus       233 --------------------------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ  286 (419)
T KOG0663|consen  233 --------------------------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ  286 (419)
T ss_pred             --------------------------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH
Confidence                                      111347899999999999976 99999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCC------------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFPKE------------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p~~------------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      +.+|....+.....                              ..+++...+|++.+|.+||++|.|    |++.|.|+
T Consensus       287 l~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t----A~~~L~h~  362 (419)
T KOG0663|consen  287 LDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT----AEDGLKHE  362 (419)
T ss_pred             HHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc----HHHhhccc
Confidence            88887643321110                              114477889999999999999999    99999999


Q ss_pred             CCCCCCc
Q 025601          211 FFQGVNW  217 (250)
Q Consensus       211 ~~~~~~~  217 (250)
                      ||...+-
T Consensus       363 ~F~e~P~  369 (419)
T KOG0663|consen  363 YFRETPL  369 (419)
T ss_pred             ccccCCC
Confidence            9999653

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=9e-30  Score=217.99  Aligned_cols=159  Identities=35%  Similarity=0.766  Sum_probs=130.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       119 ~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~------------------------------------------  156 (323)
T cd05615         119 RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV------------------------------------------  156 (323)
T ss_pred             HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+......
T Consensus       157 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~  209 (323)
T cd05615         157 ---------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL  209 (323)
T ss_pred             ---------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       01123589999999999988899999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~  230 (250)
                      ...+.......|  ..++.++.+|+.+||+.+|++|++.. +.+++++.||||+.++|..+..  ..+|+.|.
T Consensus       210 ~~~i~~~~~~~p--~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~  280 (323)
T cd05615         210 FQSIMEHNVSYP--KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPK  280 (323)
T ss_pred             HHHHHhCCCCCC--ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCc
Confidence            777776655444  46899999999999999999999854 3578999999999999987743  45666664

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.96  E-value=6.3e-30  Score=205.00  Aligned_cols=140  Identities=29%  Similarity=0.513  Sum_probs=114.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      |||||||+||+|||++..|.+||||||++-++..+....                                         
T Consensus       211 H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht-----------------------------------------  249 (391)
T KOG0983|consen  211 HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT-----------------------------------------  249 (391)
T ss_pred             cceeecccCccceEEccCCCEEeecccccceeecccccc-----------------------------------------
Confidence            799999999999999999999999999986554432110                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-h
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVD-H  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~-~  157 (250)
                                                +   -.|-+.|||||.+--   ..|+.++||||||+.++||+||+.||.+-+ .
T Consensus       250 --------------------------r---sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td  300 (391)
T KOG0983|consen  250 --------------------------R---SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD  300 (391)
T ss_pred             --------------------------c---ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc
Confidence                                      0   147789999999864   348999999999999999999999999855 3


Q ss_pred             HHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      -+++-++++...+ .+....+++.+++|+..||++|+.+||.    -.+||+|||+...
T Consensus       301 Fe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~----Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  301 FEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK----YNKLLEHPFIKRY  355 (391)
T ss_pred             HHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc----hHHHhcCcceeec
Confidence            4556666664443 2333458999999999999999999999    9999999998854

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=1.6e-29  Score=221.08  Aligned_cols=117  Identities=36%  Similarity=0.693  Sum_probs=95.5

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh--ccCCCCCCCCChHHHHHHHHh
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR--ALEFPKEPAVPATAKDLISQL  188 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~ll~~~  188 (250)
                      +++||+.|+|||++.+..++.++|||||||++|||++|..||......+...+++..  ....+....++.++.+||.+|
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~l  286 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKL  286 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHH
Confidence            457999999999999888999999999999999999999999988777666666542  234444456899999999996


Q ss_pred             c--ccCccccCCCccChHHHhcCCCCCCCCccc-cccCCCCCCCCC
Q 025601          189 L--AKDPERRLGSTKGASAIKHHPFFQGVNWAL-LRCTTPPFVPPP  231 (250)
Q Consensus       189 L--~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~-~~~~~~~~~~~~  231 (250)
                      +  ..++..|++    +++++.||||.+++|.. +....+|++|..
T Consensus       287 l~~~~~~~~R~~----~~~~l~hp~f~~~~~~~~~~~~~~~~~p~~  328 (381)
T cd05626         287 CCSAEERLGRNG----ADDIKAHPFFSEVDFSSDIRTQPAPYVPKI  328 (381)
T ss_pred             ccCcccccCCCC----HHHHhcCcccCCCChhHHhhcCCCCccCcC
Confidence            5  445556999    99999999999999976 455666777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=8.2e-30  Score=217.93  Aligned_cols=159  Identities=43%  Similarity=0.765  Sum_probs=129.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  151 (321)
T cd05603         114 SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE------------------------------------------  151 (321)
T ss_pred             HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC------------------------------------------
Confidence            36899999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  204 (321)
T cd05603         152 ---------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM  204 (321)
T ss_pred             ---------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH
Confidence                                       00123689999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc--cCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR--CTTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~  230 (250)
                      ...+.......  +...+..+.++|.+||+.||.+|++....+.++++|+||..++|..+.  ...+|+.|.
T Consensus       205 ~~~i~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (321)
T cd05603         205 YDNILHKPLQL--PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPN  274 (321)
T ss_pred             HHHHhcCCCCC--CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCC
Confidence            77766554333  346789999999999999999999977778899999999999998764  344555544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=2.5e-30  Score=221.92  Aligned_cols=160  Identities=39%  Similarity=0.733  Sum_probs=129.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.........                                         
T Consensus       120 ~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-----------------------------------------  158 (330)
T cd05601         120 QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-----------------------------------------  158 (330)
T ss_pred             HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-----------------------------------------
Confidence            368999999999999999999999999988543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec------CCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS------GEGHGSPVDWWTLGIFLFELFYGVTPFRG  154 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~vl~elltg~~pf~~  154 (250)
                                                 ......||+.|+|||++.      +..++.++|||||||++|+|++|..||.+
T Consensus       159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  211 (330)
T cd05601         159 ---------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE  211 (330)
T ss_pred             ---------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence                                       000125889999999987      34578999999999999999999999998


Q ss_pred             CChHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCC
Q 025601          155 VDHELTLANIVARA--LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPF  232 (250)
Q Consensus       155 ~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~  232 (250)
                      ......+.+++...  ..++....++..+.+||.+||+ +|++|++    +++++.||||..++|..+....+|.+|...
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t----~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~  286 (330)
T cd05601         212 GTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG----YEGLCCHPFFSKIDWNNIRNSLPPFVPTLK  286 (330)
T ss_pred             CCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC----HHHHhCCCCcCCCCHHHHhhCCCCccCcCC
Confidence            88777777766533  3345555689999999999998 9999999    999999999999999999887777777653


Q ss_pred             C
Q 025601          233 N  233 (250)
Q Consensus       233 ~  233 (250)
                      .
T Consensus       287 ~  287 (330)
T cd05601         287 S  287 (330)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=6.7e-30  Score=223.20  Aligned_cols=116  Identities=42%  Similarity=0.825  Sum_probs=99.1

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHh
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA--LEFPKEPAVPATAKDLISQL  188 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~  188 (250)
                      +.+||+.|+|||++.+..++.++|||||||++|||++|..||.+....+.+..+....  ..+|....++.++.+||.+|
T Consensus       207 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~l  286 (377)
T cd05629         207 STVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRL  286 (377)
T ss_pred             ccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHH
Confidence            3579999999999998889999999999999999999999999887777776666432  33444446889999999999


Q ss_pred             cccCccccC---CCccChHHHhcCCCCCCCCccccccCCCCCCCCC
Q 025601          189 LAKDPERRL---GSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP  231 (250)
Q Consensus       189 L~~dP~~R~---t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~  231 (250)
                      |. +|.+|+   +    +.+++.||||++++|..+....+|++|..
T Consensus       287 L~-~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~~~~~~  327 (377)
T cd05629         287 IT-NAENRLGRGG----AHEIKSHPFFRGVDWDTIRQIRAPFIPQL  327 (377)
T ss_pred             hc-CHhhcCCCCC----HHHHhcCCCcCCCCHHHHccCCCCcccCC
Confidence            98 777765   6    99999999999999999999888888875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=9.2e-30  Score=213.23  Aligned_cols=158  Identities=35%  Similarity=0.667  Sum_probs=122.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       113 ~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------  150 (277)
T cd05607         113 SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT------------------------------------------  150 (277)
T ss_pred             HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce------------------------------------------
Confidence            36999999999999999999999999998744321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                                  .....++..|+|||++.+..++.++||||+||++|+|++|..||.+....  
T Consensus       151 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~  202 (277)
T cd05607         151 ----------------------------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA  202 (277)
T ss_pred             ----------------------------eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh
Confidence                                        00124788999999998888999999999999999999999999765322  


Q ss_pred             --HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc--CCCCCCC
Q 025601          159 --LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC--TTPPFVP  229 (250)
Q Consensus       159 --~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~  229 (250)
                        .....+.......+ ...++.++.+||.+||+.||++||++.+..++++.|+||++++|+++..  .++|++|
T Consensus       203 ~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~  276 (277)
T cd05607         203 KEELKRRTLEDEVKFE-HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP  276 (277)
T ss_pred             HHHHHHHhhccccccc-cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence              22222222222221 2358999999999999999999999777779999999999999998875  3445443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1e-29  Score=220.93  Aligned_cols=200  Identities=33%  Similarity=0.573  Sum_probs=136.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.++|+|||+++.+...............        .....               ....
T Consensus       119 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~--------~~~~~---------------~~~~  175 (364)
T cd05599         119 KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHA--------LPSNF---------------LDFI  175 (364)
T ss_pred             HCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccc--------ccccc---------------cccc
Confidence            368999999999999999999999999998665332111000000000        00000               0000


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                      .......        .....+.........+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       176 ~~~~~~~--------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~  247 (364)
T cd05599         176 SKPMSSK--------RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET  247 (364)
T ss_pred             ccccccc--------ccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH
Confidence            0000000        00000000001111234799999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhcc--CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCC
Q 025601          161 LANIVARAL--EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~--~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~  233 (250)
                      ...++....  .++....++.++.+||.+||. +|.+|++. ..+++++.||||++++|..+....+|.+|..-.
T Consensus       248 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
T cd05599         248 YRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-NGVNEIKSHPFFKGVDWEHIRERPAPIIPELKS  320 (364)
T ss_pred             HHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCCCCCCC
Confidence            776665332  344444678999999999997 89999975 459999999999999999988888888876543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-30  Score=217.38  Aligned_cols=147  Identities=31%  Similarity=0.445  Sum_probs=120.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|-||||||+.||||+.+|.+||+|||.+..+.......                                        
T Consensus       144 ~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~----------------------------------------  183 (516)
T KOG0582|consen  144 QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ----------------------------------------  183 (516)
T ss_pred             hcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee----------------------------------------
Confidence            4799999999999999999999999999875555432110                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                               ..+...++||++|||||+++.  .+|+.++||||||++..||++|..||......
T Consensus       184 -------------------------~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm  238 (516)
T KOG0582|consen  184 -------------------------VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM  238 (516)
T ss_pred             -------------------------eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH
Confidence                                     011135789999999999654  45999999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCCCC--------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .++...+++..+.+..        ..++..++.++..||++||.+|||    |++||.|+||+...
T Consensus       239 kvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt----AskLlkh~FFk~~k  300 (516)
T KOG0582|consen  239 KVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT----ASKLLKHAFFKKAK  300 (516)
T ss_pred             HHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC----HHHHhccHHHhhcc
Confidence            8877766666553332        335567899999999999999999    99999999999764

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.96  E-value=3.7e-30  Score=206.38  Aligned_cols=143  Identities=35%  Similarity=0.592  Sum_probs=123.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++|+||||||+|||++.+..+||+|||.+.+...-...+                                         
T Consensus       142 ~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLr-----------------------------------------  180 (411)
T KOG0599|consen  142 RNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLR-----------------------------------------  180 (411)
T ss_pred             hhhhhcccChhheeeccccceEEeccceeeccCCchhHH-----------------------------------------
Confidence            479999999999999999999999999997765433222                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec------CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS------GEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   ..+|||.|+|||.+.      ..+|+..+|+|++|+++|.|+.|..||--.
T Consensus       181 -----------------------------elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR  231 (411)
T KOG0599|consen  181 -----------------------------ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR  231 (411)
T ss_pred             -----------------------------HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence                                         248999999999885      245899999999999999999999999888


Q ss_pred             ChHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          156 DHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      ....++..|+.+.+.+..+  .+++...++||.+||+.||.+|+|    ++++|+||||.++...
T Consensus       232 kQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit----ake~LaHpff~q~~~~  292 (411)
T KOG0599|consen  232 KQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT----AKEALAHPFFIQIAQQ  292 (411)
T ss_pred             HHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc----HHHHhcChHHHHHHHh
Confidence            8888888899988876655  578999999999999999999999    9999999999765443

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=6.4e-30  Score=217.96  Aligned_cols=145  Identities=38%  Similarity=0.667  Sum_probs=123.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|||||||||+|+|++.+|++||+|||.+...........                                        
T Consensus       229 QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~----------------------------------------  268 (576)
T KOG0585|consen  229 QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGS----------------------------------------  268 (576)
T ss_pred             cCeeccccchhheEEcCCCcEEeeccceeeecccCCcccc----------------------------------------
Confidence            6999999999999999999999999998865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                              +..-...+|||.|+|||.+.+..    .+.+.||||+|++||-|+.|+.||.+...
T Consensus       269 ------------------------d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~  324 (576)
T KOG0585|consen  269 ------------------------DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE  324 (576)
T ss_pred             ------------------------HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence                                    00001137999999999998733    38899999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .++..+|++....+|....+...+++||.+||.+||+.|.+    +.++..|||...
T Consensus       325 ~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~----l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  325 LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT----LPDIKLHPWVTR  377 (576)
T ss_pred             HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee----hhhheecceecc
Confidence            99999999999999998889999999999999999999999    999999999764

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=2.6e-29  Score=219.84  Aligned_cols=121  Identities=36%  Similarity=0.721  Sum_probs=99.9

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHh
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA--LEFPKEPAVPATAKDLISQL  188 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~  188 (250)
                      +.+||+.|+|||++.+..++.++||||+||++|||++|..||.+....+...+++...  ...|....+++++.+||.+|
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l  286 (382)
T cd05625         207 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKL  286 (382)
T ss_pred             ccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHH
Confidence            4579999999999999889999999999999999999999999888777776666533  33444456899999999998


Q ss_pred             cccCccccCCCccChHHHhcCCCCCCCCccc-cccCCCCCCCCCCC
Q 025601          189 LAKDPERRLGSTKGASAIKHHPFFQGVNWAL-LRCTTPPFVPPPFN  233 (250)
Q Consensus       189 L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~-~~~~~~~~~~~~~~  233 (250)
                      +. +|.+|++. ..+++++.||||++++|.. +....+|++|....
T Consensus       287 ~~-~p~~R~~~-~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~  330 (382)
T cd05625         287 CR-GPEDRLGK-NGADEIKAHPFFKTIDFSSDLRQQSAPYIPKITH  330 (382)
T ss_pred             cc-CHhHcCCC-CCHHHHhcCCCcCCcChHHHHhcCCCCccCcCCC
Confidence            74 99999973 3489999999999999975 56677777776533

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=1.1e-29  Score=220.60  Aligned_cols=188  Identities=33%  Similarity=0.599  Sum_probs=127.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.++|+|||++.................         ......+..               
T Consensus       119 ~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~---------------  174 (360)
T cd05627         119 QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTH---------NPPSDFSFQ---------------  174 (360)
T ss_pred             HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccccccccc---------CCccccccc---------------
Confidence            47999999999999999999999999999865432211100000000         000000000               


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                        ......        ..............+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       175 --~~~~~~--------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~  244 (360)
T cd05627         175 --NMNSKR--------KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQET  244 (360)
T ss_pred             --cccccc--------ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHH
Confidence              000000        0000000001112245799999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCC
Q 025601          161 LANIVARA--LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT  224 (250)
Q Consensus       161 ~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~  224 (250)
                      ..++....  ..+|....++.++.+||.+|+. +|.+|++.. .+++++.||||++++|..+....
T Consensus       245 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~-~~~ei~~hp~f~~~~~~~~~~~~  308 (360)
T cd05627         245 YRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSN-GVEEIKSHPFFEGVDWGHIRERP  308 (360)
T ss_pred             HHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCC-CHHHHhcCCCCCCCCHHHHhcCC
Confidence            77766532  3344444578999999999885 999999732 38999999999999999886543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.96  E-value=1.1e-29  Score=224.03  Aligned_cols=140  Identities=32%  Similarity=0.511  Sum_probs=114.8

Q ss_pred             CccceeecCCCCcEEeCCC--CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD--GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~--~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      ++||||+||||+||||..-  ..+||+|||.+.......                                         
T Consensus       307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v-----------------------------------------  345 (586)
T KOG0667|consen  307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV-----------------------------------------  345 (586)
T ss_pred             hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc-----------------------------------------
Confidence            4799999999999999753  479999999874432211                                         


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                     ...+.+..|+|||+|.|.+|+.+.||||||||++||++|.+.|.|.+..
T Consensus       346 -------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~  394 (586)
T KOG0667|consen  346 -------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY  394 (586)
T ss_pred             -------------------------------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH
Confidence                                           1246889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCC-------------------------------------------------C------------CC
Q 025601          159 LTLANIVARALEFPKE-------------------------------------------------P------------AV  177 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~-------------------------------------------------~------------~~  177 (250)
                      ++++.|++..+..|..                                                 +            ..
T Consensus       395 DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~  474 (586)
T KOG0667|consen  395 DQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKAD  474 (586)
T ss_pred             HHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhccccc
Confidence            9999988754432221                                                 0            01


Q ss_pred             ChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       178 ~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      -..+.+||.+||.+||+.|+|    +.++|+||||.+..
T Consensus       475 ~~~F~dflk~~L~~dP~~R~t----p~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  475 DKLFIDFLKRCLEWDPAERIT----PAQALNHPFLTGTS  509 (586)
T ss_pred             HHHHHHHHHHHhccCchhcCC----HHHHhcCccccccc
Confidence            134689999999999999999    99999999999653

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.6e-29  Score=220.31  Aligned_cols=163  Identities=37%  Similarity=0.741  Sum_probs=128.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       160 ~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~------------------------------------------  197 (370)
T cd05621         160 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM------------------------------------------  197 (370)
T ss_pred             HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc------------------------------------------
Confidence            36999999999999999999999999999855321110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......+||+.|+|||++.+..    ++.++||||+||++|+|++|..||.+.+
T Consensus       198 --------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~  251 (370)
T cd05621         198 --------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS  251 (370)
T ss_pred             --------------------------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence                                      0011236899999999997643    7889999999999999999999999988


Q ss_pred             hHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCc--cccccCCCCCCCC
Q 025601          157 HELTLANIVARA--LEFPKEPAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNW--ALLRCTTPPFVPP  230 (250)
Q Consensus       157 ~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~--~~~~~~~~~~~~~  230 (250)
                      ......+++...  ..++....++..+.+++.+||..++.+  |++    +.+++.||||+...|  ..+....+|++|.
T Consensus       252 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~----~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~  327 (370)
T cd05621         252 LVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNG----VEEIKQHPFFKNDQWNWDNIRETAAPVVPE  327 (370)
T ss_pred             HHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCC----HHHHhcCcccCCCCcChHhcCCCCCCcCCC
Confidence            877777777644  344554567999999999999865543  778    999999999998655  5666777888888


Q ss_pred             CCCcC
Q 025601          231 PFNRE  235 (250)
Q Consensus       231 ~~~~~  235 (250)
                      ..+..
T Consensus       328 ~~~~~  332 (370)
T cd05621         328 LSSDI  332 (370)
T ss_pred             CCCcc
Confidence            75544

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.8e-29  Score=216.53  Aligned_cols=144  Identities=31%  Similarity=0.466  Sum_probs=120.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|||||.+||||+.+|.+||+|||||+.........                                        
T Consensus       236 ~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~----------------------------------------  275 (560)
T KOG0600|consen  236 SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAP----------------------------------------  275 (560)
T ss_pred             hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcc----------------------------------------
Confidence            4799999999999999999999999999997654432211                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  -.+.+-|++|+|||.+.|.. |+.++|+||.|||+.||++|++.|.|.+..+
T Consensus       276 ----------------------------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve  327 (560)
T KOG0600|consen  276 ----------------------------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE  327 (560)
T ss_pred             ----------------------------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH
Confidence                                        11347899999999999976 9999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCC---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ++..|.+..+.....                           ..++....+|+..||..||.+|.|    |.++|+++||
T Consensus       328 Ql~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t----A~~aL~seyF  403 (560)
T KOG0600|consen  328 QLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT----ASSALQSEYF  403 (560)
T ss_pred             HHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc----HHHHhcCccc
Confidence            998887644321111                           446688899999999999999999    9999999999


Q ss_pred             CCCC
Q 025601          213 QGVN  216 (250)
Q Consensus       213 ~~~~  216 (250)
                      ....
T Consensus       404 ~t~p  407 (560)
T KOG0600|consen  404 TTEP  407 (560)
T ss_pred             ccCC
Confidence            6544

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=2.1e-29  Score=208.73  Aligned_cols=143  Identities=31%  Similarity=0.469  Sum_probs=116.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||.||+++.+|.+||+|||+|+...-....                                         
T Consensus       138 ~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~-----------------------------------------  176 (323)
T KOG0594|consen  138 SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT-----------------------------------------  176 (323)
T ss_pred             hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc-----------------------------------------
Confidence            479999999999999999999999999998632211100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  -..-++|..|+|||++.|. .|++.+||||+||+++||++++..|.|.+..+
T Consensus       177 ----------------------------yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~  228 (323)
T KOG0594|consen  177 ----------------------------YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID  228 (323)
T ss_pred             ----------------------------ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH
Confidence                                        0013688999999999997 48999999999999999999999999999988


Q ss_pred             HHHHHHHhccCCCCC----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEFPKE----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ++..|-...+.....                            ........+++.+||+.+|++|.+    |+.+|.|||
T Consensus       229 ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S----a~~al~h~y  304 (323)
T KOG0594|consen  229 QLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS----AKGALTHPY  304 (323)
T ss_pred             HHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC----HHHHhcChh
Confidence            888887644331111                            112247899999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |....
T Consensus       305 f~~~~  309 (323)
T KOG0594|consen  305 FSELP  309 (323)
T ss_pred             hcccc
Confidence            99874

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=1.6e-29  Score=217.04  Aligned_cols=161  Identities=48%  Similarity=0.876  Sum_probs=121.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       123 ~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~------------------------------------------  160 (332)
T cd05614         123 KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK------------------------------------------  160 (332)
T ss_pred             HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC------------------------------------------
Confidence            36999999999999999999999999998754321110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCC---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVD---  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~---  156 (250)
                                                .....+.||+.|+|||++.+.. ++.++|||||||++|+|++|..||....   
T Consensus       161 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  214 (332)
T cd05614         161 --------------------------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN  214 (332)
T ss_pred             --------------------------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC
Confidence                                      0011246899999999998754 7889999999999999999999996432   


Q ss_pred             -hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc--cCCCCCCCCC
Q 025601          157 -HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR--CTTPPFVPPP  231 (250)
Q Consensus       157 -~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~  231 (250)
                       .......+....  .+.+..++..+.+||.+||+.||++|++.. +.++++++||||++.+|..+.  ...+|+.|..
T Consensus       215 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~  291 (332)
T cd05614         215 TQSEVSRRILKCD--PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSI  291 (332)
T ss_pred             CHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence             222233333322  233446899999999999999999999532 238999999999999997654  3455555543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=2.1e-29  Score=216.25  Aligned_cols=159  Identities=40%  Similarity=0.792  Sum_probs=120.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  151 (329)
T cd05618         114 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD------------------------------------------  151 (329)
T ss_pred             HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC------------------------------------------
Confidence            36999999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~-----  155 (250)
                                                 ....+.||+.|+|||++.+..++.++|||||||++|+|++|..||...     
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~  204 (329)
T cd05618         152 ---------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN  204 (329)
T ss_pred             ---------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC
Confidence                                       011236899999999999988999999999999999999999999521     


Q ss_pred             ---ChHH-HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCccccc--cCCCCC
Q 025601          156 ---DHEL-TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALLR--CTTPPF  227 (250)
Q Consensus       156 ---~~~~-~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~~--~~~~~~  227 (250)
                         .... ....+......+  +..++..+.+||.+||+.||++|++..  ..+.++++||||++++|..+.  ...+|+
T Consensus       205 ~~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~  282 (329)
T cd05618         205 PDQNTEDYLFQVILEKQIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPF  282 (329)
T ss_pred             cccccHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCc
Confidence               1112 233333333333  346899999999999999999999843  235899999999999998663  344555


Q ss_pred             CCC
Q 025601          228 VPP  230 (250)
Q Consensus       228 ~~~  230 (250)
                      .|.
T Consensus       283 ~~~  285 (329)
T cd05618         283 KPN  285 (329)
T ss_pred             cCC
Confidence            554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=2.9e-29  Score=215.18  Aligned_cols=160  Identities=41%  Similarity=0.763  Sum_probs=122.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  151 (327)
T cd05617         114 ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD------------------------------------------  151 (327)
T ss_pred             HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----  156 (250)
                                                 .....+||+.|+|||++.+..++.++|||||||++|+|++|..||....    
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~  204 (327)
T cd05617         152 ---------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD  204 (327)
T ss_pred             ---------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc
Confidence                                       0112468999999999999889999999999999999999999996422    


Q ss_pred             --hHHHHHH-HHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCccccc--cCCCCCCC
Q 025601          157 --HELTLAN-IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALLR--CTTPPFVP  229 (250)
Q Consensus       157 --~~~~~~~-i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~  229 (250)
                        ....+.+ +....  ...+..++..+.++|.+||..||++|++..  ..+++++.||||++++|..+.  ...+|+.|
T Consensus       205 ~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~  282 (327)
T cd05617         205 MNTEDYLFQVILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKP  282 (327)
T ss_pred             cccHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccC
Confidence              2223333 33332  234456899999999999999999999843  346899999999999999874  34555555


Q ss_pred             CC
Q 025601          230 PP  231 (250)
Q Consensus       230 ~~  231 (250)
                      ..
T Consensus       283 ~~  284 (327)
T cd05617         283 QI  284 (327)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=3.7e-29  Score=224.37  Aligned_cols=101  Identities=29%  Similarity=0.440  Sum_probs=81.6

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-----------------
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-----------------  174 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-----------------  174 (250)
                      ++||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+....+.+|..                 
T Consensus       305 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  384 (467)
T PTZ00284        305 IVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSA  384 (467)
T ss_pred             ccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhc
Confidence            468999999999999999999999999999999999999999887766655554433222110                 


Q ss_pred             -----------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          175 -----------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       175 -----------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                                             ......+.+||.+||++||++|+|    ++++|.||||....
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t----a~e~L~Hp~~~~~~  445 (467)
T PTZ00284        385 GQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLN----ARQMTTHPYVLKYY  445 (467)
T ss_pred             ccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCC----HHHHhcCccccccC
Confidence                                   001345679999999999999999    99999999998743

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=3.9e-29  Score=222.45  Aligned_cols=144  Identities=30%  Similarity=0.485  Sum_probs=114.6

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.++ .+||+|||+++......                                          
T Consensus       188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------  225 (440)
T PTZ00036        188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------  225 (440)
T ss_pred             HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC------------------------------------------
Confidence            36999999999999998664 69999999985432110                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+....
T Consensus       226 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~  277 (440)
T PTZ00036        226 ----------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV  277 (440)
T ss_pred             ----------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                                        00123678999999998775 5899999999999999999999999998877


Q ss_pred             HHHHHHHHhccC-----------------CCC----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALE-----------------FPK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~-----------------~p~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +.+.+++...+.                 ++.          +...+.++.+||.+||++||.+|+|    +.++|.|||
T Consensus       278 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t----a~e~l~hp~  353 (440)
T PTZ00036        278 DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN----PIEALADPF  353 (440)
T ss_pred             HHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhCChh
Confidence            777666543221                 111          1246788999999999999999999    999999999


Q ss_pred             CCCCCcc
Q 025601          212 FQGVNWA  218 (250)
Q Consensus       212 ~~~~~~~  218 (250)
                      |..+...
T Consensus       354 f~~~~~~  360 (440)
T PTZ00036        354 FDDLRDP  360 (440)
T ss_pred             HHhhhcc
Confidence            9987654

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=217.73  Aligned_cols=140  Identities=28%  Similarity=0.443  Sum_probs=119.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++.||||||+.||++..+|.+||+|||++-++....                                            
T Consensus       130 ~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~--------------------------------------------  165 (467)
T KOG0201|consen  130 EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV--------------------------------------------  165 (467)
T ss_pred             cceecccccccceeEeccCcEEEEecceeeeeechh--------------------------------------------
Confidence            578999999999999999999999999985443321                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .+...|+||+.|||||++.+..|+.++||||||++.+||++|.+|+........+
T Consensus       166 -------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl  220 (467)
T KOG0201|consen  166 -------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL  220 (467)
T ss_pred             -------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE
Confidence                                     1223579999999999999889999999999999999999999999988776666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ..|-+...+ .....++..+++||..||.+||+.||+    |.+||.|.|++..
T Consensus       221 flIpk~~PP-~L~~~~S~~~kEFV~~CL~k~P~~Rps----A~~LLKh~FIk~a  269 (467)
T KOG0201|consen  221 FLIPKSAPP-RLDGDFSPPFKEFVEACLDKNPEFRPS----AKELLKHKFIKRA  269 (467)
T ss_pred             EeccCCCCC-ccccccCHHHHHHHHHHhhcCcccCcC----HHHHhhhHHHHhc
Confidence            555554433 333478999999999999999999999    9999999999974

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=3.6e-29  Score=214.81  Aligned_cols=160  Identities=39%  Similarity=0.772  Sum_probs=122.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       114 ~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  151 (329)
T cd05588         114 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD------------------------------------------  151 (329)
T ss_pred             HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC------------------------------------------
Confidence            36999999999999999999999999998753211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----  156 (250)
                                                 ......||+.|+|||++.+..++.++|+|||||++|+|++|..||....    
T Consensus       152 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~  204 (329)
T cd05588         152 ---------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN  204 (329)
T ss_pred             ---------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc
Confidence                                       0112368999999999999889999999999999999999999996321    


Q ss_pred             ----hHH-HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCcccccc--CCCCC
Q 025601          157 ----HEL-TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALLRC--TTPPF  227 (250)
Q Consensus       157 ----~~~-~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~~~--~~~~~  227 (250)
                          ... ....+.......  +..++..+.+||.+||+.||++|++..  ..+++++.||||..++|..+..  ..+|+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~  282 (329)
T cd05588         205 PDQNTEDYLFQVILEKQIRI--PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPY  282 (329)
T ss_pred             ccccchHHHHHHHHcCCCCC--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCc
Confidence                112 233333333333  446899999999999999999999844  2478999999999999987643  44455


Q ss_pred             CCCC
Q 025601          228 VPPP  231 (250)
Q Consensus       228 ~~~~  231 (250)
                      .|..
T Consensus       283 ~~~~  286 (329)
T cd05588         283 KPNI  286 (329)
T ss_pred             cccC
Confidence            5443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.8e-29  Score=218.84  Aligned_cols=159  Identities=38%  Similarity=0.732  Sum_probs=128.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||++........                                          
T Consensus       160 ~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  197 (370)
T cd05596         160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM------------------------------------------  197 (370)
T ss_pred             HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------
Confidence            36999999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE----GHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......+||+.|+|||++.+.    .++.++|||||||++|+|++|..||.+..
T Consensus       198 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  251 (370)
T cd05596         198 --------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (370)
T ss_pred             --------------------------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence                                      000123689999999998753    37889999999999999999999999988


Q ss_pred             hHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCcc--ccccCCCCCCCC
Q 025601          157 HELTLANIVARA--LEFPKEPAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNWA--LLRCTTPPFVPP  230 (250)
Q Consensus       157 ~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~~--~~~~~~~~~~~~  230 (250)
                      ......+++...  ..++....++.++.+||.+||+.+|++  |++    +++++.||||++.+|.  .+....+|++|.
T Consensus       252 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s----~~ell~h~~~~~~~~~~~~~~~~~~~~~p~  327 (370)
T cd05596         252 LVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNG----VDEIKSHPFFKNDQWTFDNIRETVAPVVPE  327 (370)
T ss_pred             HHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCC----HHHHhcCcccCCCChhhHHhcCCCcCccCc
Confidence            877777776643  334554568999999999999999987  999    9999999999998886  456666778776


Q ss_pred             C
Q 025601          231 P  231 (250)
Q Consensus       231 ~  231 (250)
                      .
T Consensus       328 ~  328 (370)
T cd05596         328 L  328 (370)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=3.2e-29  Score=215.33  Aligned_cols=162  Identities=36%  Similarity=0.705  Sum_probs=126.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.........                                         
T Consensus       120 ~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~-----------------------------------------  158 (332)
T cd05623         120 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----------------------------------------  158 (332)
T ss_pred             HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc-----------------------------------------
Confidence            379999999999999999999999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......||+.|+|||++.+     ..++.++|||||||++|+|++|..||.+.
T Consensus       159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~  211 (332)
T cd05623         159 ---------------------------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (332)
T ss_pred             ---------------------------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence                                       0011368999999999863     34789999999999999999999999998


Q ss_pred             ChHHHHHHHHHhccCC--CC-CCCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCccccccCCCCCCCC
Q 025601          156 DHELTLANIVARALEF--PK-EPAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP  230 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~--p~-~~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~  230 (250)
                      +..+...++.......  +. ...++.++.+||.+||..++++  |++    +++++.||||.+++|..+.....|++|.
T Consensus       212 ~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~----~~~~~~h~~f~~~~~~~~~~~~~~~~~~  287 (332)
T cd05623         212 SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNG----IEDFKQHPFFTGIDWDNIRNCEAPYIPE  287 (332)
T ss_pred             CHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCC----HHHHhCCCCcCCCCHHHHhhCCCCccCC
Confidence            8777777776544322  22 2357999999999999765444  567    9999999999999999998877888877


Q ss_pred             CCCc
Q 025601          231 PFNR  234 (250)
Q Consensus       231 ~~~~  234 (250)
                      .-..
T Consensus       288 ~~~~  291 (332)
T cd05623         288 VSSP  291 (332)
T ss_pred             CCCC
Confidence            5443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5e-29  Score=209.61  Aligned_cols=160  Identities=37%  Similarity=0.665  Sum_probs=123.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++........                                          
T Consensus       120 ~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------  157 (285)
T cd05605         120 RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET------------------------------------------  157 (285)
T ss_pred             HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....|+..|+|||++.+..++.++||||+||++|++++|..||.+......
T Consensus       158 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~  209 (285)
T cd05605         158 ----------------------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK  209 (285)
T ss_pred             ----------------------------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH
Confidence                                        0023578999999999988899999999999999999999999988765443


Q ss_pred             HHHHHHh--ccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCC
Q 025601          161 LANIVAR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPP  230 (250)
Q Consensus       161 ~~~i~~~--~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~  230 (250)
                      ...+...  ......+..++..+.+||.+||+.||++|+++. +.+++++.||||...+|..+.+  .+||+.|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05605         210 REEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCPD  284 (285)
T ss_pred             HHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence            3332221  112223345899999999999999999999432 1299999999999999998855  44566653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.96  E-value=1.1e-28  Score=214.49  Aligned_cols=140  Identities=30%  Similarity=0.489  Sum_probs=111.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       144 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-------------------------------------------  180 (364)
T cd07875         144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------  180 (364)
T ss_pred             hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC-------------------------------------------
Confidence            3699999999999999999999999999985432110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       181 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  233 (364)
T cd07875         181 ---------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ  233 (364)
T ss_pred             ---------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123578999999999998899999999999999999999999998887666


Q ss_pred             HHHHHHhccCCC------------------------------------C----CCCCChHHHHHHHHhcccCccccCCCc
Q 025601          161 LANIVARALEFP------------------------------------K----EPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       161 ~~~i~~~~~~~p------------------------------------~----~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      +.+++.......                                    .    ....+..+.+||.+||+.||.+|||  
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t--  311 (364)
T cd07875         234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS--  311 (364)
T ss_pred             HHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCC--
Confidence            665544221100                                    0    0112457899999999999999999  


Q ss_pred             cChHHHhcCCCCCC
Q 025601          201 KGASAIKHHPFFQG  214 (250)
Q Consensus       201 ~~a~~ll~hp~~~~  214 (250)
                        +.++|+||||..
T Consensus       312 --~~e~L~hp~~~~  323 (364)
T cd07875         312 --VDEALQHPYINV  323 (364)
T ss_pred             --HHHHhcCccccc
Confidence              999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=4.1e-29  Score=218.07  Aligned_cols=121  Identities=36%  Similarity=0.717  Sum_probs=97.4

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHh
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA--LEFPKEPAVPATAKDLISQL  188 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~  188 (250)
                      .++||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+....  ...+....++.++.+||.+|
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l  282 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRL  282 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHH
Confidence            4579999999999999889999999999999999999999999888766666555432  23444456899999999998


Q ss_pred             cccCccccCCCccChHHHhcCCCCCCCCcccc-ccCCCCCCCCCCC
Q 025601          189 LAKDPERRLGSTKGASAIKHHPFFQGVNWALL-RCTTPPFVPPPFN  233 (250)
Q Consensus       189 L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~-~~~~~~~~~~~~~  233 (250)
                      + .+|.+|++.. .+.+++.||||++++|..+ ....+|++|....
T Consensus       283 ~-~~p~~R~~~~-t~~ell~h~~~~~~~~~~~~~~~~~~~~~~~~~  326 (376)
T cd05598         283 C-CGAEDRLGKN-GADEIKAHPFFKGIDFASLIRRQKAPYIPKITH  326 (376)
T ss_pred             h-cCHhhcCCCC-CHHHHhCCCCcCCCCHHHHhhcCCCCCCCcCCC
Confidence            7 5999999211 2999999999999999877 5566677776533

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.96  E-value=6.6e-29  Score=208.95  Aligned_cols=138  Identities=33%  Similarity=0.474  Sum_probs=112.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++......                                           
T Consensus       128 ~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------  164 (290)
T cd07862         128 SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-------------------------------------------  164 (290)
T ss_pred             HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCc-------------------------------------------
Confidence            3699999999999999999999999999875432110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       165 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~  217 (290)
T cd07862         165 ---------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  217 (290)
T ss_pred             ---------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence                                       00123588999999999888899999999999999999999999999888777


Q ss_pred             HHHHHHhccCCC-----C--------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFP-----K--------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p-----~--------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..++.......     .                    ...++..+.+|+.+||+.||++||+    +.++|.||||
T Consensus       218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~hp~f  290 (290)
T cd07862         218 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYF  290 (290)
T ss_pred             HHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC----HHHHhcCCCC
Confidence            777765332100     0                    0246778899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=1e-28  Score=209.36  Aligned_cols=144  Identities=28%  Similarity=0.384  Sum_probs=108.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++........                                          
T Consensus       121 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  158 (303)
T cd07869         121 QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH------------------------------------------  158 (303)
T ss_pred             HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc------------------------------------------
Confidence            36999999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChH-
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-  158 (250)
                                                 ......+|+.|+|||++.+. .++.++||||+||++|+|++|..||.+.... 
T Consensus       159 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  211 (303)
T cd07869         159 ---------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ  211 (303)
T ss_pred             ---------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                                       00012578999999998764 4789999999999999999999999876543 


Q ss_pred             HHHHHHHHhccCCC---------------------C---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          159 LTLANIVARALEFP---------------------K---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       159 ~~~~~i~~~~~~~p---------------------~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ..+..+........                     .         ...++..+.+||.+||+.||++|+|    ++++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s----~~~~l~  287 (303)
T cd07869         212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS----AQAALS  287 (303)
T ss_pred             HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC----HHHHhc
Confidence            33333322111000                     0         0124567899999999999999999    999999


Q ss_pred             CCCCCCCCc
Q 025601          209 HPFFQGVNW  217 (250)
Q Consensus       209 hp~~~~~~~  217 (250)
                      ||||+++++
T Consensus       288 h~~f~~~~~  296 (303)
T cd07869         288 HEYFSDLPP  296 (303)
T ss_pred             CcccccCCh
Confidence            999999874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1e-28  Score=212.17  Aligned_cols=148  Identities=28%  Similarity=0.439  Sum_probs=111.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.........                                        
T Consensus       121 ~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------  160 (338)
T cd07859         121 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA----------------------------------------  160 (338)
T ss_pred             HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc----------------------------------------
Confidence            3699999999999999999999999999985432111000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                .......+|+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..
T Consensus       161 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~  214 (338)
T cd07859         161 --------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV  214 (338)
T ss_pred             --------------------------ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH
Confidence                                      00012368999999999876  56899999999999999999999999876654


Q ss_pred             HHHHHHHHhccC--------------------------CC---CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          159 LTLANIVARALE--------------------------FP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       159 ~~~~~i~~~~~~--------------------------~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ..+..+....+.                          .+   ....++..+.+||.+||+.||++||+    +++++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~e~l~h  290 (338)
T cd07859         215 HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT----AEEALAD  290 (338)
T ss_pred             HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC----HHHHhcC
Confidence            433222211100                          00   01246788999999999999999999    9999999


Q ss_pred             CCCCCCCcc
Q 025601          210 PFFQGVNWA  218 (250)
Q Consensus       210 p~~~~~~~~  218 (250)
                      |||+++...
T Consensus       291 p~f~~~~~~  299 (338)
T cd07859         291 PYFKGLAKV  299 (338)
T ss_pred             chhhhcCcc
Confidence            999987753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=1.3e-28  Score=206.99  Aligned_cols=161  Identities=38%  Similarity=0.687  Sum_probs=127.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       120 ~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  157 (285)
T cd05632         120 RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES------------------------------------------  157 (285)
T ss_pred             hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc------------------------------------------
Confidence            36899999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....|+..|+|||++.+..++.++|+||+||++|+|++|..||.+......
T Consensus       158 ----------------------------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~  209 (285)
T cd05632         158 ----------------------------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK  209 (285)
T ss_pred             ----------------------------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                        0012578999999999988899999999999999999999999988765544


Q ss_pred             HHHHHHhcc--CCCCCCCCChHHHHHHHHhcccCccccCCCccC-hHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          161 LANIVARAL--EFPKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~--~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~-a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      ...+.....  .......++..+.+|+.+||+.||++|+++.+. ++++++|+||++++|..+  ...+||++|.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (285)
T cd05632         210 REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPDP  285 (285)
T ss_pred             HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCCC
Confidence            433332221  122234678899999999999999999997654 899999999999999875  45778888865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.96  E-value=2.4e-29  Score=218.42  Aligned_cols=139  Identities=32%  Similarity=0.571  Sum_probs=122.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.+|+|||+||.||+++.+|++|+||||+++.|.....                                          
T Consensus       118 s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~------------------------------------------  155 (808)
T KOG0597|consen  118 SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS------------------------------------------  155 (808)
T ss_pred             hcCcccccCCcceeeecCCCceeechhhhhhhcccCce------------------------------------------
Confidence            36899999999999999999999999999977664211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ...++.|||.|||||++.++.|+..+|+||+||++||+++|++||...+....
T Consensus       156 ---------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L  208 (808)
T KOG0597|consen  156 ---------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL  208 (808)
T ss_pred             ---------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence                                       11246799999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +..|+......|.  ..+..+.+|++.+|.+||..|.+    ..+|+.|||.++
T Consensus       209 v~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~Rlt----W~~Ll~HpF~k~  256 (808)
T KOG0597|consen  209 VKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLT----WTDLLGHPFWKG  256 (808)
T ss_pred             HHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhccc----HHHHhcChHHhh
Confidence            8888776655544  78999999999999999999999    999999999986

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=1.1e-28  Score=215.25  Aligned_cols=160  Identities=37%  Similarity=0.717  Sum_probs=126.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++........                                         
T Consensus       160 ~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~-----------------------------------------  198 (371)
T cd05622         160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-----------------------------------------  198 (371)
T ss_pred             HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc-----------------------------------------
Confidence            369999999999999999999999999998543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                 .....+||+.|+|||++.+..    ++.++|||||||++|+|++|..||.+.+
T Consensus       199 ---------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  251 (371)
T cd05622         199 ---------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (371)
T ss_pred             ---------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence                                       001236899999999987643    7889999999999999999999999988


Q ss_pred             hHHHHHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccc---cCCCccChHHHhcCCCCCCCCc--cccccCCCCCCC
Q 025601          157 HELTLANIVARA--LEFPKEPAVPATAKDLISQLLAKDPER---RLGSTKGASAIKHHPFFQGVNW--ALLRCTTPPFVP  229 (250)
Q Consensus       157 ~~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~---R~t~~~~a~~ll~hp~~~~~~~--~~~~~~~~~~~~  229 (250)
                      ......+++...  ..++....++..+.+||.+||. +|..   |++    +++++.|+||++.+|  ..+....+|.+|
T Consensus       252 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~----~~ei~~h~~~~~~~~~~~~~~~~~~~~~~  326 (371)
T cd05622         252 LVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPVVP  326 (371)
T ss_pred             HHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCC----HHHHhcCcccCCCChhHHhcCCCCCCCCC
Confidence            777777776543  3455555789999999999998 4554   556    999999999998654  566777788888


Q ss_pred             CCCC
Q 025601          230 PPFN  233 (250)
Q Consensus       230 ~~~~  233 (250)
                      ....
T Consensus       327 ~~~~  330 (371)
T cd05622         327 DLSS  330 (371)
T ss_pred             CCCC
Confidence            7543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=2.1e-28  Score=212.31  Aligned_cols=140  Identities=31%  Similarity=0.567  Sum_probs=109.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       141 ~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------  177 (359)
T cd07876         141 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-------------------------------------------  177 (359)
T ss_pred             hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc-------------------------------------------
Confidence            3699999999999999999999999999874321100                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       178 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~  230 (359)
T cd07876         178 ---------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ  230 (359)
T ss_pred             ---------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123578999999999998899999999999999999999999988765544


Q ss_pred             HHHHHHhccC----------------------CC------------------CCCCCChHHHHHHHHhcccCccccCCCc
Q 025601          161 LANIVARALE----------------------FP------------------KEPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       161 ~~~i~~~~~~----------------------~p------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      +..++.....                      .+                  .....+.++.+||.+||+.||++|||  
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t--  308 (359)
T cd07876         231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRIS--  308 (359)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCC--
Confidence            4333321111                      00                  00123577899999999999999999  


Q ss_pred             cChHHHhcCCCCCC
Q 025601          201 KGASAIKHHPFFQG  214 (250)
Q Consensus       201 ~~a~~ll~hp~~~~  214 (250)
                        +.++|+||||..
T Consensus       309 --~~e~l~hp~~~~  320 (359)
T cd07876         309 --VDEALRHPYITV  320 (359)
T ss_pred             --HHHHhcCchhhh
Confidence              999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=3.1e-29  Score=214.09  Aligned_cols=158  Identities=44%  Similarity=0.881  Sum_probs=128.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       116 ~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  153 (318)
T cd05582         116 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK------------------------------------------  153 (318)
T ss_pred             HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC------------------------------------------
Confidence            36999999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+......
T Consensus       154 ---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~  206 (318)
T cd05582         154 ---------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET  206 (318)
T ss_pred             ---------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH
Confidence                                       01123688999999999988889999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccccc--CCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLRC--TTPPFVP  229 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~~--~~~~~~~  229 (250)
                      ...+......++  ..++..+.+||.+||+.||++|+++.+ .+++++.||||..++|..+..  ..+|+.|
T Consensus       207 ~~~i~~~~~~~p--~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (318)
T cd05582         207 MTMILKAKLGMP--QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKP  276 (318)
T ss_pred             HHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCC
Confidence            777766555443  468999999999999999999999654 478899999999999987643  3344444

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.95  E-value=1.9e-28  Score=206.40  Aligned_cols=139  Identities=30%  Similarity=0.490  Sum_probs=109.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       121 ~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~------------------------------------------  158 (288)
T cd07871         121 KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK------------------------------------------  158 (288)
T ss_pred             hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc------------------------------------------
Confidence            46999999999999999999999999998744221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+..+
T Consensus       159 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~  211 (288)
T cd07871         159 ---------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE  211 (288)
T ss_pred             ---------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       0001257889999999876 458999999999999999999999999887766


Q ss_pred             HHHHHHHhccC-------------------CCC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALE-------------------FPK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~-------------------~p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .+..+......                   ++.         ...++.++.+||.+||+.||.+|+|    ++++|.|||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t----~~~~l~hp~  287 (288)
T cd07871         212 ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS----AEAALRHSY  287 (288)
T ss_pred             HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcCCC
Confidence            66555432211                   111         1245788999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       288 f  288 (288)
T cd07871         288 F  288 (288)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.95  E-value=2.1e-28  Score=205.63  Aligned_cols=140  Identities=29%  Similarity=0.434  Sum_probs=109.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.........                                         
T Consensus       118 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----------------------------------------  156 (287)
T cd07848         118 KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA-----------------------------------------  156 (287)
T ss_pred             HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc-----------------------------------------
Confidence            368999999999999999999999999988543211100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+....
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~  209 (287)
T cd07848         157 ---------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ  209 (287)
T ss_pred             ---------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123578999999999988899999999999999999999999998776555


Q ss_pred             HHHHHHhccCCC-------------------C-----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFP-------------------K-----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p-------------------~-----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ...+.......+                   .           ...++..+.+||.+||++||++|+|    ++++|.||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s----~~~~l~hp  285 (287)
T cd07848         210 LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL----TEQCLNHP  285 (287)
T ss_pred             HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC----HHHHhcCC
Confidence            444433211111                   0           0126778999999999999999999    99999999


Q ss_pred             CC
Q 025601          211 FF  212 (250)
Q Consensus       211 ~~  212 (250)
                      ||
T Consensus       286 ~f  287 (287)
T cd07848         286 AF  287 (287)
T ss_pred             CC
Confidence            98

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.8e-28  Score=213.92  Aligned_cols=144  Identities=28%  Similarity=0.403  Sum_probs=108.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+||+++.++.+||+|||+++.......                                          
T Consensus       200 ~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~------------------------------------------  237 (391)
T PHA03212        200 ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA------------------------------------------  237 (391)
T ss_pred             hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc------------------------------------------
Confidence            36999999999999999999999999998853211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----  156 (250)
                                                .....+.||+.|+|||++.+..++.++|||||||++|+|++|..||.+..    
T Consensus       238 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        238 --------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             --------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence                                      00112468999999999998889999999999999999999998875421    


Q ss_pred             ---hHHHHHHHHHhccCCCC---------------------------------CCCCChHHHHHHHHhcccCccccCCCc
Q 025601          157 ---HELTLANIVARALEFPK---------------------------------EPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~~p~---------------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                         ...++..++...+..+.                                 ...++.++.+||.+||++||++|||  
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpt--  369 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPS--  369 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCC--
Confidence               12233333322221110                                 0124667899999999999999999  


Q ss_pred             cChHHHhcCCCCCCCC
Q 025601          201 KGASAIKHHPFFQGVN  216 (250)
Q Consensus       201 ~~a~~ll~hp~~~~~~  216 (250)
                        |+++|+||||+.+.
T Consensus       370 --a~elL~hp~f~~~~  383 (391)
T PHA03212        370 --AEALLDFAAFQDIP  383 (391)
T ss_pred             --HHHHhcChhhccCC
Confidence              99999999998743

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.6e-28  Score=209.66  Aligned_cols=159  Identities=40%  Similarity=0.750  Sum_probs=123.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||++.........                                         
T Consensus       120 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----------------------------------------  158 (331)
T cd05597         120 QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV-----------------------------------------  158 (331)
T ss_pred             hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc-----------------------------------------
Confidence            468999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......||+.|+|||++.+     ..++.++||||+||++|+|++|+.||.+.
T Consensus       159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         159 ---------------------------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             ---------------------------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence                                       0001258999999999873     34688999999999999999999999988


Q ss_pred             ChHHHHHHHHHhccC--CCC-CCCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCccccccCCCCCCCC
Q 025601          156 DHELTLANIVARALE--FPK-EPAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP  230 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~--~p~-~~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~  230 (250)
                      ...+....++.....  ++. ...++..+.+||.+||..++++  |++    +++++.||||.+++|..+....+|++|.
T Consensus       212 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~----~~~~l~hp~~~~~~~~~~~~~~~~~~~~  287 (331)
T cd05597         212 SLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNG----LQDFKDHPFFEGIDWDNIRNSTAPYVPE  287 (331)
T ss_pred             CHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCC----HHHHhcCCCCCCCCHHHHhhCCCCccCc
Confidence            777777666654322  222 2347899999999998764433  667    9999999999999999988877777765


Q ss_pred             C
Q 025601          231 P  231 (250)
Q Consensus       231 ~  231 (250)
                      .
T Consensus       288 ~  288 (331)
T cd05597         288 V  288 (331)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=1e-28  Score=212.12  Aligned_cols=164  Identities=37%  Similarity=0.700  Sum_probs=127.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++........                                         
T Consensus       120 ~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-----------------------------------------  158 (331)
T cd05624         120 QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-----------------------------------------  158 (331)
T ss_pred             HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce-----------------------------------------
Confidence            369999999999999999999999999988543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......||+.|+|||++.+     ..++.++||||+||++|+|++|+.||.+.
T Consensus       159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~  211 (331)
T cd05624         159 ---------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             ---------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence                                       0001358999999999875     45788999999999999999999999988


Q ss_pred             ChHHHHHHHHHhccCCCCC---CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCC
Q 025601          156 DHELTLANIVARALEFPKE---PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPF  232 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~---~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~  232 (250)
                      ...+....+.......+.+   ..++.++.+||.+||..++++ +. ...+++++.||||++++|..+....+|++|...
T Consensus       212 ~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~-~~-~~~~~~~~~h~~f~~~~~~~~~~~~~~~~p~~~  289 (331)
T cd05624         212 SLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERR-LG-QNGIEDFKKHAFFEGIDWENIRNLEAPYIPDVS  289 (331)
T ss_pred             CHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhh-cC-CCCHHHHhcCCCcCCCCHHHHhhCCCCccCCCC
Confidence            8777777776544332222   346899999999999876543 32 123999999999999999999888888888764


Q ss_pred             Cc
Q 025601          233 NR  234 (250)
Q Consensus       233 ~~  234 (250)
                      ..
T Consensus       290 ~~  291 (331)
T cd05624         290 SP  291 (331)
T ss_pred             Cc
Confidence            43

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=2.1e-28  Score=205.84  Aligned_cols=160  Identities=37%  Similarity=0.695  Sum_probs=123.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       120 ~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~------------------------------------------  157 (285)
T cd05630         120 QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT------------------------------------------  157 (285)
T ss_pred             hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc------------------------------------------
Confidence            36999999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                                  .....|+..|+|||++.+..++.++||||+||++|+|++|..||.+....  
T Consensus       158 ----------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~  209 (285)
T cd05630         158 ----------------------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK  209 (285)
T ss_pred             ----------------------------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch
Confidence                                        00125789999999999888999999999999999999999999875432  


Q ss_pred             -HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCCC
Q 025601          159 -LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPPP  231 (250)
Q Consensus       159 -~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~  231 (250)
                       .....+.... .......++..+.+|+.+||+.||++|+|+. ..+++++.||||++++|.++..  .+||+.|.|
T Consensus       210 ~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~  285 (285)
T cd05630         210 REEVERLVKEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPDP  285 (285)
T ss_pred             HHHHHhhhhhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCCC
Confidence             2222222211 1122346889999999999999999999844 2478999999999999987755  667887764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=5.4e-28  Score=209.46  Aligned_cols=140  Identities=30%  Similarity=0.491  Sum_probs=109.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       137 ~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------  173 (355)
T cd07874         137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------  173 (355)
T ss_pred             hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc-------------------------------------------
Confidence            3699999999999999999999999999985432110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+|..|+|||++.+..++.++|||||||++|+|++|+.||.+......
T Consensus       174 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  226 (355)
T cd07874         174 ---------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_pred             ---------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00123588999999999998899999999999999999999999998775555


Q ss_pred             HHHHHHhccCC------------------------------------C----CCCCCChHHHHHHHHhcccCccccCCCc
Q 025601          161 LANIVARALEF------------------------------------P----KEPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       161 ~~~i~~~~~~~------------------------------------p----~~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      +..++......                                    +    .....+.++.+||.+||+.||++|||  
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps--  304 (355)
T cd07874         227 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS--  304 (355)
T ss_pred             HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCC--
Confidence            44433321110                                    0    00123567899999999999999999  


Q ss_pred             cChHHHhcCCCCCC
Q 025601          201 KGASAIKHHPFFQG  214 (250)
Q Consensus       201 ~~a~~ll~hp~~~~  214 (250)
                        +.++|+||||..
T Consensus       305 --~~ell~hp~~~~  316 (355)
T cd07874         305 --VDEALQHPYINV  316 (355)
T ss_pred             --HHHHhcCcchhc
Confidence              999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.95  E-value=3.6e-28  Score=209.02  Aligned_cols=136  Identities=29%  Similarity=0.427  Sum_probs=114.2

Q ss_pred             Ccc-ceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLG-IVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~g-iiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +++ |||||||++|||++.++ ++||+|||+++.......                                        
T Consensus       160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~----------------------------------------  199 (362)
T KOG0192|consen  160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT----------------------------------------  199 (362)
T ss_pred             cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc----------------------------------------
Confidence            357 99999999999999997 999999999866543210                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS--GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                   ...+..||..|||||++.  ...|+.++||||||+++|||+||+.||.+..
T Consensus       200 -----------------------------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~  250 (362)
T KOG0192|consen  200 -----------------------------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA  250 (362)
T ss_pred             -----------------------------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence                                         001136999999999999  5579999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHH
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASA  205 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~  205 (250)
                      .......++......+.+..+++.+..||.+||..||..||+|.+.+..
T Consensus       251 ~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~  299 (362)
T KOG0192|consen  251 PVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR  299 (362)
T ss_pred             HHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence            8777777776666666666799999999999999999999998775544

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=5e-28  Score=212.48  Aligned_cols=152  Identities=26%  Similarity=0.369  Sum_probs=116.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.++|+|||++.........                                         
T Consensus       203 ~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~-----------------------------------------  241 (392)
T PHA03207        203 GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT-----------------------------------------  241 (392)
T ss_pred             HCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc-----------------------------------------
Confidence            369999999999999999999999999988543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH---  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~---  157 (250)
                                                .....+.||+.|+|||++.+..++.++|||||||++|+|++|..||.+...   
T Consensus       242 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~  295 (392)
T PHA03207        242 --------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS  295 (392)
T ss_pred             --------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc
Confidence                                      001134689999999999988899999999999999999999999976542   


Q ss_pred             HHHHHHHHHhccCCC----C----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHH
Q 025601          158 ELTLANIVARALEFP----K----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASA  205 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p----~----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~  205 (250)
                      ...+..++......+    .                            ...++.++.+||.+||+.||++||+    +.+
T Consensus       296 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps----a~e  371 (392)
T PHA03207        296 SSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS----AQD  371 (392)
T ss_pred             HHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC----HHH
Confidence            223333332111100    0                            0234677899999999999999999    999


Q ss_pred             HhcCCCCCCCCccccccC
Q 025601          206 IKHHPFFQGVNWALLRCT  223 (250)
Q Consensus       206 ll~hp~~~~~~~~~~~~~  223 (250)
                      +|.||||...+|+.+.-.
T Consensus       372 ~l~~p~f~~~~~~~~~~~  389 (392)
T PHA03207        372 ILSLPLFTKEPINLLNIT  389 (392)
T ss_pred             HhhCchhhccchhhhcCc
Confidence            999999999999887643

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.95  E-value=6.2e-28  Score=202.72  Aligned_cols=138  Identities=33%  Similarity=0.504  Sum_probs=110.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++........                                          
T Consensus       126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  163 (288)
T cd07863         126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA------------------------------------------  163 (288)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEECccCccccccCccc------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....+|..|+|||++.+..++.++||||+||++|+|++|..||.+......
T Consensus       164 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~  215 (288)
T cd07863         164 ----------------------------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ  215 (288)
T ss_pred             ----------------------------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH
Confidence                                        0012578899999999988899999999999999999999999988877766


Q ss_pred             HHHHHHhccC-----CC--------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALE-----FP--------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~-----~p--------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +.++......     ++                    ....++..+.+||.+||+.||++|||    +.+++.||||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~~~l~hp~f  288 (288)
T cd07863         216 LGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS----AFRALQHPFF  288 (288)
T ss_pred             HHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence            6665542210     00                    01246778899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.6e-28  Score=212.76  Aligned_cols=143  Identities=32%  Similarity=0.543  Sum_probs=107.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||||.||||.|||+ ..|.+||.|||+|..+......-.                                       
T Consensus       478 ~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~---------------------------------------  517 (677)
T KOG0596|consen  478 QHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV---------------------------------------  517 (677)
T ss_pred             HhceeecCCCcccEEE-EeeeEEeeeechhcccCcccccee---------------------------------------
Confidence            5899999999999999 789999999999976654322111                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-----------CCCchhHHHHHHHHHHHHHhCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-----------GHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                  ..+-+||+.||+||.+...           +.+.++|||||||+||+|+.|+
T Consensus       518 ----------------------------kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgk  569 (677)
T KOG0596|consen  518 ----------------------------KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGK  569 (677)
T ss_pred             ----------------------------eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcC
Confidence                                        1134899999999988531           1578999999999999999999


Q ss_pred             CCCCCCC-hHHHHHHHHHhcc--CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          150 TPFRGVD-HELTLANIVARAL--EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       150 ~pf~~~~-~~~~~~~i~~~~~--~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .||..-. ....+..|.+..-  .+|.... ..+++++|+.||++||++||+    +.+||+|||+....
T Consensus       570 tPf~~~~n~~aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~s----i~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  570 TPFGQIINQIAKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWS----IPELLQHPFLQIQP  634 (677)
T ss_pred             CchHHHHHHHHHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCC----cHHHhcCccccccc
Confidence            9996432 2222222333222  3333322 344999999999999999999    99999999998754

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.95  E-value=1.4e-27  Score=205.13  Aligned_cols=141  Identities=30%  Similarity=0.448  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.......                                            
T Consensus       123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------  158 (331)
T cd06649         123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------------------------------------------  158 (331)
T ss_pred             CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc--------------------------------------------
Confidence            369999999999999999999999999874432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....||..|+|||++.+..++.++|||||||++|+|++|+.||......+..
T Consensus       159 ---------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  211 (331)
T cd06649         159 ---------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE  211 (331)
T ss_pred             ---------------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                       01235889999999999888999999999999999999999999765543322


Q ss_pred             HHH----------------------------------------------HHhccCCCCCCCCChHHHHHHHHhcccCccc
Q 025601          162 ANI----------------------------------------------VARALEFPKEPAVPATAKDLISQLLAKDPER  195 (250)
Q Consensus       162 ~~i----------------------------------------------~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~  195 (250)
                      ..+                                              .....+......++.++++||.+||++||++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~  291 (331)
T cd06649         212 AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAE  291 (331)
T ss_pred             HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCccc
Confidence            111                                              1111111111246789999999999999999


Q ss_pred             cCCCccChHHHhcCCCCCCCCc
Q 025601          196 RLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       196 R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      |||    +++++.||||+....
T Consensus       292 Rpt----~~ell~h~~~~~~~~  309 (331)
T cd06649         292 RAD----LKMLMNHTFIKRSEV  309 (331)
T ss_pred             CCC----HHHHhcChHHhhccc
Confidence            999    999999999987654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.7e-27  Score=205.43  Aligned_cols=139  Identities=34%  Similarity=0.513  Sum_probs=109.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.....                                             
T Consensus       137 ~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------  171 (343)
T cd07878         137 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE---------------------------------------------  171 (343)
T ss_pred             CCeecccCChhhEEECCCCCEEEcCCccceecCCC---------------------------------------------
Confidence            69999999999999999999999999987542210                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus       172 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  224 (343)
T cd07878         172 ---------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ  224 (343)
T ss_pred             ---------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                                       012368899999999987 4589999999999999999999999988765555


Q ss_pred             HHHHHHhccCC-----------------------CC------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEF-----------------------PK------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~-----------------------p~------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+.......                       +.      ...+++.+.+||.+||+.||++|||    ++++|.|||
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s----~~ell~hp~  300 (343)
T cd07878         225 LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS----ASEALAHPY  300 (343)
T ss_pred             HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcc
Confidence            54443321110                       00      0235567899999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |....
T Consensus       301 ~~~~~  305 (343)
T cd07878         301 FSQYH  305 (343)
T ss_pred             hhccC
Confidence            98754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=1.3e-27  Score=200.46  Aligned_cols=158  Identities=34%  Similarity=0.700  Sum_probs=118.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++.......                                            
T Consensus       116 ~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------  151 (279)
T cd05633         116 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------------------------------------------  151 (279)
T ss_pred             CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--------------------------------------------
Confidence            689999999999999999999999999874321110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVD--HE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~--~~  158 (250)
                                                 .....|+..|+|||++.+ ..++.++||||+||++|+|++|..||....  ..
T Consensus       152 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  204 (279)
T cd05633         152 ---------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK  204 (279)
T ss_pred             ---------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH
Confidence                                       001247889999999864 557899999999999999999999997543  22


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      ..+..+.. ......+..++.++.+||.+||..||++|++.. ..++++++||||++.+|...  .+..+|.+|++
T Consensus       205 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~  279 (279)
T cd05633         205 HEIDRMTL-TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQKYPPPLIPPR  279 (279)
T ss_pred             HHHHHHhh-cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcCCCCCCCCCCC
Confidence            22222221 222233456899999999999999999999422 33999999999999999765  34445666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.95  E-value=5.1e-27  Score=199.15  Aligned_cols=177  Identities=40%  Similarity=0.690  Sum_probs=133.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++................                                 
T Consensus       119 ~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~---------------------------------  165 (305)
T cd05609         119 NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIE---------------------------------  165 (305)
T ss_pred             HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccc---------------------------------
Confidence            36899999999999999999999999998754221110000000000                                 


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                           ............++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+.
T Consensus       166 ---------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~  224 (305)
T cd05609         166 ---------------------KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL  224 (305)
T ss_pred             ---------------------cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                 00000000113577899999999888899999999999999999999999998877777


Q ss_pred             HHHHHHhccCCCCC-CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCC
Q 025601          161 LANIVARALEFPKE-PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPF  232 (250)
Q Consensus       161 ~~~i~~~~~~~p~~-~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~  232 (250)
                      ..++.......+.. ..++.++.+||.+||+.+|++||++.+ +.+++.||||.+.+|..+.....+++|++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~-~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  296 (305)
T cd05609         225 FGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGG-AFEVKQHRFFLGLDWNGLLRQKAEFIPQLE  296 (305)
T ss_pred             HHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccC-HHHHHhCccccCCCHHHHhhcCCCCCCCCC
Confidence            77666654444433 257899999999999999999999644 889999999999999988777778888873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=3e-27  Score=206.13  Aligned_cols=145  Identities=28%  Similarity=0.381  Sum_probs=112.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||++.........                                         
T Consensus       121 ~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~-----------------------------------------  159 (372)
T cd07853         121 SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK-----------------------------------------  159 (372)
T ss_pred             hCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc-----------------------------------------
Confidence            368999999999999999999999999987542211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+.+...
T Consensus       160 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  212 (372)
T cd07853         160 ---------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ  212 (372)
T ss_pred             ---------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH
Confidence                                       000125788999999998754 7999999999999999999999999887666


Q ss_pred             HHHHHHHhccC-----------------------C-------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALE-----------------------F-------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~-----------------------~-------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .+..+....+.                       .       ......+.++.+||.+||+.||++|||    +++++.|
T Consensus       213 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t----~~e~l~h  288 (372)
T cd07853         213 QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS----AADALAH  288 (372)
T ss_pred             HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC----HHHHhcC
Confidence            65554432110                       0       112345788999999999999999999    9999999


Q ss_pred             CCCCCCCc
Q 025601          210 PFFQGVNW  217 (250)
Q Consensus       210 p~~~~~~~  217 (250)
                      |||++..+
T Consensus       289 p~~~~~~~  296 (372)
T cd07853         289 PYLDEGRL  296 (372)
T ss_pred             HhhCCCcc
Confidence            99998654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=7.9e-28  Score=189.40  Aligned_cols=136  Identities=37%  Similarity=0.716  Sum_probs=121.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++||||||||+|+|++..|.+|++|||.+-...                                               
T Consensus       143 k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------------------------------------  175 (281)
T KOG0580|consen  143 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------------------------------  175 (281)
T ss_pred             CCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------------------------------------
Confidence            689999999999999999999999999863221                                               


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                              ..+...++||.-|.+||+..+..++..+|+|++|++.||++.|..||...+..+++
T Consensus       176 ------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etY  231 (281)
T KOG0580|consen  176 ------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETY  231 (281)
T ss_pred             ------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHH
Confidence                                    11222468999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+|.+....+|  ..++.++.+||.+||.++|.+|.+    ..++++|||+..
T Consensus       232 krI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~----l~~v~~hpwI~a  278 (281)
T KOG0580|consen  232 KRIRKVDLKFP--STISGGAADLISRLLVKNPIERLA----LTEVMDHPWIVA  278 (281)
T ss_pred             HHHHHccccCC--cccChhHHHHHHHHhccCcccccc----HHHHhhhHHHHh
Confidence            99988877777  579999999999999999999999    999999999864

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-27  Score=209.99  Aligned_cols=133  Identities=37%  Similarity=0.596  Sum_probs=111.6

Q ss_pred             CccceeecCCCCcEEe-CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLV-RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill-~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      .+|||||||||+|||+ +..++++|+|||.++.......                                         
T Consensus       433 ~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~-----------------------------------------  471 (612)
T KOG0603|consen  433 EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD-----------------------------------------  471 (612)
T ss_pred             hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc-----------------------------------------
Confidence            3799999999999999 5889999999998865443200                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                     .-+-|..|.|||++....|+.++|+||||++||+|++|+.||.......
T Consensus       472 -------------------------------tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~  520 (612)
T KOG0603|consen  472 -------------------------------TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI  520 (612)
T ss_pred             -------------------------------ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH
Confidence                                           0146789999999998889999999999999999999999999888774


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+.+.   ....+....+|.++++||..||++||++|++    +.+++.||||
T Consensus       521 ei~~~---i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~----~~~i~~h~w~  566 (612)
T KOG0603|consen  521 EIHTR---IQMPKFSECVSDEAKDLLQQLLQVDPALRLG----ADEIGAHPWF  566 (612)
T ss_pred             HHHHh---hcCCccccccCHHHHHHHHHhccCChhhCcC----hhhhccCcch
Confidence            43333   2233333679999999999999999999999    9999999999

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-27  Score=206.38  Aligned_cols=142  Identities=39%  Similarity=0.695  Sum_probs=123.0

Q ss_pred             CccceeecCCCCcEEeCCC----CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD----GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~----~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      ++||+||||||+|+|+...    +.+|++|||++.......                                       
T Consensus       153 ~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~---------------------------------------  193 (382)
T KOG0032|consen  153 SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE---------------------------------------  193 (382)
T ss_pred             hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc---------------------------------------
Confidence            3699999999999999743    479999999986654411                                       


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                     .....+||+.|+|||++.+..|+..+||||+|+++|.|++|..||.+..
T Consensus       194 -------------------------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~  242 (382)
T KOG0032|consen  194 -------------------------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET  242 (382)
T ss_pred             -------------------------------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence                                           1113589999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          157 HELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ......++..+...+..+  ..++..+++||.+||..||.+|+|    |.++|.|||+.+..
T Consensus       243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t----a~~~L~HpWi~~~~  300 (382)
T KOG0032|consen  243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT----AAQALQHPWIKSIG  300 (382)
T ss_pred             hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC----HHHHhcCccccCCc
Confidence            888888888887765554  568999999999999999999999    99999999999853

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=1.6e-27  Score=214.95  Aligned_cols=143  Identities=29%  Similarity=0.500  Sum_probs=118.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++........                                         
T Consensus       161 ~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-----------------------------------------  199 (496)
T PTZ00283        161 SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-----------------------------------------  199 (496)
T ss_pred             hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-----------------------------------------
Confidence            368999999999999999999999999998653321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       200 --------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~  253 (496)
T PTZ00283        200 --------------------------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV  253 (496)
T ss_pred             --------------------------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                                      000124689999999999998899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +..++..... +.+..++.++.+|+.+||+.||++||+    +.+++.|||++..
T Consensus       254 ~~~~~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs----~~ell~~p~~~~~  303 (496)
T PTZ00283        254 MHKTLAGRYD-PLPPSISPEMQEIVTALLSSDPKRRPS----SSKLLNMPICKLF  303 (496)
T ss_pred             HHHHhcCCCC-CCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHhCHHHHHh
Confidence            7666654433 445678999999999999999999999    9999999998753

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=5.9e-27  Score=197.33  Aligned_cols=157  Identities=41%  Similarity=0.767  Sum_probs=126.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||+|+||+++.++.+||+|||++......                                             
T Consensus       120 ~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---------------------------------------------  154 (290)
T cd05580         120 LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---------------------------------------------  154 (290)
T ss_pred             CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---------------------------------------------
Confidence            68999999999999999999999999987543221                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....+++.|+|||.+.+..++.++||||||+++|+|++|..||.........
T Consensus       155 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  207 (290)
T cd05580         155 ---------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY  207 (290)
T ss_pred             ---------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                       00125788999999998888899999999999999999999999887766666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCccccc--cCCCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLR--CTTPPFVPPPF  232 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~  232 (250)
                      .++......  .+..++..+.++|.+||..+|++|++.. +.+++++.||||+.++|..+.  ..+.|+.|+..
T Consensus       208 ~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (290)
T cd05580         208 EKILEGKVR--FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVK  279 (290)
T ss_pred             HHHhcCCcc--CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCCC
Confidence            666544433  3446799999999999999999999322 349999999999999998763  34556655543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=1.7e-27  Score=194.53  Aligned_cols=153  Identities=31%  Similarity=0.483  Sum_probs=122.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||++..++.+||.|||++......                                            
T Consensus       136 s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--------------------------------------------  171 (369)
T KOG0665|consen  136 SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--------------------------------------------  171 (369)
T ss_pred             hcceeecccCcccceecchhheeeccchhhcccCcc--------------------------------------------
Confidence            369999999999999999999999999998443221                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ....-.+.|..|+|||++.+-++...+||||+||++.||++|...|.|....++
T Consensus       172 --------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ  225 (369)
T KOG0665|consen  172 --------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQ  225 (369)
T ss_pred             --------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHH
Confidence                                      112234788999999999998899999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCCC----------------------------------------CCCChHHHHHHHHhcccCccccCCCc
Q 025601          161 LANIVARALEFPKE----------------------------------------PAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       161 ~~~i~~~~~~~p~~----------------------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      +.+++...+.....                                        ..-+..+.+++.+||..+|++|.+  
T Consensus       226 ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ris--  303 (369)
T KOG0665|consen  226 WNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRIS--  303 (369)
T ss_pred             HHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhccc--
Confidence            77776543331111                                        112355889999999999999999  


Q ss_pred             cChHHHhcCCCCCCCCccccccCCCCCCC
Q 025601          201 KGASAIKHHPFFQGVNWALLRCTTPPFVP  229 (250)
Q Consensus       201 ~~a~~ll~hp~~~~~~~~~~~~~~~~~~~  229 (250)
                        ++++|.||||+  -|-.-.++..|..+
T Consensus       304 --v~daL~HPY~~--vw~~~~ev~ap~pe  328 (369)
T KOG0665|consen  304 --VDDALRHPYIK--VWYDPDEVEAPPPE  328 (369)
T ss_pred             --HHHHhcCCeee--eecccccccCCCCc
Confidence              99999999999  57555555444444

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.94  E-value=3.7e-27  Score=200.91  Aligned_cols=142  Identities=25%  Similarity=0.358  Sum_probs=102.1

Q ss_pred             CccceeecCCCCcEEe----CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLV----RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +.||+||||||+|||+    +.++.+||+|||+++........                                     
T Consensus       126 ~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~-------------------------------------  168 (317)
T cd07868         126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-------------------------------------  168 (317)
T ss_pred             hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc-------------------------------------
Confidence            3699999999999999    45678999999998543221100                                     


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   ........+|+.|+|||++.+. .++.++||||+||++|+|++|..||.+.
T Consensus       169 -----------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         169 -----------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             -----------------------------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence                                         0000123688999999999875 4799999999999999999999999754


Q ss_pred             Ch---------HHHHHHHHHhccCC-----------CC-------------------------CCCCChHHHHHHHHhcc
Q 025601          156 DH---------ELTLANIVARALEF-----------PK-------------------------EPAVPATAKDLISQLLA  190 (250)
Q Consensus       156 ~~---------~~~~~~i~~~~~~~-----------p~-------------------------~~~~~~~~~~ll~~~L~  190 (250)
                      ..         ...+..+....+..           +.                         ....+..+.+||.+||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~  299 (317)
T cd07868         220 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT  299 (317)
T ss_pred             cccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhc
Confidence            32         12222222211100           00                         01234568899999999


Q ss_pred             cCccccCCCccChHHHhcCCCC
Q 025601          191 KDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .||++|+|    ++++|+||||
T Consensus       300 ~dP~~R~t----~~e~l~hp~f  317 (317)
T cd07868         300 MDPIKRIT----SEQAMQDPYF  317 (317)
T ss_pred             cCcccCCC----HHHHhcCCCC
Confidence            99999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=7.4e-27  Score=202.27  Aligned_cols=142  Identities=27%  Similarity=0.431  Sum_probs=106.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.......                                          
T Consensus       186 ~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~------------------------------------------  223 (353)
T PLN00034        186 RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD------------------------------------------  223 (353)
T ss_pred             HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......||..|+|||++..     ...+.++|||||||++|+|++|+.||...
T Consensus       224 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  276 (353)
T PLN00034        224 ---------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG  276 (353)
T ss_pred             ---------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence                                       0012368899999998853     22456899999999999999999999743


Q ss_pred             ChHH--HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          156 DHEL--TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       156 ~~~~--~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ....  .+...+...........++.++.+||.+||+.||++||+    +.+++.||||.+-
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt----~~ell~hp~~~~~  334 (353)
T PLN00034        277 RQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWS----AMQLLQHPFILRA  334 (353)
T ss_pred             CCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccccC
Confidence            3221  111111122222334568899999999999999999999    9999999999985

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=8.3e-28  Score=207.90  Aligned_cols=132  Identities=27%  Similarity=0.436  Sum_probs=111.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++++|||||..+|||++.+..+||+||||++...........                                      
T Consensus       321 s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~--------------------------------------  362 (468)
T KOG0197|consen  321 SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE--------------------------------------  362 (468)
T ss_pred             hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecC--------------------------------------
Confidence            468999999999999999999999999999843322111000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                    +-.-...|.|||.+....++.++||||||++||||+| |+.|+.++++.+
T Consensus       363 ------------------------------~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e  412 (468)
T KOG0197|consen  363 ------------------------------GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE  412 (468)
T ss_pred             ------------------------------CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH
Confidence                                          0012357999999999999999999999999999996 999999999888


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ++..+ +.+.++|.+..||+++.++|..||+.+|++||||..
T Consensus       413 v~~~l-e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~  453 (468)
T KOG0197|consen  413 VLELL-ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFET  453 (468)
T ss_pred             HHHHH-hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHH
Confidence            88665 778899999999999999999999999999999764

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.94  E-value=5e-27  Score=199.59  Aligned_cols=143  Identities=26%  Similarity=0.463  Sum_probs=110.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++........                                         
T Consensus       122 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----------------------------------------  160 (309)
T cd07872         122 RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT-----------------------------------------  160 (309)
T ss_pred             HCCeecCCCCHHHEEECCCCCEEECccccceecCCCccc-----------------------------------------
Confidence            369999999999999999999999999987442211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....+|..|+|||++.+. .++.++||||+||++|+|++|+.||.+.+..+
T Consensus       161 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         161 ----------------------------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             ----------------------------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                                        0012468899999998764 47999999999999999999999998877665


Q ss_pred             HHHHHHHhccC-------------------CC---------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALE-------------------FP---------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~-------------------~p---------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .+..+......                   .+         ....++.++.+||.+||+.||.+|+|    +++++.|||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~~  288 (309)
T cd07872         213 ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS----AEEAMKHAY  288 (309)
T ss_pred             HHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC----HHHHhcChh
Confidence            55444332111                   01         11246788999999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |+...
T Consensus       289 ~~~~~  293 (309)
T cd07872         289 FRSLG  293 (309)
T ss_pred             hhhcc
Confidence            99753

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.6e-27  Score=208.27  Aligned_cols=143  Identities=30%  Similarity=0.456  Sum_probs=122.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .+|||||||..|||+..+|.++|+|||++-......                                            
T Consensus       149 ~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~--------------------------------------------  184 (1187)
T KOG0579|consen  149 QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR--------------------------------------------  184 (1187)
T ss_pred             cchhhhhccccceEEEecCcEeeecccccccchhHH--------------------------------------------
Confidence            579999999999999999999999999863321111                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                               -+..+|+|||.|||||+..     ..+|+.++||||||++|.||..+.+|.+..+
T Consensus       185 -------------------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln  239 (1187)
T KOG0579|consen  185 -------------------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN  239 (1187)
T ss_pred             -------------------------hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc
Confidence                                     1223689999999999875     4569999999999999999999999999999


Q ss_pred             hHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          157 HELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       157 ~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ...++.+|.+...+ ...+...+..+.+|+.+||.+||..||+    +.+||.||||.+++.
T Consensus       240 pMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~----aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  240 PMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP----AAQLLKHPFVQNAPS  297 (1187)
T ss_pred             hHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC----HHHHhhCcccccCCc
Confidence            99999998886654 3345567889999999999999999999    999999999998754

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.8e-27  Score=192.58  Aligned_cols=162  Identities=40%  Similarity=0.785  Sum_probs=132.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|||.||||.+|+|++..|++||.|+|+++.-....+                                          
T Consensus       369 ~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd------------------------------------------  406 (593)
T KOG0695|consen  369 ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD------------------------------------------  406 (593)
T ss_pred             hcCeeeeeccccceEEccCCceeecccchhhcCCCCCc------------------------------------------
Confidence            47999999999999999999999999999866433221                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCC--C---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG--V---  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~--~---  155 (250)
                                                 .+..|+||+.|+|||.+.|..|+..+|.|+||++++||+.|+.||.-  +   
T Consensus       407 ---------------------------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~  459 (593)
T KOG0695|consen  407 ---------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP  459 (593)
T ss_pred             ---------------------------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence                                       23357999999999999999999999999999999999999999952  2   


Q ss_pred             --ChHHHHHH-HHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc--ChHHHhcCCCCCCCCcccccc--CCCCCC
Q 025601          156 --DHELTLAN-IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK--GASAIKHHPFFQGVNWALLRC--TTPPFV  228 (250)
Q Consensus       156 --~~~~~~~~-i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~--~a~~ll~hp~~~~~~~~~~~~--~~~~~~  228 (250)
                        +.++.+.+ |++.+..+|.  .++-.+..+++..|.+||.+|.....  ..+++..|+||+.++|..+..  +-|||-
T Consensus       460 d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~  537 (593)
T KOG0695|consen  460 DMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQ  537 (593)
T ss_pred             ccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCC
Confidence              22233333 5566666655  68888899999999999999998653  578999999999999998844  667777


Q ss_pred             CCCCC
Q 025601          229 PPPFN  233 (250)
Q Consensus       229 ~~~~~  233 (250)
                      |...+
T Consensus       538 p~i~~  542 (593)
T KOG0695|consen  538 PQITD  542 (593)
T ss_pred             Ccccc
Confidence            76643

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=4.2e-27  Score=196.88  Aligned_cols=159  Identities=37%  Similarity=0.702  Sum_probs=121.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||+|+||+++.++.++|+|||++........                                          
T Consensus       113 ~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  150 (277)
T cd05577         113 QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK------------------------------------------  150 (277)
T ss_pred             hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc------------------------------------------
Confidence            36899999999999999999999999998744221000                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....++..|+|||++.+..++.++||||+||++++|++|..||.+......
T Consensus       151 ----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  202 (277)
T cd05577         151 ----------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE  202 (277)
T ss_pred             ----------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc
Confidence                                        0012467789999999887789999999999999999999999977653222


Q ss_pred             HHHHHHh--ccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccccc--CCCCCCC
Q 025601          161 LANIVAR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLRC--TTPPFVP  229 (250)
Q Consensus       161 ~~~i~~~--~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~~--~~~~~~~  229 (250)
                      ...+...  ......+..++..+.++|.+||+.+|++||++.+ .+.+++.||||+.++|.++..  .+||+.|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd05577         203 KEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP  276 (277)
T ss_pred             HHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCC
Confidence            2222211  1122333467899999999999999999998777 799999999999999977633  3455544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.9e-28  Score=202.97  Aligned_cols=100  Identities=32%  Similarity=0.529  Sum_probs=83.4

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-----------------
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-----------------  174 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-----------------  174 (250)
                      ++.|..|+|||++.+-+|+.++||||+||||+||.+|...|...++.++++-|-.-.+++|..                 
T Consensus       269 iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rld  348 (415)
T KOG0671|consen  269 IVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLD  348 (415)
T ss_pred             eeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhccccc
Confidence            578999999999999999999999999999999999999999999888764433333333332                 


Q ss_pred             ---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          175 ---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       175 ---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                                                 ...-.++.+||++||.+||.+|+|    ++|+|.||||...
T Consensus       349 w~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT----l~EAL~HpFF~~~  412 (415)
T KOG0671|consen  349 WPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT----LREALSHPFFARL  412 (415)
T ss_pred             CccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc----HHHHhcCHHhhcC
Confidence                                       011144889999999999999999    9999999999874

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=3.1e-27  Score=212.43  Aligned_cols=143  Identities=31%  Similarity=0.493  Sum_probs=118.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++........                                         
T Consensus       187 ~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-----------------------------------------  225 (478)
T PTZ00267        187 SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-----------------------------------------  225 (478)
T ss_pred             hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-----------------------------------------
Confidence            368999999999999999999999999998654321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.
T Consensus       226 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~  279 (478)
T PTZ00267        226 --------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREI  279 (478)
T ss_pred             --------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                      001134689999999999988899999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +..++.+... +.+..++.++.+||.+||+.||++||+    +++++.|+|++.+
T Consensus       280 ~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps----~~~~l~~~~~~~~  329 (478)
T PTZ00267        280 MQQVLYGKYD-PFPCPVSSGMKALLDPLLSKNPALRPT----TQQLLHTEFLKYV  329 (478)
T ss_pred             HHHHHhCCCC-CCCccCCHHHHHHHHHHhccChhhCcC----HHHHHhCHHHHHH
Confidence            7776655433 334568999999999999999999999    9999999998754

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.1e-26  Score=201.54  Aligned_cols=141  Identities=24%  Similarity=0.378  Sum_probs=103.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++......                                           
T Consensus       175 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------  211 (357)
T PHA03209        175 AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------  211 (357)
T ss_pred             HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-------------------------------------------
Confidence            3689999999999999999999999999874321100                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCC-CCCC---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVD---  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf-~~~~---  156 (250)
                                                 ......||..|+|||++.+..++.++|||||||++|+|+++..++ ....   
T Consensus       212 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~  264 (357)
T PHA03209        212 ---------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTP  264 (357)
T ss_pred             ---------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcH
Confidence                                       001235889999999999988999999999999999999865554 3221   


Q ss_pred             ------hHHHHHHHHHhccC----CC----------------------------CCCCCChHHHHHHHHhcccCccccCC
Q 025601          157 ------HELTLANIVARALE----FP----------------------------KEPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       157 ------~~~~~~~i~~~~~~----~p----------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                            ....+.+++.....    ++                            ....++..+.+||.+||+.||++|||
T Consensus       265 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpt  344 (357)
T PHA03209        265 EEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPS  344 (357)
T ss_pred             HHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcC
Confidence                  11222222222111    11                            01235667788999999999999999


Q ss_pred             CccChHHHhcCCCCCCC
Q 025601          199 STKGASAIKHHPFFQGV  215 (250)
Q Consensus       199 ~~~~a~~ll~hp~~~~~  215 (250)
                          |+++|+||||+++
T Consensus       345 ----a~e~l~hp~f~~~  357 (357)
T PHA03209        345 ----AEEILNYPMFAQL  357 (357)
T ss_pred             ----HHHHhcCchhccC
Confidence                9999999999874

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=1.2e-26  Score=200.82  Aligned_cols=139  Identities=32%  Similarity=0.540  Sum_probs=109.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       137 ~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-------------------------------------------  173 (353)
T cd07850         137 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM-------------------------------------------  173 (353)
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC-------------------------------------------
Confidence            6899999999999999999999999998754321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||++.+..++.++||||+||++|+|++|..||.+.+....+
T Consensus       174 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~  226 (353)
T cd07850         174 ---------------------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQW  226 (353)
T ss_pred             ---------------------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                       00124778999999999988999999999999999999999999887765555


Q ss_pred             HHHHHhccCCC------------------------------------C-----CCCCChHHHHHHHHhcccCccccCCCc
Q 025601          162 ANIVARALEFP------------------------------------K-----EPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       162 ~~i~~~~~~~p------------------------------------~-----~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      ..++...+..+                                    .     ....+..+.+||.+||+.||++||+  
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t--  304 (353)
T cd07850         227 NKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRIS--  304 (353)
T ss_pred             HHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcC--
Confidence            44433221110                                    0     1124567899999999999999999  


Q ss_pred             cChHHHhcCCCCCC
Q 025601          201 KGASAIKHHPFFQG  214 (250)
Q Consensus       201 ~~a~~ll~hp~~~~  214 (250)
                        +.++|.||||+.
T Consensus       305 --~~eiL~~~~~~~  316 (353)
T cd07850         305 --VDDALQHPYINV  316 (353)
T ss_pred             --HHHHhcChhHhh
Confidence              999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.94  E-value=1.1e-26  Score=199.67  Aligned_cols=139  Identities=32%  Similarity=0.453  Sum_probs=106.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.......                                            
T Consensus       123 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------  158 (333)
T cd06650         123 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------------------------------------------  158 (333)
T ss_pred             CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--------------------------------------------
Confidence            479999999999999999999999999874322110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....+|..|+|||++.+..++.++|||||||++|+|++|+.||.........
T Consensus       159 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~  211 (333)
T cd06650         159 ---------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE  211 (333)
T ss_pred             ---------------------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH
Confidence                                       00135789999999999888999999999999999999999999765433221


Q ss_pred             HH--------------------------------------------HHHhccCCCCCCCCChHHHHHHHHhcccCccccC
Q 025601          162 AN--------------------------------------------IVARALEFPKEPAVPATAKDLISQLLAKDPERRL  197 (250)
Q Consensus       162 ~~--------------------------------------------i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~  197 (250)
                      ..                                            +.....+......++.++++||.+||++||++||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rp  291 (333)
T cd06650         212 LMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERA  291 (333)
T ss_pred             HHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCc
Confidence            10                                            1111111111123578899999999999999999


Q ss_pred             CCccChHHHhcCCCCCCC
Q 025601          198 GSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       198 t~~~~a~~ll~hp~~~~~  215 (250)
                      +    +++++.||||+..
T Consensus       292 t----~~ell~h~~~~~~  305 (333)
T cd06650         292 D----LKQLMVHAFIKRS  305 (333)
T ss_pred             C----HHHHhhCHHHhcC
Confidence            9    9999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=7.4e-27  Score=210.97  Aligned_cols=148  Identities=25%  Similarity=0.390  Sum_probs=110.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.......                                          
T Consensus       285 ~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~------------------------------------------  322 (501)
T PHA03210        285 DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE------------------------------------------  322 (501)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc------------------------------------------
Confidence            36999999999999999999999999999855432110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCC-C--Ch
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG-V--DH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~-~--~~  157 (250)
                                                .....+.||..|+|||++.+..++.++|||||||++|||++|..++.+ .  ..
T Consensus       323 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~  376 (501)
T PHA03210        323 --------------------------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP  376 (501)
T ss_pred             --------------------------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence                                      011134689999999999998899999999999999999998765432 2  22


Q ss_pred             HHHHHHHHHhccC----CCC--------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          158 ELTLANIVARALE----FPK--------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       158 ~~~~~~i~~~~~~----~p~--------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.+++.....    ++.                          ...++..+.++|.+||++||++||+    +.++|
T Consensus       377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rps----a~elL  452 (501)
T PHA03210        377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPG----AAELL  452 (501)
T ss_pred             HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcC----HHHHh
Confidence            2333333332110    110                          0134567788899999999999999    99999


Q ss_pred             cCCCCCCCCcccc
Q 025601          208 HHPFFQGVNWALL  220 (250)
Q Consensus       208 ~hp~~~~~~~~~~  220 (250)
                      .||||........
T Consensus       453 ~hp~f~~~~~~~~  465 (501)
T PHA03210        453 ALPLFSAEEEEEI  465 (501)
T ss_pred             hChhhhcCCchHH
Confidence            9999998776543

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=7.6e-28  Score=207.32  Aligned_cols=139  Identities=29%  Similarity=0.550  Sum_probs=114.3

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      .+||+|.||||+|||+..+ ..+||||||.|.........                                        
T Consensus       554 ~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit----------------------------------------  593 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT----------------------------------------  593 (752)
T ss_pred             hcCeeecccCccceEeccCcceeeeccCcccccccccccc----------------------------------------
Confidence            4799999999999999865 67899999987443322111                                        


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                     .+.-+..|+|||++.|.+|+...|+||+||+||||.||++.|+|.+++.
T Consensus       594 -------------------------------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~  642 (752)
T KOG0670|consen  594 -------------------------------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQ  642 (752)
T ss_pred             -------------------------------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHH
Confidence                                           1123467999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCC---------------------------------------------------CCCC-------hHH
Q 025601          160 TLANIVARALEFPKE---------------------------------------------------PAVP-------ATA  181 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~---------------------------------------------------~~~~-------~~~  181 (250)
                      ++.-.++-.+.+|.-                                                   ..++       .++
T Consensus       643 MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~  722 (752)
T KOG0670|consen  643 MLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQL  722 (752)
T ss_pred             HHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHH
Confidence            888877766666553                                                   0011       458


Q ss_pred             HHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          182 KDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       182 ~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+||.+||..||++|.|    +.++|.||||.+
T Consensus       723 rdLLdkml~LdP~KRit----~nqAL~HpFi~~  751 (752)
T KOG0670|consen  723 RDLLDKMLILDPEKRIT----VNQALKHPFITE  751 (752)
T ss_pred             HHHHHHHhccChhhcCC----HHHHhcCCcccC
Confidence            89999999999999999    999999999975

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-26  Score=190.09  Aligned_cols=141  Identities=26%  Similarity=0.432  Sum_probs=113.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||+++........                                          
T Consensus       123 ~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------  160 (263)
T cd06625         123 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------------------------------------  160 (263)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                              ........++..|+|||++.+..++.++||||+||++|+|++|+.||.........
T Consensus       161 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  216 (263)
T cd06625         161 ------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI  216 (263)
T ss_pred             ------------------------cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH
Confidence                                    00001224678999999999988999999999999999999999999887666665


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .++.........+..++..+.+||.+||..+|++||+    +++++.|+||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~  263 (263)
T cd06625         217 FKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPS----AEELLRHFFV  263 (263)
T ss_pred             HHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCC----HHHHhhCCCC
Confidence            5555544444445578999999999999999999999    9999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=2.7e-26  Score=189.46  Aligned_cols=138  Identities=25%  Similarity=0.429  Sum_probs=113.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       120 ~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~------------------------------------------  157 (257)
T cd08223         120 EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD------------------------------------------  157 (257)
T ss_pred             hCCeeccCCCchhEEEecCCcEEEecccceEEecccCC------------------------------------------
Confidence            36899999999999999999999999998754322100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+++.|+|||++.+..++.++|+||+||++++|++|..||.+.+....
T Consensus       158 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~  210 (257)
T cd08223         158 ---------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL  210 (257)
T ss_pred             ---------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence                                       00012578899999999988899999999999999999999999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+...... +.+..++.++.+|+.+||+.+|++||+    +.+++.||||
T Consensus       211 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~  257 (257)
T cd08223         211 VYRIIEGKLP-PMPKDYSPELGELIATMLSKRPEKRPS----VKSILRQPYI  257 (257)
T ss_pred             HHHHHhcCCC-CCccccCHHHHHHHHHHhccCcccCCC----HHHHhcCCCC
Confidence            6555554332 334568899999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.9e-26  Score=190.90  Aligned_cols=143  Identities=43%  Similarity=0.849  Sum_probs=117.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++.....                                              
T Consensus       116 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----------------------------------------------  149 (260)
T cd05611         116 RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----------------------------------------------  149 (260)
T ss_pred             CCeecCCCCHHHeEECCCCcEEEeecccceeccc----------------------------------------------
Confidence            6899999999999999999999999998743211                                              


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||.+.+..++.++||||+|+++|+|++|..||.+.......
T Consensus       150 ---------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  202 (260)
T cd05611         150 ---------------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVF  202 (260)
T ss_pred             ---------------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                       00124778899999998877899999999999999999999999988777666


Q ss_pred             HHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          162 ANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       162 ~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      ..+.......+.  ...++..+.+++.+||+.+|++||++.. +++++.||||+.++|+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~-~~~~l~~~~~~~~~~~  260 (260)
T cd05611         203 DNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANG-YQEIKSHPFFKSINWD  260 (260)
T ss_pred             HHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCc-HHHHHcChHhhcCCCC
Confidence            666554443332  2357899999999999999999997322 6899999999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.94  E-value=2.6e-26  Score=192.42  Aligned_cols=149  Identities=33%  Similarity=0.678  Sum_probs=113.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++.......                                            
T Consensus       116 ~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  151 (278)
T cd05606         116 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------------------------------------------  151 (278)
T ss_pred             CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--------------------------------------------
Confidence            689999999999999999999999999874322110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCh--H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDH--E  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~--~  158 (250)
                                                 .....|+..|+|||++.+. .++.++||||+||++|+|++|..||.+...  .
T Consensus       152 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~  204 (278)
T cd05606         152 ---------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK  204 (278)
T ss_pred             ---------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch
Confidence                                       0012578899999998754 588999999999999999999999987632  1


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~  222 (250)
                      ........ ......+..++.++.+++.+||..+|.+|+... ..+.+++.||||+..+|..+..
T Consensus       205 ~~~~~~~~-~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~  268 (278)
T cd05606         205 HEIDRMTL-TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFL  268 (278)
T ss_pred             HHHHHHhh-ccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhh
Confidence            22222221 222333446799999999999999999999211 1199999999999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.9e-27  Score=200.49  Aligned_cols=145  Identities=34%  Similarity=0.557  Sum_probs=124.6

Q ss_pred             CccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      |+.+|||||||+|+++- .-|.+||.|||++-.+.+-.                                          
T Consensus       136 qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~------------------------------------------  173 (864)
T KOG4717|consen  136 QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK------------------------------------------  173 (864)
T ss_pred             hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc------------------------------------------
Confidence            45799999999999775 56999999999874433221                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  .-..++|+..|-|||++.|..| -+++||||||++||.|++|+.||...++.
T Consensus       174 ----------------------------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS  225 (864)
T KOG4717|consen  174 ----------------------------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS  225 (864)
T ss_pred             ----------------------------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch
Confidence                                        1123589999999999999987 67899999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      +.+-.|++-.+..|.  .++.+|++||.+||..||++|.+    ++++..++|++.++-....
T Consensus       226 ETLTmImDCKYtvPs--hvS~eCrdLI~sMLvRdPkkRAs----lEeI~s~~Wlq~~D~~~sT  282 (864)
T KOG4717|consen  226 ETLTMIMDCKYTVPS--HVSKECRDLIQSMLVRDPKKRAS----LEEIVSTSWLQAGDRGLST  282 (864)
T ss_pred             hhhhhhhcccccCch--hhhHHHHHHHHHHHhcCchhhcc----HHHHhccccccCCCCCccc
Confidence            999999988777665  69999999999999999999999    9999999999999865433

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.94  E-value=2.1e-26  Score=193.43  Aligned_cols=141  Identities=23%  Similarity=0.471  Sum_probs=117.7

Q ss_pred             ccceeecCCCCcEEeCCC------CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD------GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~------~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      ++||||||||.||||+..      -.+||+|||+++......-..                                   
T Consensus       128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~-----------------------------------  172 (429)
T KOG0595|consen  128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAE-----------------------------------  172 (429)
T ss_pred             CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHH-----------------------------------
Confidence            689999999999999864      358999999998766432211                                   


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                         ..+|++-|||||+++...|+.|+|+||+|+++|++++|+.||...
T Consensus       173 -----------------------------------tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  173 -----------------------------------TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             -----------------------------------HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                                               248999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhccCCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          156 DHELTLANIVARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +..+.+..+.++....+. +...+..+.+|+...|+.++.+|.+    ..+-+.|+++..-.
T Consensus       218 t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~----~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  218 TPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS----FEDFFDHPFLAANP  275 (429)
T ss_pred             CHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc----hHHhhhhhhcccCc
Confidence            999888877665544433 3456778889999999999999999    77778888887654

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=2.5e-26  Score=193.59  Aligned_cols=148  Identities=31%  Similarity=0.438  Sum_probs=115.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       128 ~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  165 (292)
T cd06644         128 SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ------------------------------------------  165 (292)
T ss_pred             cCCeeecCCCcceEEEcCCCCEEEccCccceecccccc------------------------------------------
Confidence            36899999999999999999999999998743211100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......++..|+|||++.+     ..++.++|+|||||++|+|++|..||...
T Consensus       166 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  218 (292)
T cd06644         166 ---------------------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  218 (292)
T ss_pred             ---------------------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence                                       0001247789999999853     34688999999999999999999999877


Q ss_pred             ChHHHHHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          156 DHELTLANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       156 ~~~~~~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      .......++..... .......++.++.+||.+||+.+|++||+    +++++.||||..++|+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~~~~  281 (292)
T cd06644         219 NPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS----AAQLLEHPFVSSVTSNRPL  281 (292)
T ss_pred             cHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHhcCccccccccchhH
Confidence            66655555543322 12334467889999999999999999999    9999999999999987643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=2.6e-26  Score=195.47  Aligned_cols=142  Identities=23%  Similarity=0.342  Sum_probs=101.3

Q ss_pred             CccceeecCCCCcEEe----CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLV----RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      ++||+||||||+||++    +.++.+||+|||+++.........                                    
T Consensus       126 ~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~------------------------------------  169 (317)
T cd07867         126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL------------------------------------  169 (317)
T ss_pred             hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc------------------------------------
Confidence            3689999999999999    456789999999986543211000                                    


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                    .......+|..|+|||++.+. .++.++||||+||++|+|++|..||...
T Consensus       170 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         170 ------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ------------------------------cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence                                          000123578999999999875 4799999999999999999999999754


Q ss_pred             ChH---------HHHHHHHHhccCC------------------------------------CCCCCCChHHHHHHHHhcc
Q 025601          156 DHE---------LTLANIVARALEF------------------------------------PKEPAVPATAKDLISQLLA  190 (250)
Q Consensus       156 ~~~---------~~~~~i~~~~~~~------------------------------------p~~~~~~~~~~~ll~~~L~  190 (250)
                      ...         ..+.++....+..                                    ......+..+.+||.+||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~  299 (317)
T cd07867         220 QEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLT  299 (317)
T ss_pred             cccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhc
Confidence            321         1122221111000                                    0001234568899999999


Q ss_pred             cCccccCCCccChHHHhcCCCC
Q 025601          191 KDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .||++|||    ++++|+||||
T Consensus       300 ~dP~~R~t----~~e~l~hp~f  317 (317)
T cd07867         300 MDPTKRIT----SEQALQDPYF  317 (317)
T ss_pred             cCcccccC----HHHHhcCCCC
Confidence            99999999    9999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.6e-27  Score=208.39  Aligned_cols=141  Identities=29%  Similarity=0.496  Sum_probs=115.7

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ..|||||||.+|+|+. -.|.+||+|||-+++...                                             
T Consensus       694 n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg---------------------------------------------  728 (1226)
T KOG4279|consen  694 NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG---------------------------------------------  728 (1226)
T ss_pred             cceeeccccCCcEEEeeccceEEecccccchhhcc---------------------------------------------
Confidence            4699999999999997 589999999998765432                                             


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                              .+..+..|.||.+|||||++-.  ++|+.++|||||||+..||.||++||......
T Consensus       729 ------------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp  784 (1226)
T KOG4279|consen  729 ------------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP  784 (1226)
T ss_pred             ------------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence                                    1223446789999999999965  34999999999999999999999999866544


Q ss_pred             H-HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 L-TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~-~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      . ...++.--..+.+.+..++.++++||.+|+..||.+||+    |.+||..||++.-
T Consensus       785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~s----A~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPS----AKDLLQDPFLQHN  838 (1226)
T ss_pred             hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCcc----HHHhccCcccccC
Confidence            3 333333334456667788999999999999999999999    9999999999865

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.9e-26  Score=205.60  Aligned_cols=143  Identities=29%  Similarity=0.411  Sum_probs=105.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++........                                         
T Consensus       278 ~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~-----------------------------------------  316 (461)
T PHA03211        278 GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST-----------------------------------------  316 (461)
T ss_pred             HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc-----------------------------------------
Confidence            369999999999999999999999999998543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----  156 (250)
                                                .....+.||..|+|||++.+..++.++|||||||++|||++|..++....    
T Consensus       317 --------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~  370 (461)
T PHA03211        317 --------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDE  370 (461)
T ss_pred             --------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccc
Confidence                                      00012468999999999999889999999999999999999876543221    


Q ss_pred             ---hHHHHHHHHHhccC----CCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCc
Q 025601          157 ---HELTLANIVARALE----FPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~----~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                         ....+.+++.....    ++.                             ...++..+.+||.+||+.||++|||  
T Consensus       371 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs--  448 (461)
T PHA03211        371 RRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS--  448 (461)
T ss_pred             cCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC--
Confidence               12334444332110    000                             0134567899999999999999999  


Q ss_pred             cChHHHhcCCCCCC
Q 025601          201 KGASAIKHHPFFQG  214 (250)
Q Consensus       201 ~~a~~ll~hp~~~~  214 (250)
                        +.|+|.||||++
T Consensus       449 --a~elL~hp~f~~  460 (461)
T PHA03211        449 --AAELLRLPLFQS  460 (461)
T ss_pred             --HHHHhhCcccCC
Confidence              999999999975

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=3e-26  Score=189.94  Aligned_cols=148  Identities=41%  Similarity=0.732  Sum_probs=118.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|++|+||+|+||+++.++.++|+|||++........                                          
T Consensus       111 ~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~------------------------------------------  148 (262)
T cd05572         111 NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK------------------------------------------  148 (262)
T ss_pred             hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc------------------------------------------
Confidence            36899999999999999999999999998755432110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD--HE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~--~~  158 (250)
                                                  .....++..|++||++.+..++.++|+||+|+++|+|++|..||....  ..
T Consensus       149 ----------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  200 (262)
T cd05572         149 ----------------------------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM  200 (262)
T ss_pred             ----------------------------cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH
Confidence                                        001257788999999988888999999999999999999999998776  44


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcc
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~  218 (250)
                      .....+.........+...+.++.+||.+||..+|++|+++. ..++++++||||++.+|.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  261 (262)
T cd05572         201 EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE  261 (262)
T ss_pred             HHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence            455555533333334445689999999999999999999954 457999999999999985

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.93  E-value=2.8e-26  Score=191.01  Aligned_cols=138  Identities=26%  Similarity=0.425  Sum_probs=109.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~-------------------------------------------  166 (272)
T cd06637         130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------------------------------------------  166 (272)
T ss_pred             CCCccCCCCHHHEEECCCCCEEEccCCCceecccccc-------------------------------------------
Confidence            6899999999999999999999999998754321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......|+..|+|||++.+     ..++.++||||+||++|+|++|..||....
T Consensus       167 --------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~  220 (272)
T cd06637         167 --------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  220 (272)
T ss_pred             --------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence                                      0112357889999999863     347889999999999999999999998766


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .......+............++..+.+|+.+||..+|.+||+    +.+++.||||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~~  272 (272)
T cd06637         221 PMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT----TEQLMKHPFI  272 (272)
T ss_pred             HHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC----HHHHhhCCCC
Confidence            555554444333333334567899999999999999999999    9999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.8e-27  Score=222.42  Aligned_cols=146  Identities=32%  Similarity=0.550  Sum_probs=118.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||.||+++.+|.+|++|||.|.........-.                                       
T Consensus      1352 ~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~--------------------------------------- 1392 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP--------------------------------------- 1392 (1509)
T ss_pred             hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC---------------------------------------
Confidence            47999999999999999999999999998866554421100                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                .-.....||+.|||||++.+.   +...++||||||||+.||+||+.||...++
T Consensus      1393 --------------------------~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1393 --------------------------GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred             --------------------------HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence                                      001135799999999999864   478899999999999999999999998876


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +-++.-.+.-+-..+.+..++.+-.+||..||+.||++|++    +.+||+|-|-+.-
T Consensus      1447 e~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~----~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1447 EWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWT----ASQLLEHAFGKSC 1500 (1509)
T ss_pred             hhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhH----HHHHHHhhccccc
Confidence            65554444444344455569999999999999999999999    9999999998753

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.93  E-value=3.7e-26  Score=196.60  Aligned_cols=136  Identities=21%  Similarity=0.343  Sum_probs=105.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       192 ~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~----------------------------------------  231 (338)
T cd05102         192 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----------------------------------------  231 (338)
T ss_pred             HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchh----------------------------------------
Confidence            3689999999999999999999999999985432111000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.....
T Consensus       232 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~  284 (338)
T cd05102         232 ---------------------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE  284 (338)
T ss_pred             ---------------------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH
Confidence                                       0001135678999999998889999999999999999997 999998866555


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .+...+........+..++..+.+|+.+||+.||++||+    +.+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs----~~el~  328 (338)
T cd05102         285 EFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPT----FSALV  328 (338)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHH
Confidence            554544444444445678999999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=7.8e-27  Score=200.98  Aligned_cols=138  Identities=26%  Similarity=0.396  Sum_probs=124.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .+|+|||||+.|||++.++.++|+|||+++.+......                                          
T Consensus       125 ~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~------------------------------------------  162 (426)
T KOG0589|consen  125 NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL------------------------------------------  162 (426)
T ss_pred             hhhhcccchhhhhhccccCceeecchhhhhhcCCchhh------------------------------------------
Confidence            57999999999999999999999999999887765321                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 ..+.+||+.|++||.+.+.+|+.++|||||||++|||++-+.+|.+.+.....
T Consensus       163 ---------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li  215 (426)
T KOG0589|consen  163 ---------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELI  215 (426)
T ss_pred             ---------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHH
Confidence                                       11358999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .+|.... -.|.+..++.+++.+|..||..+|..||+    |.+||.+|.+.
T Consensus       216 ~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPs----a~~LL~~P~l~  262 (426)
T KOG0589|consen  216 LKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPS----ALELLRRPHLL  262 (426)
T ss_pred             HHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCC----HHHHhhChhhh
Confidence            9988776 44777789999999999999999999999    99999998876

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.93  E-value=6.1e-26  Score=192.16  Aligned_cols=143  Identities=28%  Similarity=0.475  Sum_probs=110.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       122 ~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  159 (301)
T cd07873         122 RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK------------------------------------------  159 (301)
T ss_pred             hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC------------------------------------------
Confidence            36899999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+
T Consensus       160 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         160 ---------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             ---------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       00012467899999998764 47899999999999999999999999877665


Q ss_pred             HHHHHHHhccC-------------------CCC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALE-------------------FPK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~-------------------~p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ....+......                   .+.         ...++..+.+||.+||+.||.+|||    ++++++|||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~eil~h~~  288 (301)
T cd07873         213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS----AEEAMKHPY  288 (301)
T ss_pred             HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC----HHHHhcCcc
Confidence            55444332110                   010         1246788999999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |+...
T Consensus       289 f~~~~  293 (301)
T cd07873         289 FHCLG  293 (301)
T ss_pred             ccccc
Confidence            98765

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=5.4e-26  Score=190.47  Aligned_cols=141  Identities=33%  Similarity=0.541  Sum_probs=109.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.......                                           
T Consensus       113 ~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-------------------------------------------  149 (279)
T cd06619         113 SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-------------------------------------------  149 (279)
T ss_pred             HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-------------------------------------------
Confidence            3699999999999999999999999999875432110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                                  .....+|..|+|||++.+..++.++|+|||||++|+|++|..||......  
T Consensus       150 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~  201 (279)
T cd06619         150 ----------------------------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG  201 (279)
T ss_pred             ----------------------------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc
Confidence                                        00235888999999999888999999999999999999999999653211  


Q ss_pred             -----HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 -----LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 -----~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                           .....+............++.++.+|+.+||+.+|++||+    +++++.||||...+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~eil~~~~~~~~~  260 (279)
T cd06619         202 SLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA----PENLMDHPFIVQYN  260 (279)
T ss_pred             ccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCC----HHHHhcCccccccc
Confidence                 1122222222122122357889999999999999999999    99999999998765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PHA02988 hypothetical protein; Provisional

Probab=99.93  E-value=4.3e-26  Score=191.75  Aligned_cols=130  Identities=17%  Similarity=0.257  Sum_probs=107.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++||||||+||+++.++.+||+|||+++......                                            
T Consensus       142 ~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  177 (283)
T PHA02988        142 TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--------------------------------------------  177 (283)
T ss_pred             CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc--------------------------------------------
Confidence            478999999999999999999999999875422110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  ....++..|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+
T Consensus       178 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~  229 (283)
T PHA02988        178 ----------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE  229 (283)
T ss_pred             ----------------------------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence                                        01257889999999976  568999999999999999999999999888777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....++......+.+..++..+.+||.+||+.||++|||    +.+++
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ell  273 (283)
T PHA02988        230 IYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPN----IKEIL  273 (283)
T ss_pred             HHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcC----HHHHH
Confidence            777776665555555578999999999999999999999    55554

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=5.3e-26  Score=187.99  Aligned_cols=154  Identities=44%  Similarity=0.832  Sum_probs=120.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++...........                                        
T Consensus       112 ~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----------------------------------------  151 (265)
T cd05579         112 NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL----------------------------------------  151 (265)
T ss_pred             cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc----------------------------------------
Confidence            6899999999999999999999999998754322110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                           ...........++..|++||++.+..++.++|+||||+++++|++|..||.........
T Consensus       152 ---------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~  210 (265)
T cd05579         152 ---------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF  210 (265)
T ss_pred             ---------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                 00000111235778899999998888899999999999999999999999988877777


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ..+.......+....++..+.+|+.+||+.+|++|||+.. +.+++.||||..++|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~-~~~~l~~~~~~~~~~  265 (265)
T cd05579         211 QNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKS-IEEIKNHPFFKGIDW  265 (265)
T ss_pred             HHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCcc-HHHHhcCccccCCCC
Confidence            7776655555554445999999999999999999999322 399999999999998

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.93  E-value=1e-26  Score=188.63  Aligned_cols=142  Identities=32%  Similarity=0.546  Sum_probs=119.4

Q ss_pred             CccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +++|.||||||+|+|..   .|..+||+|||+|+........                                      
T Consensus       179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L--------------------------------------  220 (400)
T KOG0604|consen  179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDL--------------------------------------  220 (400)
T ss_pred             hcchhhccCChhheeeecCCCCcceEecccccccccCCCccc--------------------------------------
Confidence            36899999999999996   3567999999999775432111                                      


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-  156 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-  156 (250)
                                                      .+=+.|+.|.|||++...+|+...|+||+|+++|-|++|.+||.... 
T Consensus       221 --------------------------------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg  268 (400)
T KOG0604|consen  221 --------------------------------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  268 (400)
T ss_pred             --------------------------------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC
Confidence                                            01257899999999998899999999999999999999999997553 


Q ss_pred             ---hHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          157 ---HELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                         ...+-.+|..+.+.||.+  ..+|+..+++|+++|..+|.+|.|    ++++++|||+.+..
T Consensus       269 ~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT----I~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  269 LAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT----IEEVMDHPWINQYE  329 (400)
T ss_pred             ccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee----HHHhhcCchhcccc
Confidence               345567788888888887  468999999999999999999999    99999999998754

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=3.8e-26  Score=191.38  Aligned_cols=138  Identities=27%  Similarity=0.410  Sum_probs=109.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       140 ~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  176 (282)
T cd06636         140 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------------------------------------------  176 (282)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc-------------------------------------------
Confidence            6899999999999999999999999998754321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......++..|+|||++.     +..++.++|+|||||++|+|++|..||....
T Consensus       177 --------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~  230 (282)
T cd06636         177 --------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH  230 (282)
T ss_pred             --------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence                                      001235788999999986     3457889999999999999999999998766


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .......+............++..+.+||.+||+.||.+||+    +.+++.||||
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~ell~~~~~  282 (282)
T cd06636         231 PMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS----TEQLLKHPFI  282 (282)
T ss_pred             HHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC----HHHHhcCCCC
Confidence            555544444333332333468899999999999999999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1e-26  Score=203.08  Aligned_cols=137  Identities=25%  Similarity=0.354  Sum_probs=122.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +++.||||||..|||+...|.+||+|||.+-.+.                                              
T Consensus       144 S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~----------------------------------------------  177 (948)
T KOG0577|consen  144 SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA----------------------------------------------  177 (948)
T ss_pred             HhhHHhhhccccceEecCCCeeeeccccchhhcC----------------------------------------------
Confidence            4789999999999999999999999999763322                                              


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                 ..++|+|||.|||||+|..   +.|+-++||||||+++.||..+++|+..++-
T Consensus       178 ---------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA  230 (948)
T KOG0577|consen  178 ---------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  230 (948)
T ss_pred             ---------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH
Confidence                                       2236899999999999975   3489999999999999999999999999998


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ...+..|..+..+.......+..+.+|+.+||++-|++|||    .+++|.|+|+.-
T Consensus       231 MSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRpt----se~ll~H~fv~R  283 (948)
T KOG0577|consen  231 MSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPT----SEELLKHRFVLR  283 (948)
T ss_pred             HHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCc----HHHHhhcchhcc
Confidence            88999999888777777778999999999999999999999    999999999864

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.93  E-value=2.1e-25  Score=207.66  Aligned_cols=119  Identities=39%  Similarity=0.863  Sum_probs=105.4

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-CCCChHHHHHHHHhcc
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-PAVPATAKDLISQLLA  190 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-~~~~~~~~~ll~~~L~  190 (250)
                      ++||+.|+|||++.+..++.++|||||||++|||++|..||.+......+..++.....++.. ..++..+.+++.+||.
T Consensus       540 ~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~  619 (669)
T cd05610         540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLT  619 (669)
T ss_pred             eeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcc
Confidence            478999999999999889999999999999999999999999988888888777665544332 3578889999999999


Q ss_pred             cCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCc
Q 025601          191 KDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNR  234 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~  234 (250)
                      .||++||+    +.+++.||||+.++|..+...++|+.|.+.+.
T Consensus       620 ~dP~~R~t----a~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~  659 (669)
T cd05610         620 MDPTKRAG----LKELKQHPLFHGVDWENLQNQTMPFIPQPDDE  659 (669)
T ss_pred             cChhHCcC----HHHHHhCHhhcCCCHHHhcccCCCCCCCCCCc
Confidence            99999999    99999999999999999999999999977543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.93  E-value=2.9e-27  Score=205.73  Aligned_cols=135  Identities=30%  Similarity=0.540  Sum_probs=118.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++.|||||||.-||||..+..+||+|||.++.+...                                            
T Consensus       230 ~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--------------------------------------------  265 (904)
T KOG4721|consen  230 LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--------------------------------------------  265 (904)
T ss_pred             HhhHhhhccCCCceEeeccceEEeccccchHhhhhh--------------------------------------------
Confidence            367999999999999999999999999987554432                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ...++|.||..|||||+|...+.+.++||||||+||||||||..|+.+.+....
T Consensus       266 --------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI  319 (904)
T KOG4721|consen  266 --------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI  319 (904)
T ss_pred             --------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence                                      134578999999999999999999999999999999999999999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +-.+-......|.+..+|+.++=||+.||+-.|..||+    .+++|.|
T Consensus       320 IwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPS----Frqil~H  364 (904)
T KOG4721|consen  320 IWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPS----FRQILLH  364 (904)
T ss_pred             EEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCcc----HHHHHHH
Confidence            65566666778888899999999999999999999999    7777776

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.93  E-value=1e-25  Score=188.95  Aligned_cols=142  Identities=30%  Similarity=0.433  Sum_probs=112.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++........                                          
T Consensus       121 ~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  158 (282)
T cd06643         121 ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ------------------------------------------  158 (282)
T ss_pred             HCCeeecCCCcccEEEccCCCEEEcccccccccccccc------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 ......++..|+|||++.     +..++.++||||+||++|+|++|..||...
T Consensus       159 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~  211 (282)
T cd06643         159 ---------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL  211 (282)
T ss_pred             ---------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence                                       001235788999999984     344788999999999999999999999887


Q ss_pred             ChHHHHHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          156 DHELTLANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       156 ~~~~~~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +......++..... ..+.+..++.++.+||.+||+.+|.+||+    +.+++.||||...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~  268 (282)
T cd06643         212 NPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT----TTQLLQHPFVTVN  268 (282)
T ss_pred             CHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCCCEecc
Confidence            76666666554332 23334568899999999999999999999    9999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=9.6e-26  Score=189.78  Aligned_cols=149  Identities=21%  Similarity=0.350  Sum_probs=114.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.........                                        
T Consensus       137 ~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~----------------------------------------  176 (288)
T cd05061         137 AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR----------------------------------------  176 (288)
T ss_pred             hCCCcCCCCChheEEEcCCCcEEECcCCcccccccccccc----------------------------------------
Confidence            3689999999999999999999999999875432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+....+
T Consensus       177 ---------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~  229 (288)
T cd05061         177 ---------------------------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ  229 (288)
T ss_pred             ---------------------------ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                       0001134567999999988889999999999999999998 788998877766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc--CCCCCCCCc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH--HPFFQGVNW  217 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~--hp~~~~~~~  217 (250)
                      ....+.... ....+..++..+.+++.+||+.+|++||++.+.++.+..  ||||++++|
T Consensus       230 ~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         230 VLKFVMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             HHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence            655554432 233345678999999999999999999995554444444  999999998

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.1e-25  Score=194.11  Aligned_cols=141  Identities=33%  Similarity=0.533  Sum_probs=111.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||+++.....                                             
T Consensus       136 ~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---------------------------------------------  170 (342)
T cd07879         136 AGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------------  170 (342)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC---------------------------------------------
Confidence            68999999999999999999999999987432110                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....
T Consensus       171 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~  223 (342)
T cd07879         171 ---------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ  223 (342)
T ss_pred             ---------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       001256788999999876 4578999999999999999999999998775555


Q ss_pred             HHHHHHhccC-----------------------CCC------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALE-----------------------FPK------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~-----------------------~p~------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..++.....                       .+.      ....+..+.+||.+||+.||++||+    +++++.|||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~----~~e~l~h~~  299 (342)
T cd07879         224 LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT----ATEALEHPY  299 (342)
T ss_pred             HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcc
Confidence            5544432110                       010      0245678999999999999999999    999999999


Q ss_pred             CCCCCcc
Q 025601          212 FQGVNWA  218 (250)
Q Consensus       212 ~~~~~~~  218 (250)
                      |+.+.+.
T Consensus       300 f~~~~~~  306 (342)
T cd07879         300 FDSFRDA  306 (342)
T ss_pred             hhhcccc
Confidence            9998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=1.4e-25  Score=186.27  Aligned_cols=143  Identities=27%  Similarity=0.462  Sum_probs=112.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||+|+||+++.++.++|+|||+++...........                                       
T Consensus       125 ~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~---------------------------------------  165 (267)
T cd06628         125 RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKT---------------------------------------  165 (267)
T ss_pred             cCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCc---------------------------------------
Confidence            68999999999999999999999999988654321100000                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                              ......+.++..|+|||++.+..++.++|+||+||++|+|++|..||.+.......
T Consensus       166 ------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  221 (267)
T cd06628         166 ------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI  221 (267)
T ss_pred             ------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH
Confidence                                    00001235778999999998888899999999999999999999999887665555


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .++.... ....+..++..+.++|.+||+.||++||+    +.+++.||||
T Consensus       222 ~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~  267 (267)
T cd06628         222 FKIGENA-SPEIPSNISSEAIDFLEKTFEIDHNKRPT----AAELLKHPFL  267 (267)
T ss_pred             HHHhccC-CCcCCcccCHHHHHHHHHHccCCchhCcC----HHHHhhCCCC
Confidence            5544422 22334568999999999999999999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.93  E-value=4.8e-26  Score=191.36  Aligned_cols=143  Identities=29%  Similarity=0.465  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++........                                           
T Consensus       127 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  163 (288)
T cd06616         127 LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA-------------------------------------------  163 (288)
T ss_pred             CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc-------------------------------------------
Confidence            5899999999999999999999999998743221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 .....++..|+|||++.+.   .++.++||||+||++|+|++|..||......
T Consensus       164 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  216 (288)
T cd06616         164 ---------------------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV  216 (288)
T ss_pred             ---------------------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH
Confidence                                       0012477889999999876   5899999999999999999999999765421


Q ss_pred             -HHHHHHHHhccC-CC--CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          159 -LTLANIVARALE-FP--KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 -~~~~~i~~~~~~-~p--~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                       +.+.++...... .+  ....++.++.+||.+||+.+|++||+    +++++.||||+...|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~i~~~~~~~~~~~~  276 (288)
T cd06616         217 FDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK----YKELLEHPFIKDYEER  276 (288)
T ss_pred             HHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC----HHHHhcChhhhchhhc
Confidence             222222222111 11  11247889999999999999999999    9999999999986553

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.93  E-value=1.9e-25  Score=188.93  Aligned_cols=143  Identities=29%  Similarity=0.509  Sum_probs=114.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       133 ~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  170 (296)
T cd06655         133 ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS------------------------------------------  170 (296)
T ss_pred             HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc------------------------------------------
Confidence            36899999999999999999999999998744321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||.+.+..++.++|+|||||++|+|++|..||.+......
T Consensus       171 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~  223 (296)
T cd06655         171 ---------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (296)
T ss_pred             ---------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00012578899999999888899999999999999999999999988776555


Q ss_pred             HHHHHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+.... .....+..++..+.+||.+||..||++||+    +.+++.||||+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~il~~~~~~~~~  276 (296)
T cd06655         224 LYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKLAK  276 (296)
T ss_pred             HHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC----HHHHhhChHhhhcc
Confidence            54443322 122344568899999999999999999999    99999999998755

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.5e-25  Score=187.06  Aligned_cols=142  Identities=30%  Similarity=0.464  Sum_probs=114.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++........                                           
T Consensus       117 ~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-------------------------------------------  153 (274)
T cd06609         117 EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-------------------------------------------  153 (274)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEcccccceeeccccc-------------------------------------------
Confidence            6899999999999999999999999998855432210                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       154 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~  207 (274)
T cd06609         154 --------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL  207 (274)
T ss_pred             --------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH
Confidence                                      000135778899999999888999999999999999999999999876655555


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+............++..+.+++.+||..+|++||+    +++++.||||....
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt----~~~il~~~~~~~~~  258 (274)
T cd06609         208 FLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPS----AKELLKHKFIKKAK  258 (274)
T ss_pred             HHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcC----HHHHhhChhhcCCC
Confidence            4444443332222237899999999999999999999    99999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.93  E-value=2.4e-25  Score=189.12  Aligned_cols=143  Identities=27%  Similarity=0.343  Sum_probs=111.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.+||+|||++.........                                         
T Consensus       126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~-----------------------------------------  164 (309)
T cd07845         126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP-----------------------------------------  164 (309)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC-----------------------------------------
Confidence            368999999999999999999999999987554321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+
T Consensus       165 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~  216 (309)
T cd07845         165 ----------------------------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE  216 (309)
T ss_pred             ----------------------------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                        0011356789999998764 47999999999999999999999999888777


Q ss_pred             HHHHHHHhccC-------------------CCC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALE-------------------FPK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~-------------------~p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .+..+......                   .+.         ....+..+.+||.+||+.||++|||    +++++.|||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t----~~~il~h~~  292 (309)
T cd07845         217 QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT----AEEALESSY  292 (309)
T ss_pred             HHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC----HHHHhcChh
Confidence            77666553211                   000         0125788899999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |++..
T Consensus       293 f~~~~  297 (309)
T cd07845         293 FKEKP  297 (309)
T ss_pred             hccCC
Confidence            98744

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.93  E-value=1.2e-25  Score=192.79  Aligned_cols=150  Identities=23%  Similarity=0.418  Sum_probs=107.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+++.||+..............                                      
T Consensus       119 ~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------------------------  160 (327)
T cd08227         119 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV--------------------------------------  160 (327)
T ss_pred             HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc--------------------------------------
Confidence            368999999999999999999999999865332211000000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                              .........++..|+|||++.+  ..++.++|||||||++|+|++|..||......
T Consensus       161 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  216 (327)
T cd08227         161 ------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT  216 (327)
T ss_pred             ------------------------cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence                                    0000001246678999999976  45899999999999999999999999876654


Q ss_pred             HHHHHHHHhccC--------------------------------------------CCCCCCCChHHHHHHHHhcccCcc
Q 025601          159 LTLANIVARALE--------------------------------------------FPKEPAVPATAKDLISQLLAKDPE  194 (250)
Q Consensus       159 ~~~~~i~~~~~~--------------------------------------------~p~~~~~~~~~~~ll~~~L~~dP~  194 (250)
                      ...........+                                            .+....++..+.+||.+||+.||+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  296 (327)
T cd08227         217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD  296 (327)
T ss_pred             HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence            443333221111                                            001123467899999999999999


Q ss_pred             ccCCCccChHHHhcCCCCCCCC
Q 025601          195 RRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       195 ~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +|||    ++++++||||+.+.
T Consensus       297 ~Rpt----~~ell~~p~f~~~~  314 (327)
T cd08227         297 ARPS----ASTLLNHSFFKQIK  314 (327)
T ss_pred             hcCC----HHHHhcChhhhhcc
Confidence            9999    99999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.93  E-value=1.8e-25  Score=187.35  Aligned_cols=139  Identities=28%  Similarity=0.470  Sum_probs=103.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.......                                          
T Consensus       117 ~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  154 (284)
T cd07839         117 SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR------------------------------------------  154 (284)
T ss_pred             HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC------------------------------------------
Confidence            36899999999999999999999999998754221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCC-CCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPF-RGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf-~~~~~~  158 (250)
                                                 ......++..|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..
T Consensus       155 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         155 ---------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             ---------------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence                                       000124678899999987754 689999999999999999998885 444444


Q ss_pred             HHHHHHHHhccC-----------------C----------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALE-----------------F----------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~-----------------~----------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +.+..+......                 .          .....++.++.+||.+||+.||.+|||    +++++.|||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~il~h~~  283 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS----AEEALQHPY  283 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC----HHHHhcCCC
Confidence            444333221110                 0          011246788999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       284 f  284 (284)
T cd07839         284 F  284 (284)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.93  E-value=2.5e-25  Score=183.44  Aligned_cols=138  Identities=24%  Similarity=0.403  Sum_probs=112.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||+++........                                         
T Consensus       119 ~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~-----------------------------------------  157 (256)
T cd08529         119 SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF-----------------------------------------  157 (256)
T ss_pred             HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch-----------------------------------------
Confidence            368999999999999999999999999987544321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....++..|+|||++.+..++.++|+|||||++++|++|..||........
T Consensus       158 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  209 (256)
T cd08529         158 ----------------------------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL  209 (256)
T ss_pred             ----------------------------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                        0012467889999999988889999999999999999999999988876666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+...... +....++..+.+++.+||+.+|++||+    +.+++.|||+
T Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~  256 (256)
T cd08529         210 ILKIIRGVFP-PVSQMYSQQLAQLIDQCLTKDYRQRPD----TFQLLRNPSL  256 (256)
T ss_pred             HHHHHcCCCC-CCccccCHHHHHHHHHHccCCcccCcC----HHHHhhCCCC
Confidence            6555544332 233368899999999999999999999    9999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.93  E-value=2.1e-25  Score=185.50  Aligned_cols=141  Identities=27%  Similarity=0.435  Sum_probs=108.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++..........                                         
T Consensus       125 ~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------------------  163 (266)
T cd06651         125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSG-----------------------------------------  163 (266)
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccC-----------------------------------------
Confidence            689999999999999999999999999875542211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .......++..|+|||++.+..++.++|+||+||++|+|++|+.||.........
T Consensus       164 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~  218 (266)
T cd06651         164 -------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI  218 (266)
T ss_pred             -------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH
Confidence                                     0001134778999999999888899999999999999999999999877655555


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .++.........+..++..+.+|+ +||..+|++||+    +++++.||||+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~----~~eil~hp~~~  265 (266)
T cd06651         219 FKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPS----AEELLRHPFAQ  265 (266)
T ss_pred             HHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcC----HHHHhcCcccc
Confidence            444332222222345678888998 577789999999    99999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.93  E-value=2.7e-25  Score=184.53  Aligned_cols=144  Identities=26%  Similarity=0.376  Sum_probs=111.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++............                                       
T Consensus       121 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~---------------------------------------  161 (265)
T cd06631         121 NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH---------------------------------------  161 (265)
T ss_pred             CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccc---------------------------------------
Confidence            58999999999999999999999999987543211100000                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                              ........++..|+|||++.+..++.++|+|||||++++|++|..||...+.....
T Consensus       162 ------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~  217 (265)
T cd06631         162 ------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM  217 (265)
T ss_pred             ------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH
Confidence                                    00001235788999999999888899999999999999999999999877655554


Q ss_pred             HHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+...... ...+..++..+.+||.+||+.+|++||+    +.+++.||||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~  265 (265)
T cd06631         218 FYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS----ALQLLRHDFL  265 (265)
T ss_pred             HHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence            444433222 2234568999999999999999999999    9999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.93  E-value=2.7e-25  Score=186.26  Aligned_cols=139  Identities=29%  Similarity=0.416  Sum_probs=105.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  156 (285)
T cd07861         119 SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR------------------------------------------  156 (285)
T ss_pred             hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc------------------------------------------
Confidence            36899999999999999999999999998744321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+. .++.++|||||||++++|++|+.||.+.....
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~  209 (285)
T cd07861         157 ---------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID  209 (285)
T ss_pred             ---------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                                       00011467889999998764 47899999999999999999999998776544


Q ss_pred             HHHHHHHhccCC---------------------------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEF---------------------------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~---------------------------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ....+.......                           .....++.++.+||.+||..||++|||    +.+++.||||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~ll~~~~~  285 (285)
T cd07861         210 QLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS----AKKALNHPYF  285 (285)
T ss_pred             HHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC----HHHHhcCCCC
Confidence            433332211100                           001347889999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.92  E-value=3.6e-25  Score=190.42  Aligned_cols=146  Identities=27%  Similarity=0.455  Sum_probs=108.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++...........                                       
T Consensus       124 ~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------  164 (336)
T cd07849         124 SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTG---------------------------------------  164 (336)
T ss_pred             hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccC---------------------------------------
Confidence            36899999999999999999999999998754322110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+|..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.....
T Consensus       165 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~  217 (336)
T cd07849         165 ---------------------------FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH  217 (336)
T ss_pred             ---------------------------CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       0012357889999998765 458999999999999999999999998765444


Q ss_pred             HHHHHHHhccC--------------------CC---------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALE--------------------FP---------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~--------------------~p---------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+......                    .+         ....++.++.+||.+||+.+|++|||    +.+++.||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~e~l~hp  293 (336)
T cd07849         218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT----VEEALAHP  293 (336)
T ss_pred             HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC----HHHHhcCc
Confidence            33332221110                    00         01245788999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||+...
T Consensus       294 ~~~~~~  299 (336)
T cd07849         294 YLEQYH  299 (336)
T ss_pred             cccccC
Confidence            999764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.92  E-value=2.8e-25  Score=185.19  Aligned_cols=138  Identities=29%  Similarity=0.545  Sum_probs=107.5

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +.||+||||||+||+++.++ .++|+|||++.......                                          
T Consensus       127 ~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~------------------------------------------  164 (267)
T PHA03390        127 KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS------------------------------------------  164 (267)
T ss_pred             hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc------------------------------------------
Confidence            36899999999999999888 99999999874432110                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                     ...++..|+|||++.+..++.++|+||+||++++|++|..||.......
T Consensus       165 -------------------------------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~  213 (267)
T PHA03390        165 -------------------------------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE  213 (267)
T ss_pred             -------------------------------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch
Confidence                                           1246788999999998889999999999999999999999998654332


Q ss_pred             H-HHHHHHh-ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          160 T-LANIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       160 ~-~~~i~~~-~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      . ...+... ....+....++..+.+||.+||+.+|.+|++.   ++++|+||||++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~---~~~~l~h~~~~~  267 (267)
T PHA03390        214 LDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTN---YNEIIKHPFLKI  267 (267)
T ss_pred             hhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCch---HHHHhcCCcccC
Confidence            1 1111111 22223344689999999999999999999961   599999999974

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.92  E-value=3.4e-25  Score=185.30  Aligned_cols=136  Identities=31%  Similarity=0.502  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++. +.+||+|||++........                                           
T Consensus       119 ~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~-------------------------------------------  154 (282)
T cd07831         119 NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP-------------------------------------------  154 (282)
T ss_pred             CCceecccCHHHEEEcC-CCeEEEecccccccccCCC-------------------------------------------
Confidence            68999999999999999 9999999998754321110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+. .++.++||||+||++|+|++|..||.+.+..+.
T Consensus       155 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         155 ---------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             ---------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence                                       0012467889999987654 468899999999999999999999988776555


Q ss_pred             HHHHHHhccCC------------------CC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEF------------------PK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~------------------p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+.......                  +.         ...++..+.+||.+||+++|++||+    +++++.||||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~~l~~~~~  282 (282)
T cd07831         208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT----AKQALRHPYF  282 (282)
T ss_pred             HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC----HHHHhhCCCC
Confidence            54443321111                  00         1246789999999999999999999    9999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=2.4e-25  Score=187.96  Aligned_cols=143  Identities=27%  Similarity=0.531  Sum_probs=112.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++........                                          
T Consensus       136 ~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------------------------------------------  173 (292)
T cd06658         136 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------------------------------------------  173 (292)
T ss_pred             HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc------------------------------------------
Confidence            36899999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||++.+..++.++|+||+|+++|+|++|..||.+......
T Consensus       174 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  226 (292)
T cd06658         174 ---------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA  226 (292)
T ss_pred             ---------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00012578899999999888889999999999999999999999988776555


Q ss_pred             HHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +..+..... ..+....++..+.+|+.+||..||++|||    +++++.||||+...
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~~~~~  279 (292)
T cd06658         227 MRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT----AQELLQHPFLKLAG  279 (292)
T ss_pred             HHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhhccC
Confidence            544433221 12223357889999999999999999999    99999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.92  E-value=4e-25  Score=185.86  Aligned_cols=143  Identities=28%  Similarity=0.548  Sum_probs=113.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||+|+||+++.++.++|+|||++........                                          
T Consensus       133 ~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------  170 (285)
T cd06648         133 AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP------------------------------------------  170 (285)
T ss_pred             hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc------------------------------------------
Confidence            46999999999999999999999999997643211000                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||++.+..++.++||||+||++++|++|..||.+......
T Consensus       171 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~  223 (285)
T cd06648         171 ---------------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA  223 (285)
T ss_pred             ---------------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH
Confidence                                       00113578899999999888889999999999999999999999987766555


Q ss_pred             HHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+...... ......++..+.+||.+||+.+|++||+    +++++.||||+...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~~  276 (285)
T cd06648         224 MKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT----AAELLNHPFLAKAG  276 (285)
T ss_pred             HHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC----HHHHccCcccccCC
Confidence            5555443221 1122347889999999999999999999    99999999998854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=3.7e-25  Score=186.31  Aligned_cols=140  Identities=29%  Similarity=0.400  Sum_probs=109.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       146 ~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  184 (291)
T cd06639         146 NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-----------------------------------------  184 (291)
T ss_pred             hCCeeccCCCHHHEEEcCCCCEEEeecccchhccccccc-----------------------------------------
Confidence            368999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-----GHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                  .....++..|+|||++...     .++.++||||+||++|+|++|+.||...
T Consensus       185 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~  236 (291)
T cd06639         185 ----------------------------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM  236 (291)
T ss_pred             ----------------------------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence                                        0012467889999998643     2688999999999999999999999887


Q ss_pred             ChHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          156 DHELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .....+.++...... ......++..+.+||.+||+.+|++||+    +.++++||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~~~~~~  291 (291)
T cd06639         237 HPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS----VTHLLEHPFIK  291 (291)
T ss_pred             cHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC----HHHHhcCcccC
Confidence            766666555443221 2223356788999999999999999999    99999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=3.7e-25  Score=186.03  Aligned_cols=150  Identities=45%  Similarity=0.845  Sum_probs=114.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++||||||+||+++.++.++|+|||++.........                                          
T Consensus       124 ~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------  161 (288)
T cd05583         124 LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE------------------------------------------  161 (288)
T ss_pred             CCeeccCCCHHHeEECCCCCEEEEECcccccccccccc------------------------------------------
Confidence            68999999999999999999999999987443221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCh--
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDH--  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~--  157 (250)
                                                ......++..|+|||++.+..  .+.++|+||||+++++|++|..||.....  
T Consensus       162 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  215 (288)
T cd05583         162 --------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN  215 (288)
T ss_pred             --------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc
Confidence                                      001134778999999987654  68899999999999999999999964321  


Q ss_pred             --HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc
Q 025601          158 --ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       158 --~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~  222 (250)
                        .+....+....  .+.+..++..+.++|.+||+.+|++|||+.+ +.++|+||||+.++|+.+..
T Consensus       216 ~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~-~~~~l~~~~~~~~~~~~~~~  279 (288)
T cd05583         216 SQSEISRRILKSK--PPFPKTMSAEARDFIQKLLEKDPKKRLGANG-ADEIKNHPFFQGIDWDDLAA  279 (288)
T ss_pred             hHHHHHHHHHccC--CCCCcccCHHHHHHHHHHhcCCHhhccCcch-HHHHhcCcccccCCHHHHhh
Confidence              12222222222  2344568899999999999999999999544 78899999999999987644

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.92  E-value=3.3e-26  Score=182.93  Aligned_cols=140  Identities=29%  Similarity=0.431  Sum_probs=110.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +.||||||||+|||++..|.+||||||++-....+-...                                         
T Consensus       187 lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT-----------------------------------------  225 (361)
T KOG1006|consen  187 LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT-----------------------------------------  225 (361)
T ss_pred             hhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh-----------------------------------------
Confidence            579999999999999999999999999874433221000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVD-HE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~-~~  158 (250)
                                                   --.|-..|||||.+-.  .+|+.++||||||++++|+.||..|+.+-+ .-
T Consensus       226 -----------------------------~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf  276 (361)
T KOG1006|consen  226 -----------------------------VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF  276 (361)
T ss_pred             -----------------------------hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH
Confidence                                         0146789999999864  459999999999999999999999998744 33


Q ss_pred             HHHHHHHHhccCCCCC----CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +++.+++.+..+....    ..++..+..||..||.+|-.+||.    ..+|+.+||++-.
T Consensus       277 eql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk----y~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  277 EQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK----YDDLKKFPFYRMY  333 (361)
T ss_pred             HHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc----hhhhhcCchhhhh
Confidence            4566666554432221    347889999999999999999999    9999999999854

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.92  E-value=2.1e-25  Score=181.85  Aligned_cols=143  Identities=29%  Similarity=0.449  Sum_probs=109.8

Q ss_pred             ceeecCCCCcEEeCCC----CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            4 IVYRDLKPENVLVRSD----GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         4 iiHrDIKp~Nill~~~----~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      |+||||||.|||+..+    |.+||+|||+++........-.                                      
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~--------------------------------------  194 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLA--------------------------------------  194 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccc--------------------------------------
Confidence            7999999999999877    8999999999876544321100                                      


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCC--
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVD--  156 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~--  156 (250)
                                                  .....+-|..|+|||.+.|+. |+.+.|||++||++.||++-++.|.+..  
T Consensus       195 ----------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k  246 (438)
T KOG0666|consen  195 ----------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEK  246 (438)
T ss_pred             ----------------------------cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhh
Confidence                                        001236789999999999987 8999999999999999999999997753  


Q ss_pred             -------hHHHHHHHHHhccCCCCC------------------------------------CCCChHHHHHHHHhcccCc
Q 025601          157 -------HELTLANIVARALEFPKE------------------------------------PAVPATAKDLISQLLAKDP  193 (250)
Q Consensus       157 -------~~~~~~~i~~~~~~~p~~------------------------------------~~~~~~~~~ll~~~L~~dP  193 (250)
                             ..+++.+|.+-.+. |..                                    ..-++...+|+.+||++||
T Consensus       247 ~~~~~Pfq~dQl~rIf~vLG~-Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP  325 (438)
T KOG0666|consen  247 IKTKNPFQHDQLDRIFEVLGT-PTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDP  325 (438)
T ss_pred             cccCCCchHHHHHHHHHHcCC-CccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCc
Confidence                   22445555543332 221                                    1123448899999999999


Q ss_pred             cccCCCccChHHHhcCCCCCCCCc
Q 025601          194 ERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       194 ~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      .+|.|    ++++++|+||...+.
T Consensus       326 ~kRIt----a~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  326 IKRIT----AEQALEHPYFTEDPL  345 (438)
T ss_pred             hhhcc----HHHHhcccccccCCC
Confidence            99999    999999999998653

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=4.8e-25  Score=207.55  Aligned_cols=101  Identities=27%  Similarity=0.379  Sum_probs=83.8

Q ss_pred             cccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhc
Q 025601          112 FVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLL  189 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L  189 (250)
                      ..||+.|+|||++.+.  .++.++|||||||++|+|++|..||........+...+......+ ...++.++.+||..||
T Consensus       201 ~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L  279 (1021)
T PTZ00266        201 CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLL  279 (1021)
T ss_pred             cCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHh
Confidence            3689999999998753  478999999999999999999999987766655555555443333 2357899999999999


Q ss_pred             ccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          190 AKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       190 ~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ..+|.+||+    +.++|.|+||+.+..
T Consensus       280 ~~dPeeRPS----a~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        280 NLSAKERPS----ALQCLGYQIIKNVGP  303 (1021)
T ss_pred             cCChhHCcC----HHHHhccHHHhhcCC
Confidence            999999999    999999999997754

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=3.4e-25  Score=187.35  Aligned_cols=143  Identities=29%  Similarity=0.494  Sum_probs=112.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++........                                          
T Consensus       134 ~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  171 (296)
T cd06654         134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------  171 (296)
T ss_pred             HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc------------------------------------------
Confidence            36899999999999999999999999998744221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+++.|+|||.+.+..++.++|||||||++|+|++|..||........
T Consensus       172 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~  224 (296)
T cd06654         172 ---------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (296)
T ss_pred             ---------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh
Confidence                                       00012478899999999888889999999999999999999999987765544


Q ss_pred             HHHHHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+.... ...+....++..+.+|+.+||..+|++||+    +++++.||||...+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~  277 (296)
T cd06654         225 LYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKIAK  277 (296)
T ss_pred             HHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC----HHHHhhChhhhccC
Confidence            44333222 122234567889999999999999999999    99999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.92  E-value=7.3e-25  Score=189.04  Aligned_cols=164  Identities=25%  Similarity=0.361  Sum_probs=114.6

Q ss_pred             CccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||+||+++. ++.++|+|||++...........                                      
T Consensus       132 ~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~--------------------------------------  173 (342)
T cd07854         132 SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKG--------------------------------------  173 (342)
T ss_pred             hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccc--------------------------------------
Confidence            369999999999999985 56789999998754321110000                                      


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus       174 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~  225 (342)
T cd07854         174 ----------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL  225 (342)
T ss_pred             ----------------------------ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                        0001146788999998765 44788999999999999999999999877655


Q ss_pred             HHHHHHHHhcc----------------------CCC------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          159 LTLANIVARAL----------------------EFP------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       159 ~~~~~i~~~~~----------------------~~p------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      .....+.....                      ..+      ....++.++.+||.+||+.||++|||    +++++.||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ell~h~  301 (342)
T cd07854         226 EQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT----AEEALMHP  301 (342)
T ss_pred             HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC----HHHHhCCC
Confidence            44443332110                      000      01246788999999999999999999    99999999


Q ss_pred             CCCCCCccccccCCCCCCCCCCCcCCCC
Q 025601          211 FFQGVNWALLRCTTPPFVPPPFNRELVS  238 (250)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (250)
                      ||+.+.++.    ..|..+.+|-.+...
T Consensus       302 ~~~~~~~~~----~~~~~~~~~~~~~~~  325 (342)
T cd07854         302 YMSCYSCPF----DEPVSLHPFHIEDEL  325 (342)
T ss_pred             ccccccCCc----cccCCCCCccccccc
Confidence            998754322    334445555444443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.92  E-value=3.4e-25  Score=185.53  Aligned_cols=143  Identities=28%  Similarity=0.431  Sum_probs=110.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||++........                                           
T Consensus       123 ~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  159 (283)
T cd06617         123 LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA-------------------------------------------  159 (283)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEeecccccccccccc-------------------------------------------
Confidence            3899999999999999999999999998754321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG----EGHGSPVDWWTLGIFLFELFYGVTPFRGVD-  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~vl~elltg~~pf~~~~-  156 (250)
                                                 .....++..|+|||++.+    ..++.++|+||+||++|+|++|..||.... 
T Consensus       160 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  212 (283)
T cd06617         160 ---------------------------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT  212 (283)
T ss_pred             ---------------------------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc
Confidence                                       001246788999998865    346889999999999999999999997533 


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      ..+.+.+++...........++.++.+||.+||..+|++||+    +.+++.||||+.....
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~~  270 (283)
T cd06617         213 PFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPN----YPELLQHPFFELHLSK  270 (283)
T ss_pred             CHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhhhcccc
Confidence            334444444433222222357899999999999999999999    9999999999987654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.92  E-value=8.1e-25  Score=183.43  Aligned_cols=138  Identities=35%  Similarity=0.504  Sum_probs=106.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||+|+||+++.++.++|+|||++.........                                          
T Consensus       119 ~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------  156 (284)
T cd07860         119 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT------------------------------------------  156 (284)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....
T Consensus       157 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~  209 (284)
T cd07860         157 ---------------------------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ  209 (284)
T ss_pred             ---------------------------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                                       00113578899999987755 58899999999999999999999988776655


Q ss_pred             HHHHHHhccCC------------------CC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEF------------------PK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~------------------p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..++.......                  +.         ...++..+.++|.+||+.||++||+    +++++.||||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~~f  284 (284)
T cd07860         210 LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS----AKAALAHPFF  284 (284)
T ss_pred             HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC----HHHHhcCCCC
Confidence            55544322111                  00         1246788999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.92  E-value=6.4e-25  Score=184.02  Aligned_cols=138  Identities=30%  Similarity=0.541  Sum_probs=107.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       119 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  155 (286)
T cd07847         119 HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-------------------------------------------  155 (286)
T ss_pred             CCceecCCChhhEEEcCCCcEEECccccceecCCCcc-------------------------------------------
Confidence            6899999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+. .++.++||||+||++|+|++|..||.+....+.
T Consensus       156 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~  209 (286)
T cd07847         156 --------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ  209 (286)
T ss_pred             --------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                      00012467889999998764 478999999999999999999999998776655


Q ss_pred             HHHHHHhccC-------------------CCC----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALE-------------------FPK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~-------------------~p~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ...+......                   .+.          ...++..+.+|+.+||+.+|++||+    +.+++.|||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~~~~  285 (286)
T cd07847         210 LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS----CEELLEHPY  285 (286)
T ss_pred             HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC----HHHHhcCCC
Confidence            5444321110                   111          1246788999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       286 f  286 (286)
T cd07847         286 F  286 (286)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.92  E-value=7.6e-25  Score=188.40  Aligned_cols=148  Identities=30%  Similarity=0.464  Sum_probs=112.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++...........                                       
T Consensus       125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~---------------------------------------  165 (337)
T cd07852         125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPE---------------------------------------  165 (337)
T ss_pred             HCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccccc---------------------------------------
Confidence            36899999999999999999999999998855432211000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               ........++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.....
T Consensus       166 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~  220 (337)
T cd07852         166 -------------------------NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN  220 (337)
T ss_pred             -------------------------CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                                     0000123578899999988764 47899999999999999999999998776655


Q ss_pred             HHHHHHHhccCCC-----------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFP-----------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p-----------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+.......+                             ....++.++.+||.+||+.+|++||+    +.+++.||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps----~~~il~~~  296 (337)
T cd07852         221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT----AEEALEHP  296 (337)
T ss_pred             HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC----HHHHhhCh
Confidence            5444433221100                             01236888999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||+++.
T Consensus       297 ~~~~~~  302 (337)
T cd07852         297 YVAQFH  302 (337)
T ss_pred             hhhhhc
Confidence            999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.92  E-value=5.1e-25  Score=181.62  Aligned_cols=138  Identities=27%  Similarity=0.477  Sum_probs=108.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++.........                                          
T Consensus       118 ~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------  155 (256)
T cd06612         118 NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK------------------------------------------  155 (256)
T ss_pred             CCcccCCCCcceEEECCCCcEEEcccccchhcccCccc------------------------------------------
Confidence            58999999999999999999999999987543321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||++.+..++.++|||||||++++|++|..||.........
T Consensus       156 ---------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         156 ---------------------------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             ---------------------------cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence                                       00124678899999998888999999999999999999999999876655444


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+..... .......++..+.+|+.+||+.+|++||+    +++++.||||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~il~~~~~  256 (256)
T cd06612         209 FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS----AIQLLQHPFI  256 (256)
T ss_pred             hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC----HHHHhcCCCC
Confidence            33322211 12223357789999999999999999999    9999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.92  E-value=8.7e-25  Score=187.71  Aligned_cols=146  Identities=29%  Similarity=0.427  Sum_probs=110.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++........                                         
T Consensus       123 ~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-----------------------------------------  161 (332)
T cd07857         123 SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-----------------------------------------  161 (332)
T ss_pred             hCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-----------------------------------------
Confidence            369999999999999999999999999998654321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                              .........||..|+|||++.+ ..++.++||||+||++|+|++|..||.+.+...
T Consensus       162 ------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~  217 (332)
T cd07857         162 ------------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD  217 (332)
T ss_pred             ------------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH
Confidence                                    0000112468899999998876 458999999999999999999999998776554


Q ss_pred             HHHHHHHhccCC-----------------------C------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEF-----------------------P------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~-----------------------p------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      .+..++...+..                       +      ....++..+.+|+.+||+.||++|||    +.+++.||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~~ll~~~  293 (332)
T cd07857         218 QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS----VEEALEHP  293 (332)
T ss_pred             HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC----HHHHhcCh
Confidence            444433321110                       0      01235788999999999999999999    99999999


Q ss_pred             CCCCC
Q 025601          211 FFQGV  215 (250)
Q Consensus       211 ~~~~~  215 (250)
                      |+...
T Consensus       294 ~~~~~  298 (332)
T cd07857         294 YLAIW  298 (332)
T ss_pred             hhhhh
Confidence            99753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.8e-25  Score=183.37  Aligned_cols=139  Identities=27%  Similarity=0.425  Sum_probs=109.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||+|+||+++.++.++|+|||++.........                                         
T Consensus       131 ~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  169 (275)
T cd06608         131 ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR-----------------------------------------  169 (275)
T ss_pred             cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhh-----------------------------------------
Confidence            468999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                  .....++..|+|||++..     ..++.++|||||||++++|++|..||...
T Consensus       170 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  221 (275)
T cd06608         170 ----------------------------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM  221 (275)
T ss_pred             ----------------------------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence                                        001257889999998754     23678899999999999999999999876


Q ss_pred             ChHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          156 DHELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .....+.++...... ......++..+.+||.+||..||++|||    +++++.|||+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~~ll~~~~~  275 (275)
T cd06608         222 HPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF----MEELLEHPFI  275 (275)
T ss_pred             chHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC----HHHHhcCCCC
Confidence            666666665544322 2222347789999999999999999999    9999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=2.5e-25  Score=188.29  Aligned_cols=142  Identities=30%  Similarity=0.522  Sum_probs=111.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++........                                           
T Consensus       134 ~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-------------------------------------------  170 (297)
T cd06656         134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-------------------------------------------  170 (297)
T ss_pred             CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-------------------------------------------
Confidence            6899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......+++.|+|||.+.+..++.++|+||+||++|++++|..||.+.+.....
T Consensus       171 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~  224 (297)
T cd06656         171 --------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (297)
T ss_pred             --------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe
Confidence                                      000124778999999999888899999999999999999999999876544433


Q ss_pred             HHHHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+.... .....+..++..+.+|+.+||+.+|++||+    +++++.||||+...
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~  276 (297)
T cd06656         225 YLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS----AKELLQHPFLKLAK  276 (297)
T ss_pred             eeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCchhcccc
Confidence            3332221 112233457888999999999999999999    99999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.92  E-value=6.7e-25  Score=188.01  Aligned_cols=146  Identities=28%  Similarity=0.420  Sum_probs=115.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++..........                                        
T Consensus       121 ~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~----------------------------------------  160 (330)
T cd07834         121 SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK----------------------------------------  160 (330)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc----------------------------------------
Confidence            3699999999999999999999999999885543321100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                .......++..|+|||++.+. .++.++|+||+||++|+|++|..||.+....+
T Consensus       161 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~  214 (330)
T cd07834         161 --------------------------GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID  214 (330)
T ss_pred             --------------------------ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH
Confidence                                      000122578899999999887 68999999999999999999999999888766


Q ss_pred             HHHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+.......+.                             ...++..+.+||.+||+.+|++||+    +++++.||
T Consensus       215 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~ll~~~  290 (330)
T cd07834         215 QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT----ADEALAHP  290 (330)
T ss_pred             HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCc
Confidence            66665543322111                             1236788999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||+++.
T Consensus       291 ~~~~~~  296 (330)
T cd07834         291 YLAQLH  296 (330)
T ss_pred             cHHhhc
Confidence            999855

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=5.3e-25  Score=182.95  Aligned_cols=137  Identities=28%  Similarity=0.478  Sum_probs=105.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       125 ~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  161 (267)
T cd06645         125 KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA-------------------------------------------  161 (267)
T ss_pred             CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc-------------------------------------------
Confidence            5899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                ......|+..|+|||++.   ...++.++|+|||||++|+|++|..||......
T Consensus       162 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~  215 (267)
T cd06645         162 --------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM  215 (267)
T ss_pred             --------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch
Confidence                                      001235788999999975   344788999999999999999999999765544


Q ss_pred             HHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .....+.......+.   ...++..+.+|+.+||+.+|++||+    ++++++|||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~----~~~ll~~~~  267 (267)
T cd06645         216 RALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT----AEKLLQHPF  267 (267)
T ss_pred             hhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC----HHHHhcCCC
Confidence            444433333322221   1246788999999999999999999    999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.92  E-value=5.6e-25  Score=185.90  Aligned_cols=138  Identities=17%  Similarity=0.187  Sum_probs=102.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.++|+|||+++...........                                      
T Consensus       144 ~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~--------------------------------------  185 (294)
T PHA02882        144 EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEY--------------------------------------  185 (294)
T ss_pred             hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCccccc--------------------------------------
Confidence            368999999999999999999999999998654322110000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                              .........||+.|+|||++.+..++.++|||||||++++|++|..||.+......
T Consensus       186 ------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~  241 (294)
T PHA02882        186 ------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN  241 (294)
T ss_pred             ------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence                                    00001123689999999999998899999999999999999999999987743222


Q ss_pred             ---------HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 ---------LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ---------~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                               +.++.....   ....++..+.+++..|++.+|++||+    ..+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~----~~~l~  290 (294)
T PHA02882        242 LIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPD----YDALI  290 (294)
T ss_pred             HHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCC----HHHHH
Confidence                     122222222   23357899999999999999999999    66554

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.92  E-value=6.1e-25  Score=189.26  Aligned_cols=136  Identities=20%  Similarity=0.351  Sum_probs=106.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++.........                                          
T Consensus       192 ~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------------------------------------------  229 (337)
T cd05054         192 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------------------------------------------  229 (337)
T ss_pred             CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------------------------------------------
Confidence            68999999999999999999999999998554221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       230 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~  284 (337)
T cd05054         230 -------------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE  284 (337)
T ss_pred             -------------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH
Confidence                                     00001235678999999999889999999999999999997 9999987665555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      +...+........+..++.++.+++.+||+.+|++||+    +.++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs----~~ell~  328 (337)
T cd05054         285 FCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT----FSELVE  328 (337)
T ss_pred             HHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            55555554444445568899999999999999999999    776665

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.92  E-value=8.6e-25  Score=184.24  Aligned_cols=139  Identities=29%  Similarity=0.474  Sum_probs=107.4

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++. ++.++|+|||++.........                                         
T Consensus       129 ~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  167 (295)
T cd07837         129 HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS-----------------------------------------  167 (295)
T ss_pred             CCeeecCCChHHEEEecCCCeEEEeecccceecCCCccc-----------------------------------------
Confidence            68999999999999998 889999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+...
T Consensus       168 ----------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~  219 (295)
T cd07837         168 ----------------------------YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ  219 (295)
T ss_pred             ----------------------------cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence                                        0011357889999988764 47899999999999999999999999877666


Q ss_pred             HHHHHHHhccCC-----------------C---------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          160 TLANIVARALEF-----------------P---------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       160 ~~~~i~~~~~~~-----------------p---------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .+..+.......                 +         ....++.++.+||.+||..||++||+    +++++.||||+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~----~~eil~~~~~~  295 (295)
T cd07837         220 QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS----AKAALTHPYFD  295 (295)
T ss_pred             HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC----HHHHhcCCCcC
Confidence            655544321100                 0         01347888999999999999999999    99999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.92  E-value=6.5e-25  Score=183.89  Aligned_cols=135  Identities=24%  Similarity=0.364  Sum_probs=107.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||+++.........                                         
T Consensus       143 ~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~-----------------------------------------  181 (283)
T cd05048         143 HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYR-----------------------------------------  181 (283)
T ss_pred             CCeeccccccceEEEcCCCcEEECCCcceeecccccccc-----------------------------------------
Confidence            689999999999999999999999999875432211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       182 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~  235 (283)
T cd05048         182 --------------------------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV  235 (283)
T ss_pred             --------------------------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                      0001245788999999988889999999999999999998 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.... ..+.+..++.++.+|+.+||+.||++||+    +.++++
T Consensus       236 ~~~i~~~~-~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~----~~~i~~  278 (283)
T cd05048         236 IEMIRSRQ-LLPCPEDCPARVYALMIECWNEIPARRPR----FKDIHT  278 (283)
T ss_pred             HHHHHcCC-cCCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            65554433 33445678999999999999999999999    776654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=3.6e-25  Score=186.20  Aligned_cols=135  Identities=38%  Similarity=0.611  Sum_probs=118.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .++++|||||.+|||++.++.+||+||||+......                                            
T Consensus       171 knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--------------------------------------------  206 (668)
T KOG0611|consen  171 KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--------------------------------------------  206 (668)
T ss_pred             hccceecccchhheeecCCCCeeeeccchhhhhccc--------------------------------------------
Confidence            368999999999999999999999999997332211                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ..-..|+|++.|.+||++.|.+| ++.+|.||||++||.|+.|.+||.|.+...
T Consensus       207 --------------------------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~  260 (668)
T KOG0611|consen  207 --------------------------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR  260 (668)
T ss_pred             --------------------------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH
Confidence                                      11225799999999999999998 888999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ++.+|..+.+.-|.   .|..+..||..||..+|++|.|    ++++-.|=|+
T Consensus       261 lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~RRAT----ieDiAsHWWv  306 (668)
T KOG0611|consen  261 LVRQISRGAYREPE---TPSDASGLIRWMLMVNPERRAT----IEDIASHWWV  306 (668)
T ss_pred             HHHHhhcccccCCC---CCchHHHHHHHHHhcCcccchh----HHHHhhhhee
Confidence            99999888777554   5888999999999999999999    9998888775

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=1.3e-24  Score=179.60  Aligned_cols=137  Identities=23%  Similarity=0.410  Sum_probs=111.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.+||+|||++.........                                          
T Consensus       129 ~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------  166 (265)
T cd08217         129 NTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF------------------------------------------  166 (265)
T ss_pred             CcceecCCCHHHEEEecCCCEEEecccccccccCCccc------------------------------------------
Confidence            58999999999999999999999999987554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||++.+..++.++|+||||+++++|++|..||.........
T Consensus       167 ---------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  219 (265)
T cd08217         167 ---------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA  219 (265)
T ss_pred             ---------------------------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH
Confidence                                       00125788999999998888899999999999999999999999987755555


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+.... ....+..++..+.+++.+||+.+|++||+    ++++++|||+
T Consensus       220 ~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~il~~~~~  265 (265)
T cd08217         220 SKIKEGK-FRRIPYRYSSELNEVIKSMLNVDPDKRPS----TEELLQLPLI  265 (265)
T ss_pred             HHHhcCC-CCCCccccCHHHHHHHHHHccCCcccCCC----HHHHhhCCCC
Confidence            4444332 22344578899999999999999999999    9999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.92  E-value=9.5e-25  Score=183.28  Aligned_cols=139  Identities=29%  Similarity=0.465  Sum_probs=107.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       122 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  158 (286)
T cd06622         122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA-------------------------------------------  158 (286)
T ss_pred             CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc-------------------------------------------
Confidence            5899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC------CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG------HGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                  ....++..|+|||++.+..      ++.++|+||+||++|+|++|..||...
T Consensus       159 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  210 (286)
T cd06622         159 ----------------------------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE  210 (286)
T ss_pred             ----------------------------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence                                        0114677899999986532      478999999999999999999999765


Q ss_pred             ChHHHHHH---HHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          156 DHELTLAN---IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       156 ~~~~~~~~---i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ........   +.... ....+..++.++.+||.+||+.+|++||+    ++++++||||....
T Consensus       211 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~~~~~~~~~  269 (286)
T cd06622         211 TYANIFAQLSAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPT----YAQLLEHPWLVKYK  269 (286)
T ss_pred             chhhHHHHHHHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCC----HHHHhcChhhhhcc
Confidence            54443332   22221 22233458899999999999999999999    99999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.92  E-value=9.1e-25  Score=181.43  Aligned_cols=142  Identities=25%  Similarity=0.434  Sum_probs=109.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~-----------------------------------------  162 (265)
T cd06652         124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS-----------------------------------------  162 (265)
T ss_pred             hCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc-----------------------------------------
Confidence            368999999999999999999999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               ........++..|+|||++.+..++.++|+|||||++|+|++|..||........
T Consensus       163 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~  217 (265)
T cd06652         163 -------------------------GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA  217 (265)
T ss_pred             -------------------------ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH
Confidence                                     0000123478899999999888889999999999999999999999987765555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      ..++.........+..++..+.++|.+|+. +|+.||+    +++++.|||++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~----~~~il~~~~~~  265 (265)
T cd06652         218 IFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPS----ADELLRHTFVH  265 (265)
T ss_pred             HHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCC----HHHHhcCcccC
Confidence            544433322222344577889999999995 8999999    99999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=8e-25  Score=186.07  Aligned_cols=138  Identities=33%  Similarity=0.531  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++.......                                            
T Consensus       119 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------  154 (308)
T cd06615         119 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--------------------------------------------  154 (308)
T ss_pred             CCEEECCCChHHEEEecCCcEEEccCCCcccccccc--------------------------------------------
Confidence            589999999999999999999999999874321110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||++.+..++.++|+|||||++|+|++|..||....... .
T Consensus       155 ---------------------------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~  206 (308)
T cd06615         155 ---------------------------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-L  206 (308)
T ss_pred             ---------------------------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-H
Confidence                                       012357889999999988888999999999999999999999997654222 2


Q ss_pred             HHHHHhcc-------------------------------------CCCCCCCCChHHHHHHHHhcccCccccCCCccChH
Q 025601          162 ANIVARAL-------------------------------------EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS  204 (250)
Q Consensus       162 ~~i~~~~~-------------------------------------~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~  204 (250)
                      ..+.....                                     +......++.++.+|+.+||..+|++||+    ++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~  282 (308)
T cd06615         207 EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD----LK  282 (308)
T ss_pred             HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC----HH
Confidence            22111110                                     00001236778999999999999999999    99


Q ss_pred             HHhcCCCCCCC
Q 025601          205 AIKHHPFFQGV  215 (250)
Q Consensus       205 ~ll~hp~~~~~  215 (250)
                      +++.||||.+.
T Consensus       283 ~ll~~~~~~~~  293 (308)
T cd06615         283 ELTKHPFIKRA  293 (308)
T ss_pred             HHhcChhhhhc
Confidence            99999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=1.9e-25  Score=184.38  Aligned_cols=138  Identities=38%  Similarity=0.694  Sum_probs=105.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||.+.......                                            
T Consensus       117 ~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~--------------------------------------------  152 (260)
T PF00069_consen  117 KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN--------------------------------------------  152 (260)
T ss_dssp             TTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT--------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccc--------------------------------------------
Confidence            689999999999999999999999999875431000                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                               .......++..|+|||++. +..++.++||||+|+++++|++|..||......  
T Consensus       153 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~  207 (260)
T PF00069_consen  153 -------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ  207 (260)
T ss_dssp             -------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH
T ss_pred             -------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence                                     0111235788999999998 677899999999999999999999999987322  


Q ss_pred             -HHHHHHHHhccC--CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          159 -LTLANIVARALE--FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       159 -~~~~~i~~~~~~--~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                       ..+.+.......  .......+..+.++|.+||+.||++||+    +.++++||||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~l~~~~~~  260 (260)
T PF00069_consen  208 LEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS----AEELLKHPWF  260 (260)
T ss_dssp             HHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT----HHHHHTSGGG
T ss_pred             hhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC----HHHHhcCCCC
Confidence             233333222111  1111123489999999999999999999    9999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.92  E-value=1e-24  Score=183.53  Aligned_cols=151  Identities=46%  Similarity=0.854  Sum_probs=113.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++.........                                         
T Consensus       123 ~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  161 (290)
T cd05613         123 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-----------------------------------------  161 (290)
T ss_pred             hCCeeccCCCHHHeEECCCCCEEEeeCccceeccccccc-----------------------------------------
Confidence            368999999999999999999999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 ......++..|+|||++.+.  .++.++||||||+++|+|++|..||......
T Consensus       162 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~  214 (290)
T cd05613         162 ---------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK  214 (290)
T ss_pred             ---------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc
Confidence                                       00123578899999998753  3678999999999999999999999754322


Q ss_pred             ----HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCccccc
Q 025601          159 ----LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       159 ----~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                          .....+....  .+.+..++..+.+|+.+||+.+|++|++. ...+++++.||||..++|.-+.
T Consensus       215 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~  280 (290)
T cd05613         215 NSQAEISRRILKSE--PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLA  280 (290)
T ss_pred             ccHHHHHHHhhccC--CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHh
Confidence                2222222222  23345688999999999999999999843 2459999999999999997653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=5.6e-25  Score=186.13  Aligned_cols=142  Identities=25%  Similarity=0.551  Sum_probs=112.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++........                                           
T Consensus       136 ~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-------------------------------------------  172 (297)
T cd06659         136 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-------------------------------------------  172 (297)
T ss_pred             CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-------------------------------------------
Confidence            6899999999999999999999999998743221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|+|||++.+..++.++|||||||++++|++|..||........+
T Consensus       173 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~  226 (297)
T cd06659         173 --------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  226 (297)
T ss_pred             --------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      001235788999999998888999999999999999999999999877766555


Q ss_pred             HHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+...... ......++..+.++|.+||+.+|++||+    +++++.||||..-.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps----~~~ll~~~~~~~~~  278 (297)
T cd06659         227 KRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT----AQELLDHPFLLQTG  278 (297)
T ss_pred             HHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC----HHHHhhChhhccCC
Confidence            544332211 1222357889999999999999999999    99999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.92  E-value=6.3e-25  Score=181.99  Aligned_cols=143  Identities=28%  Similarity=0.460  Sum_probs=111.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++...........                                       
T Consensus       120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~---------------------------------------  160 (267)
T cd06610         120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR---------------------------------------  160 (267)
T ss_pred             hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc---------------------------------------
Confidence            36899999999999999999999999998755433211000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                .......++..|+|||++... .++.++|+|||||++++|++|..||...+...
T Consensus       161 --------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~  214 (267)
T cd06610         161 --------------------------KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK  214 (267)
T ss_pred             --------------------------cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh
Confidence                                      001123578899999998876 68999999999999999999999998877665


Q ss_pred             HHHHHHHhccC-CCCC---CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALE-FPKE---PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~-~p~~---~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+.++...... .+..   ..++..+.+|+.+||+.||++||+    +++++.||||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~ll~~p~~  267 (267)
T cd06610         215 VLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT----AEELLKHKFF  267 (267)
T ss_pred             hHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC----HHHHhhCCCC
Confidence            55555443221 1111   256789999999999999999999    9999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.92  E-value=5.5e-25  Score=182.42  Aligned_cols=137  Identities=34%  Similarity=0.520  Sum_probs=107.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++.........                                          
T Consensus       120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------  157 (265)
T cd06605         120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK------------------------------------------  157 (265)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh------------------------------------------
Confidence            68999999999999999999999999987433211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-----  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-----  156 (250)
                                                   ...++..|+|||++.+..++.++||||+||++++|++|..||....     
T Consensus       158 -----------------------------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  208 (265)
T cd06605         158 -----------------------------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG  208 (265)
T ss_pred             -----------------------------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence                                         0247788999999998889999999999999999999999997642     


Q ss_pred             hHHHHHHHHHhccCCCCCCC-CChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          157 HELTLANIVARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ....+..+...... ..... ++.++.+||.+||..+|++||+    +.+++.||||+.
T Consensus       209 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~~~  262 (265)
T cd06605         209 IFELLQYIVNEPPP-RLPSGKFSPDFQDFVNLCLIKDPRERPS----YKELLEHPFIKK  262 (265)
T ss_pred             HHHHHHHHhcCCCC-CCChhhcCHHHHHHHHHHcCCCchhCcC----HHHHhhCchhhc
Confidence            22233333322211 11222 7889999999999999999999    999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=9.4e-25  Score=182.78  Aligned_cols=142  Identities=29%  Similarity=0.481  Sum_probs=112.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       122 ~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------------------------------------  158 (280)
T cd06611         122 HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-------------------------------------------  158 (280)
T ss_pred             CCcccCCCChhhEEECCCCCEEEccCccchhhccccc-------------------------------------------
Confidence            6899999999999999999999999998643221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......++..|+|||++..     ..++.++|+||+||++|+|++|..||.+..
T Consensus       159 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~  212 (280)
T cd06611         159 --------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN  212 (280)
T ss_pred             --------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence                                      0012357889999999852     346789999999999999999999998877


Q ss_pred             hHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          157 HELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       157 ~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ....+.++...... ...+..++.++.+||.+||+.+|.+||+    +++++.||||.+..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~~  269 (280)
T cd06611         213 PMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT----AAELLKHPFVSDQS  269 (280)
T ss_pred             HHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC----HHHHhcChhhcccc
Confidence            66666555443222 2233467899999999999999999999    99999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.92  E-value=6.5e-25  Score=188.65  Aligned_cols=147  Identities=28%  Similarity=0.439  Sum_probs=109.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       125 ~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  164 (334)
T cd07855         125 SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH----------------------------------------  164 (334)
T ss_pred             HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC----------------------------------------
Confidence            3689999999999999999999999999875433211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               ........++..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+...
T Consensus       165 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~  219 (334)
T cd07855         165 -------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH  219 (334)
T ss_pred             -------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH
Confidence                                     000012357889999999866 447899999999999999999999998766444


Q ss_pred             HHHHHHHhccCC--------------------CC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEF--------------------PK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~--------------------p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      .+..+....+..                    +.         ....+..+.+||.+||+.+|++||+    +++++.||
T Consensus       220 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~l~~~  295 (334)
T cd07855         220 QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT----VEQALQHP  295 (334)
T ss_pred             HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCh
Confidence            333222211110                    00         1346888999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||++..
T Consensus       296 ~~~~~~  301 (334)
T cd07855         296 FLAQYH  301 (334)
T ss_pred             hhhhcc
Confidence            999755

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.92  E-value=1.6e-24  Score=181.66  Aligned_cols=141  Identities=33%  Similarity=0.521  Sum_probs=109.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       117 ~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  155 (286)
T cd07832         117 ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR-----------------------------------------  155 (286)
T ss_pred             HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC-----------------------------------------
Confidence            368999999999999999999999999987543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+.. ++.++||||+||++++|++|..+|.+.....
T Consensus       156 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~  208 (286)
T cd07832         156 ---------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE  208 (286)
T ss_pred             ---------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH
Confidence                                       000125788999999987654 6899999999999999999998898877666


Q ss_pred             HHHHHHHhccCC-------------------CC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEF-------------------PK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~-------------------p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .+..++......                   +.         ....+..+.+||.+||+.+|++||+    +++++.|||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~~l~h~~  284 (286)
T cd07832         209 QLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS----AAEALRHPY  284 (286)
T ss_pred             HHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC----HHHHhhCcC
Confidence            665554422110                   00         1245688999999999999999999    999999999


Q ss_pred             CC
Q 025601          212 FQ  213 (250)
Q Consensus       212 ~~  213 (250)
                      |.
T Consensus       285 ~~  286 (286)
T cd07832         285 FT  286 (286)
T ss_pred             cC
Confidence            83

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.92  E-value=7.5e-25  Score=191.24  Aligned_cols=134  Identities=19%  Similarity=0.321  Sum_probs=105.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.........                                        
T Consensus       230 ~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~----------------------------------------  269 (374)
T cd05106         230 SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV----------------------------------------  269 (374)
T ss_pred             HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee----------------------------------------
Confidence            3699999999999999999999999999875432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       270 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~  322 (374)
T cd05106         270 ---------------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS  322 (374)
T ss_pred             ---------------------------eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH
Confidence                                       0001134567999999988889999999999999999997 999998876665


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+++........+..++.++.+++.+||+.||++||++.+
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~  364 (374)
T cd05106         323 KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQ  364 (374)
T ss_pred             HHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            666666665555555567899999999999999999999443

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-24  Score=179.51  Aligned_cols=138  Identities=31%  Similarity=0.500  Sum_probs=108.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------  156 (262)
T cd06613         119 ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA------------------------------------------  156 (262)
T ss_pred             hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh------------------------------------------
Confidence            36899999999999999999999999998744321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                 ......++..|+|||.+.+.   .++.++|+||+||++|+|++|..||.+...
T Consensus       157 ---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~  209 (262)
T cd06613         157 ---------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP  209 (262)
T ss_pred             ---------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                                       00012577889999998776   688999999999999999999999988776


Q ss_pred             HHHHHHHHHhccCCC---CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          158 ELTLANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ......+.......+   ....++.++.+||.+||..+|+.||+    +.+++.|+|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~~~~  262 (262)
T cd06613         210 MRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT----ATKLLQHPF  262 (262)
T ss_pred             HHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC----HHHHhcCCC
Confidence            655555444322211   12345788999999999999999999    999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=1.1e-24  Score=187.51  Aligned_cols=145  Identities=26%  Similarity=0.403  Sum_probs=109.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       126 ~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------  163 (337)
T cd07858         126 SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD------------------------------------------  163 (337)
T ss_pred             hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc------------------------------------------
Confidence            36899999999999999999999999998854322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.. ..++.++|||||||++|+|++|..||.+.+...
T Consensus       164 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  216 (337)
T cd07858         164 ---------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH  216 (337)
T ss_pred             ---------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH
Confidence                                       0001246788999998875 458899999999999999999999998765443


Q ss_pred             HHHHHHHhccC-----------------------CC------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALE-----------------------FP------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~-----------------------~p------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+......                       .+      ....++..+.+||.+||+.+|++||+    +++++.||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps----~~ell~h~  292 (337)
T cd07858         217 QLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT----VEEALAHP  292 (337)
T ss_pred             HHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC----HHHHHcCc
Confidence            33322211100                       00      11357888999999999999999999    99999999


Q ss_pred             CCCCCCcc
Q 025601          211 FFQGVNWA  218 (250)
Q Consensus       211 ~~~~~~~~  218 (250)
                      ||..+.-.
T Consensus       293 ~~~~~~~~  300 (337)
T cd07858         293 YLASLHDP  300 (337)
T ss_pred             chhhhcCc
Confidence            99986533

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.91  E-value=2.4e-24  Score=185.91  Aligned_cols=138  Identities=33%  Similarity=0.504  Sum_probs=110.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++......                                             
T Consensus       137 ~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~---------------------------------------------  171 (343)
T cd07851         137 AGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE---------------------------------------------  171 (343)
T ss_pred             CCeecCCCCHHHeEECCCCCEEEcccccccccccc---------------------------------------------
Confidence            68999999999999999999999999987443211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||.+.+. .++.++|||||||++|+|++|..||.+......
T Consensus       172 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~  224 (343)
T cd07851         172 ---------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQ  224 (343)
T ss_pred             ---------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                       0012467889999998763 578999999999999999999999988776666


Q ss_pred             HHHHHHhccCCC-----------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFP-----------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p-----------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+.......+                             ....++..+.+||.+||..+|++|||    +.+++.|||
T Consensus       225 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt----~~ell~h~~  300 (343)
T cd07851         225 LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT----AAEALAHPY  300 (343)
T ss_pred             HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC----HHHHhcCCC
Confidence            655544321110                             01235889999999999999999999    999999999


Q ss_pred             CCCC
Q 025601          212 FQGV  215 (250)
Q Consensus       212 ~~~~  215 (250)
                      |+..
T Consensus       301 ~~~~  304 (343)
T cd07851         301 LAEY  304 (343)
T ss_pred             cccc
Confidence            9974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.91  E-value=1.7e-24  Score=178.64  Aligned_cols=138  Identities=25%  Similarity=0.442  Sum_probs=113.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++|+||+|+||+++.++.++|+|||++.........                                         
T Consensus       119 ~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  157 (256)
T cd08218         119 DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL-----------------------------------------  157 (256)
T ss_pred             hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh-----------------------------------------
Confidence            368999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....++..|+|||++.+..++.++|+|||||++++|++|..||......+.
T Consensus       158 ----------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~  209 (256)
T cd08218         158 ----------------------------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL  209 (256)
T ss_pred             ----------------------------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH
Confidence                                        0012467889999999888889999999999999999999999988777777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...++.+... +.+..++..+.++|.+||+.+|++||+    +.+++.||||
T Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~vl~~~~~  256 (256)
T cd08218         210 VLKIIRGSYP-PVSSHYSYDLRNLVSQLFKRNPRDRPS----VNSILEKNFI  256 (256)
T ss_pred             HHHHhcCCCC-CCcccCCHHHHHHHHHHhhCChhhCcC----HHHHhhCcCC
Confidence            7776655432 344568999999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.91  E-value=2.1e-24  Score=186.26  Aligned_cols=139  Identities=30%  Similarity=0.492  Sum_probs=110.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++.......                                            
T Consensus       137 ~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  172 (343)
T cd07880         137 AGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM--------------------------------------------  172 (343)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeecccccccccCc--------------------------------------------
Confidence            689999999999999999999999999875322100                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  ....+++.|+|||++.+ ..++.++|+||+||++++|++|..||.+......
T Consensus       173 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  224 (343)
T cd07880         173 ----------------------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ  224 (343)
T ss_pred             ----------------------------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                        01246788999999876 3478999999999999999999999998776655


Q ss_pred             HHHHHHhccCCC-----------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFP-----------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p-----------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +.++++.....+                             ....++..+.++|.+||+.||++|||    +.+++.|||
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t----~~~~l~~~~  300 (343)
T cd07880         225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT----AAEALAHPY  300 (343)
T ss_pred             HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC----HHHHhcCcc
Confidence            555443221110                             01356788999999999999999999    999999999


Q ss_pred             CCCCC
Q 025601          212 FQGVN  216 (250)
Q Consensus       212 ~~~~~  216 (250)
                      |+...
T Consensus       301 ~~~~~  305 (343)
T cd07880         301 FEEFH  305 (343)
T ss_pred             Hhhhc
Confidence            99864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.91  E-value=3.9e-24  Score=182.28  Aligned_cols=138  Identities=25%  Similarity=0.393  Sum_probs=112.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++.....                                              
T Consensus       140 ~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----------------------------------------------  173 (313)
T cd06633         140 HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----------------------------------------------  173 (313)
T ss_pred             CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----------------------------------------------
Confidence            6899999999999999999999999998632110                                              


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 .....++..|+|||++.   +..++.++|||||||++|+|++|..||.+....
T Consensus       174 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~  226 (313)
T cd06633         174 ---------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  226 (313)
T ss_pred             ---------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence                                       00125778899999985   345788999999999999999999999887766


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ....++.....+......++..+.+|+.+||+.+|++||+    +.+++.||||+..+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~----~~~~l~~~~~~~~~  280 (313)
T cd06633         227 SALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPA----SAELLRHDFVRRDR  280 (313)
T ss_pred             HHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCc
Confidence            6666665444333333457788999999999999999999    99999999999765

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.91  E-value=1.8e-24  Score=181.39  Aligned_cols=136  Identities=22%  Similarity=0.320  Sum_probs=107.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       142 ~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------------  181 (283)
T cd05091         142 SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK----------------------------------------  181 (283)
T ss_pred             HcCccccccchhheEecCCCceEecccccccccccchhee----------------------------------------
Confidence            3689999999999999999999999999876543211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+
T Consensus       182 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  234 (283)
T cd05091         182 ---------------------------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD  234 (283)
T ss_pred             ---------------------------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                       0001235678999999988889999999999999999998 888998887776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+..... .+.+..++..+.+|+..||+.+|++||+    +.+++.
T Consensus       235 ~~~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~----~~~i~~  278 (283)
T cd05091         235 VIEMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPR----FKDIHS  278 (283)
T ss_pred             HHHHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCC----HHHHHH
Confidence            6666655443 3445678999999999999999999999    665553

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.91  E-value=3.6e-24  Score=180.27  Aligned_cols=138  Identities=32%  Similarity=0.456  Sum_probs=102.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||+++.......                                           
T Consensus       122 ~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-------------------------------------------  158 (291)
T cd07870         122 QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ-------------------------------------------  158 (291)
T ss_pred             CCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC-------------------------------------------
Confidence            6899999999999999999999999998743221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChH-H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-L  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-~  159 (250)
                                                ......++..|+|||++.+. .++.++|||||||++|+|++|..||.+.... +
T Consensus       159 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~  212 (291)
T cd07870         159 --------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE  212 (291)
T ss_pred             --------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH
Confidence                                      00012467899999998764 4788999999999999999999999765532 2


Q ss_pred             HHHHHHHhccCC-----------------------CC-------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEF-----------------------PK-------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~-----------------------p~-------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .+.++....+..                       +.       ....+..+.+|+.+||..||++|||    +.+++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t----~~~~l~h  288 (291)
T cd07870         213 QLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS----AQDALLH  288 (291)
T ss_pred             HHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC----HHHHhcC
Confidence            233322111000                       00       0123567899999999999999999    9999999


Q ss_pred             CCC
Q 025601          210 PFF  212 (250)
Q Consensus       210 p~~  212 (250)
                      |||
T Consensus       289 ~~~  291 (291)
T cd07870         289 PYF  291 (291)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=3.7e-24  Score=181.80  Aligned_cols=138  Identities=25%  Similarity=0.358  Sum_probs=110.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++.......                                            
T Consensus       134 ~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~--------------------------------------------  169 (307)
T cd06607         134 HERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN--------------------------------------------  169 (307)
T ss_pred             CCceecCCCcccEEECCCCCEEEeecCcceecCCCC--------------------------------------------
Confidence            689999999999999999999999999874321110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   ...++..|+|||++.+   ..++.++||||||+++|+|++|..||.+....
T Consensus       170 -----------------------------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~  220 (307)
T cd06607         170 -----------------------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  220 (307)
T ss_pred             -----------------------------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH
Confidence                                         1246788999999853   44788999999999999999999999887766


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .....+............++..+.+||.+||..+|++||+    +.+++.||||....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~  274 (307)
T cd06607         221 SALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPS----SEELLKHRFVLRER  274 (307)
T ss_pred             HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcccC
Confidence            6555554433322223457889999999999999999999    99999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.91  E-value=2.4e-24  Score=178.16  Aligned_cols=138  Identities=21%  Similarity=0.287  Sum_probs=106.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       114 ~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  153 (257)
T cd05116         114 TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK----------------------------------------  153 (257)
T ss_pred             CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee----------------------------------------
Confidence            6899999999999999999999999998855432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|+|||||++|||++ |..||.+......
T Consensus       154 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  207 (257)
T cd05116         154 --------------------------AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV  207 (257)
T ss_pred             --------------------------ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0000124578999999988788999999999999999998 9999988776655


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      ...+. .....+.+..++.++.+||.+||+.||++||++.++...|
T Consensus       208 ~~~i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l  252 (257)
T cd05116         208 TQMIE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL  252 (257)
T ss_pred             HHHHH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHH
Confidence            55444 3334455567899999999999999999999965544444

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=3.3e-24  Score=176.98  Aligned_cols=138  Identities=29%  Similarity=0.452  Sum_probs=114.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||+|+||+++.++.+||+|||++........                                          
T Consensus       119 ~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~------------------------------------------  156 (256)
T cd08221         119 KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS------------------------------------------  156 (256)
T ss_pred             hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc------------------------------------------
Confidence            36899999999999999999999999998754322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+++.|+|||++.+..++.++|+||+||++++|++|..||.+....+.
T Consensus       157 ---------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~  209 (256)
T cd08221         157 ---------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL  209 (256)
T ss_pred             ---------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                                       00013578899999999888889999999999999999999999998877777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+..+... +....++.++.+++.+||..+|++||+    +++++.|+|+
T Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~s----~~~ll~~~~l  256 (256)
T cd08221         210 VVKIVQGNYT-PVVSVYSSELISLVHSLLQQDPEKRPT----ADEVLDQPLL  256 (256)
T ss_pred             HHHHHcCCCC-CCccccCHHHHHHHHHHcccCcccCCC----HHHHhhCcCC
Confidence            7777654433 333567899999999999999999999    9999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.91  E-value=1.5e-24  Score=184.58  Aligned_cols=150  Identities=24%  Similarity=0.412  Sum_probs=107.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||.+............                                      
T Consensus       119 ~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~--------------------------------------  160 (314)
T cd08216         119 SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV--------------------------------------  160 (314)
T ss_pred             HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc--------------------------------------
Confidence            368999999999999999999999999987543321110000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                              .........++..|+|||++.+.  .++.++|+||+||++++|++|..||......
T Consensus       161 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~  216 (314)
T cd08216         161 ------------------------VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT  216 (314)
T ss_pred             ------------------------cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                    00000123467889999998763  4789999999999999999999999876654


Q ss_pred             HHHHHHHHhccCC--------------------------------CCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          159 LTLANIVARALEF--------------------------------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       159 ~~~~~i~~~~~~~--------------------------------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      ........+....                                .....++.++.+|+.+||+.||++|||    ++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~l  292 (314)
T cd08216         217 QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS----ASQL  292 (314)
T ss_pred             HHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC----HHHH
Confidence            4433322221110                                000122356889999999999999999    9999


Q ss_pred             hcCCCCCCCC
Q 025601          207 KHHPFFQGVN  216 (250)
Q Consensus       207 l~hp~~~~~~  216 (250)
                      |.||||+++.
T Consensus       293 l~~p~~~~~~  302 (314)
T cd08216         293 LNHSFFKQCK  302 (314)
T ss_pred             hcCchHhhhc
Confidence            9999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.4e-24  Score=181.31  Aligned_cols=143  Identities=24%  Similarity=0.490  Sum_probs=109.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||+|+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  156 (277)
T cd06917         119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS------------------------------------------  156 (277)
T ss_pred             hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc------------------------------------------
Confidence            36899999999999999999999999998754322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......|+..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.....
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         157 ---------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             ---------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                                       0011357889999999875 346899999999999999999999998776554


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ....+.....+......++.++.+|+.+||+.||++||+    +.+++.|+||+...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~il~~~~~~~~~  262 (277)
T cd06917         210 AMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLS----AEELLKSKWIKAHS  262 (277)
T ss_pred             hhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcC----HHHHhhChHhhccc
Confidence            443332221111112237889999999999999999999    99999999998754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=2.1e-24  Score=181.14  Aligned_cols=138  Identities=28%  Similarity=0.399  Sum_probs=106.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||+++.......                                           
T Consensus       143 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  179 (286)
T cd06638         143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL-------------------------------------------  179 (286)
T ss_pred             CCccccCCCHHhEEECCCCCEEEccCCceeecccCCC-------------------------------------------
Confidence            6899999999999999999999999998754321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......|+..|+|||++..     ..++.++||||+||++|+|++|..||....
T Consensus       180 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~  233 (286)
T cd06638         180 --------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH  233 (286)
T ss_pred             --------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence                                      0001247889999998853     347889999999999999999999998766


Q ss_pred             hHHHHHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          157 HELTLANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       157 ~~~~~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ....+.++..... ....+..++..+.+||.+||+.||++||+    +.++++|+||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~~~~  286 (286)
T cd06638         234 PMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT----VSDLLQHVFI  286 (286)
T ss_pred             hhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC----HHHHhhcccC
Confidence            5444443322211 11123346788999999999999999999    9999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.91  E-value=3.2e-24  Score=181.73  Aligned_cols=143  Identities=30%  Similarity=0.439  Sum_probs=105.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.+||+|||++...........                                       
T Consensus       137 ~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------  177 (310)
T cd07865         137 RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKP---------------------------------------  177 (310)
T ss_pred             HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCC---------------------------------------
Confidence            36899999999999999999999999999865432211000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                .......++..|+|||++.+.. ++.++||||+|+++|+|++|..||.+.....
T Consensus       178 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~  231 (310)
T cd07865         178 --------------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQH  231 (310)
T ss_pred             --------------------------CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                      0001124678899999887654 6889999999999999999999998776554


Q ss_pred             HHHHHHHhccCCC-------------------C-----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFP-------------------K-----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p-------------------~-----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ....+..-.+..+                   .           ....+..+.+||.+||..||++||+    +++++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t----~~e~l~h  307 (310)
T cd07865         232 QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID----ADTALNH  307 (310)
T ss_pred             HHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC----HHHHhcC
Confidence            4433332111111                   0           0113466789999999999999999    9999999


Q ss_pred             CCC
Q 025601          210 PFF  212 (250)
Q Consensus       210 p~~  212 (250)
                      |||
T Consensus       308 ~~f  310 (310)
T cd07865         308 DFF  310 (310)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.91  E-value=5.1e-24  Score=178.50  Aligned_cols=138  Identities=32%  Similarity=0.497  Sum_probs=106.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|++|+||+|+||+++.++.++|+|||+++........                                          
T Consensus       118 ~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~------------------------------------------  155 (283)
T cd07835         118 HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT------------------------------------------  155 (283)
T ss_pred             CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+. .++.++|+||||+++|+|++|..||.+.+....
T Consensus       156 ---------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  208 (283)
T cd07835         156 ---------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ  208 (283)
T ss_pred             ---------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       0011357889999998765 468999999999999999999999988776555


Q ss_pred             HHHHHHhccC------------------C---------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALE------------------F---------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~------------------~---------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +.++......                  +         .....++..+.++|.+||+.+|++||+    +++++.||||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~il~~~~~  283 (283)
T cd07835         209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS----AKAALQHPYF  283 (283)
T ss_pred             HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC----HHHHhcCCCC
Confidence            5544332111                  0         012356788999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=3.4e-24  Score=176.66  Aligned_cols=137  Identities=26%  Similarity=0.416  Sum_probs=110.9

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+|+||||+||+++.+ +.++|+|||++........                                         
T Consensus       119 ~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-----------------------------------------  157 (256)
T cd08220         119 TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-----------------------------------------  157 (256)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc-----------------------------------------
Confidence            3699999999999999865 4679999998755322100                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   .....++..|+|||++.+..++.++||||+|+++++|++|..||.+.+...
T Consensus       158 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~  208 (256)
T cd08220         158 -----------------------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA  208 (256)
T ss_pred             -----------------------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH
Confidence                                         001246789999999998888999999999999999999999998887766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ....+..... .+.+..++..+.+++.+||+.+|++|||    +++++.||||
T Consensus       209 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~ll~~p~~  256 (256)
T cd08220         209 LVLKIMSGTF-APISDRYSPDLRQLILSMLNLDPSKRPQ----LSQIMAQPIC  256 (256)
T ss_pred             HHHHHHhcCC-CCCCCCcCHHHHHHHHHHccCChhhCCC----HHHHhhCCCC
Confidence            6666554332 2344568999999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=5.2e-24  Score=180.53  Aligned_cols=150  Identities=28%  Similarity=0.378  Sum_probs=109.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++..............                                    
T Consensus       133 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~------------------------------------  176 (311)
T cd07866         133 ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGG------------------------------------  176 (311)
T ss_pred             hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCC------------------------------------
Confidence            36899999999999999999999999998854332211000000                                    


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                            ...........+++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+...
T Consensus       177 ----------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~  234 (311)
T cd07866         177 ----------------------GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID  234 (311)
T ss_pred             ----------------------cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                  0000011123578899999988764 47899999999999999999999999887766


Q ss_pred             HHHHHHHhccCCCC----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEFPK----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~p~----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ....+.......+.                            ...++..+.+||.+||+.+|.+|||    +.+++.|||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~ell~~~~  310 (311)
T cd07866         235 QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT----ASDALEHPY  310 (311)
T ss_pred             HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC----HHHHhcCCC
Confidence            66655442211100                            0234467889999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       311 f  311 (311)
T cd07866         311 F  311 (311)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.91  E-value=2.6e-24  Score=187.90  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=106.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.........                                        
T Consensus       232 ~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~----------------------------------------  271 (375)
T cd05104         232 SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV----------------------------------------  271 (375)
T ss_pred             HCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc----------------------------------------
Confidence            3689999999999999999999999999985433211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       272 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~  324 (375)
T cd05104         272 ---------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS  324 (375)
T ss_pred             ---------------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH
Confidence                                       0001134567999999999889999999999999999997 899998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+++........+...+.++.+|+.+||+.||++||+    +.++++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~  369 (375)
T cd05104         325 KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPT----FKQIVQ  369 (375)
T ss_pred             HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcC----HHHHHH
Confidence            666666655444445567899999999999999999999    665553

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.91  E-value=2.4e-24  Score=178.19  Aligned_cols=141  Identities=30%  Similarity=0.529  Sum_probs=112.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++|+||+|+||+++.++.++|+|||++.........                                          
T Consensus       119 ~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~------------------------------------------  156 (264)
T cd06623         119 RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ------------------------------------------  156 (264)
T ss_pred             CCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc------------------------------------------
Confidence            68999999999999999999999999987543221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---hH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD---HE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~---~~  158 (250)
                                                 .....++..|+|||.+.+..++.++|+||||+++|+|++|..||....   ..
T Consensus       157 ---------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~  209 (264)
T cd06623         157 ---------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF  209 (264)
T ss_pred             ---------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence                                       001246788999999988888999999999999999999999998763   33


Q ss_pred             HHHHHHHHhccCCCCCCC-CChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .....+.. ......... ++..+.++|.+||..+|++||+    +++++.||||+..+
T Consensus       210 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~----~~~ll~~~~~~~~~  263 (264)
T cd06623         210 ELMQAICD-GPPPSLPAEEFSPEFRDFISACLQKDPKKRPS----AAELLQHPFIKKAD  263 (264)
T ss_pred             HHHHHHhc-CCCCCCCcccCCHHHHHHHHHHccCChhhCCC----HHHHHhCHHHHhcc
Confidence            44444443 223333445 7899999999999999999999    99999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.2e-24  Score=185.29  Aligned_cols=139  Identities=33%  Similarity=0.497  Sum_probs=108.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++......                                            
T Consensus       138 ~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------  173 (345)
T cd07877         138 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------  173 (345)
T ss_pred             HCCeeecCCChHHEEEcCCCCEEEeccccccccccc--------------------------------------------
Confidence            368999999999999999999999999987432110                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+ ..++.++||||+||++|+|++|..||.+.....
T Consensus       174 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~  225 (345)
T cd07877         174 ----------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID  225 (345)
T ss_pred             ----------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                        001257788999999876 457899999999999999999999998776555


Q ss_pred             HHHHHHHhcc-----------------------CCCC------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARAL-----------------------EFPK------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~-----------------------~~p~------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      .+..++....                       ..+.      ....+..+.+||.+||+.||.+|++    +.+++.||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t----~~e~l~h~  301 (345)
T cd07877         226 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHA  301 (345)
T ss_pred             HHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC----HHHHhcCh
Confidence            4444333211                       0111      1235788999999999999999999    99999999


Q ss_pred             CCCCC
Q 025601          211 FFQGV  215 (250)
Q Consensus       211 ~~~~~  215 (250)
                      ||.+.
T Consensus       302 ~f~~~  306 (345)
T cd07877         302 YFAQY  306 (345)
T ss_pred             hhhhc
Confidence            99973

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.91  E-value=6e-24  Score=182.60  Aligned_cols=157  Identities=26%  Similarity=0.347  Sum_probs=113.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++..................                                
T Consensus       137 ~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~--------------------------------  184 (335)
T PTZ00024        137 KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETM--------------------------------  184 (335)
T ss_pred             hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccc--------------------------------
Confidence            369999999999999999999999999988654322111000000000                                


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                           .  .........++..|+|||++.+.. ++.++|+|||||++|+|++|..||.+....+
T Consensus       185 ---------------------~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~  241 (335)
T PTZ00024        185 ---------------------Q--RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID  241 (335)
T ss_pred             ---------------------c--ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                 0  000001124678899999998754 6899999999999999999999999888776


Q ss_pred             HHHHHHHhccCCCC--------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          160 TLANIVARALEFPK--------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       160 ~~~~i~~~~~~~p~--------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .+..+.........                          ...++..+.+||.+||+.+|++||+    +++++.||||+
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~~~l~~~~~~  317 (335)
T PTZ00024        242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS----AKEALKHEYFK  317 (335)
T ss_pred             HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC----HHHHhcCcccC
Confidence            66655542211100                          1235788999999999999999999    99999999999


Q ss_pred             CCC
Q 025601          214 GVN  216 (250)
Q Consensus       214 ~~~  216 (250)
                      +..
T Consensus       318 ~~~  320 (335)
T PTZ00024        318 SDP  320 (335)
T ss_pred             CCC
Confidence            753

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.91  E-value=3e-24  Score=182.56  Aligned_cols=139  Identities=24%  Similarity=0.343  Sum_probs=112.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++......                                            
T Consensus       133 ~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--------------------------------------------  168 (308)
T cd06634         133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--------------------------------------------  168 (308)
T ss_pred             hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--------------------------------------------
Confidence            368999999999999999999999999987432110                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                   ....++..|+|||++.+   ..++.++|||||||++|+|++|..||.....
T Consensus       169 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  219 (308)
T cd06634         169 -----------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (308)
T ss_pred             -----------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence                                         01246788999999753   3478899999999999999999999987765


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ......+............++..+.+||.+||..+|++||+    +++++.|||+....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~ll~~~~~~~~~  274 (308)
T cd06634         220 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRER  274 (308)
T ss_pred             HHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCC----HHHHhhCccccccC
Confidence            55555555444433334468899999999999999999999    99999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.91  E-value=2.9e-24  Score=181.08  Aligned_cols=142  Identities=30%  Similarity=0.434  Sum_probs=108.9

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+|+||||+||+++. ++.+||+|||++.........                                         
T Consensus       121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  159 (294)
T PLN00009        121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT-----------------------------------------  159 (294)
T ss_pred             CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc-----------------------------------------
Confidence            68999999999999985 567999999988543221000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....+++.|+|||++.+. .++.++||||+||++|+|++|..||.+....+
T Consensus       160 ----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~  211 (294)
T PLN00009        160 ----------------------------FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID  211 (294)
T ss_pred             ----------------------------cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                        0011467889999998764 47899999999999999999999998877666


Q ss_pred             HHHHHHHhccCC---------------------C------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEF---------------------P------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~---------------------p------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+.++.......                     +      ....++..+.+++.+||+.+|++||+    +.+++.||||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps----~~~~l~~~~~  287 (294)
T PLN00009        212 ELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT----ARAALEHEYF  287 (294)
T ss_pred             HHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC----HHHHhcCchH
Confidence            555543311100                     0      01346788999999999999999999    9999999999


Q ss_pred             CCCC
Q 025601          213 QGVN  216 (250)
Q Consensus       213 ~~~~  216 (250)
                      ++++
T Consensus       288 ~~~~  291 (294)
T PLN00009        288 KDLG  291 (294)
T ss_pred             hHHh
Confidence            9865

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=1.8e-24  Score=180.87  Aligned_cols=143  Identities=27%  Similarity=0.379  Sum_probs=112.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||+|+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  156 (277)
T cd06642         119 SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------  156 (277)
T ss_pred             cCCeeccCCChheEEEeCCCCEEEccccccccccCcch------------------------------------------
Confidence            36999999999999999999999999998754322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||++.+..++.++|+|||||++++|++|..||........
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~  209 (277)
T cd06642         157 ---------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV  209 (277)
T ss_pred             ---------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence                                       00112467889999999988889999999999999999999999987655444


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ...+.... .......++..+.+++.+||+.+|++||+    +.+++.||||....+
T Consensus       210 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~~  261 (277)
T cd06642         210 LFLIPKNS-PPTLEGQYSKPFKEFVEACLNKDPRFRPT----AKELLKHKFITRYTK  261 (277)
T ss_pred             HhhhhcCC-CCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHHHhHHHHHHhh
Confidence            44333222 22223457889999999999999999999    999999999987554

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.91  E-value=5.6e-24  Score=179.63  Aligned_cols=143  Identities=33%  Similarity=0.463  Sum_probs=109.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .+||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       120 ~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  158 (298)
T cd07841         120 SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-----------------------------------------  158 (298)
T ss_pred             hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc-----------------------------------------
Confidence            368999999999999999999999999987543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||.+.+. .++.++|+|||||++++|++|..+|.+....+
T Consensus       159 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~  210 (298)
T cd07841         159 ----------------------------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID  210 (298)
T ss_pred             ----------------------------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH
Confidence                                        0011356789999988654 47899999999999999999988888777666


Q ss_pred             HHHHHHHhccCC---------------------C-----CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          160 TLANIVARALEF---------------------P-----KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       160 ~~~~i~~~~~~~---------------------p-----~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .+.++.......                     +     .....+..+.+||.+||+.+|++||+    +.+++.|+||+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s----~~e~l~~~~~~  286 (298)
T cd07841         211 QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT----ARQALEHPYFS  286 (298)
T ss_pred             HHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC----HHHHhhCcccc
Confidence            555544321100                     0     00234678999999999999999999    99999999999


Q ss_pred             CCC
Q 025601          214 GVN  216 (250)
Q Consensus       214 ~~~  216 (250)
                      +..
T Consensus       287 ~~~  289 (298)
T cd07841         287 NDP  289 (298)
T ss_pred             CCC
Confidence            955

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=3e-24  Score=180.21  Aligned_cols=139  Identities=33%  Similarity=0.482  Sum_probs=107.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++.......                                            
T Consensus       123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--------------------------------------------  158 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--------------------------------------------  158 (284)
T ss_pred             cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc--------------------------------------------
Confidence            589999999999999999999999999874321100                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE---  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~---  158 (250)
                                                 .....++..|+|||++.+..++.++|+||+||++|+|++|..||......   
T Consensus       159 ---------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~  211 (284)
T cd06620         159 ---------------------------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG  211 (284)
T ss_pred             ---------------------------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh
Confidence                                       00135788999999998888899999999999999999999999865432   


Q ss_pred             --------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 --------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 --------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                              .....+............++..+.+|+.+||+.||++||+    +.+++.|+||.+-
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt----~~e~~~~~~~~~~  272 (284)
T cd06620         212 QDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT----PQQLCAMPPFIQA  272 (284)
T ss_pred             hhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC----HHHHhcCcccccc
Confidence                    2222232222111112237889999999999999999999    9999999998663

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.91  E-value=6.2e-24  Score=181.32  Aligned_cols=136  Identities=25%  Similarity=0.377  Sum_probs=112.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||+|+||+++.++.++|+|||++......                                             
T Consensus       144 ~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~---------------------------------------------  178 (317)
T cd06635         144 HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA---------------------------------------------  178 (317)
T ss_pred             CCcccCCCCcccEEECCCCCEEEecCCCccccCCc---------------------------------------------
Confidence            68999999999999999999999999986432110                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ....++..|+|||++.   +..++.++|||||||++|+|++|..||......
T Consensus       179 ----------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~  230 (317)
T cd06635         179 ----------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  230 (317)
T ss_pred             ----------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH
Confidence                                        0124678899999984   345789999999999999999999999887766


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..+..+............++..+.+||.+||+.+|.+||+    +.+++.|+|+..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~  282 (317)
T cd06635         231 SALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPT----SEELLKHMFVLR  282 (317)
T ss_pred             HHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcC----HHHHHhChhhhc
Confidence            6666666655444445568889999999999999999999    999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.91  E-value=6.6e-24  Score=175.73  Aligned_cols=143  Identities=32%  Similarity=0.616  Sum_probs=108.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||+|+||+++.++.+||+|||++...........                                       
T Consensus       117 ~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~---------------------------------------  157 (264)
T cd06626         117 SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG---------------------------------------  157 (264)
T ss_pred             HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc---------------------------------------
Confidence            36899999999999999999999999998755432211000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                .......++..|+|||++.+..   .+.++|||||||+++++++|..||.....
T Consensus       158 --------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~  211 (264)
T cd06626         158 --------------------------EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN  211 (264)
T ss_pred             --------------------------ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc
Confidence                                      0000124678999999998765   78999999999999999999999977643


Q ss_pred             HHHHHHHHHhcc--CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          158 ELTLANIVARAL--EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       158 ~~~~~~i~~~~~--~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .......+....  ..+....++..+.+||.+||+.+|++||+    +++++.|||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~----~~~i~~~~~~  264 (264)
T cd06626         212 EFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPT----ASELLQHPFV  264 (264)
T ss_pred             hHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCC----HHHHhcCCCC
Confidence            333322222221  23333345889999999999999999999    9999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.91  E-value=2.5e-24  Score=196.40  Aligned_cols=145  Identities=19%  Similarity=0.268  Sum_probs=98.6

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +|||||||||+|||++. ++.+||+|||+++.+.....                                          
T Consensus       274 ~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~------------------------------------------  311 (566)
T PLN03225        274 TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGIN------------------------------------------  311 (566)
T ss_pred             CCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccc------------------------------------------
Confidence            68999999999999985 58999999999854321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC----------------------CCCchhHHHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE----------------------GHGSPVDWWTL  138 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~DiwSl  138 (250)
                                                .....+.+|+.|+|||++...                      .++.++||||+
T Consensus       312 --------------------------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl  365 (566)
T PLN03225        312 --------------------------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA  365 (566)
T ss_pred             --------------------------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence                                      000124678899999966432                      23445699999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHhcc----------CC----------CCCCCCChHHHHHHHHhcccCccccCC
Q 025601          139 GIFLFELFYGVTPFRGVDHELTLANIVARAL----------EF----------PKEPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       139 G~vl~elltg~~pf~~~~~~~~~~~i~~~~~----------~~----------p~~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      ||++|||+++..++..  ....+..++....          ..          ...........+||.+||++||++|||
T Consensus       366 GviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        366 GLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            9999999987665432  2222222222110          00          000112234568999999999999999


Q ss_pred             CccChHHHhcCCCCCCCCcccc
Q 025601          199 STKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       199 ~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                          ++++|+||||.+..+..+
T Consensus       444 ----a~e~L~Hpff~~~~~~~~  461 (566)
T PLN03225        444 ----AKAALAHPYFDREGLLGL  461 (566)
T ss_pred             ----HHHHhCCcCcCCCCcccc
Confidence                999999999999877533

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.91  E-value=2.8e-24  Score=176.07  Aligned_cols=134  Identities=37%  Similarity=0.563  Sum_probs=103.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++++|||++.......                                           
T Consensus       103 ~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------------------------------------------  139 (237)
T cd05576         103 REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------------------------------------------  139 (237)
T ss_pred             hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------------------------------------------
Confidence            3689999999999999999999999999764322110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                   ....++..|+|||++.+..++.++|+||+||++|+|++|..||....... 
T Consensus       140 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-  189 (237)
T cd05576         140 -----------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-  189 (237)
T ss_pred             -----------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-
Confidence                                         01134567999999988888999999999999999999998876433211 


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~  212 (250)
                           ........+..++..+.+||.+||+.||++|+++.+ .+++++.||||
T Consensus       190 -----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         190 -----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             -----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence                 111112233468899999999999999999999532 36999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.91  E-value=3.9e-24  Score=179.66  Aligned_cols=145  Identities=29%  Similarity=0.511  Sum_probs=114.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||+|+||+++.++.++|+|||++........                                          
T Consensus       134 ~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------  171 (286)
T cd06614         134 SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS------------------------------------------  171 (286)
T ss_pred             hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh------------------------------------------
Confidence            36999999999999999999999999997633221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|++||++.+..++.++|+||||+++|+|++|..||........
T Consensus       172 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~  224 (286)
T cd06614         172 ---------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA  224 (286)
T ss_pred             ---------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       00012467889999999888889999999999999999999999988776655


Q ss_pred             HHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          161 LANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       161 ~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      ...+...... ......++..+.+||.+||+.+|.+||+    +.+++.|+||+...|.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~il~~~~~~~~~~~  279 (286)
T cd06614         225 LFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS----AEELLQHPFLKKACPK  279 (286)
T ss_pred             HHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC----HHHHhhChHhhccCch
Confidence            5555443322 2222347899999999999999999999    9999999999996554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.91  E-value=4e-24  Score=179.16  Aligned_cols=137  Identities=34%  Similarity=0.553  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||+|+||+++.++.++|+|||++........                                           
T Consensus       126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  162 (287)
T cd07838         126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA-------------------------------------------  162 (287)
T ss_pred             CCeeeccCChhhEEEccCCCEEEeccCcceeccCCcc-------------------------------------------
Confidence            6899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||++.+..++.++|+||+||++|+|++|..||.+....+.+
T Consensus       163 ---------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~  215 (287)
T cd07838         163 ---------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQL  215 (287)
T ss_pred             ---------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHH
Confidence                                       00124678899999999888999999999999999999999999988877776


Q ss_pred             HHHHHhccC-----CCC--------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALE-----FPK--------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~-----~p~--------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .++......     ++.                    ...++..+.+||.+||+.||++||+    +++++.||||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~il~~~~~  287 (287)
T cd07838         216 DKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS----AFEALQHPYF  287 (287)
T ss_pred             HHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC----HHHHhcCcCC
Confidence            666542211     000                    0134577889999999999999999    9999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=4.9e-24  Score=175.78  Aligned_cols=137  Identities=29%  Similarity=0.492  Sum_probs=109.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.+||+|||++........                                           
T Consensus       121 ~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------  157 (258)
T cd06632         121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF-------------------------------------------  157 (258)
T ss_pred             CCcccCCCCHHHEEECCCCCEEEccCccceecccccc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|++||.+.... ++.++|+|||||++|+|++|..||........
T Consensus       158 ---------------------------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~  210 (258)
T cd06632         158 ---------------------------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA  210 (258)
T ss_pred             ---------------------------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH
Confidence                                       00135778899999987766 89999999999999999999999987765555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..++.........+..++..+.+|+.+||+.+|++||+    +++++.|||+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~~~~  258 (258)
T cd06632         211 VFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPT----AAELLEHPFV  258 (258)
T ss_pred             HHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcC----HHHHhcCCCC
Confidence            54444322222233467899999999999999999999    9999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.91  E-value=6.1e-24  Score=177.62  Aligned_cols=136  Identities=23%  Similarity=0.375  Sum_probs=106.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++..........                                        
T Consensus       140 ~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~----------------------------------------  179 (280)
T cd05049         140 SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYR----------------------------------------  179 (280)
T ss_pred             hCCeeccccccceEEEcCCCeEEECCcccceecccCccee----------------------------------------
Confidence            3689999999999999999999999999874322110000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       180 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~  232 (280)
T cd05049         180 ---------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE  232 (280)
T ss_pred             ---------------------------cCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0001135678999999998889999999999999999998 999998888777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+..+... ..+..++..+.+++.+||..||++||+    +.+++.
T Consensus       233 ~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~eil~  276 (280)
T cd05049         233 VIECITQGRLL-QRPRTCPSEVYDIMLGCWKRDPQQRIN----IKDIHE  276 (280)
T ss_pred             HHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence            76666544332 334568999999999999999999999    766653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=3.5e-24  Score=180.96  Aligned_cols=139  Identities=28%  Similarity=0.484  Sum_probs=107.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||+|+||+++.++.+||+|||++........                                           
T Consensus       134 ~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-------------------------------------------  170 (296)
T cd06618         134 HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-------------------------------------------  170 (296)
T ss_pred             CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-------------------------------------------
Confidence            5899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                 .....++..|+|||++.+..    ++.++||||||+++|+|++|..||.....
T Consensus       171 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  223 (296)
T cd06618         171 ---------------------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT  223 (296)
T ss_pred             ---------------------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh
Confidence                                       00113667899999987653    78899999999999999999999976433


Q ss_pred             -HHHHHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 -ELTLANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 -~~~~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                       .+.+..++.... ..+....++.++.+|+.+||..||++||+    +++++.||||..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~~~~~~~  278 (296)
T cd06618         224 EFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK----YRELLQHPFIRR  278 (296)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhc
Confidence             234444444332 22333347899999999999999999999    999999999986

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.91  E-value=6.2e-24  Score=179.00  Aligned_cols=139  Identities=28%  Similarity=0.435  Sum_probs=107.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       124 ~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----------------------------------------  162 (293)
T cd07843         124 DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP-----------------------------------------  162 (293)
T ss_pred             HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc-----------------------------------------
Confidence            368999999999999999999999999987543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||.+.+.. ++.++|+||+||++++|++|..||.+.....
T Consensus       163 ----------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~  214 (293)
T cd07843         163 ----------------------------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID  214 (293)
T ss_pred             ----------------------------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                                        00124678899999987654 6899999999999999999999998877666


Q ss_pred             HHHHHHHhccC-----------CC------------------CCCC-CChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALE-----------FP------------------KEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~-----------~p------------------~~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...++......           .+                  .... ++..+.+||.+||+.+|++|||    +.+++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t----~~ell~~  290 (293)
T cd07843         215 QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS----AEDALKH  290 (293)
T ss_pred             HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC----HHHHhcC
Confidence            55554432110           00                  0011 5788999999999999999999    9999999


Q ss_pred             CCC
Q 025601          210 PFF  212 (250)
Q Consensus       210 p~~  212 (250)
                      |||
T Consensus       291 ~~f  293 (293)
T cd07843         291 PYF  293 (293)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.91  E-value=3.4e-24  Score=162.77  Aligned_cols=142  Identities=29%  Similarity=0.476  Sum_probs=113.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +++++||||||.|++|..+|.+||+|||+++.......-                                         
T Consensus       119 shnvlhrdlkpqnllin~ngelkladfglarafgipvrc-----------------------------------------  157 (292)
T KOG0662|consen  119 SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC-----------------------------------------  157 (292)
T ss_pred             hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEe-----------------------------------------
Confidence            478999999999999999999999999998664432100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHH-hCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELF-YGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~ell-tg~~pf~~~~~~  158 (250)
                                                  -...+-|..|++|.++.|++ |++..|+||.||++.|+. .|.+.|+|.+-.
T Consensus       158 ----------------------------ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  158 ----------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             ----------------------------eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence                                        00125689999999999988 799999999999999998 689999999988


Q ss_pred             HHHHHHHHhccCCCCC---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +++.+|....+....+                           +.+...-.++++++|..+|+.|.+    |+.+++|||
T Consensus       210 dqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris----aeaalqhpy  285 (292)
T KOG0662|consen  210 DQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS----AEAALQHPY  285 (292)
T ss_pred             HHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC----HHHHhcCcc
Confidence            8888876543321111                           122244579999999999999999    999999999


Q ss_pred             CCCC
Q 025601          212 FQGV  215 (250)
Q Consensus       212 ~~~~  215 (250)
                      |...
T Consensus       286 f~d~  289 (292)
T KOG0662|consen  286 FSDF  289 (292)
T ss_pred             cccc
Confidence            9863

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=5.6e-24  Score=176.96  Aligned_cols=139  Identities=29%  Similarity=0.503  Sum_probs=104.1

Q ss_pred             CccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +.||+||||||+||+++. ++.++|+|||++........                                         
T Consensus       126 ~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-----------------------------------------  164 (268)
T cd06624         126 DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP-----------------------------------------  164 (268)
T ss_pred             HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-----------------------------------------
Confidence            368999999999999986 67999999998744321100                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                  ......++..|+|||++.+..  ++.++|+||+|+++|+|++|..||.....
T Consensus       165 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~  216 (268)
T cd06624         165 ----------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE  216 (268)
T ss_pred             ----------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence                                        000124678999999986543  78999999999999999999999976543


Q ss_pred             HHH-HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          158 ELT-LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       158 ~~~-~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ... ...+.........+..++.++.+|+.+||+.+|++||+    +.+++.||||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~ll~~~~~  268 (268)
T cd06624         217 PQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRAS----AHDLLQDPFL  268 (268)
T ss_pred             hhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCC----HHHHHhCCCC
Confidence            222 21211111122234467899999999999999999999    9999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.91  E-value=2.4e-24  Score=179.02  Aligned_cols=137  Identities=27%  Similarity=0.442  Sum_probs=104.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++........                                           
T Consensus       125 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  161 (267)
T cd06646         125 KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-------------------------------------------  161 (267)
T ss_pred             CCccccCCCHHHEEECCCCCEEECcCccceeeccccc-------------------------------------------
Confidence            6899999999999999999999999998854321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                ......++..|+|||.+.+   ..++.++|+||+||++|+|++|..||......
T Consensus       162 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~  215 (267)
T cd06646         162 --------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM  215 (267)
T ss_pred             --------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh
Confidence                                      0012357789999998853   34788999999999999999999999765544


Q ss_pred             HHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      .....+.......+.   ...++..+.+||.+||..+|++||+    +++++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~l~  267 (267)
T cd06646         216 RALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT----AERLLTHLF  267 (267)
T ss_pred             hhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC----HHHHhcCCC
Confidence            433333332222221   2356889999999999999999999    999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=4.6e-24  Score=181.97  Aligned_cols=133  Identities=21%  Similarity=0.337  Sum_probs=104.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       127 ~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~----------------------------------------  166 (316)
T cd05108         127 ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEY----------------------------------------  166 (316)
T ss_pred             hcCeeccccchhheEecCCCcEEEccccccccccCCCcce----------------------------------------
Confidence            3689999999999999999999999999986543211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       167 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~  219 (316)
T cd05108         167 ---------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  219 (316)
T ss_pred             ---------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                       0001124568999999998889999999999999999997 999998776554


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                       +.+++......+.+..++..+.+++.+||..+|++||++.+
T Consensus       220 -~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~  260 (316)
T cd05108         220 -ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRE  260 (316)
T ss_pred             -HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence             34555555556666778999999999999999999999444

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.5e-24  Score=176.30  Aligned_cols=141  Identities=26%  Similarity=0.429  Sum_probs=111.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||+++........                                         
T Consensus       124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  162 (264)
T cd06653         124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS-----------------------------------------  162 (264)
T ss_pred             hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc-----------------------------------------
Confidence            368999999999999999999999999988653221000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               ........++..|+|||++.+..++.++|+|||||++++|++|..||........
T Consensus       163 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  217 (264)
T cd06653         163 -------------------------GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA  217 (264)
T ss_pred             -------------------------CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH
Confidence                                     0000123578899999999988889999999999999999999999988766665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..++.........+..++..+.+++.+||+. +..||+    +.+++.|||+
T Consensus       218 ~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~-~~~r~~----~~~~~~~~~~  264 (264)
T cd06653         218 IFKIATQPTKPMLPDGVSDACRDFLKQIFVE-EKRRPT----AEFLLRHPFV  264 (264)
T ss_pred             HHHHHcCCCCCCCCcccCHHHHHHHHHHhcC-cccCcc----HHHHhcCCCC
Confidence            5555433333334557889999999999995 799999    9999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=7.5e-24  Score=177.68  Aligned_cols=139  Identities=32%  Similarity=0.534  Sum_probs=107.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.+||+|||++.........                                          
T Consensus       119 ~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~------------------------------------------  156 (288)
T cd07833         119 HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS------------------------------------------  156 (288)
T ss_pred             CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc------------------------------------------
Confidence            68999999999999999999999999987553322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+. .++.++||||+|+++|+|++|..||.+......
T Consensus       157 --------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~  210 (288)
T cd07833         157 --------------------------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ  210 (288)
T ss_pred             --------------------------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                      00113567889999999888 689999999999999999999999987765554


Q ss_pred             HHHHHHhccCCC------------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFP------------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p------------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      +..+.......+                              .+..++.++.+||.+||..+|++||+    +++++.||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~  286 (288)
T cd07833         211 LYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT----CDELLQHP  286 (288)
T ss_pred             HHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc----HHHHhcCC
Confidence            443322111100                              01234788999999999999999999    99999999


Q ss_pred             CC
Q 025601          211 FF  212 (250)
Q Consensus       211 ~~  212 (250)
                      ||
T Consensus       287 ~f  288 (288)
T cd07833         287 YF  288 (288)
T ss_pred             CC
Confidence            98

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=6.6e-24  Score=176.81  Aligned_cols=141  Identities=30%  Similarity=0.543  Sum_probs=107.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++|+||+|+||+++.++.++|+|||+++.........                                        
T Consensus       126 ~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~----------------------------------------  165 (272)
T cd06629         126 SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDND----------------------------------------  165 (272)
T ss_pred             hCCeeecCCChhhEEEcCCCeEEEeecccccccccccccc----------------------------------------
Confidence            3689999999999999999999999999875432110000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 ......++..|+|||++....  ++.++|+||||++++++++|..||......
T Consensus       166 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~  218 (272)
T cd06629         166 ---------------------------QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI  218 (272)
T ss_pred             ---------------------------ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence                                       001124778999999987654  789999999999999999999999766655


Q ss_pred             HHHHHHHHhccC--CCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          159 LTLANIVARALE--FPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       159 ~~~~~i~~~~~~--~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .....+......  ++.  ...++..+.+||.+||..+|++||+    +++++.|||+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~  272 (272)
T cd06629         219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT----ARELLQHPFI  272 (272)
T ss_pred             HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC----HHHHhhCCCC
Confidence            444433322211  111  1246889999999999999999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.91  E-value=5.3e-24  Score=179.82  Aligned_cols=142  Identities=29%  Similarity=0.547  Sum_probs=111.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       135 ~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  171 (292)
T cd06657         135 QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-------------------------------------------  171 (292)
T ss_pred             CCeecCCCCHHHEEECCCCCEEEcccccceecccccc-------------------------------------------
Confidence            6899999999999999999999999998643221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|+|||++.+..++.++|+||+|+++|+|++|..||.+.......
T Consensus       172 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~  225 (292)
T cd06657         172 --------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM  225 (292)
T ss_pred             --------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      001135788999999998877899999999999999999999999877655554


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+..... .......++..+.+++.+||+.+|.+||+    +++++.||||...-
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~----~~~ll~~~~~~~~~  277 (292)
T cd06657         226 KMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKAG  277 (292)
T ss_pred             HHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC----HHHHhcChHHhccC
Confidence            44332221 22233457899999999999999999999    99999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=9.2e-25  Score=175.60  Aligned_cols=145  Identities=27%  Similarity=0.373  Sum_probs=114.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||.|+|++++..+||||||+++...........                                      
T Consensus       174 sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMT--------------------------------------  215 (449)
T KOG0664|consen  174 TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMT--------------------------------------  215 (449)
T ss_pred             hcchhhccCCCccEEeccCceEEecccccccccchhhhhhhH--------------------------------------
Confidence            358999999999999999999999999999765443221111                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                    ..+-|..|+|||.++|.. |+.++||||+||++.||+-++..|...+..+
T Consensus       216 ------------------------------qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq  265 (449)
T KOG0664|consen  216 ------------------------------HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE  265 (449)
T ss_pred             ------------------------------HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH
Confidence                                          115688999999999976 8999999999999999999999999988877


Q ss_pred             HHHHHHHhccCCCCC--------------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKE--------------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~--------------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ++.-|.+..+....+                                ..-..+...++..||.+||.+|.+    .++.+
T Consensus       266 QL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris----~~~A~  341 (449)
T KOG0664|consen  266 QLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS----VEEAL  341 (449)
T ss_pred             HHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc----Hhhhc
Confidence            776665433221111                                112255778999999999999999    99999


Q ss_pred             cCCCCCCCCc
Q 025601          208 HHPFFQGVNW  217 (250)
Q Consensus       208 ~hp~~~~~~~  217 (250)
                      .|+|....+.
T Consensus       342 ~~~~~~e~R~  351 (449)
T KOG0664|consen  342 QHRYLEEGRL  351 (449)
T ss_pred             ccccccccce
Confidence            9999987654

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.4e-24  Score=184.53  Aligned_cols=117  Identities=26%  Similarity=0.411  Sum_probs=97.8

Q ss_pred             CCCccccccccccCCc--------ccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHH
Q 025601           97 GPEFVVEPVDVRSMSF--------VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD------HELTLA  162 (250)
Q Consensus        97 ~~~~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~------~~~~~~  162 (250)
                      .....++.+|.++++|        ++|.+|+||||+.|.+|+..+||||++|+++||+||.++|...+      ++++++
T Consensus       388 ~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  388 ECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             ccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            3344455677777777        67999999999999999999999999999999999999997654      667889


Q ss_pred             HHHHhccCCCCC----------------------------------------CCCChHHHHHHHHhcccCccccCCCccC
Q 025601          163 NIVARALEFPKE----------------------------------------PAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       163 ~i~~~~~~~p~~----------------------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      .|++..+.+|..                                        .....++.+||..||+++|++|+|    
T Consensus       468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~t----  543 (590)
T KOG1290|consen  468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPT----  543 (590)
T ss_pred             HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccccc----
Confidence            998877776654                                        112256789999999999999999    


Q ss_pred             hHHHhcCCCCCCCCc
Q 025601          203 ASAIKHHPFFQGVNW  217 (250)
Q Consensus       203 a~~ll~hp~~~~~~~  217 (250)
                      |.++|+|||+..+.-
T Consensus       544 A~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  544 AAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHHhcCccccCCCC
Confidence            999999999998763

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.91  E-value=7.1e-24  Score=178.38  Aligned_cols=132  Identities=21%  Similarity=0.344  Sum_probs=104.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.........                                        
T Consensus       138 ~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  177 (288)
T cd05093         138 SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR----------------------------------------  177 (288)
T ss_pred             hCCeeecccCcceEEEccCCcEEeccCCccccccCCceee----------------------------------------
Confidence            3699999999999999999999999999875432111000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       178 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~  230 (288)
T cd05093         178 ---------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE  230 (288)
T ss_pred             ---------------------------cCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                       0001135678999999998889999999999999999998 999998887777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      ....+..+.. .+....++.++.+|+.+||+.+|.+||++.
T Consensus       231 ~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  270 (288)
T cd05093         231 VIECITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIK  270 (288)
T ss_pred             HHHHHHcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            7766655443 234456889999999999999999999933

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.91  E-value=6.5e-24  Score=176.76  Aligned_cols=135  Identities=19%  Similarity=0.299  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||+++.+.......                                         
T Consensus       131 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  169 (272)
T cd05075         131 KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYR-----------------------------------------  169 (272)
T ss_pred             CCeeccccchhheEEcCCCCEEECCCCcccccCccccee-----------------------------------------
Confidence            689999999999999999999999999986543211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|++||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       170 --------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  223 (272)
T cd05075         170 --------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI  223 (272)
T ss_pred             --------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                      0001134678999999998889999999999999999998 8999988776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+..+ ...+....++..+.++|.+||+.+|++||+    +.+++.
T Consensus       224 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~  266 (272)
T cd05075         224 YDYLRQG-NRLKQPPDCLDGLYSLMSSCWLLNPKDRPS----FETLRC  266 (272)
T ss_pred             HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence            5555443 333445578899999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.91  E-value=5e-24  Score=181.18  Aligned_cols=142  Identities=27%  Similarity=0.431  Sum_probs=104.1

Q ss_pred             CccceeecCCCCcEEeCC----CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~----~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      ++||+||||||+||+++.    ++.+||+|||++.........                                     
T Consensus       126 ~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------  168 (316)
T cd07842         126 SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP-------------------------------------  168 (316)
T ss_pred             hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc-------------------------------------
Confidence            368999999999999999    899999999988554322110                                     


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   ........++..|+|||++.+. .++.++|||||||++++|++|..||.+.
T Consensus       169 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         169 -----------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             -----------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence                                         0000123578899999988774 4789999999999999999999999765


Q ss_pred             ChHH---------HHHHHHHhc--------------------------cCCCC---------CCCCChHHHHHHHHhccc
Q 025601          156 DHEL---------TLANIVARA--------------------------LEFPK---------EPAVPATAKDLISQLLAK  191 (250)
Q Consensus       156 ~~~~---------~~~~i~~~~--------------------------~~~p~---------~~~~~~~~~~ll~~~L~~  191 (250)
                      ....         .+..++...                          ..++.         ....+..+.+++.+||+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  299 (316)
T cd07842         220 EAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEY  299 (316)
T ss_pred             cccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcC
Confidence            4321         122211110                          00110         014567899999999999


Q ss_pred             CccccCCCccChHHHhcCCCC
Q 025601          192 DPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       192 dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ||++|||    +.+++.||||
T Consensus       300 ~P~~Rps----~~eil~~~~f  316 (316)
T cd07842         300 DPTKRIT----AEEALEHPYF  316 (316)
T ss_pred             CcccCcC----HHHHhcCCCC
Confidence            9999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.90  E-value=5.9e-24  Score=177.78  Aligned_cols=138  Identities=36%  Similarity=0.567  Sum_probs=108.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||.+.........                                          
T Consensus       117 ~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~------------------------------------------  154 (283)
T cd05118         117 HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP------------------------------------------  154 (283)
T ss_pred             CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc------------------------------------------
Confidence            68999999999999999999999999987443321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||.+.+..+.
T Consensus       155 ---------------------------~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  207 (283)
T cd05118         155 ---------------------------YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ  207 (283)
T ss_pred             ---------------------------ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       0012467789999998876 689999999999999999999999988776666


Q ss_pred             HHHHHHhccCC-------------------C---------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEF-------------------P---------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~-------------------p---------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+.......                   +         ....++.++.+||.+||+.||.+||+    +++++.||||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~ll~~~~~  283 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT----AEQALAHPYF  283 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC----HHHHhhCCCC
Confidence            55554322110                   0         01236788999999999999999999    9999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.90  E-value=4.7e-24  Score=178.45  Aligned_cols=142  Identities=28%  Similarity=0.380  Sum_probs=112.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|++|+||+|+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  156 (277)
T cd06640         119 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------------------------------------------  156 (277)
T ss_pred             hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||++.+..++.++|+|||||++|+|++|..||........
T Consensus       157 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~  209 (277)
T cd06640         157 ---------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV  209 (277)
T ss_pred             ---------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH
Confidence                                       00112467889999999888889999999999999999999999988775555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+... ........++..+.+|+.+||+.+|++||+    +++++.|+||....
T Consensus       210 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~~~~~  260 (277)
T cd06640         210 LFLIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPT----AKELLKHKFIVKNA  260 (277)
T ss_pred             hhhhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcC----HHHHHhChHhhhcc
Confidence            5443222 222223357888999999999999999999    99999999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.90  E-value=7.9e-24  Score=178.13  Aligned_cols=138  Identities=28%  Similarity=0.496  Sum_probs=101.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       122 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  159 (291)
T cd07844         122 RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT------------------------------------------  159 (291)
T ss_pred             CCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc------------------------------------------
Confidence            68999999999999999999999999987432110000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVD-HEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~-~~~  159 (250)
                                                . ....++..|+|||++.+. .++.++||||+||++|+|++|..||.+.. ..+
T Consensus       160 --------------------------~-~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~  212 (291)
T cd07844         160 --------------------------Y-SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED  212 (291)
T ss_pred             --------------------------c-cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH
Confidence                                      0 001356789999998764 47899999999999999999999997765 333


Q ss_pred             HHHHHHHhccC-------------------CCC---------CCCCC--hHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALE-------------------FPK---------EPAVP--ATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~-------------------~p~---------~~~~~--~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .+..+......                   .+.         ...+.  ..+.+++.+||+.+|.+||+    +.+++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps----~~e~l~~  288 (291)
T cd07844         213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS----AAEAMKH  288 (291)
T ss_pred             HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC----HHHHhcC
Confidence            33322211100                   000         01233  77889999999999999999    9999999


Q ss_pred             CCC
Q 025601          210 PFF  212 (250)
Q Consensus       210 p~~  212 (250)
                      |||
T Consensus       289 ~~f  291 (291)
T cd07844         289 PYF  291 (291)
T ss_pred             CCC
Confidence            998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=5.5e-24  Score=176.70  Aligned_cols=144  Identities=24%  Similarity=0.426  Sum_probs=108.4

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+|+||||+||+++.++ .++|+|||++..........                                       
T Consensus       121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------  161 (268)
T cd06630         121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA---------------------------------------  161 (268)
T ss_pred             hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC---------------------------------------
Confidence            36999999999999998776 58999999875543221000                                       


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ........++..|+|||++.+..++.++|+||+||++++|++|..||.......
T Consensus       162 --------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~  215 (268)
T cd06630         162 --------------------------GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN  215 (268)
T ss_pred             --------------------------CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc
Confidence                                      000112357889999999988888999999999999999999999997544322


Q ss_pred             H---HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          160 T---LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       160 ~---~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .   ..++.........+..++.++.+++.+||+.+|++||+    +.++++||||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~ll~~~~~~  268 (268)
T cd06630         216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPP----SRELLKHPVFR  268 (268)
T ss_pred             hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcC----HHHHhcCcccC
Confidence            2   22222222233334467899999999999999999999    99999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.1e-23  Score=173.05  Aligned_cols=139  Identities=50%  Similarity=0.889  Sum_probs=112.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++|+||+|+||+++.++.++|+|||++........                                           
T Consensus       112 ~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------  148 (250)
T cd05123         112 LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-------------------------------------------  148 (250)
T ss_pred             CCceecCCCcceEEEcCCCcEEEeecCcceecccCCC-------------------------------------------
Confidence            6899999999999999999999999998744322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|++||.+.+...+.++|+||||+++|++++|..||.........
T Consensus       149 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~  202 (250)
T cd05123         149 --------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIY  202 (250)
T ss_pred             --------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                      001235778899999998888899999999999999999999999887766666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+...  ..+.+...+..+.+||.+||..||++||++.+ +++++.||||
T Consensus       203 ~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~-~~~l~~~~~f  250 (250)
T cd05123         203 EKILKD--PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG-AEEIKAHPFF  250 (250)
T ss_pred             HHHhcC--CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc-HHHHHhCCCC
Confidence            665553  33445567999999999999999999999433 4999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.90  E-value=2.1e-24  Score=185.09  Aligned_cols=150  Identities=23%  Similarity=0.373  Sum_probs=106.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++++||+.+............                                      
T Consensus       119 ~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------  160 (328)
T cd08226         119 QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV--------------------------------------  160 (328)
T ss_pred             hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc--------------------------------------
Confidence            368999999999999999999999999754221110000000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                              .........++..|+|||++.+.  .++.++||||+||++|+|++|..||.+....
T Consensus       161 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~  216 (328)
T cd08226         161 ------------------------VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT  216 (328)
T ss_pred             ------------------------cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH
Confidence                                    00000001245679999999764  4789999999999999999999999877655


Q ss_pred             HHHHHHHHhccC---------------------------------------------CCCCCCCChHHHHHHHHhcccCc
Q 025601          159 LTLANIVARALE---------------------------------------------FPKEPAVPATAKDLISQLLAKDP  193 (250)
Q Consensus       159 ~~~~~i~~~~~~---------------------------------------------~p~~~~~~~~~~~ll~~~L~~dP  193 (250)
                      .....++.....                                             .+....++..+.+||.+||+.||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  296 (328)
T cd08226         217 QMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDP  296 (328)
T ss_pred             HHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCc
Confidence            544443322111                                             11122356789999999999999


Q ss_pred             cccCCCccChHHHhcCCCCCCCC
Q 025601          194 ERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       194 ~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ++|||    ++++|+||||+++.
T Consensus       297 ~~Rpt----a~e~l~~~~~~~~~  315 (328)
T cd08226         297 EKRPS----ASSLLSHAFFKQVK  315 (328)
T ss_pred             ccCCC----HHHHhhCHHHHHHH
Confidence            99999    99999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=2.8e-24  Score=181.52  Aligned_cols=143  Identities=29%  Similarity=0.511  Sum_probs=112.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       133 ~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~------------------------------------------  170 (293)
T cd06647         133 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------  170 (293)
T ss_pred             hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc------------------------------------------
Confidence            36899999999999999999999999998743321110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+++.|++||++.+..++.++|+|||||++|++++|..||........
T Consensus       171 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~  223 (293)
T cd06647         171 ---------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (293)
T ss_pred             ---------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence                                       00012577889999999888889999999999999999999999987665444


Q ss_pred             HHHHHHh-ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~-~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +..+... ...++....++..+.+|+.+||..+|++||+    +++++.|+||+..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~il~h~~~~~~~  276 (293)
T cd06647         224 LYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHPFLKIAK  276 (293)
T ss_pred             eeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcCc
Confidence            4333222 2223333456788999999999999999999    99999999999765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=6.2e-24  Score=178.11  Aligned_cols=138  Identities=33%  Similarity=0.541  Sum_probs=106.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++........                                           
T Consensus       119 ~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  155 (286)
T cd07846         119 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-------------------------------------------  155 (286)
T ss_pred             CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+. .++.++|||||||++++|++|..||.+....+.
T Consensus       156 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~  209 (286)
T cd07846         156 --------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ  209 (286)
T ss_pred             --------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence                                      00012467899999998764 368899999999999999999999987665554


Q ss_pred             HHHHHHhccC-------------------CC----------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALE-------------------FP----------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~-------------------~p----------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ...+......                   .+          ....++..+.+|+.+||+.+|++||+    +.+++.|||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~  285 (286)
T cd07846         210 LYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS----SSQLLHHEF  285 (286)
T ss_pred             HHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh----HHHHhcCCC
Confidence            4443321111                   01          01356788999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       286 ~  286 (286)
T cd07846         286 F  286 (286)
T ss_pred             C
Confidence            8

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.90  E-value=9.5e-24  Score=177.87  Aligned_cols=133  Identities=20%  Similarity=0.344  Sum_probs=103.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++..........                                        
T Consensus       141 ~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~----------------------------------------  180 (291)
T cd05094         141 SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYR----------------------------------------  180 (291)
T ss_pred             hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceee----------------------------------------
Confidence            3689999999999999999999999999885433211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus       181 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  233 (291)
T cd05094         181 ---------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE  233 (291)
T ss_pred             ---------------------------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                       0001246788999999998889999999999999999998 999998877776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ....+..... ......++..+.+++.+||+.+|++||++.+
T Consensus       234 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~  274 (291)
T cd05094         234 VIECITQGRV-LERPRVCPKEVYDIMLGCWQREPQQRLNIKE  274 (291)
T ss_pred             HHHHHhCCCC-CCCCccCCHHHHHHHHHHcccChhhCcCHHH
Confidence            6665544332 2334467899999999999999999999443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=8.2e-24  Score=176.90  Aligned_cols=136  Identities=20%  Similarity=0.308  Sum_probs=105.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|++|+||||+||+++.++.++|+|||+++..........                                       
T Consensus       137 ~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~---------------------------------------  177 (277)
T cd05062         137 ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK---------------------------------------  177 (277)
T ss_pred             HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeec---------------------------------------
Confidence            36899999999999999999999999998754332110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  ...-.++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       178 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~  229 (277)
T cd05062         178 ----------------------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ  229 (277)
T ss_pred             ----------------------------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                        000134678999999998889999999999999999998 789998887776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+..... ...+..++..+.+|+.+||+.+|++||+    +.+++.
T Consensus       230 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~  273 (277)
T cd05062         230 VLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIIS  273 (277)
T ss_pred             HHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            6665554432 3344568899999999999999999999    766654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.90  E-value=8.2e-24  Score=177.20  Aligned_cols=139  Identities=30%  Similarity=0.502  Sum_probs=106.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       118 ~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~-----------------------------------------  156 (284)
T cd07836         118 ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT-----------------------------------------  156 (284)
T ss_pred             HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc-----------------------------------------
Confidence            368999999999999999999999999987443211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|++||++.+. .++.++|+||+||++|+|++|..||.+.+..+
T Consensus       157 ----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         157 ----------------------------FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             ----------------------------cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                                        0011467889999998764 47899999999999999999999998877666


Q ss_pred             HHHHHHHhccC------------------CCC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALE------------------FPK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~------------------~p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...++......                  .+.         ...++..+.+++.+||+.||.+||+    +.+++.||||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~f  284 (284)
T cd07836         209 QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS----AHDALQHPWF  284 (284)
T ss_pred             HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC----HHHHhcCCCC
Confidence            55554332100                  000         0235778899999999999999999    9999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.90  E-value=1e-23  Score=175.91  Aligned_cols=160  Identities=40%  Similarity=0.695  Sum_probs=116.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|++|+||+|+||+++.++.++|+|||++.................                                  
T Consensus       121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~----------------------------------  166 (280)
T cd05581         121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDAT----------------------------------  166 (280)
T ss_pred             CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCc----------------------------------
Confidence            6899999999999999999999999998865433211100000000                                  


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                     ...............+.++..|+|||++.+..++.++|+||||++++++++|..||........+
T Consensus       167 ---------------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  231 (280)
T cd05581         167 ---------------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTF  231 (280)
T ss_pred             ---------------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence                           00000000011122346788999999998888899999999999999999999999988766666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+.......  +..++..+.+||.+||+.+|.+||++.+..++++.||||
T Consensus       232 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         232 QKILKLEYSF--PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHhcCCCC--CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            6665444443  346799999999999999999999933333999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-24  Score=197.96  Aligned_cols=148  Identities=30%  Similarity=0.431  Sum_probs=110.7

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccCCCCc-chhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSA-SNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      |||||||-+||||..+|+.||||||.+....... .........                                    
T Consensus       167 iIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve------------------------------------  210 (738)
T KOG1989|consen  167 IIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVE------------------------------------  210 (738)
T ss_pred             cchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHH------------------------------------
Confidence            8999999999999999999999999874433222 111100000                                    


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                         .   +-   .-.-|++|+|||++-   +...+.|+|||+|||+||-|+.+..||.+..   
T Consensus       211 -------------------~---eI---~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg---  262 (738)
T KOG1989|consen  211 -------------------E---EI---EKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG---  262 (738)
T ss_pred             -------------------H---HH---HhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---
Confidence                               0   00   013589999999874   5568999999999999999999999997653   


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH----hcCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI----KHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l----l~hp~~~~~~  216 (250)
                       ...|+++.+.+|....++..+++||..||+.||.+||+..+...++    -.+.++..+-
T Consensus       263 -~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~  322 (738)
T KOG1989|consen  263 -KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY  322 (738)
T ss_pred             -ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence             2357788999999889999999999999999999999955433332    2345565554

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.90  E-value=1.2e-23  Score=176.17  Aligned_cols=135  Identities=22%  Similarity=0.352  Sum_probs=104.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.+||+|||+++..........                                       
T Consensus       127 ~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~---------------------------------------  167 (279)
T cd05109         127 EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH---------------------------------------  167 (279)
T ss_pred             HCCeeccccccceEEEcCCCcEEECCCCceeecccccceee---------------------------------------
Confidence            36899999999999999999999999998855432110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus       168 ----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  219 (279)
T cd05109         168 ----------------------------ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE  219 (279)
T ss_pred             ----------------------------cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                        000124568999999988889999999999999999998 999998776554


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .. ..+......+....++..+.+++.+||..||+.||+    +.+++
T Consensus       220 ~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~----~~~l~  262 (279)
T cd05109         220 IP-DLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPR----FRELV  262 (279)
T ss_pred             HH-HHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            44 344444444555678999999999999999999999    66665

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.90  E-value=6.1e-25  Score=192.40  Aligned_cols=140  Identities=24%  Similarity=0.343  Sum_probs=105.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++|||||||..|||+..++.+||+||||+-...-......                                        
T Consensus       507 K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q----------------------------------------  546 (678)
T KOG0193|consen  507 KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ----------------------------------------  546 (678)
T ss_pred             hhhhhhhccccceEEccCCcEEEecccceeeeeeeccccc----------------------------------------
Confidence            6899999999999999999999999999833221100000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 ...-.|...|||||+++..   +|+..+||||||||.|||++|..||. ..+.
T Consensus       547 ---------------------------~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~  598 (678)
T KOG0193|consen  547 ---------------------------LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR  598 (678)
T ss_pred             ---------------------------cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh
Confidence                                       0001366899999999854   48999999999999999999999999 4445


Q ss_pred             HHHHHHHHhccCCCCC----CCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          159 LTLANIVARALEFPKE----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +++.-++-.++-++..    .+++.++++|+..||.+++++||.|.++...|+++
T Consensus       599 dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  599 DQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             hheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence            5544444444333332    46788999999999999999999977766655543

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.90  E-value=5.4e-24  Score=176.00  Aligned_cols=138  Identities=34%  Similarity=0.693  Sum_probs=109.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||+|+||+++.++.++|+|||++........                                           
T Consensus       119 ~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------  155 (258)
T cd05578         119 KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-------------------------------------------  155 (258)
T ss_pred             CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH--EL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~--~~  159 (250)
                                                 .....++..|+|||++.+..++.++|+||+|+++|+|++|..||.....  ..
T Consensus       156 ---------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  208 (258)
T cd05578         156 ---------------------------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD  208 (258)
T ss_pred             ---------------------------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH
Confidence                                       0012467889999999888889999999999999999999999987764  33


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+.+.... .....+..++..+.++|.+||+.||.+|+++.  +++++.||||
T Consensus       209 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~--~~~l~~~~~~  258 (258)
T cd05578         209 QIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDN--LKDLKNHPYF  258 (258)
T ss_pred             HHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCcc--HHHHhcCCCC
Confidence            33333332 23334456889999999999999999999922  3999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.90  E-value=3.4e-24  Score=169.80  Aligned_cols=142  Identities=20%  Similarity=0.334  Sum_probs=104.7

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccccC
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR   83 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (250)
                      ++||||||.||++..++..+|.|||.+....-....+.....-                                     
T Consensus       150 yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~l-------------------------------------  192 (302)
T KOG2345|consen  150 YAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRL-------------------------------------  192 (302)
T ss_pred             ccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHH-------------------------------------
Confidence            6899999999999999999999999886554332221110000                                     


Q ss_pred             ccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--H
Q 025601           84 PKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH--E  158 (250)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~--~  158 (250)
                                           +  -.++-..|..|+|||.+.   +...+.++|||||||++|+|+.|..||...-.  .
T Consensus       193 ---------------------Q--e~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg  249 (302)
T KOG2345|consen  193 ---------------------Q--EWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG  249 (302)
T ss_pred             ---------------------H--HHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence                                 0  001124688999999886   34579999999999999999999999953211  0


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .....+....+.+|....+++.+.+||..||+.||.+||+    +.+|+.+
T Consensus       250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~----i~~ll~~  296 (302)
T KOG2345|consen  250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPT----IPELLSK  296 (302)
T ss_pred             eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCC----HHHHHHH
Confidence            0111234556778888889999999999999999999999    8777653

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=1.2e-23  Score=176.50  Aligned_cols=136  Identities=21%  Similarity=0.365  Sum_probs=105.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       142 ~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  181 (283)
T cd05090         142 SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYR----------------------------------------  181 (283)
T ss_pred             hcCeehhccccceEEEcCCCcEEeccccccccccCCccee----------------------------------------
Confidence            3689999999999999999999999999886543211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       182 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~  234 (283)
T cd05090         182 ---------------------------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE  234 (283)
T ss_pred             ---------------------------cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                       0001235677999999988889999999999999999998 999998876554


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+ ......+.+..++..+.+++.+||+.||++||+    +.+++.
T Consensus       235 ~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~i~~  278 (283)
T cd05090         235 VIEMV-RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPR----FKDIHT  278 (283)
T ss_pred             HHHHH-HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence            44443 444444556678999999999999999999999    555543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.90  E-value=1.1e-23  Score=178.57  Aligned_cols=136  Identities=23%  Similarity=0.284  Sum_probs=101.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++.++.+||+|||+++.........                                        
T Consensus       156 ~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~----------------------------------------  195 (304)
T cd05096         156 SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR----------------------------------------  195 (304)
T ss_pred             HCCccccCcchhheEEcCCccEEECCCccceecccCceeE----------------------------------------
Confidence            3689999999999999999999999999885432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY--GVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt--g~~pf~~~~~~  158 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++  +..||.+....
T Consensus       196 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  248 (304)
T cd05096         196 ---------------------------IQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE  248 (304)
T ss_pred             ---------------------------ecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH
Confidence                                       0001235678999999988889999999999999999986  66788877666


Q ss_pred             HHHHHHHHh------ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 LTLANIVAR------ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 ~~~~~i~~~------~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ..+..+...      ......+..++..+.+|+.+||+.||++||+    +.++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs----~~~i~  299 (304)
T cd05096         249 QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPS----FSDIH  299 (304)
T ss_pred             HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcC----HHHHH
Confidence            555443221      1112223467899999999999999999999    66653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.1e-23  Score=175.25  Aligned_cols=135  Identities=21%  Similarity=0.305  Sum_probs=105.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       132 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~----------------------------------------  171 (273)
T cd05035         132 RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQ----------------------------------------  171 (273)
T ss_pred             CCeeccccchheEEECCCCeEEECCccceeeccccccccc----------------------------------------
Confidence            5899999999999999999999999998865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       172 ---------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~  224 (273)
T cd05035         172 ---------------------------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI  224 (273)
T ss_pred             ---------------------------cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                       000124567999999988889999999999999999998 9999988777666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... .....+..++..+.+++.+||+.||++||+    +.+++.
T Consensus       225 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~e~~~  267 (273)
T cd05035         225 YDYLRHG-NRLKQPEDCLDELYDLMYSCWRADPKDRPT----FTKLRE  267 (273)
T ss_pred             HHHHHcC-CCCCCCcCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            6555443 334455678999999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=1.6e-23  Score=172.66  Aligned_cols=137  Identities=28%  Similarity=0.406  Sum_probs=110.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++..........                                        
T Consensus       123 ~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~----------------------------------------  162 (262)
T cd00192         123 SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR----------------------------------------  162 (262)
T ss_pred             cCCcccCccCcceEEECCCCcEEEcccccccccccccccc----------------------------------------
Confidence            4689999999999999999999999999886544321100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++||||+||++|+|++ |..||.+.....
T Consensus       163 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  215 (262)
T cd00192         163 ---------------------------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE  215 (262)
T ss_pred             ---------------------------cccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0011246788999999988889999999999999999998 699999887666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ....+.. ......+..++.++.+++.+||..+|.+||+    +.+++.+
T Consensus       216 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~l~~~  260 (262)
T cd00192         216 VLEYLRK-GYRLPKPEYCPDELYELMLSCWQLDPEDRPT----FSELVER  260 (262)
T ss_pred             HHHHHHc-CCCCCCCccCChHHHHHHHHHccCCcccCcC----HHHHHHh
Confidence            6665544 4444556678999999999999999999999    8888754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=1.3e-23  Score=173.20  Aligned_cols=137  Identities=31%  Similarity=0.518  Sum_probs=109.6

Q ss_pred             ccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .||+|+||||+||+++.++ .++|+|||.+.........                                         
T Consensus       120 ~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  158 (257)
T cd08225         120 RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL-----------------------------------------  158 (257)
T ss_pred             CCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc-----------------------------------------
Confidence            6899999999999999875 4699999987443211100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....|+..|+|||++.+..++.++|+||||++++++++|..||........
T Consensus       159 ----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  210 (257)
T cd08225         159 ----------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL  210 (257)
T ss_pred             ----------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                                        0012477889999999888889999999999999999999999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..++...... +....++.++.++|.+||..+|++||+    +.+++.||||
T Consensus       211 ~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~~~~~  257 (257)
T cd08225         211 VLKICQGYFA-PISPNFSRDLRSLISQLFKVSPRDRPS----ITSILKRPFL  257 (257)
T ss_pred             HHHHhcccCC-CCCCCCCHHHHHHHHHHhccChhhCcC----HHHHhhCCCC
Confidence            6655543322 334467889999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=1.7e-23  Score=176.89  Aligned_cols=129  Identities=21%  Similarity=0.252  Sum_probs=101.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       138 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  174 (297)
T cd05089         138 KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK-------------------------------------------  174 (297)
T ss_pred             CCcccCcCCcceEEECCCCeEEECCcCCCccccceec-------------------------------------------
Confidence            6999999999999999999999999998742110000                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 ......+..|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       175 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~  227 (297)
T cd05089         175 ---------------------------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL  227 (297)
T ss_pred             ---------------------------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                       000023457999999988889999999999999999997 9999988877766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+... ...+.+..++..+.+|+.+||..+|.+||++.+
T Consensus       228 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  267 (297)
T cd05089         228 YEKLPQG-YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQ  267 (297)
T ss_pred             HHHHhcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            6655433 333445568999999999999999999999443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.90  E-value=2.2e-25  Score=181.33  Aligned_cols=139  Identities=27%  Similarity=0.468  Sum_probs=112.2

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccccC
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR   83 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (250)
                      =||||||..|||+.-+|+.||+|||++-.....-                                              
T Consensus       150 KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM----------------------------------------------  183 (502)
T KOG0574|consen  150 KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM----------------------------------------------  183 (502)
T ss_pred             HHHhhcccccEEEcccchhhhhhccccchhhhhH----------------------------------------------
Confidence            3899999999999999999999999984433211                                              


Q ss_pred             ccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 025601           84 PKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN  163 (250)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~  163 (250)
                                             ...+..+||+.|||||++...+|+.++||||||++..||..|++|+.+.-....+.-
T Consensus       184 -----------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM  240 (502)
T KOG0574|consen  184 -----------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM  240 (502)
T ss_pred             -----------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe
Confidence                                   112245899999999999999999999999999999999999999987654444332


Q ss_pred             HHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          164 IVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       164 i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      |-... ..+..+...+.++-+|++.||-++|+.|.|    |.+|++|||+++.
T Consensus       241 IPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T----A~~L~~H~FiknA  289 (502)
T KOG0574|consen  241 IPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT----ALRLCEHTFIKNA  289 (502)
T ss_pred             ccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH----HHHHhhhhhhcCC
Confidence            22221 224445567888999999999999999999    9999999999965

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.3e-23  Score=175.39  Aligned_cols=136  Identities=19%  Similarity=0.298  Sum_probs=106.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       137 ~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  176 (277)
T cd05032         137 AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYR----------------------------------------  176 (277)
T ss_pred             hCCccccccChheEEEcCCCCEEECCcccchhhccCcccc----------------------------------------
Confidence            4689999999999999999999999999875433211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|++++ |..||.+.....
T Consensus       177 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  229 (277)
T cd05032         177 ---------------------------KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE  229 (277)
T ss_pred             ---------------------------cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH
Confidence                                       0001235678999999988888999999999999999998 999998877766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+. .......+..++..+.+|+.+||+.+|++|||    +.+++.
T Consensus       230 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~~  273 (277)
T cd05032         230 VLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT----FLEIVS  273 (277)
T ss_pred             HHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence            665555 33334445568999999999999999999999    666653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.90  E-value=6.2e-24  Score=201.63  Aligned_cols=97  Identities=24%  Similarity=0.318  Sum_probs=73.8

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhccc
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAK  191 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~  191 (250)
                      .+||+.|||||++.+..++.++|||||||++|||++|..|+....  ..+..+.....+ +..........+++.+||++
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~~  251 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLP-PQILLNWPKEASFCLWLLHP  251 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcC-hhhhhcCHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999999988875422  122222222111 11112345677899999999


Q ss_pred             CccccCCCccChHHHhcCCCCCCC
Q 025601          192 DPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       192 dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +|.+||+    +++++.||||...
T Consensus       252 ~P~~Rps----~~eil~h~~~~~~  271 (793)
T PLN00181        252 EPSCRPS----MSELLQSEFINEP  271 (793)
T ss_pred             ChhhCcC----hHHHhhchhhhhh
Confidence            9999999    9999999999863

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.90  E-value=2.1e-23  Score=172.30  Aligned_cols=137  Identities=23%  Similarity=0.382  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.+||+|||+++..........                                        
T Consensus       116 ~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~----------------------------------------  155 (257)
T cd05040         116 KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV----------------------------------------  155 (257)
T ss_pred             CCccccccCcccEEEecCCEEEecccccccccccccccee----------------------------------------
Confidence            6899999999999999999999999998865432110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++++|++ |..||......+.
T Consensus       156 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  209 (257)
T cd05040         156 --------------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI  209 (257)
T ss_pred             --------------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001235678999999988889999999999999999998 9999988877776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.......+.+..++..+.+++.+||..+|++||+    +.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~~  253 (257)
T cd05040         210 LKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPT----FAALRE  253 (257)
T ss_pred             HHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCC----HHHHHH
Confidence            66665444444555678899999999999999999999    666653

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.90  E-value=2.4e-23  Score=172.36  Aligned_cols=138  Identities=18%  Similarity=0.252  Sum_probs=102.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.+||+|||+++...........                                      
T Consensus       116 ~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~--------------------------------------  157 (262)
T cd05058         116 SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH--------------------------------------  157 (262)
T ss_pred             hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec--------------------------------------
Confidence            368999999999999999999999999988543321100000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG-VTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg-~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|||++| ..||.......
T Consensus       158 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~  210 (262)
T cd05058         158 ---------------------------NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD  210 (262)
T ss_pred             ---------------------------ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                       00011346689999999888899999999999999999995 66677666555


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+. .....+.+..++..+.+++.+||+.+|++||+    +.+++.
T Consensus       211 ~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~il~  254 (262)
T cd05058         211 ITVYLL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPT----FSELVS  254 (262)
T ss_pred             HHHHHh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence            444443 33334444567899999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=2.5e-23  Score=172.70  Aligned_cols=131  Identities=20%  Similarity=0.355  Sum_probs=102.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~------------------------------------------  160 (263)
T cd05052         123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------  160 (263)
T ss_pred             CCEeecccCcceEEEcCCCcEEeCCCccccccccceee------------------------------------------
Confidence            68999999999999999999999999988543221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       161 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~  214 (263)
T cd05052         161 --------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  214 (263)
T ss_pred             --------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                      0000123567999999988889999999999999999998 9999988776655


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+ ........+..++.++.+++.+||..+|++||++.+
T Consensus       215 ~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~  254 (263)
T cd05052         215 YELL-EKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAE  254 (263)
T ss_pred             HHHH-HCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence            5444 334444555678999999999999999999999444

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.90  E-value=1.5e-23  Score=172.52  Aligned_cols=138  Identities=31%  Similarity=0.495  Sum_probs=112.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|++|+||+|+||+++.++.++|+|||++........                                          
T Consensus       121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------  158 (258)
T cd08215         121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD------------------------------------------  158 (258)
T ss_pred             hCCEecccCChHHeEEcCCCcEEECCccceeecccCcc------------------------------------------
Confidence            36899999999999999999999999998744322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......+++.|+|||.+.+..++.++|+||+|+++++|++|..||........
T Consensus       159 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~  211 (258)
T cd08215         159 ---------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLEL  211 (258)
T ss_pred             ---------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHH
Confidence                                       00012577889999999888889999999999999999999999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+.... ..+.+..++..+.+++..||..+|++||+    ++++|.||||
T Consensus       212 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~ll~~~~~  258 (258)
T cd08215         212 ALKILKGQ-YPPIPSQYSSELRNLVSSLLQKDPEERPS----IAQILQSPFI  258 (258)
T ss_pred             HHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCCCC
Confidence            65554433 33344478899999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.90  E-value=1.5e-23  Score=175.34  Aligned_cols=137  Identities=18%  Similarity=0.330  Sum_probs=104.6

Q ss_pred             CccceeecCCCCcEEeCCCC---CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSDG---HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      ++||+||||||+||+++.++   .+||+|||+++.........                                     
T Consensus       134 ~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~-------------------------------------  176 (277)
T cd05036         134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR-------------------------------------  176 (277)
T ss_pred             HCCEeecccchheEEEeccCCCcceEeccCccccccCCcccee-------------------------------------
Confidence            36899999999999998654   58999999886542111000                                     


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVD  156 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~  156 (250)
                                                    .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus       177 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~  226 (277)
T cd05036         177 ------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT  226 (277)
T ss_pred             ------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                                          0001123467999999998889999999999999999996 999999877


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ....... +........+..++..+.+|+.+||+.+|++||+    +.++++|
T Consensus       227 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps----~~~vl~~  274 (277)
T cd05036         227 NQEVMEF-VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPN----FATILER  274 (277)
T ss_pred             HHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence            6655443 3333344445678999999999999999999999    7777764

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=1.9e-23  Score=171.09  Aligned_cols=136  Identities=33%  Similarity=0.557  Sum_probs=107.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|++|+||+|+||+++.++.++|+|||.+........                                           
T Consensus       117 ~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------  153 (253)
T cd05122         117 NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-------------------------------------------  153 (253)
T ss_pred             CCEecCCCCHHHEEEccCCeEEEeecccccccccccc-------------------------------------------
Confidence            6899999999999999999999999998744332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....++..|+|||.+.+...+.++|+||||+++++|++|..||...+.....
T Consensus       154 ---------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  206 (253)
T cd05122         154 ---------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL  206 (253)
T ss_pred             ---------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence                                       01235778899999998888899999999999999999999999887555444


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ..+..... ..+....++..+.+++.+||+.||++||+    +.+++.|||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t----~~~~l~~~~  253 (253)
T cd05122         207 FKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT----AEQLLKHPF  253 (253)
T ss_pred             HHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC----HHHHhcCCC
Confidence            44433222 12222234889999999999999999999    999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.90  E-value=2.3e-23  Score=176.73  Aligned_cols=135  Identities=21%  Similarity=0.351  Sum_probs=107.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||+++.........                                         
T Consensus       160 ~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------------------  198 (302)
T cd05055         160 KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYV-----------------------------------------  198 (302)
T ss_pred             CCeehhhhccceEEEcCCCeEEECCCcccccccCCCcee-----------------------------------------
Confidence            589999999999999999999999999875432211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++||||+||++|+|++ |..||.+......
T Consensus       199 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~  252 (302)
T cd05055         199 --------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK  252 (302)
T ss_pred             --------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH
Confidence                                      0001235678999999998889999999999999999998 9999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.........+...+.++.+|+.+||..+|++||+    +.+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ell  295 (302)
T cd05055         253 FYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPT----FKQIV  295 (302)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHH
Confidence            66666555555555567899999999999999999999    66655

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.90  E-value=2.3e-23  Score=172.56  Aligned_cols=138  Identities=22%  Similarity=0.251  Sum_probs=105.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .+||+||||||+||+++.++.+||+|||++...........                                       
T Consensus       113 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------  153 (257)
T cd05115         113 GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK---------------------------------------  153 (257)
T ss_pred             hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee---------------------------------------
Confidence            36899999999999999999999999998754321110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ....-.++..|+|||++.+..++.++|||||||++|++++ |..||.+.....
T Consensus       154 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  206 (257)
T cd05115         154 ---------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE  206 (257)
T ss_pred             ---------------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                                       0000123568999999988888999999999999999996 999999887776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHH
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASA  205 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~  205 (250)
                      ....+. .....+.+..++.++.++|.+||..+|++||++.+.+..
T Consensus       207 ~~~~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         207 VMSFIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             HHHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            655443 334445566789999999999999999999995554433

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.90  E-value=3.9e-23  Score=177.32  Aligned_cols=139  Identities=30%  Similarity=0.481  Sum_probs=106.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||+|+||+++.++.++|+|||++......                                            
T Consensus       126 ~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------  161 (328)
T cd07856         126 SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------  161 (328)
T ss_pred             hCCcccCCCCHHHEeECCCCCEEeCccccccccCCC--------------------------------------------
Confidence            368999999999999999999999999987432110                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+ ..++.++||||+||++|+|++|..||.+.....
T Consensus       162 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         162 ----------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             ----------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                        001246788999999876 458999999999999999999999998776543


Q ss_pred             HHHHHHHhcc--------------------------CCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARAL--------------------------EFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~--------------------------~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+.+..+                          ..+.   ...++..+.++|.+||+.+|++||+    +++++.||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t----~~ell~~~  289 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS----AAEALAHP  289 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCC
Confidence            3322221111                          0010   1246788999999999999999999    99999999


Q ss_pred             CCCCC
Q 025601          211 FFQGV  215 (250)
Q Consensus       211 ~~~~~  215 (250)
                      ||...
T Consensus       290 ~~~~~  294 (328)
T cd07856         290 YLAPY  294 (328)
T ss_pred             ccccc
Confidence            99753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.2e-23  Score=171.73  Aligned_cols=134  Identities=22%  Similarity=0.365  Sum_probs=105.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++........                                         
T Consensus       121 ~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  159 (261)
T cd05068         121 AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE-----------------------------------------  159 (261)
T ss_pred             hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-----------------------------------------
Confidence            368999999999999999999999999988554311000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 .......+..|+|||++.+..++.++||||||+++++|++ |+.||.+.....
T Consensus       160 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  212 (261)
T cd05068         160 ---------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE  212 (261)
T ss_pred             ---------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0000123457999999988889999999999999999999 999999887766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .+..+. .....+....++..+.+++.+||+.+|++||+    +.+++
T Consensus       213 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~l~  255 (261)
T cd05068         213 VLQQVD-QGYRMPCPPGCPKELYDIMLDCWKEDPDDRPT----FETLQ  255 (261)
T ss_pred             HHHHHH-cCCCCCCCCcCCHHHHHHHHHHhhcCcccCCC----HHHHH
Confidence            666554 34444555678999999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.90  E-value=2.3e-23  Score=176.14  Aligned_cols=139  Identities=29%  Similarity=0.397  Sum_probs=107.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.+||+|||++.........                                          
T Consensus       135 ~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  172 (302)
T cd07864         135 KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR------------------------------------------  172 (302)
T ss_pred             CCeecCCCCHHHEEECCCCcEEeCcccccccccCCccc------------------------------------------
Confidence            68999999999999999999999999987543321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+. .++.++||||+||++++|++|+.||........
T Consensus       173 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~  226 (302)
T cd07864         173 --------------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ  226 (302)
T ss_pred             --------------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                      00001356789999988754 478999999999999999999999988776666


Q ss_pred             HHHHHHhccCCC----------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFP----------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p----------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+........                            ....++..+.+|+.+||+.+|++||+    +++++.||||
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~~~~  302 (302)
T cd07864         227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT----AEEALNSPWL  302 (302)
T ss_pred             HHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCC
Confidence            655544221100                            11246889999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.90  E-value=3.5e-24  Score=194.16  Aligned_cols=137  Identities=24%  Similarity=0.372  Sum_probs=115.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +.+|||||-.+|+|+..+-.+||+||||++..-....-..                                        
T Consensus       622 ~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~----------------------------------------  661 (774)
T KOG1026|consen  622 HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKV----------------------------------------  661 (774)
T ss_pred             CcccccchhhhhceeccceEEEecccccchhhhhhhhhcc----------------------------------------
Confidence            5689999999999999999999999999866543321100                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                +..+ .-..+|||||.|...++++++||||+|+++||+++ |+.|+.+.++.++
T Consensus       662 --------------------------~~~t-~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV  714 (774)
T KOG1026|consen  662 --------------------------RGNT-LLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV  714 (774)
T ss_pred             --------------------------cCCc-eeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH
Confidence                                      0000 12368999999999999999999999999999994 9999999999999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      ++.|-++.. .+.++++|.++.+||..||+.+|++||+|.++...|
T Consensus       715 Ie~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L  759 (774)
T KOG1026|consen  715 IECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRL  759 (774)
T ss_pred             HHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence            998887776 889999999999999999999999999987755443

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=4.1e-24  Score=187.95  Aligned_cols=135  Identities=25%  Similarity=0.450  Sum_probs=111.7

Q ss_pred             ceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            4 IVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         4 iiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      |||||||.+|||+..+ |.+||+|+|||..+..+..                                            
T Consensus       166 IIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a--------------------------------------------  201 (632)
T KOG0584|consen  166 IIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA--------------------------------------------  201 (632)
T ss_pred             ccccccccceEEEcCCcCceeecchhHHHHhhcccc--------------------------------------------
Confidence            8999999999999854 9999999999966544321                                            


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA  162 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~  162 (250)
                                                 .+.+|||-|||||+.- ..|+..+||||||++++||+|+.+|++.-.+..+++
T Consensus       202 ---------------------------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIY  253 (632)
T KOG0584|consen  202 ---------------------------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIY  253 (632)
T ss_pred             ---------------------------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHH
Confidence                                       1348999999999887 569999999999999999999999999887777777


Q ss_pred             HHHHhccCCCCCCC-CChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          163 NIVARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       163 ~i~~~~~~~p~~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +.+..+........ -.+++++||.+||.. ...|++    |.+||.||||..-
T Consensus       254 KKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~s----a~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  254 KKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLS----AKELLKDPFFDED  302 (632)
T ss_pred             HHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccC----HHHHhhChhhccc
Confidence            76655543222222 247899999999999 899999    9999999999974

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.90  E-value=2.6e-23  Score=171.28  Aligned_cols=136  Identities=24%  Similarity=0.384  Sum_probs=111.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ..|++|+||+|+||+++.++.+||+|||+++.......                                          
T Consensus       121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~------------------------------------------  158 (256)
T cd08530         121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA------------------------------------------  158 (256)
T ss_pred             hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc------------------------------------------
Confidence            36899999999999999999999999998744322100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                   ....++..|++||.+.+..++.++|+||+|+++++|++|+.||...+....
T Consensus       159 -----------------------------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~  209 (256)
T cd08530         159 -----------------------------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL  209 (256)
T ss_pred             -----------------------------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                         001367789999999888889999999999999999999999998876665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+...... +....++.++.+++.+||+.+|++||+    +.+++.||++
T Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~l~~p~~  256 (256)
T cd08530         210 RYKVQRGKYP-PIPPIYSQDLQNFIRSMLQVKPKLRPN----CDKILASPAV  256 (256)
T ss_pred             HHHHhcCCCC-CCchhhCHHHHHHHHHHcCCCcccCCC----HHHHhcCCCC
Confidence            5555443332 333468899999999999999999999    9999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.90  E-value=2.1e-23  Score=174.84  Aligned_cols=135  Identities=20%  Similarity=0.344  Sum_probs=105.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++..........                                        
T Consensus       140 ~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~----------------------------------------  179 (280)
T cd05092         140 SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR----------------------------------------  179 (280)
T ss_pred             HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceee----------------------------------------
Confidence            3689999999999999999999999999875432110000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       180 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  232 (280)
T cd05092         180 ---------------------------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE  232 (280)
T ss_pred             ---------------------------cCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence                                       0001135678999999998889999999999999999998 999998777666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+.... ....+..++..+.+||.+||+.||++||+    +.+++
T Consensus       233 ~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~----~~~l~  275 (280)
T cd05092         233 AIECITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMV----IKDIH  275 (280)
T ss_pred             HHHHHHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence            665554433 33445578999999999999999999999    65554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=4e-23  Score=172.96  Aligned_cols=138  Identities=35%  Similarity=0.494  Sum_probs=106.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||+|+||+++.++.++|+|||++........                                          
T Consensus       117 ~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------  154 (283)
T cd07830         117 KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP------------------------------------------  154 (283)
T ss_pred             HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC------------------------------------------
Confidence            36899999999999999999999999998754322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+. .++.++|+||||+++++|++|..||.+....+
T Consensus       155 ----------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~  206 (283)
T cd07830         155 ----------------------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID  206 (283)
T ss_pred             ----------------------------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH
Confidence                                        0012467889999988653 47899999999999999999999998877665


Q ss_pred             HHHHHHHhccCCCC----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEFPK----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~p~----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ...++.........                            ....+..+.+||.+||+.+|++||+    +++++.|||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~~~~  282 (283)
T cd07830         207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT----ASQALQHPY  282 (283)
T ss_pred             HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC----HHHHhhCCC
Confidence            55544432211100                            0123678999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       283 ~  283 (283)
T cd07830         283 F  283 (283)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.1e-23  Score=170.49  Aligned_cols=138  Identities=31%  Similarity=0.560  Sum_probs=111.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       117 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  155 (254)
T cd06627         117 EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-----------------------------------------  155 (254)
T ss_pred             hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-----------------------------------------
Confidence            369999999999999999999999999988554321110                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....++..|+|||.+.+...+.++|+||+|+++++|++|..||........
T Consensus       156 ----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~  207 (254)
T cd06627         156 ----------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA  207 (254)
T ss_pred             ----------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                                        0112467889999999887789999999999999999999999987765555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..++.... ..+.+..++..+.+++.+||..+|++||+    +.+++.||||
T Consensus       208 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~----~~~~l~~~~~  254 (254)
T cd06627         208 LFRIVQDD-HPPLPEGISPELKDFLMQCFQKDPNLRPT----AKQLLKHPWI  254 (254)
T ss_pred             HHHHhccC-CCCCCCCCCHHHHHHHHHHHhCChhhCcC----HHHHhcCCCC
Confidence            55544332 23344568899999999999999999999    9999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.90  E-value=1.4e-23  Score=173.32  Aligned_cols=135  Identities=24%  Similarity=0.417  Sum_probs=108.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       118 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  155 (255)
T cd08219         118 EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA------------------------------------------  155 (255)
T ss_pred             hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc------------------------------------------
Confidence            36899999999999999999999999998744321110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||++.+..++.++|+||+|+++|+|++|..||...+....
T Consensus       156 ---------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  208 (255)
T cd08219         156 ---------------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL  208 (255)
T ss_pred             ---------------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence                                       00013578899999999888899999999999999999999999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+..... .+.+..++..+.+||.+||+.||++||+    +.+++.-
T Consensus       209 ~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~----~~~il~~  252 (255)
T cd08219         209 ILKVCQGSY-KPLPSHYSYELRSLIKQMFKRNPRSRPS----ATTILSR  252 (255)
T ss_pred             HHHHhcCCC-CCCCcccCHHHHHHHHHHHhCCcccCCC----HHHHhhc
Confidence            665554433 2344568899999999999999999999    8887753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=2.7e-23  Score=173.85  Aligned_cols=141  Identities=28%  Similarity=0.393  Sum_probs=112.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++........                                          
T Consensus       119 ~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------  156 (277)
T cd06641         119 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI------------------------------------------  156 (277)
T ss_pred             cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh------------------------------------------
Confidence            36899999999999999999999999998754321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||.+.+..++.++|+||+||++++|++|..||........
T Consensus       157 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  209 (277)
T cd06641         157 ---------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV  209 (277)
T ss_pred             ---------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH
Confidence                                       00112467889999999887788999999999999999999999987665555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ...+... ........++.++.+++.+||+.+|.+||+    +.+++.||||...
T Consensus       210 ~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~l~~~~~~~~  259 (277)
T cd06641         210 LFLIPKN-NPPTLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFIVRF  259 (277)
T ss_pred             HHHHhcC-CCCCCCcccCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhhh
Confidence            5444332 222233467899999999999999999999    9999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.90  E-value=2.6e-23  Score=171.81  Aligned_cols=130  Identities=22%  Similarity=0.383  Sum_probs=102.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.......                                          
T Consensus       120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------  157 (256)
T cd05082         120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD------------------------------------------  157 (256)
T ss_pred             hCCEeccccchheEEEcCCCcEEecCCccceeccccCC------------------------------------------
Confidence            36899999999999999999999999998743221100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                    ...++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       158 ------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~  207 (256)
T cd05082         158 ------------------------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  207 (256)
T ss_pred             ------------------------------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                          0123457999999988889999999999999999997 999998776665


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+. ..........++..+.+++.+||+.+|++||+    +.+++
T Consensus       208 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~  250 (256)
T cd05082         208 VVPRVE-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPS----FLQLR  250 (256)
T ss_pred             HHHHHh-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence            555443 33333445578999999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.2e-23  Score=171.40  Aligned_cols=135  Identities=21%  Similarity=0.332  Sum_probs=104.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.+||+|||+++..........                                        
T Consensus       114 ~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~----------------------------------------  153 (257)
T cd05060         114 KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR----------------------------------------  153 (257)
T ss_pred             cCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc----------------------------------------
Confidence            5899999999999999999999999998754432110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|++++ |..||......+.
T Consensus       154 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~  207 (257)
T cd05060         154 --------------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV  207 (257)
T ss_pred             --------------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence                                      0000124567999999988889999999999999999998 9999988776555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+ ......+....++..+.+++.+||..+|++||+    +.+++
T Consensus       208 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~~l~  249 (257)
T cd05060         208 IAML-ESGERLPRPEECPQEIYSIMLSCWKYRPEDRPT----FSELE  249 (257)
T ss_pred             HHHH-HcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHH
Confidence            4444 344445566678999999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.90  E-value=4e-23  Score=173.14  Aligned_cols=132  Identities=15%  Similarity=0.243  Sum_probs=102.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       128 ~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  166 (279)
T cd05111         128 HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY-----------------------------------------  166 (279)
T ss_pred             CCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc-----------------------------------------
Confidence            689999999999999999999999999885432110000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|||++ |..||.+......
T Consensus       167 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~  220 (279)
T cd05111         167 --------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV  220 (279)
T ss_pred             --------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                      0001235678999999988889999999999999999998 9999988765443


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                       .+++......+....++..+.+++.+||..+|++||++.+
T Consensus       221 -~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~e  260 (279)
T cd05111         221 -PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKE  260 (279)
T ss_pred             -HHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence             3444544444555567889999999999999999999443

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=2.5e-23  Score=172.32  Aligned_cols=134  Identities=21%  Similarity=0.352  Sum_probs=105.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++||||||+||+++.++.++|+|||++.........                                         
T Consensus       121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  159 (261)
T cd05072         121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-----------------------------------------  159 (261)
T ss_pred             HCCeeccccchhhEEecCCCcEEECCCccceecCCCcee-----------------------------------------
Confidence            368999999999999999999999999988553221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       160 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         160 ---------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             ---------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence                                       0001135678999999988888999999999999999998 999998877766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+.. ....+....++.++.+|+.+||..+|++||+    +++++
T Consensus       213 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~  255 (261)
T cd05072         213 VMSALQR-GYRMPRMENCPDELYDIMKTCWKEKAEERPT----FDYLQ  255 (261)
T ss_pred             HHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence            6665543 3445555678999999999999999999999    55543

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=4e-23  Score=172.66  Aligned_cols=138  Identities=33%  Similarity=0.510  Sum_probs=106.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++........                                           
T Consensus       117 ~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-------------------------------------------  153 (282)
T cd07829         117 HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-------------------------------------------  153 (282)
T ss_pred             CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+. .++.++|||||||+++++++|..||.+......
T Consensus       154 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         154 --------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             --------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                                      00011356789999998876 689999999999999999999999988776655


Q ss_pred             HHHHHHhccC------------------CCC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALE------------------FPK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~------------------~p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +.++......                  ++.         ....+..+.+||.+||..+|++||+    +++++.||||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~p~~  282 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS----AKEALKHPYF  282 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC----HHHHhhCcCC
Confidence            5554432110                  000         1234678999999999999999999    9999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.89  E-value=3.7e-23  Score=173.14  Aligned_cols=139  Identities=32%  Similarity=0.494  Sum_probs=106.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++|+||||+||+++.++.++|+|||++.........                                          
T Consensus       119 ~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------  156 (287)
T cd07840         119 NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA------------------------------------------  156 (287)
T ss_pred             CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc------------------------------------------
Confidence            68999999999999999999999999987544322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||.+.+. .++.++|||||||++++|++|..||........
T Consensus       157 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~  210 (287)
T cd07840         157 --------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQ  210 (287)
T ss_pred             --------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                      00011356789999988764 478999999999999999999999988776655


Q ss_pred             HHHHHHhccCCC-----C-----------------------CCC-CChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFP-----K-----------------------EPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p-----~-----------------------~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+........     .                       ... ++..+.+++.+||..+|.+||+    +++++.|||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~----~~~~l~~~~  286 (287)
T cd07840         211 LEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS----ADQALQHEY  286 (287)
T ss_pred             HHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC----HHHHhhCcC
Confidence            555443211100     0                       011 3888999999999999999999    999999999


Q ss_pred             C
Q 025601          212 F  212 (250)
Q Consensus       212 ~  212 (250)
                      |
T Consensus       287 ~  287 (287)
T cd07840         287 F  287 (287)
T ss_pred             C
Confidence            7

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.89  E-value=4.3e-23  Score=174.93  Aligned_cols=136  Identities=18%  Similarity=0.302  Sum_probs=105.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       155 ~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----------------------------------------  194 (304)
T cd05101         155 SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----------------------------------------  194 (304)
T ss_pred             HCCeeecccccceEEEcCCCcEEECCCccceecccccccc----------------------------------------
Confidence            3699999999999999999999999999885543221100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 .+....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+
T Consensus       195 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  247 (304)
T cd05101         195 ---------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  247 (304)
T ss_pred             ---------------------------cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence                                       0001134568999999988889999999999999999998 888998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+. .......+..++..+.+|+.+||+.+|++||+    +.+++.
T Consensus       248 ~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~e~l~  291 (304)
T cd05101         248 LFKLLK-EGHRMDKPANCTNELYMMMRDCWHAIPSHRPT----FKQLVE  291 (304)
T ss_pred             HHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence            655543 33344445678999999999999999999999    555543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.89  E-value=2.5e-23  Score=171.05  Aligned_cols=140  Identities=32%  Similarity=0.525  Sum_probs=108.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++|+||+|+||+++.++.++|+|||.+.........                                          
T Consensus       120 ~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------------------------------------------  157 (260)
T cd06606         120 NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG------------------------------------------  157 (260)
T ss_pred             CCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc------------------------------------------
Confidence            68999999999999999999999999987544332110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-LT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-~~  160 (250)
                                               .......++..|+|||.+.+...+.++||||||+++++|++|..||...... ..
T Consensus       158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  212 (260)
T cd06606         158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA  212 (260)
T ss_pred             -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence                                     0001125778999999998888899999999999999999999999877622 22


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+.........+...+..+.+|+.+||+.+|++||+    +.+++.||||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~ll~~~~~  260 (260)
T cd06606         213 LYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT----ADELLQHPFL  260 (260)
T ss_pred             HHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCC----HHHHhhCCCC
Confidence            22222212222334467899999999999999999999    9999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.89  E-value=3.7e-23  Score=171.22  Aligned_cols=137  Identities=27%  Similarity=0.458  Sum_probs=108.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++. +.++|+|||++........                                          
T Consensus       124 ~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~------------------------------------------  160 (260)
T cd08222         124 QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD------------------------------------------  160 (260)
T ss_pred             HcCccccCCChhheEeec-CCEeecccCceeecCCCcc------------------------------------------
Confidence            368999999999999964 6799999998744322110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......++..|+|||.+.+..++.++|+||+|+++++|++|..||.+......
T Consensus       161 ---------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~  213 (260)
T cd08222         161 ---------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSV  213 (260)
T ss_pred             ---------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                                       00012467889999999888888999999999999999999999987776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ...+...... ..+..++.++.++|.+||+.+|++||+    +.+++.||||
T Consensus       214 ~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~~~~  260 (260)
T cd08222         214 VLRIVEGPTP-SLPETYSRQLNSIMQSMLNKDPSLRPS----AAEILRNPFI  260 (260)
T ss_pred             HHHHHcCCCC-CCcchhcHHHHHHHHHHhcCChhhCcC----HHHHhhCCCC
Confidence            6555443222 234467899999999999999999999    9999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.89  E-value=4.3e-23  Score=173.72  Aligned_cols=133  Identities=20%  Similarity=0.347  Sum_probs=103.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.........                                        
T Consensus       145 ~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  184 (290)
T cd05045         145 EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV----------------------------------------  184 (290)
T ss_pred             HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchh----------------------------------------
Confidence            3689999999999999999999999999875432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++++|++ |..||.+.....
T Consensus       185 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         185 ---------------------------KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             ---------------------------cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0001134568999999988889999999999999999998 999998877555


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ... .+......+.+..++..+.+|+.+||+.+|++||++.+
T Consensus       238 ~~~-~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~  278 (290)
T cd05045         238 LFN-LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFAD  278 (290)
T ss_pred             HHH-HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence            443 44444455556678999999999999999999999444

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.89  E-value=3.9e-23  Score=171.94  Aligned_cols=134  Identities=22%  Similarity=0.325  Sum_probs=104.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++++|||++.........                                         
T Consensus       125 ~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  163 (266)
T cd05064         125 EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY-----------------------------------------  163 (266)
T ss_pred             HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh-----------------------------------------
Confidence            368999999999999999999999999976332110000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|++++ |..||.+.....
T Consensus       164 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~  216 (266)
T cd05064         164 ---------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD  216 (266)
T ss_pred             ---------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                                       0001134578999999988889999999999999999875 999999888776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .+..+. .....+.+..++..+.+++.+||+.+|.+||+    +++++
T Consensus       217 ~~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~----~~~i~  259 (266)
T cd05064         217 VIKAVE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPR----FSQIH  259 (266)
T ss_pred             HHHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCC----HHHHH
Confidence            666554 33445566778999999999999999999999    55544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=3.4e-23  Score=171.49  Aligned_cols=134  Identities=25%  Similarity=0.373  Sum_probs=105.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++.........                                         
T Consensus       120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  158 (260)
T cd05070         120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-----------------------------------------  158 (260)
T ss_pred             HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-----------------------------------------
Confidence            368999999999999999999999999988543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|+||||+++|+|++ |..||.+....+
T Consensus       159 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  211 (260)
T cd05070         159 ---------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE  211 (260)
T ss_pred             ---------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0001134567999999988888999999999999999999 899998877776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+.. ....+.+...+..+.+|+.+||..+|++|||    +++++
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~l~  254 (260)
T cd05070         212 VLEQVER-GYRMPCPQDCPISLHELMLQCWKKDPEERPT----FEYLQ  254 (260)
T ss_pred             HHHHHHc-CCCCCCCCcCCHHHHHHHHHHcccCcccCcC----HHHHH
Confidence            6665543 4445556678999999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=1.7e-23  Score=166.48  Aligned_cols=147  Identities=30%  Similarity=0.424  Sum_probs=113.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ..|+|||+|+.|+||+.+|.+||+|||+++....+.....                                        
T Consensus       143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~k----------------------------------------  182 (376)
T KOG0669|consen  143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVK----------------------------------------  182 (376)
T ss_pred             hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCC----------------------------------------
Confidence            3589999999999999999999999999866554322110                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               .+-...+-|..|++||.+.|.. |+.+.|||..||++.||.+|.+.+.+.+...+
T Consensus       183 -------------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq  237 (376)
T KOG0669|consen  183 -------------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ  237 (376)
T ss_pred             -------------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH
Confidence                                     0111236789999999999855 89999999999999999999999999887766


Q ss_pred             HHHHHHhccCCCCC-----CC----------------------------CChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKE-----PA----------------------------VPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~-----~~----------------------------~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +.-|-...+.+..+     .+                            -.+++.+|+.+||..||.+|+.    +.++|
T Consensus       238 l~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~----ad~al  313 (376)
T KOG0669|consen  238 LHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRID----ADQAL  313 (376)
T ss_pred             HHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcc----hHhhh
Confidence            65554322221111     00                            1146789999999999999999    99999


Q ss_pred             cCCCCCCCCc
Q 025601          208 HHPFFQGVNW  217 (250)
Q Consensus       208 ~hp~~~~~~~  217 (250)
                      +|.||..-..
T Consensus       314 nh~~F~kdp~  323 (376)
T KOG0669|consen  314 NHDFFWKDPM  323 (376)
T ss_pred             chhhhhcCCc
Confidence            9999986544

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.89  E-value=4.6e-23  Score=170.83  Aligned_cols=134  Identities=24%  Similarity=0.365  Sum_probs=105.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       120 ~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  158 (260)
T cd05069         120 RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-----------------------------------------  158 (260)
T ss_pred             hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-----------------------------------------
Confidence            368999999999999999999999999988543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+....+
T Consensus       159 ---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  211 (260)
T cd05069         159 ---------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE  211 (260)
T ss_pred             ---------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                       0001135678999999988889999999999999999999 999999887776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...++.. ....+.....+..+.+|+.+||..+|++||+    +++++
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~  254 (260)
T cd05069         212 VLEQVER-GYRMPCPQGCPESLHELMKLCWKKDPDERPT----FEYIQ  254 (260)
T ss_pred             HHHHHHc-CCCCCCCcccCHHHHHHHHHHccCCcccCcC----HHHHH
Confidence            6665543 3444555678999999999999999999999    66554

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=3.9e-23  Score=170.88  Aligned_cols=134  Identities=20%  Similarity=0.360  Sum_probs=105.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       119 ~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  156 (256)
T cd05059         119 NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT------------------------------------------  156 (256)
T ss_pred             CCcccccccHhhEEECCCCcEEECCcccceeccccccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+....+.
T Consensus       157 --------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  210 (256)
T cd05059         157 --------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV  210 (256)
T ss_pred             --------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence                                      0000123457999999998889999999999999999998 8999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+. .....+.+..++.++.+++.+||..+|++||+    +.+++.
T Consensus       211 ~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~~l~  253 (256)
T cd05059         211 VESVS-AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPA----FKKLLS  253 (256)
T ss_pred             HHHHH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence            65544 34344555678999999999999999999999    777664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.89  E-value=2.1e-23  Score=175.75  Aligned_cols=135  Identities=21%  Similarity=0.320  Sum_probs=104.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~----------------------------------------  190 (293)
T cd05053         151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK----------------------------------------  190 (293)
T ss_pred             CCccccccceeeEEEcCCCeEEeCccccccccccccceec----------------------------------------
Confidence            6899999999999999999999999998865432110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       191 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  243 (293)
T cd05053         191 ---------------------------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL  243 (293)
T ss_pred             ---------------------------cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence                                       000123567999999988889999999999999999997 9999988776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+. .......+..++..+.+|+.+||..+|++|||    +.++++
T Consensus       244 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~eil~  286 (293)
T cd05053         244 FKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPT----FKQLVE  286 (293)
T ss_pred             HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcC----HHHHHH
Confidence            55443 33333445567899999999999999999999    666664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=4.4e-23  Score=173.51  Aligned_cols=140  Identities=31%  Similarity=0.451  Sum_probs=106.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++|+||+|+||+++.++.++|+|||++........                                           
T Consensus       124 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  160 (287)
T cd06621         124 RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA-------------------------------------------  160 (287)
T ss_pred             CCcccCCCCHHHEEEecCCeEEEeecccccccccccc-------------------------------------------
Confidence            6899999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-----  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-----  156 (250)
                                                  ....++..|+|||.+.+..++.++||||+||++|+|++|..||....     
T Consensus       161 ----------------------------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  212 (287)
T cd06621         161 ----------------------------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG  212 (287)
T ss_pred             ----------------------------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC
Confidence                                        01235678999999988889999999999999999999999997652     


Q ss_pred             hHHHHHHHHHhccC-CCC----CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          157 HELTLANIVARALE-FPK----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       157 ~~~~~~~i~~~~~~-~p~----~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+....+...... .+.    ....++.+.+||.+||+.+|++|||    +.+++.||||+...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~eil~~~~~~~~~  273 (287)
T cd06621         213 PIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT----PWDMLEHPWIKAQM  273 (287)
T ss_pred             hHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC----HHHHHhCccccccc
Confidence            22223222221111 111    1234578999999999999999999    99999999997643

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.89  E-value=5.4e-23  Score=170.77  Aligned_cols=134  Identities=26%  Similarity=0.384  Sum_probs=104.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       120 ~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-----------------------------------------  158 (262)
T cd05071         120 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-----------------------------------------  158 (262)
T ss_pred             HCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-----------------------------------------
Confidence            368999999999999999999999999987543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       159 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~  211 (262)
T cd05071         159 ---------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  211 (262)
T ss_pred             ---------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH
Confidence                                       0001135678999999988889999999999999999999 888998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+.. ....+....++..+.+|+.+||+.+|++||+    +.+++
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~----~~~~~  254 (262)
T cd05071         212 VLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQ  254 (262)
T ss_pred             HHHHHhc-CCCCCCccccCHHHHHHHHHHccCCcccCCC----HHHHH
Confidence            6655533 3344555678999999999999999999999    55543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.89  E-value=5.4e-23  Score=175.26  Aligned_cols=135  Identities=21%  Similarity=0.305  Sum_probs=104.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++..........                                       
T Consensus       152 ~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~---------------------------------------  192 (314)
T cd05099         152 SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK---------------------------------------  192 (314)
T ss_pred             HCCeeeccccceeEEEcCCCcEEEccccccccccccccccc---------------------------------------
Confidence            36999999999999999999999999999865432110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       193 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  244 (314)
T cd05099         193 ----------------------------TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE  244 (314)
T ss_pred             ----------------------------cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                        000023457999999988889999999999999999998 899998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+... ........++.++.+|+.+||..+|++||+    +.+++
T Consensus       245 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~ll  287 (314)
T cd05099         245 LFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPTQRPT----FKQLV  287 (314)
T ss_pred             HHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHH
Confidence            66555433 233344578899999999999999999999    55544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.89  E-value=7.2e-23  Score=169.17  Aligned_cols=135  Identities=21%  Similarity=0.304  Sum_probs=105.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++........                                         
T Consensus       118 ~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-----------------------------------------  156 (256)
T cd05114         118 RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-----------------------------------------  156 (256)
T ss_pred             HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-----------------------------------------
Confidence            368999999999999999999999999987543211100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|+||||+++|+|++ |+.||......+
T Consensus       157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         157 ---------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             ---------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                                       0001134568999999988889999999999999999999 999998887776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+..+.... ....+...+..+.+|+.+||..+|++||+    +++++.
T Consensus       210 ~~~~i~~~~-~~~~~~~~~~~~~~li~~c~~~~p~~Rps----~~~l~~  253 (256)
T cd05114         210 VVEMISRGF-RLYRPKLASMTVYEVMYSCWHEKPEGRPT----FAELLR  253 (256)
T ss_pred             HHHHHHCCC-CCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence            666665432 33334457889999999999999999999    777654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=4.4e-23  Score=173.86  Aligned_cols=136  Identities=23%  Similarity=0.295  Sum_probs=103.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++.........                                        
T Consensus       148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----------------------------------------  187 (296)
T cd05051         148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR----------------------------------------  187 (296)
T ss_pred             HcCccccccchhceeecCCCceEEccccceeecccCccee----------------------------------------
Confidence            3689999999999999999999999999875432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY--GVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt--g~~pf~~~~~~  158 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++  |..||......
T Consensus       188 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05051         188 ---------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ  240 (296)
T ss_pred             ---------------------------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence                                       0001235678999999988889999999999999999997  77889877766


Q ss_pred             HHHHHHHHh------ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 LTLANIVAR------ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 ~~~~~i~~~------~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ..+..+...      ....+.+..++.++.+|+.+||+.||++||+    +.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt----~~el~  291 (296)
T cd05051         241 QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT----FREIH  291 (296)
T ss_pred             HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC----HHHHH
Confidence            666555432      1122334457899999999999999999999    77764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.89  E-value=5.9e-23  Score=177.27  Aligned_cols=138  Identities=19%  Similarity=0.325  Sum_probs=105.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++..........                                        
T Consensus       197 ~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  236 (343)
T cd05103         197 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----------------------------------------  236 (343)
T ss_pred             hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchh----------------------------------------
Confidence            4699999999999999999999999999885432111000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       237 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  289 (343)
T cd05103         237 ---------------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  289 (343)
T ss_pred             ---------------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH
Confidence                                       0001134567999999988889999999999999999996 999998765444


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .....+......+.+..++..+.+++..||+.+|++||+    +.++++|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps----~~eil~~  335 (343)
T cd05103         290 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  335 (343)
T ss_pred             HHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            444444444444444557889999999999999999999    7776654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.89  E-value=6.7e-23  Score=169.62  Aligned_cols=131  Identities=25%  Similarity=0.390  Sum_probs=104.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.+||+|||++.........                                         
T Consensus       122 ~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~-----------------------------------------  160 (261)
T cd05148         122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL-----------------------------------------  160 (261)
T ss_pred             HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc-----------------------------------------
Confidence            368999999999999999999999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||++.+..++.++||||||+++++|++ |..||.+....+
T Consensus       161 ----------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~  212 (261)
T cd05148         161 ----------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE  212 (261)
T ss_pred             ----------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence                                        001134567999999988888999999999999999998 899998887777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .+..+.. ....+.+..++..+.+++.+||+.||.+|||+.+
T Consensus       213 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~  253 (261)
T cd05148         213 VYDQITA-GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKA  253 (261)
T ss_pred             HHHHHHh-CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            7766654 3444556678999999999999999999999444

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=6.2e-23  Score=169.82  Aligned_cols=136  Identities=18%  Similarity=0.298  Sum_probs=107.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.+||+|||+++........                                         
T Consensus       118 ~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-----------------------------------------  156 (256)
T cd05113         118 SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-----------------------------------------  156 (256)
T ss_pred             hCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-----------------------------------------
Confidence            368999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       157 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         157 ---------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             ---------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                                       0001135578999999988889999999999999999998 999998877766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ....+..... ...+...+..+.+++.+||+.+|.+||+    +.+++.+
T Consensus       210 ~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~ll~~  254 (256)
T cd05113         210 TVEKVSQGLR-LYRPHLASEKVYAIMYSCWHEKAEERPT----FQQLLSS  254 (256)
T ss_pred             HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHHh
Confidence            6666655433 3344567899999999999999999999    8887753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.89  E-value=5.6e-23  Score=171.30  Aligned_cols=130  Identities=21%  Similarity=0.265  Sum_probs=100.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.......                                           
T Consensus       130 ~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~-------------------------------------------  166 (270)
T cd05047         130 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-------------------------------------------  166 (270)
T ss_pred             HCCEeecccccceEEEcCCCeEEECCCCCccccchhh-------------------------------------------
Confidence            3689999999999999999999999999873211000                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 .......+..|+|||++.+..++.++|||||||++++|++ |..||.+.+...
T Consensus       167 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  219 (270)
T cd05047         167 ---------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  219 (270)
T ss_pred             ---------------------------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH
Confidence                                       0000123467999999988889999999999999999997 999998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ....+.. .........++.++.+|+.+||..+|.+||++.+
T Consensus       220 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  260 (270)
T cd05047         220 LYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQ  260 (270)
T ss_pred             HHHHHhC-CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHH
Confidence            5555433 3333444567899999999999999999999443

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.89  E-value=4.8e-23  Score=181.21  Aligned_cols=135  Identities=24%  Similarity=0.353  Sum_probs=106.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       256 ~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------------------------------  293 (400)
T cd05105         256 KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------------------------------  293 (400)
T ss_pred             CCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......++..|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       294 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~  348 (400)
T cd05105         294 -------------------------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST  348 (400)
T ss_pred             -------------------------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence                                     00011246678999999988889999999999999999997 9999987665555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                      +...+......+.+..++..+.+++.+||+.+|++||++.+.+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~  391 (400)
T cd05105         349 FYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS  391 (400)
T ss_pred             HHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence            5555555555666677899999999999999999999955533

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.89  E-value=4.7e-24  Score=192.46  Aligned_cols=142  Identities=35%  Similarity=0.526  Sum_probs=108.3

Q ss_pred             CccceeecCCCCcEEeCC---CC--CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            1 MLGIVYRDLKPENVLVRS---DG--HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~---~~--~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      ++|||||||||.||||..   ++  .++|+|||+++++..-...-.                                  
T Consensus       624 sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~----------------------------------  669 (903)
T KOG1027|consen  624 SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFS----------------------------------  669 (903)
T ss_pred             hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhh----------------------------------
Confidence            368999999999999985   33  589999999988764332111                                  


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhC-CCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG-VTPFRG  154 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg-~~pf~~  154 (250)
                                                      +.....||-+|+|||++....-+.++||+|+||++|+.++| .+||-.
T Consensus       670 --------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd  717 (903)
T KOG1027|consen  670 --------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD  717 (903)
T ss_pred             --------------------------------cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence                                            01123589999999999998888899999999999999876 899954


Q ss_pred             CChHHHHHHHHHhccCCCCCCCCC-hHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          155 VDHELTLANIVARALEFPKEPAVP-ATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       155 ~~~~~~~~~i~~~~~~~p~~~~~~-~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                        ..+...+|+.+....-...... .++.+||.+||.++|..||+    |.++|.||+|=.
T Consensus       718 --~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs----a~~VL~HPlFW~  772 (903)
T KOG1027|consen  718 --SLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS----ATDVLNHPLFWD  772 (903)
T ss_pred             --hHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC----HHHHhCCCccCC
Confidence              3334456666544322211111 18999999999999999999    999999999954

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=5.9e-23  Score=172.20  Aligned_cols=137  Identities=18%  Similarity=0.268  Sum_probs=99.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++...........                                      
T Consensus       125 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~--------------------------------------  166 (283)
T cd05080         125 SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV--------------------------------------  166 (283)
T ss_pred             HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhcc--------------------------------------
Confidence            368999999999999999999999999987544321100000                                      


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                                  .....++..|+|||++.+..++.++|||||||++++|++|..||......  
T Consensus       167 ----------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~  218 (283)
T cd05080         167 ----------------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE  218 (283)
T ss_pred             ----------------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh
Confidence                                        00012456799999998888899999999999999999999998543211  


Q ss_pred             ------------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 ------------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 ------------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                                  ..+..++......+.+..++.++.+|+..||+.+|++||+    +++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps----~~~i~  275 (283)
T cd05080         219 EMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPT----FRSLI  275 (283)
T ss_pred             hhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCC----HHHHH
Confidence                        1122222333334445678899999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=7.8e-23  Score=169.89  Aligned_cols=136  Identities=24%  Similarity=0.362  Sum_probs=106.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||+++.........                                        
T Consensus       124 ~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~----------------------------------------  163 (266)
T cd05033         124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY----------------------------------------  163 (266)
T ss_pred             hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce----------------------------------------
Confidence            3689999999999999999999999999986553111000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       164 ---------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~  216 (266)
T cd05033         164 ---------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD  216 (266)
T ss_pred             ---------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH
Confidence                                       0001124578999999988889999999999999999997 999998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+.. ....+.+..++..+.+|+.+||+.+|++||+    ++++++
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~----~~ei~~  260 (266)
T cd05033         217 VIKAVED-GYRLPPPMDCPSALYQLMLDCWQKDRNERPT----FSQIVS  260 (266)
T ss_pred             HHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence            6655543 3344556678999999999999999999999    666554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=9.9e-23  Score=167.87  Aligned_cols=135  Identities=24%  Similarity=0.382  Sum_probs=102.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.+||+|||++.........    .                                    
T Consensus       112 ~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~----~------------------------------------  151 (252)
T cd05084         112 SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA----S------------------------------------  151 (252)
T ss_pred             hCCccccccchheEEEcCCCcEEECccccCccccccccc----c------------------------------------
Confidence            368999999999999999999999999987432210000    0                                    


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 .......+..|+|||.+.+..++.++|||||||++|++++ |..||.......
T Consensus       152 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~  204 (252)
T cd05084         152 ---------------------------TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ  204 (252)
T ss_pred             ---------------------------cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH
Confidence                                       0000012456999999988889999999999999999997 889998776655


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+ ......+.+..++..+.+|+.+||+.+|++||+    +.+++
T Consensus       205 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~~  247 (252)
T cd05084         205 TREAI-EQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS----FSTVH  247 (252)
T ss_pred             HHHHH-HcCCCCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            44444 334444556678999999999999999999999    66654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.89  E-value=3.6e-23  Score=175.53  Aligned_cols=134  Identities=21%  Similarity=0.259  Sum_probs=102.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++......                                           
T Consensus       142 ~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-------------------------------------------  178 (303)
T cd05088         142 QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-------------------------------------------  178 (303)
T ss_pred             hCCccccccchheEEecCCCcEEeCccccCcccchhh-------------------------------------------
Confidence            3699999999999999999999999999874211000                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       179 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  231 (303)
T cd05088         179 ---------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  231 (303)
T ss_pred             ---------------------------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH
Confidence                                       0000123567999999988878999999999999999998 999998877665


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ....+. ..........++..+.+|+.+||+.+|++||+    +++++.+
T Consensus       232 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~il~~  276 (303)
T cd05088         232 LYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS  276 (303)
T ss_pred             HHHHHh-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence            555443 22233344467899999999999999999999    6666553

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.89  E-value=2.9e-23  Score=193.57  Aligned_cols=154  Identities=29%  Similarity=0.443  Sum_probs=104.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.|||||||||.|||++.++.+||+|||++...............   .                               
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~---~-------------------------------  760 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLS---F-------------------------------  760 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccC---c-------------------------------
Confidence            368999999999999999999999999999653221111000000   0                               


Q ss_pred             ccCccccccccCCCCCCCCcccccc-ccccCCcccCCCCCCCceecCCC---CCchhHHHHHHHHHHHHHhCCCCCCCC-
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPV-DVRSMSFVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRGV-  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~vl~elltg~~pf~~~-  155 (250)
                                        .-..... +....+.+||.-|+|||++.+..   |+.++|+||||+|++||+.   ||... 
T Consensus       761 ------------------~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM  819 (1351)
T KOG1035|consen  761 ------------------STNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM  819 (1351)
T ss_pred             ------------------cccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH
Confidence                              0000000 11223568999999999998754   9999999999999999975   46432 


Q ss_pred             ChHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          156 DHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      ..-..+.++-++..+.+..  ...-+.-..+|++||+.||++|||    |.+||++.||.
T Consensus       820 ERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPt----A~eLL~s~llp  875 (1351)
T KOG1035|consen  820 ERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPT----ATELLNSELLP  875 (1351)
T ss_pred             HHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCC----HHHHhhccCCC
Confidence            2333444444333333310  112244568999999999999999    99999999998

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.89  E-value=6.9e-23  Score=170.40  Aligned_cols=132  Identities=30%  Similarity=0.429  Sum_probs=105.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++.......                                            
T Consensus       133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------  168 (269)
T cd08528         133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--------------------------------------------  168 (269)
T ss_pred             CceeecCCCHHHEEECCCCcEEEecccceeeccccc--------------------------------------------
Confidence            579999999999999999999999999885432211                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|++||++.+..++.++|+||||+++|+|++|..||.........
T Consensus       169 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~  222 (269)
T cd08528         169 --------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA  222 (269)
T ss_pred             --------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH
Confidence                                      000125778899999999888999999999999999999999999877766666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                      ..+............++..+.+||.+||+.||++||++.+.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~  264 (269)
T cd08528         223 TKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVS  264 (269)
T ss_pred             HHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHH
Confidence            666555444333336789999999999999999999944433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.89  E-value=1.1e-22  Score=169.19  Aligned_cols=133  Identities=24%  Similarity=0.375  Sum_probs=103.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++...........                                        
T Consensus       126 ~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~----------------------------------------  165 (268)
T cd05063         126 MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY----------------------------------------  165 (268)
T ss_pred             CCeeccccchhhEEEcCCCcEEECCCccceecccccccce----------------------------------------
Confidence            6899999999999999999999999998754332110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .......+..|+|||++.+..++.++|||||||++|++++ |..||........
T Consensus       166 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~  219 (268)
T cd05063         166 --------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEV  219 (268)
T ss_pred             --------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHH
Confidence                                      0000123457999999988888999999999999999997 9999988777666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+.. ....+....++..+.+|+.+||+.+|++||++.+
T Consensus       220 ~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~  259 (268)
T cd05063         220 MKAIND-GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVD  259 (268)
T ss_pred             HHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence            655543 4455666678999999999999999999999433

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.89  E-value=8.3e-23  Score=170.96  Aligned_cols=132  Identities=20%  Similarity=0.303  Sum_probs=102.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.+........                                        
T Consensus       136 ~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~----------------------------------------  175 (280)
T cd05043         136 RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCL----------------------------------------  175 (280)
T ss_pred             CCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEe----------------------------------------
Confidence            6899999999999999999999999999865432210000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....++..|+|||++.+..++.++|||||||++|++++ |..||......+.
T Consensus       176 ---------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  228 (280)
T cd05043         176 ---------------------------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEM  228 (280)
T ss_pred             ---------------------------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHH
Confidence                                       001134567999999988889999999999999999998 9999987765554


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .. .+......+....++.++.+++.+||..+|++||++.+
T Consensus       229 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  268 (280)
T cd05043         229 AA-YLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQ  268 (280)
T ss_pred             HH-HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHH
Confidence            43 33444444455567999999999999999999999443

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.89  E-value=8.6e-23  Score=173.41  Aligned_cols=135  Identities=21%  Similarity=0.295  Sum_probs=102.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++..........                                        
T Consensus       158 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~----------------------------------------  197 (307)
T cd05098         158 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----------------------------------------  197 (307)
T ss_pred             HCCcccccccHHheEEcCCCcEEECCCcccccccccchhh----------------------------------------
Confidence            3689999999999999999999999999875432110000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+
T Consensus       198 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~  250 (307)
T cd05098         198 ---------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  250 (307)
T ss_pred             ---------------------------ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence                                       0000123467999999998889999999999999999998 889998766555


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                      ....+ ........+..++.++.+|+.+||+.+|++||++.+.+
T Consensus       251 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl  293 (307)
T cd05098         251 LFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV  293 (307)
T ss_pred             HHHHH-HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence            44443 44444445567899999999999999999999944433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.89  E-value=1.1e-22  Score=168.35  Aligned_cols=134  Identities=22%  Similarity=0.370  Sum_probs=105.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++.........                                         
T Consensus       120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-----------------------------------------  158 (260)
T cd05067         120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT-----------------------------------------  158 (260)
T ss_pred             cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-----------------------------------------
Confidence            368999999999999999999999999987443211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++||||||+++|++++ |..||.+.+...
T Consensus       159 ---------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  211 (260)
T cd05067         159 ---------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE  211 (260)
T ss_pred             ---------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH
Confidence                                       0001235678999999988888999999999999999998 999999887666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+ ......+....++.++.+++.+||..+|++||+    +++++
T Consensus       212 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~  254 (260)
T cd05067         212 VIQNL-ERGYRMPRPDNCPEELYELMRLCWKEKPEERPT----FEYLR  254 (260)
T ss_pred             HHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHH
Confidence            65554 334444556678899999999999999999999    66654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.89  E-value=1.4e-22  Score=171.92  Aligned_cols=135  Identities=21%  Similarity=0.345  Sum_probs=103.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       127 ~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------  166 (303)
T cd05110         127 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY----------------------------------------  166 (303)
T ss_pred             hcCeeccccccceeeecCCCceEEccccccccccCccccc----------------------------------------
Confidence            3689999999999999999999999999885432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       167 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~  219 (303)
T cd05110         167 ---------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE  219 (303)
T ss_pred             ---------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                       0001134678999999988889999999999999999997 899998765443


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                       ...++......+....++..+.+++.+||..+|++||++.+.+
T Consensus       220 -~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~  262 (303)
T cd05110         220 -IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELA  262 (303)
T ss_pred             -HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence             3444555545555567889999999999999999999944433

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.88  E-value=2.1e-23  Score=162.99  Aligned_cols=97  Identities=21%  Similarity=0.245  Sum_probs=74.9

Q ss_pred             ccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhccCC-----CCCCCCCh--HHHHH
Q 025601          113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-LTLANIVARALEF-----PKEPAVPA--TAKDL  184 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-~~~~~i~~~~~~~-----p~~~~~~~--~~~~l  184 (250)
                      .||+.|+|||++.+..++.++|||||||++|||++|..||...... ..+..+.......     +....++.  ++.+|
T Consensus        65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (176)
T smart00750       65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF  144 (176)
T ss_pred             CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence            4789999999999999999999999999999999999999765432 2333333322221     11112333  68999


Q ss_pred             HHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          185 ISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       185 l~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      |.+||..+|++||+    +.+++.|+|+.
T Consensus       145 i~~cl~~~p~~Rp~----~~~ll~~~~~~  169 (176)
T smart00750      145 MRVCASRLPQRREA----ANHYLAHCRAL  169 (176)
T ss_pred             HHHHHhcccccccC----HHHHHHHHHHH
Confidence            99999999999999    99999999865

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.88  E-value=1.2e-22  Score=168.65  Aligned_cols=135  Identities=25%  Similarity=0.431  Sum_probs=101.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       124 ~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~-----------------------------------------  162 (267)
T cd08228         124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-----------------------------------------  162 (267)
T ss_pred             hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH-----------------------------------------
Confidence            469999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-EL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~-~~  159 (250)
                                                  .....++..|+|||++.+..++.++|+||+|+++|+|++|..||..... ..
T Consensus       163 ----------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~  214 (267)
T cd08228         163 ----------------------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLF  214 (267)
T ss_pred             ----------------------------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHH
Confidence                                        0012477889999999888889999999999999999999999965432 22


Q ss_pred             HHHHHHHhccCCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+.+.+......+. ...++..+.+||.+||..+|++||+    +++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~----~~~vl~  260 (267)
T cd08228         215 SLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPD----IGYVHQ  260 (267)
T ss_pred             HHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcC----HHHHHH
Confidence            23333332222222 2357888999999999999999999    666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.4e-22  Score=166.81  Aligned_cols=135  Identities=27%  Similarity=0.381  Sum_probs=103.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||+++.........                                         
T Consensus       112 ~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-----------------------------------------  150 (251)
T cd05041         112 KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV-----------------------------------------  150 (251)
T ss_pred             CCEehhhcCcceEEEcCCCcEEEeeccccccccCCccee-----------------------------------------
Confidence            589999999999999999999999999875432110000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .......+..|+|||.+.+..++.++|+|||||++|+|++ |..||.+......
T Consensus       151 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~  204 (251)
T cd05041         151 --------------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT  204 (251)
T ss_pred             --------------------------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH
Confidence                                      0000123467999999988889999999999999999998 8899987775554


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+ ......+.+..++.++.+|+.+||..+|++||+    +.+++.
T Consensus       205 ~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~ell~  247 (251)
T cd05041         205 RERI-ESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPS----FSEIYN  247 (251)
T ss_pred             HHHH-hcCCCCCCCccCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence            4444 333344455678999999999999999999999    887764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.88  E-value=1.4e-22  Score=171.16  Aligned_cols=134  Identities=21%  Similarity=0.290  Sum_probs=100.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++..........                                        
T Consensus       148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----------------------------------------  187 (296)
T cd05095         148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYR----------------------------------------  187 (296)
T ss_pred             HCCeecccCChheEEEcCCCCEEeccCcccccccCCccee----------------------------------------
Confidence            3689999999999999999999999999875432211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY--GVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt--g~~pf~~~~~~  158 (250)
                                                 ......++..|++||+..+..++.++|||||||++|||++  |..||...+..
T Consensus       188 ---------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~  240 (296)
T cd05095         188 ---------------------------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE  240 (296)
T ss_pred             ---------------------------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence                                       0001124568999999888889999999999999999998  77899877655


Q ss_pred             HHHHHHHH------hccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          159 LTLANIVA------RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       159 ~~~~~i~~------~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      +.......      .....+.+..++..+.+|+..||+.||++||++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~  289 (296)
T cd05095         241 QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQE  289 (296)
T ss_pred             HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            54443221      11223445568899999999999999999999444

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.88  E-value=1.3e-22  Score=174.30  Aligned_cols=136  Identities=20%  Similarity=0.316  Sum_probs=104.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       153 ~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~-----------------------------------------  191 (334)
T cd05100         153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK-----------------------------------------  191 (334)
T ss_pred             CCeeccccccceEEEcCCCcEEECCcccceecccccccc-----------------------------------------
Confidence            689999999999999999999999999875432211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus       192 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  245 (334)
T cd05100         192 --------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL  245 (334)
T ss_pred             --------------------------cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence                                      0000123467999999998889999999999999999998 8899988776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+. .....+.+..++.++.+|+.+||+.+|++||+    +.+++.+
T Consensus       246 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~ell~~  289 (334)
T cd05100         246 FKLLK-EGHRMDKPANCTHELYMIMRECWHAVPSQRPT----FKQLVED  289 (334)
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHHHH
Confidence            55543 33344455678899999999999999999999    5555543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.88  E-value=2.1e-22  Score=165.62  Aligned_cols=131  Identities=24%  Similarity=0.372  Sum_probs=100.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|++|+||||+||+++.++.++|+|||++.........                                          
T Consensus       112 ~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------  149 (250)
T cd05085         112 KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS------------------------------------------  149 (250)
T ss_pred             CCeeecccChheEEEcCCCeEEECCCccceeccccccc------------------------------------------
Confidence            68999999999999999999999999987432111000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++||||||+++|++++ |..||.+......
T Consensus       150 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~  203 (250)
T cd05085         150 --------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA  203 (250)
T ss_pred             --------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence                                      0000123467999999988888999999999999999998 9999988776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+. ..........++..+.+|+.+||..+|++||++.+
T Consensus       204 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  243 (250)
T cd05085         204 REQVE-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSE  243 (250)
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence            55543 33333444568899999999999999999999433

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.88  E-value=1.3e-22  Score=170.61  Aligned_cols=134  Identities=23%  Similarity=0.329  Sum_probs=103.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||++..........                                         
T Consensus       149 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------------------  187 (288)
T cd05050         149 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-----------------------------------------  187 (288)
T ss_pred             CCeecccccHhheEecCCCceEECccccceecccCcccc-----------------------------------------
Confidence            689999999999999999999999999874332111000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .......+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       188 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~  241 (288)
T cd05050         188 --------------------------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV  241 (288)
T ss_pred             --------------------------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0000123567999999988889999999999999999997 8889988877776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.... ..+.+..++.++.+|+.+||+.+|++||+    +++++
T Consensus       242 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~el~  283 (288)
T cd05050         242 IYYVRDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPS----FASIN  283 (288)
T ss_pred             HHHHhcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence            66655433 23445578899999999999999999999    55544

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.88  E-value=1.6e-22  Score=166.98  Aligned_cols=129  Identities=22%  Similarity=0.387  Sum_probs=102.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|++||||||+||+++.++.++|+|||++.......                                            
T Consensus       119 ~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------  154 (254)
T cd05083         119 KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--------------------------------------------  154 (254)
T ss_pred             CCeeccccCcceEEEcCCCcEEECCCccceeccccC--------------------------------------------
Confidence            689999999999999999999999999874321100                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                  .....+..|+|||++.+..++.++|+|||||++|+|++ |..||.+....+.
T Consensus       155 ----------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  206 (254)
T cd05083         155 ----------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV  206 (254)
T ss_pred             ----------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence                                        00123467999999988889999999999999999997 9999988876665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+ .....+.....++..+.+|+.+||+.+|+.||+    +.+++
T Consensus       207 ~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~  248 (254)
T cd05083         207 KECV-EKGYRMEPPEGCPADVYVLMTSCWETEPKKRPS----FHKLR  248 (254)
T ss_pred             HHHH-hCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            5544 334444445678999999999999999999999    55544

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=2.2e-22  Score=166.49  Aligned_cols=133  Identities=26%  Similarity=0.398  Sum_probs=105.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++..........                                         
T Consensus       122 ~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-----------------------------------------  160 (261)
T cd05034         122 RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA-----------------------------------------  160 (261)
T ss_pred             CCcccCCcchheEEEcCCCCEEECccccceeccchhhhh-----------------------------------------
Confidence            689999999999999999999999999875543210000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 ......+..|+|||.+.+..++.++|+||+||++++|++ |+.||.+......
T Consensus       161 ---------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  213 (261)
T cd05034         161 ---------------------------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV  213 (261)
T ss_pred             ---------------------------hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                       001124567999999998889999999999999999998 9999998887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +..+.. ....+.+..++..+.+++.+||..+|++||+    +++++
T Consensus       214 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~l~  255 (261)
T cd05034         214 LEQVER-GYRMPRPPNCPEELYDLMLQCWDKDPEERPT----FEYLQ  255 (261)
T ss_pred             HHHHHc-CCCCCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHH
Confidence            666543 3444555677999999999999999999999    66654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.88  E-value=1.4e-22  Score=168.20  Aligned_cols=130  Identities=26%  Similarity=0.410  Sum_probs=97.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.++|+|||++........                                           
T Consensus       125 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  161 (267)
T cd08229         125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------  161 (267)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc-------------------------------------------
Confidence            6899999999999999999999999998744321110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--L  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--~  159 (250)
                                                ......++..|+|||++.+..++.++|+||||+++|+|++|..||.+....  .
T Consensus       162 --------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  215 (267)
T cd08229         162 --------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS  215 (267)
T ss_pred             --------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH
Confidence                                      000135778999999998888999999999999999999999999765432  2


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      ....+............++..+.+++.+||..+|++|||+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~  256 (267)
T cd08229         216 LCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDIT  256 (267)
T ss_pred             HhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHH
Confidence            22222222212112235788999999999999999999943

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=7.3e-23  Score=167.67  Aligned_cols=101  Identities=35%  Similarity=0.642  Sum_probs=87.1

Q ss_pred             ccCCCCCCCceec---CC--CCCchhHHHHHHHHHHHHHhCCCCCCCCC---------------hHHHHHHHHHhccCCC
Q 025601          113 VGTHEYLAPEIVS---GE--GHGSPVDWWTLGIFLFELFYGVTPFRGVD---------------HELTLANIVARALEFP  172 (250)
Q Consensus       113 ~gt~~y~aPE~~~---~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~---------------~~~~~~~i~~~~~~~p  172 (250)
                      +|+.-|||||+.-   +.  -|+.+.|.||||+|+|-|++|..||.|+-               .+..++.|-++.+.||
T Consensus       247 vGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFP  326 (463)
T KOG0607|consen  247 VGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP  326 (463)
T ss_pred             ccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCC
Confidence            6888999999763   32  27999999999999999999999998763               4457777888888888


Q ss_pred             CC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          173 KE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       173 ~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ..  ..++.+.++++..+|..|+..|.+    |.++++|||+..+.-
T Consensus       327 dkdWahIS~eakdlisnLlvrda~~rls----a~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  327 DKDWAHISSEAKDLISNLLVRDAKQRLS----AAQVLNHPWVQRCAP  369 (463)
T ss_pred             hhhhHHhhHHHHHHHHHHHhccHHhhhh----hhhccCCccccccch
Confidence            76  358999999999999999999999    999999999998753

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=2.4e-22  Score=167.27  Aligned_cols=135  Identities=29%  Similarity=0.458  Sum_probs=105.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++|+||||+||+++.++.++|+|||+++........                                         
T Consensus       125 ~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----------------------------------------  163 (270)
T cd05056         125 SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY-----------------------------------------  163 (270)
T ss_pred             hCCeeccccChheEEEecCCCeEEccCceeeecccccce-----------------------------------------
Confidence            368999999999999999999999999987543321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||.+.+..++.++|||||||+++++++ |..||.+....+
T Consensus       164 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  216 (270)
T cd05056         164 ---------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND  216 (270)
T ss_pred             ---------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence                                       0000123467999999988889999999999999999986 999999888776


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+.. ....+.+..++..+.+||.+||..+|++||+    +.+++.
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt----~~~~~~  260 (270)
T cd05056         217 VIGRIEN-GERLPMPPNCPPTLYSLMTKCWAYDPSKRPR----FTELKA  260 (270)
T ss_pred             HHHHHHc-CCcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            6655543 3344555678999999999999999999999    666543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.1e-22  Score=190.26  Aligned_cols=135  Identities=22%  Similarity=0.329  Sum_probs=111.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +++|||||..+|+|++....+||+|||||+.+.....-+...                                      
T Consensus       821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~--------------------------------------  862 (1025)
T KOG1095|consen  821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHG--------------------------------------  862 (1025)
T ss_pred             CCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccC--------------------------------------
Confidence            679999999999999999999999999997433221110000                                      


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .   -.-...|||||.+....++.++||||||+++||+++ |..||.+..+.++
T Consensus       863 --------------------------~---a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v  913 (1025)
T KOG1095|consen  863 --------------------------E---AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV  913 (1025)
T ss_pred             --------------------------c---cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence                                      0   012358999999999889999999999999999996 8899999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS  204 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~  204 (250)
                      +...+.+. +.+.+..||..+.++|..||+-+|++||+|...++
T Consensus       914 ~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  914 LLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            87666555 88999999999999999999999999999666544

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.88  E-value=2e-22  Score=168.15  Aligned_cols=136  Identities=27%  Similarity=0.431  Sum_probs=108.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++++|||+++........                                         
T Consensus       135 ~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-----------------------------------------  173 (275)
T cd05046         135 NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-----------------------------------------  173 (275)
T ss_pred             hcCcccCcCccceEEEeCCCcEEEcccccccccCccccc-----------------------------------------
Confidence            368999999999999999999999999987432211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus       174 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~  226 (275)
T cd05046         174 ---------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE  226 (275)
T ss_pred             ---------------------------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH
Confidence                                       0001235677999999988888899999999999999998 889998877777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+..+.......+....++..+.+++.+||+.+|++||+    +.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~----~~~~l~  271 (275)
T cd05046         227 VLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPS----FSELVS  271 (275)
T ss_pred             HHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCC----HHHHHH
Confidence            776666555555556678999999999999999999999    877765

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.88  E-value=2.4e-22  Score=167.07  Aligned_cols=135  Identities=21%  Similarity=0.392  Sum_probs=103.6

Q ss_pred             CccceeecCCCCcEEeCCCC-----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSDG-----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      +.||+|+||||+||+++.++     .++|+|||++..........                                   
T Consensus       124 ~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------------  168 (269)
T cd05044         124 QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR-----------------------------------  168 (269)
T ss_pred             hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccc-----------------------------------
Confidence            36899999999999999877     89999999885432211000                                   


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRG  154 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~  154 (250)
                                                      ......++..|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus       169 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~  216 (269)
T cd05044         169 --------------------------------KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA  216 (269)
T ss_pred             --------------------------------cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence                                            0001134678999999998889999999999999999998 9999987


Q ss_pred             CChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          155 VDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       155 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+....+. ....+.....++..+.+||.+||..+|++||+    +.+++
T Consensus       217 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~  264 (269)
T cd05044         217 LNNQEVLQHVT-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPT----FDRIQ  264 (269)
T ss_pred             cCHHHHHHHHh-cCCccCCcccchHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence            77666555443 33344445678999999999999999999999    55544

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=3e-22  Score=169.09  Aligned_cols=134  Identities=23%  Similarity=0.300  Sum_probs=99.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.+||+|||++.........                                         
T Consensus       147 ~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  185 (295)
T cd05097         147 SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY-----------------------------------------  185 (295)
T ss_pred             hcCeeccccChhhEEEcCCCcEEecccccccccccCcce-----------------------------------------
Confidence            368999999999999999999999999987543211100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY--GVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt--g~~pf~~~~~~  158 (250)
                                                .......++..|+|||++.+..++.++|||||||++++|++  |..||......
T Consensus       186 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~  239 (295)
T cd05097         186 --------------------------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE  239 (295)
T ss_pred             --------------------------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence                                      00001134678999999988889999999999999999987  67788877665


Q ss_pred             HHHHHHHH------hccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          159 LTLANIVA------RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       159 ~~~~~i~~------~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .....+..      ..........++..+.+|+.+||+.+|++||++.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~  288 (295)
T cd05097         240 QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK  288 (295)
T ss_pred             HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence            55444322      11112234457899999999999999999999444

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.88  E-value=2.6e-22  Score=165.67  Aligned_cols=134  Identities=23%  Similarity=0.366  Sum_probs=104.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||||+||+++.++.++|+|||++.........                                          
T Consensus       119 ~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------  156 (256)
T cd05112         119 SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT------------------------------------------  156 (256)
T ss_pred             CCccccccccceEEEcCCCeEEECCCcceeecccCccc------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++||||+|+++|+|++ |..||........
T Consensus       157 --------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  210 (256)
T cd05112         157 --------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV  210 (256)
T ss_pred             --------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence                                      0001134568999999988889999999999999999998 9999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.+. .....+...+..+.+|+.+||+.+|++||+    +.++++
T Consensus       211 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~----~~~~l~  253 (256)
T cd05112         211 VETINAG-FRLYKPRLASQSVYELMQHCWKERPEDRPS----FSLLLH  253 (256)
T ss_pred             HHHHhCC-CCCCCCCCCCHHHHHHHHHHcccChhhCCC----HHHHHH
Confidence            6555433 232334457899999999999999999999    777664

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=2.3e-22  Score=167.30  Aligned_cols=134  Identities=25%  Similarity=0.362  Sum_probs=104.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++...........                                        
T Consensus       125 ~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~----------------------------------------  164 (267)
T cd05066         125 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY----------------------------------------  164 (267)
T ss_pred             CCEeehhhchhcEEECCCCeEEeCCCCcccccccccceee----------------------------------------
Confidence            6899999999999999999999999998865432110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|+|||||++|++++ |..||.+....+.
T Consensus       165 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~  218 (267)
T cd05066         165 --------------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV  218 (267)
T ss_pred             --------------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH
Confidence                                      0001123567999999998889999999999999999886 9999988776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      ...+.+ ....+....++..+.+++.+||+.+|++||++.+.
T Consensus       219 ~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i  259 (267)
T cd05066         219 IKAIEE-GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQI  259 (267)
T ss_pred             HHHHhC-CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHH
Confidence            555543 34455666789999999999999999999994443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.88  E-value=2.7e-22  Score=176.50  Aligned_cols=136  Identities=23%  Similarity=0.338  Sum_probs=107.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       258 ~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------------------------------------------  295 (401)
T cd05107         258 KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY------------------------------------------  295 (401)
T ss_pred             CCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc------------------------------------------
Confidence            68999999999999999999999999998543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......++..|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus       296 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~  350 (401)
T cd05107         296 -------------------------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ  350 (401)
T ss_pred             -------------------------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence                                     00001246788999999988889999999999999999998 8999988776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+......+.+..++.++.+|+.+||..+|++||+    +++|+.
T Consensus       351 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs----~~ell~  394 (401)
T cd05107         351 FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPD----FSQLVH  394 (401)
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            66666655555555678999999999999999999999    555543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=3.8e-22  Score=164.73  Aligned_cols=131  Identities=21%  Similarity=0.382  Sum_probs=103.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||+++.......                                          
T Consensus       120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------  157 (256)
T cd05039         120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD------------------------------------------  157 (256)
T ss_pred             hCCccchhcccceEEEeCCCCEEEcccccccccccccc------------------------------------------
Confidence            36899999999999999999999999998854311100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                    ....+..|+|||++.+..++.++|||||||+++++++ |..||.......
T Consensus       158 ------------------------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  207 (256)
T cd05039         158 ------------------------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  207 (256)
T ss_pred             ------------------------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                          0023457999999988888999999999999999997 999998877665


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+. .......+..++..+.+||.+||..+|++||+    +++++.
T Consensus       208 ~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~l~~  251 (256)
T cd05039         208 VVPHVE-KGYRMEAPEGCPPEVYKVMKDCWELDPAKRPT----FKQLRE  251 (256)
T ss_pred             HHHHHh-cCCCCCCccCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence            554443 33333444568999999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.88  E-value=3.1e-22  Score=165.85  Aligned_cols=130  Identities=22%  Similarity=0.374  Sum_probs=102.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++|+||||+||+++.++.+||+|||++.........                                         
T Consensus       120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  158 (260)
T cd05073         120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-----------------------------------------  158 (260)
T ss_pred             hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-----------------------------------------
Confidence            368999999999999999999999999987543211000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|+|||||++|++++ |..||.+.+...
T Consensus       159 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  211 (260)
T cd05073         159 ---------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE  211 (260)
T ss_pred             ---------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                                       0000124567999999988888999999999999999998 999999877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS  199 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~  199 (250)
                      ....+ ......+.....+.++.+++.+||+.+|++||++
T Consensus       212 ~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  250 (260)
T cd05073         212 VIRAL-ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTF  250 (260)
T ss_pred             HHHHH-hCCCCCCCcccCCHHHHHHHHHHcccCcccCcCH
Confidence            65544 3444445556788999999999999999999993

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.88  E-value=4.8e-24  Score=184.42  Aligned_cols=156  Identities=29%  Similarity=0.510  Sum_probs=122.4

Q ss_pred             ccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+|+||||+|||+...   -.+||||||.|+.+....-.                                       
T Consensus       683 knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR---------------------------------------  723 (888)
T KOG4236|consen  683 KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR---------------------------------------  723 (888)
T ss_pred             cceeeccCCchheeeccCCCCCceeeccccceeecchhhhh---------------------------------------
Confidence            689999999999999754   36999999999776543211                                       


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                     .+.+||+.|+|||+++..+|...-|+||+|+++|.-++|..||+...+.
T Consensus       724 -------------------------------rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI  772 (888)
T KOG4236|consen  724 -------------------------------RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI  772 (888)
T ss_pred             -------------------------------hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch
Confidence                                           1358999999999999999999999999999999999999999865433


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC-Cccccc----cCCCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV-NWALLR----CTTPPFVPPP  231 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~-~~~~~~----~~~~~~~~~~  231 (250)
                      .  .+|-+..+-+|..  ..++.++++||+.+|+..-.+|++    +++.|.|||+++. -|.-|+    .+.++|+-++
T Consensus       773 n--dQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys----vdk~lsh~Wlq~yq~w~DLRelE~~igeRyiThe  846 (888)
T KOG4236|consen  773 N--DQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS----VDKSLSHPWLQDYQTWLDLRELEVRIGERYITHE  846 (888)
T ss_pred             h--HHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc----hHhhccchhhhcchHHHHHHHHHHhhCcceecCc
Confidence            2  2333333333332  468999999999999999999999    9999999999975 454443    3556676665


Q ss_pred             CC
Q 025601          232 FN  233 (250)
Q Consensus       232 ~~  233 (250)
                      -+
T Consensus       847 sD  848 (888)
T KOG4236|consen  847 SD  848 (888)
T ss_pred             ch
Confidence            44

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=3.8e-22  Score=166.01  Aligned_cols=138  Identities=25%  Similarity=0.364  Sum_probs=104.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|++|+||||+||+++.++.++|+|||++.............                                     
T Consensus       124 ~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~-------------------------------------  166 (269)
T cd05065         124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT-------------------------------------  166 (269)
T ss_pred             HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccc-------------------------------------
Confidence            3699999999999999999999999999875432211100000                                     


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ....-..+..|+|||++.+..++.++||||+||++||+++ |..||.+.....
T Consensus       167 ---------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~  219 (269)
T cd05065         167 ---------------------------SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  219 (269)
T ss_pred             ---------------------------cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH
Confidence                                       0000012457999999988889999999999999999886 999998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ....+ ......+....++..+.+++.+||..+|++||+    +++++
T Consensus       220 ~~~~i-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~i~  262 (269)
T cd05065         220 VINAI-EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPK----FGQIV  262 (269)
T ss_pred             HHHHH-HcCCcCCCcccCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            55554 344455556678999999999999999999999    66655

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.88  E-value=2.8e-22  Score=166.25  Aligned_cols=134  Identities=28%  Similarity=0.405  Sum_probs=100.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|+||||+||+++.++.++|+|||++.........                                         
T Consensus       124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~-----------------------------------------  162 (267)
T cd08224         124 SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-----------------------------------------  162 (267)
T ss_pred             hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc-----------------------------------------
Confidence            368999999999999999999999999987543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--H
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH--E  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~--~  158 (250)
                                                  .....++..|+|||++.+..++.++|+||+||++|+|++|..||.....  .
T Consensus       163 ----------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  214 (267)
T cd08224         163 ----------------------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY  214 (267)
T ss_pred             ----------------------------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH
Confidence                                        0012467889999999888899999999999999999999999965432  2


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .....+............++..+.++|.+||..+|++||+    +.+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~----~~~il  259 (267)
T cd08224         215 SLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPD----ISYVL  259 (267)
T ss_pred             HHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCC----HHHHH
Confidence            2333333322221112267889999999999999999999    55554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=2.1e-22  Score=169.06  Aligned_cols=138  Identities=20%  Similarity=0.292  Sum_probs=100.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+||||||+||+++.++.++|+|||++...........                                       
T Consensus       127 ~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~---------------------------------------  167 (284)
T cd05079         127 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYT---------------------------------------  167 (284)
T ss_pred             HCCeeecccchheEEEcCCCCEEECCCccccccccCcccee---------------------------------------
Confidence            36999999999999999999999999998755332111000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~-----  155 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|+|+++..|+...     
T Consensus       168 ---------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~  220 (284)
T cd05079         168 ---------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL  220 (284)
T ss_pred             ---------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh
Confidence                                       000124667899999998888899999999999999999987654221     


Q ss_pred             ---------ChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          156 ---------DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       156 ---------~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                               .........+......+....++..+.+|+.+||+.+|++||+    +.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~~il~  278 (284)
T cd05079         221 KMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT----FQNLIE  278 (284)
T ss_pred             hhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence                     1111222233333344555678999999999999999999999    777654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.88  E-value=8.6e-23  Score=188.52  Aligned_cols=179  Identities=42%  Similarity=0.719  Sum_probs=145.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||+|||+||+|++|..-|++|+.|||+.+.........-....-.                                 
T Consensus       161 ~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~---------------------------------  207 (1205)
T KOG0606|consen  161 SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIE---------------------------------  207 (1205)
T ss_pred             cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchH---------------------------------
Confidence            46999999999999999999999999999877655432211100000                                 


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                    +..-++       ..-..+||+-|+|||++...+|+..+|+|++|+++|+.+-|+.||.|...+++
T Consensus       208 --------------k~t~Ef-------~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel  266 (1205)
T KOG0606|consen  208 --------------KDTHEF-------QDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL  266 (1205)
T ss_pred             --------------HHHHHh-------hhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH
Confidence                          000000       01124799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCCCCC-CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCc
Q 025601          161 LANIVARALEFPKE-PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNR  234 (250)
Q Consensus       161 ~~~i~~~~~~~p~~-~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~  234 (250)
                      +.+++.....+|.. ..++.++++++..+|+.+|..|.. +..+-++.+|+||+.+||..|..+..+++|+....
T Consensus       267 fg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg-t~ga~evk~h~ff~~LDw~~llRqkaefvpql~~e  340 (1205)
T KOG0606|consen  267 FGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG-TGGALEVKQHGFFQLLDWKSLLRQKAEFVPQLESE  340 (1205)
T ss_pred             HhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcc-cchhhhhhhccceeecccchhhhhhcccccccccc
Confidence            99988877766654 568899999999999999999986 44788999999999999999888888999998553

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.87  E-value=3.5e-22  Score=162.39  Aligned_cols=137  Identities=47%  Similarity=0.832  Sum_probs=107.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+||+|+||+++.++.++|+|||++.......                                            
T Consensus       106 ~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------------------------------------  141 (244)
T smart00220      106 NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------------------------------------  141 (244)
T ss_pred             cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--------------------------------------------
Confidence            589999999999999999999999999875533221                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......++..|++||.+.+..++.++||||+|++++++++|..||.........
T Consensus       142 --------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~  195 (244)
T smart00220      142 --------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL  195 (244)
T ss_pred             --------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence                                      000124678899999998878889999999999999999999999874434333


Q ss_pred             HHHHHhc-cCCCCCCC-CChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARA-LEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~-~~~p~~~~-~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+.+... ........ ++..+.+++.+||..+|++||+    +.++++||||
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~----~~~~~~~~~~  244 (244)
T smart00220      196 FKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLT----AEEALQHPFF  244 (244)
T ss_pred             HHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccC----HHHHhhCCCC
Confidence            3333332 22222222 8899999999999999999999    9999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=4.8e-22  Score=164.60  Aligned_cols=89  Identities=22%  Similarity=0.411  Sum_probs=67.8

Q ss_pred             ccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcc
Q 025601          113 VGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGV-TPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLA  190 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~-~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~  190 (250)
                      .++..|+|||++.+. .++.++|||||||++|+|++|. .||......... .+.......+  ...+.++.+||.+||+
T Consensus       165 ~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~li~~~l~  241 (258)
T cd05078         165 LERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLP--APKWTELANLINQCMD  241 (258)
T ss_pred             cccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCC--CCCcHHHHHHHHHHhc
Confidence            467889999999874 4789999999999999999984 666555444332 2333333333  3467889999999999


Q ss_pred             cCccccCCCccChHHHhc
Q 025601          191 KDPERRLGSTKGASAIKH  208 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~  208 (250)
                      .+|++||+    ++++++
T Consensus       242 ~~p~~Rps----~~~il~  255 (258)
T cd05078         242 YEPDFRPS----FRAIIR  255 (258)
T ss_pred             cChhhCCC----HHHHHH
Confidence            99999999    777764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=5.7e-22  Score=163.34  Aligned_cols=135  Identities=27%  Similarity=0.410  Sum_probs=106.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++..........                                        
T Consensus       121 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------------------------------------  160 (258)
T smart00219      121 SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK----------------------------------------  160 (258)
T ss_pred             cCCeeecccccceEEEccCCeEEEcccCCceecccccccc----------------------------------------
Confidence            3689999999999999999999999999875543221000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  .....++..|+|||.+.+..++.++|+||+||++++|++ |..||.+.....
T Consensus       161 ----------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~  212 (258)
T smart00219      161 ----------------------------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE  212 (258)
T ss_pred             ----------------------------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                                        000125678999999987778999999999999999998 889998877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+.... .......++.++.+++.+||..+|++|||    +.++++
T Consensus       213 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt----~~~ll~  256 (258)
T smart00219      213 VLEYLKKGY-RLPKPENCPPEIYKLMLQCWAEDPEDRPT----FSELVE  256 (258)
T ss_pred             HHHHHhcCC-CCCCCCcCCHHHHHHHHHHCcCChhhCcC----HHHHHh
Confidence            666554433 34445568999999999999999999999    888774

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.87  E-value=1.9e-22  Score=189.31  Aligned_cols=150  Identities=22%  Similarity=0.358  Sum_probs=102.3

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||+++...............                                  
T Consensus       131 s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~----------------------------------  176 (932)
T PRK13184        131 SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVD----------------------------------  176 (932)
T ss_pred             HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccc----------------------------------
Confidence            3699999999999999999999999999986652211100000000                                  


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                      ...... .........+||+.|+|||++.+..++.++||||+||++|+|++|..||.+......
T Consensus       177 ----------------~~~s~~-s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki  239 (932)
T PRK13184        177 ----------------ERNICY-SSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI  239 (932)
T ss_pred             ----------------cccccc-cccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence                            000000 000011134699999999999998899999999999999999999999987554433


Q ss_pred             HHH-HHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LAN-IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~-i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ... .+...........++..+.+++.+||+.||++|++..+
T Consensus       240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e  281 (932)
T PRK13184        240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQ  281 (932)
T ss_pred             hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            222 11111112222468899999999999999999988433

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.87  E-value=3.8e-22  Score=166.03  Aligned_cols=135  Identities=21%  Similarity=0.330  Sum_probs=98.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++..........                                        
T Consensus       118 ~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  157 (269)
T cd05042         118 QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI----------------------------------------  157 (269)
T ss_pred             hcCEecccccHhheEecCCCcEEEeccccccccccchhee----------------------------------------
Confidence            3689999999999999999999999999874322110000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-------CCCCchhHHHHHHHHHHHHHh-CCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-------EGHGSPVDWWTLGIFLFELFY-GVTPF  152 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~vl~ellt-g~~pf  152 (250)
                                                 ......++..|+|||++..       ..++.++|||||||++|+|++ |..||
T Consensus       158 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  210 (269)
T cd05042         158 ---------------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY  210 (269)
T ss_pred             ---------------------------ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCC
Confidence                                       0001135678999998743       346889999999999999998 78899


Q ss_pred             CCCChHHHHHHHHHhcc-CCC---CCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          153 RGVDHELTLANIVARAL-EFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       153 ~~~~~~~~~~~i~~~~~-~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ......+.+..++.... ..+   ....++..+.+++..|+ .||++||+    +++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt----~~~v~  264 (269)
T cd05042         211 PDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPT----AEEVH  264 (269)
T ss_pred             CcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccC----HHHHH
Confidence            88777666666554432 111   12357888899999998 59999999    65554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.87  E-value=3.4e-22  Score=166.45  Aligned_cols=136  Identities=19%  Similarity=0.334  Sum_probs=104.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++.........                                        
T Consensus       131 ~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  170 (273)
T cd05074         131 SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR----------------------------------------  170 (273)
T ss_pred             hCCEeecccchhhEEEcCCCCEEECcccccccccCCccee----------------------------------------
Confidence            3689999999999999999999999999886532211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|++||.+.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       171 ---------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~  223 (273)
T cd05074         171 ---------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE  223 (273)
T ss_pred             ---------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH
Confidence                                       0001134567999999988888999999999999999998 899998877665


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+... ........++..+.+++.+||+.+|++||+    +.+++.
T Consensus       224 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps----~~~~~~  267 (273)
T cd05074         224 IYNYLIKG-NRLKQPPDCLEDVYELMCQCWSPEPKCRPS----FQHLRD  267 (273)
T ss_pred             HHHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            55555433 233344567899999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=6.6e-22  Score=164.36  Aligned_cols=128  Identities=20%  Similarity=0.288  Sum_probs=95.5

Q ss_pred             CccceeecCCCCcEEeCCCCC-------eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCC
Q 025601            1 MLGIVYRDLKPENVLVRSDGH-------IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPN   73 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~-------~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (250)
                      ++||+||||||+|||++.++.       ++++|||++.......                                    
T Consensus       123 ~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~------------------------------------  166 (262)
T cd05077         123 DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ------------------------------------  166 (262)
T ss_pred             hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc------------------------------------
Confidence            368999999999999986654       8999999874322110                                    


Q ss_pred             CCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHH-hCCCC
Q 025601           74 CIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELF-YGVTP  151 (250)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~ell-tg~~p  151 (250)
                                                           ...++..|+|||++.+ ..++.++|||||||++|+|+ .|..|
T Consensus       167 -------------------------------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p  209 (262)
T cd05077         167 -------------------------------------ECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIP  209 (262)
T ss_pred             -------------------------------------cccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence                                                 1246788999999874 55899999999999999997 68888


Q ss_pred             CCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          152 FRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       152 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      |......+. ..+......  .....+.++.+||.+||+.||++||+    ..+++.
T Consensus       210 ~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~----~~~il~  259 (262)
T cd05077         210 LKDKTLAEK-ERFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPF----FRAIMR  259 (262)
T ss_pred             CCCcchhHH-HHHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            876654333 222232222  22345688999999999999999999    777765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1e-21  Score=164.41  Aligned_cols=131  Identities=22%  Similarity=0.309  Sum_probs=101.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       128 ~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~-----------------------------------------  166 (279)
T cd05057         128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEY-----------------------------------------  166 (279)
T ss_pred             CCEEecccCcceEEEcCCCeEEECCCcccccccCcccce-----------------------------------------
Confidence            689999999999999999999999999885543211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||.+....++.++|+|||||+++++++ |..||.+....+.
T Consensus       167 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  220 (279)
T cd05057         167 --------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI  220 (279)
T ss_pred             --------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence                                      0000123567999999988888999999999999999998 9999988776655


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      ...+. .....+.+..++..+.+++.+||..+|++||++.
T Consensus       221 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~  259 (279)
T cd05057         221 PDLLE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFK  259 (279)
T ss_pred             HHHHh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence            44443 3444455566889999999999999999999933

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.87  E-value=1.5e-22  Score=159.03  Aligned_cols=142  Identities=28%  Similarity=0.457  Sum_probs=111.3

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+|||+||.|++|++. -.++|.|+|||....+...-.                                       
T Consensus       150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn---------------------------------------  190 (338)
T KOG0668|consen  150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN---------------------------------------  190 (338)
T ss_pred             hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee---------------------------------------
Confidence            5799999999999999975 569999999996644332111                                       


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCC-CCCCh
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPF-RGVDH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf-~~~~~  157 (250)
                                                 .    .+.+..|-.||.+..-+ |+..-|+|||||+++.|+..+.|| .|.++
T Consensus       191 ---------------------------V----RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  191 ---------------------------V----RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             ---------------------------e----eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence                                       0    13456788999998755 799999999999999999888776 68888


Q ss_pred             HHHHHHHHHhccC-----------CCC------------------------CCCCChHHHHHHHHhcccCccccCCCccC
Q 025601          158 ELTLANIVARALE-----------FPK------------------------EPAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       158 ~~~~~~i~~~~~~-----------~p~------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      .+++.+|.+-.+.           +..                        ..-+++++.+|+.++|..|-++|+|    
T Consensus       240 ~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT----  315 (338)
T KOG0668|consen  240 YDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT----  315 (338)
T ss_pred             HHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc----
Confidence            8888777652211           000                        0235688999999999999999999    


Q ss_pred             hHHHhcCCCCCCCC
Q 025601          203 ASAIKHHPFFQGVN  216 (250)
Q Consensus       203 a~~ll~hp~~~~~~  216 (250)
                      |.|+..||||..+.
T Consensus       316 akEam~HpyF~~~~  329 (338)
T KOG0668|consen  316 AKEAMAHPYFAPVR  329 (338)
T ss_pred             hHHHhcCchHHHHH
Confidence            99999999998764

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=8.6e-22  Score=165.14  Aligned_cols=138  Identities=22%  Similarity=0.328  Sum_probs=100.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++...........                                       
T Consensus       126 ~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~---------------------------------------  166 (284)
T cd05081         126 SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYK---------------------------------------  166 (284)
T ss_pred             HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCccee---------------------------------------
Confidence            36999999999999999999999999998865432110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE--  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~--  158 (250)
                                                 ......++..|+|||++.+..++.++|||||||+++||++|..++......  
T Consensus       167 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~  219 (284)
T cd05081         167 ---------------------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM  219 (284)
T ss_pred             ---------------------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh
Confidence                                       000002345699999998888999999999999999999987765432211  


Q ss_pred             -------------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          159 -------------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       159 -------------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                                   ..+..++......+....++.++.+|+.+||..+|++|||    +.+++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~~  278 (284)
T cd05081         220 RMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS----FSELAL  278 (284)
T ss_pred             hhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence                         1122334444445556678999999999999999999999    666543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.86  E-value=2.8e-22  Score=166.36  Aligned_cols=134  Identities=28%  Similarity=0.468  Sum_probs=102.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++|+|+||+++||+++.++.+||+|||++..........                                         
T Consensus       122 ~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~-----------------------------------------  160 (259)
T PF07714_consen  122 NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK-----------------------------------------  160 (259)
T ss_dssp             TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE-----------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccc-----------------------------------------
Confidence            689999999999999999999999999885542111000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ..........|+|||++.+..++.++||||||+++||+++ |+.||......+.
T Consensus       161 --------------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~  214 (259)
T PF07714_consen  161 --------------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEI  214 (259)
T ss_dssp             --------------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHH
T ss_pred             --------------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                      0001134578999999988889999999999999999999 7899998877776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+ ......+.+..++..+.++|..||..+|++||+    +.+++
T Consensus       215 ~~~~-~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs----~~~i~  256 (259)
T PF07714_consen  215 IEKL-KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPS----FQEIL  256 (259)
T ss_dssp             HHHH-HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS------HHHHH
T ss_pred             cccc-cccccceeccchhHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            6666 444445556678999999999999999999999    66665

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.86  E-value=3e-21  Score=160.73  Aligned_cols=134  Identities=19%  Similarity=0.292  Sum_probs=97.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.++|+|||++.........                                          
T Consensus       118 ~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------------  155 (268)
T cd05086         118 HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI------------------------------------------  155 (268)
T ss_pred             CCeeccCCccceEEEcCCccEEecccccccccCcchhh------------------------------------------
Confidence            68999999999999999999999999986432111000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-------CCCCchhHHHHHHHHHHHHHh-CCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-------EGHGSPVDWWTLGIFLFELFY-GVTPFR  153 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~vl~ellt-g~~pf~  153 (250)
                                               .......++..|+|||++..       ..++.++|||||||++|+|++ |..||.
T Consensus       156 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  210 (268)
T cd05086         156 -------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS  210 (268)
T ss_pred             -------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence                                     00001256789999998753       235788999999999999996 577888


Q ss_pred             CCChHHHHHHHHHhccC----CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          154 GVDHELTLANIVARALE----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       154 ~~~~~~~~~~i~~~~~~----~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .....+.+..++.....    ......++..+.+++..|| .+|++||+    +++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~----~~~i~  263 (268)
T cd05086         211 HLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRAT----AEEVH  263 (268)
T ss_pred             CCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCC----HHHHH
Confidence            77777666665544321    1122357888999999999 67999999    66654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.86  E-value=1.8e-22  Score=170.38  Aligned_cols=103  Identities=27%  Similarity=0.458  Sum_probs=76.2

Q ss_pred             CCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHH------------HhccC--C--
Q 025601          110 MSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDH-ELTLANIV------------ARALE--F--  171 (250)
Q Consensus       110 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~-~~~~~~i~------------~~~~~--~--  171 (250)
                      +...||++|+|||++...+ .++++||||.|+++..++++.+||-...+ -..+.+|+            ...+.  .  
T Consensus       235 anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~  314 (418)
T KOG1167|consen  235 ANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQ  314 (418)
T ss_pred             cccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeec
Confidence            4557999999999999865 79999999999999999999999853321 11111111            10000  0  


Q ss_pred             -------------------------C--------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          172 -------------------------P--------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       172 -------------------------p--------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                                               .        .....+..+.+|+.+||..||.+|.|    |+++|.||||...+
T Consensus       315 ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRit----AEeALkHpFF~~~~  388 (418)
T KOG1167|consen  315 KSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRIT----AEDALKHPFFDEAD  388 (418)
T ss_pred             cccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhccc----HHHHhcCcCCcchh
Confidence                                     0        00223457899999999999999999    99999999999765

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=2.3e-21  Score=160.01  Aligned_cols=128  Identities=23%  Similarity=0.297  Sum_probs=95.0

Q ss_pred             CccceeecCCCCcEEeCCCC-------CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCC
Q 025601            1 MLGIVYRDLKPENVLVRSDG-------HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPN   73 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-------~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (250)
                      ++||+||||||+||+++.++       .+||+|||++.......                                    
T Consensus       119 ~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------  162 (259)
T cd05037         119 DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE------------------------------------  162 (259)
T ss_pred             hCCeecccCccceEEEecCccccCCceeEEeCCCCccccccccc------------------------------------
Confidence            36899999999999999877       79999999875432200                                    


Q ss_pred             CCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHh-CCC
Q 025601           74 CIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFY-GVT  150 (250)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~ellt-g~~  150 (250)
                                                           ...++..|+|||++.+.  .++.++|||||||++|+|++ |..
T Consensus       163 -------------------------------------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~  205 (259)
T cd05037         163 -------------------------------------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEE  205 (259)
T ss_pred             -------------------------------------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCC
Confidence                                                 11356779999999876  68999999999999999999 578


Q ss_pred             CCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          151 PFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       151 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ||.......... ........+.  .....+.+|+.+||..+|.+||+    +.+++.
T Consensus       206 p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt----~~~il~  256 (259)
T cd05037         206 PLSTLSSSEKER-FYQDQHRLPM--PDCAELANLINQCWTYDPTKRPS----FRAILR  256 (259)
T ss_pred             CcccCCchhHHH-HHhcCCCCCC--CCchHHHHHHHHHhccChhhCCC----HHHHHH
Confidence            887665332222 2222222222  23478999999999999999999    666553

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=1.1e-22  Score=178.66  Aligned_cols=139  Identities=29%  Similarity=0.502  Sum_probs=121.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +++|||||||.+|||++.+..+||+|||++.......                                           
T Consensus       173 ~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~-------------------------------------------  209 (596)
T KOG0586|consen  173 SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL-------------------------------------------  209 (596)
T ss_pred             hcceeccccchhhcccccccceeeeccccceeecccc-------------------------------------------
Confidence            4689999999999999999999999999875544221                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ...+++|++.|.|||++.|..| ++.+|+||+|+++|.|+.|..||.|....+
T Consensus       210 ---------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~  262 (596)
T KOG0586|consen  210 ---------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE  262 (596)
T ss_pred             ---------------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc
Confidence                                       1125789999999999999886 899999999999999999999999999888


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ...+.+.+.+.+|.  .++.++.++|.+||..+|.+|++    ..++-.|.|.-..
T Consensus       263 Lr~rvl~gk~rIp~--~ms~dce~lLrk~lvl~Pskr~~----~dqim~~~W~n~~  312 (596)
T KOG0586|consen  263 LRPRVLRGKYRIPF--YMSCDCEDLLRKFLVLNPSKRGP----CDQIMKDRWRNDL  312 (596)
T ss_pred             ccchheeeeecccc--eeechhHHHHHHhhccCccccCC----HHHhhhhcccchh
Confidence            88888878777766  58999999999999999999999    9999999997653

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.86  E-value=2.7e-21  Score=160.95  Aligned_cols=134  Identities=24%  Similarity=0.390  Sum_probs=96.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.++|+|||+++........                                          
T Consensus       119 ~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~------------------------------------------  156 (269)
T cd05087         119 NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY------------------------------------------  156 (269)
T ss_pred             CCEeccccCcceEEEcCCCcEEECCccccccccCccee------------------------------------------
Confidence            68999999999999999999999999987432111000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-------CCCchhHHHHHHHHHHHHHh-CCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-------GHGSPVDWWTLGIFLFELFY-GVTPFR  153 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlG~vl~ellt-g~~pf~  153 (250)
                                               .......++..|+|||++.+.       .++.++|+|||||++|+|++ |..||.
T Consensus       157 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~  211 (269)
T cd05087         157 -------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR  211 (269)
T ss_pred             -------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence                                     000012467889999998642       35789999999999999996 999998


Q ss_pred             CCChHHHHHHHHHh-ccCCCCC---CCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          154 GVDHELTLANIVAR-ALEFPKE---PAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       154 ~~~~~~~~~~i~~~-~~~~p~~---~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      .....+........ ....+.+   ...+..+.+++.+|+ .+|++|||    +++|+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt----~~~l~  264 (269)
T cd05087         212 HLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPS----AEEVH  264 (269)
T ss_pred             CCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCC----HHHHH
Confidence            77665544333322 1222221   246788999999999 68999999    66654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.86  E-value=2.3e-22  Score=176.89  Aligned_cols=133  Identities=28%  Similarity=0.426  Sum_probs=112.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++.+|||||..+|||+.+...+||+||||++.+.+...-....                                     
T Consensus       509 SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~-------------------------------------  551 (974)
T KOG4257|consen  509 SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR-------------------------------------  551 (974)
T ss_pred             hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccc-------------------------------------
Confidence            4678999999999999999999999999997766543211000                                     


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ell-tg~~pf~~~~~~~  159 (250)
                                                     -.-...|||||.+..+.++.++|||-||+++||++ .|..||.|..+.+
T Consensus       552 -------------------------------~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD  600 (974)
T KOG4257|consen  552 -------------------------------GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD  600 (974)
T ss_pred             -------------------------------cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc
Confidence                                           01235799999999999999999999999999987 5999999999999


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      ++..| +.+-+.|.+++||+.+..|+.+||.++|.+||+|++.
T Consensus       601 VI~~i-EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei  642 (974)
T KOG4257|consen  601 VIGHI-ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI  642 (974)
T ss_pred             eEEEe-cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence            88776 4555789999999999999999999999999998873

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=1.4e-21  Score=163.51  Aligned_cols=137  Identities=22%  Similarity=0.340  Sum_probs=102.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+|+||||+||+++.++.++|+|||++...........                                       
T Consensus       127 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---------------------------------------  167 (284)
T cd05038         127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYY---------------------------------------  167 (284)
T ss_pred             hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCccee---------------------------------------
Confidence            36899999999999999999999999998855432111000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH---  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~---  157 (250)
                                                 ......++..|++||++.+..++.++|||||||++++|++|..||.....   
T Consensus       168 ---------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~  220 (284)
T cd05038         168 ---------------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL  220 (284)
T ss_pred             ---------------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhc
Confidence                                       00001244679999999888889999999999999999999999865432   


Q ss_pred             -----------HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          158 -----------ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       158 -----------~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                                 ...+...+......+....++.++.+|+.+||+.+|++||+    +.+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~ei~  277 (284)
T cd05038         221 RMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPS----FADLI  277 (284)
T ss_pred             cccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCC----HHHHH
Confidence                       12233344444455555678899999999999999999999    55554

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=4.4e-21  Score=160.47  Aligned_cols=89  Identities=25%  Similarity=0.390  Sum_probs=68.2

Q ss_pred             ccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcc
Q 025601          113 VGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLA  190 (250)
Q Consensus       113 ~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~ell-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~  190 (250)
                      .++..|+|||++.+ ..++.++|||||||++|+|+ +|..||.+....+.. .........+  ...+..+.+||.+||+
T Consensus       181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~li~~cl~  257 (274)
T cd05076         181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLP--EPSCKELATLISQCLT  257 (274)
T ss_pred             ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCC--CCCChHHHHHHHHHcc
Confidence            35678999999876 45899999999999999984 799999876654433 2333333333  2456789999999999


Q ss_pred             cCccccCCCccChHHHhc
Q 025601          191 KDPERRLGSTKGASAIKH  208 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~  208 (250)
                      .+|++||+    +.+++.
T Consensus       258 ~~p~~Rps----~~~il~  271 (274)
T cd05076         258 YEPTQRPS----FRTILR  271 (274)
T ss_pred             cChhhCcC----HHHHHH
Confidence            99999999    777765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.85  E-value=2.4e-21  Score=173.49  Aligned_cols=141  Identities=23%  Similarity=0.315  Sum_probs=99.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+||+++.++.+||+|||++..+......                                          
T Consensus       328 ~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~------------------------------------------  365 (507)
T PLN03224        328 IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF------------------------------------------  365 (507)
T ss_pred             CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc------------------------------------------
Confidence            58999999999999999999999999988543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--------------------C--CchhHHHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--------------------H--GSPVDWWTLG  139 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--------------------~--~~~~DiwSlG  139 (250)
                                                ....-.+|+.|+|||++....                    +  ....||||+|
T Consensus       366 --------------------------~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlG  419 (507)
T PLN03224        366 --------------------------NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAG  419 (507)
T ss_pred             --------------------------CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHH
Confidence                                      000013478999999886422                    1  1246999999


Q ss_pred             HHHHHHHhCCC-CCCCCChH-----------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCc---cccCCCccChH
Q 025601          140 IFLFELFYGVT-PFRGVDHE-----------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDP---ERRLGSTKGAS  204 (250)
Q Consensus       140 ~vl~elltg~~-pf~~~~~~-----------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP---~~R~t~~~~a~  204 (250)
                      |++++|++|.. ||.+....           .....+......++.....+...++|+.+||..+|   .+|+|    ++
T Consensus       420 vil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS----a~  495 (507)
T PLN03224        420 VLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS----VG  495 (507)
T ss_pred             HHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC----HH
Confidence            99999999875 66543211           11111122233444445678999999999999876   68999    99


Q ss_pred             HHhcCCCCCC
Q 025601          205 AIKHHPFFQG  214 (250)
Q Consensus       205 ~ll~hp~~~~  214 (250)
                      ++|.||||..
T Consensus       496 eaL~Hp~f~~  505 (507)
T PLN03224        496 QALSHRFFLP  505 (507)
T ss_pred             HHhCCCCcCC
Confidence            9999999953

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=7.5e-22  Score=175.58  Aligned_cols=141  Identities=20%  Similarity=0.291  Sum_probs=114.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++++|||||..+|+++.....+||+||||.+......+-.....                                    
T Consensus       230 skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p------------------------------------  273 (1039)
T KOG0199|consen  230 SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP------------------------------------  273 (1039)
T ss_pred             hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecC------------------------------------
Confidence            36899999999999999999999999999876554332110000                                    


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                    ...-...|+|||.+....++.++|||++|++||||++ |+.||.|.....
T Consensus       274 ------------------------------~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q  323 (1039)
T KOG0199|consen  274 ------------------------------QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ  323 (1039)
T ss_pred             ------------------------------CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH
Confidence                                          0012357999999999999999999999999999995 899999999888


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+.+|- .....+.+..|++.+.+++..||..+|++||+|-.+.++++.
T Consensus       324 IL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l  371 (1039)
T KOG0199|consen  324 ILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL  371 (1039)
T ss_pred             HHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence            887775 566778888999999999999999999999997665444433

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.6e-21  Score=177.16  Aligned_cols=142  Identities=25%  Similarity=0.367  Sum_probs=112.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ..+|||||-.+|||+..+..+|++|||+++.......-...                                       
T Consensus       437 ~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~---------------------------------------  477 (609)
T KOG0200|consen  437 VPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTK---------------------------------------  477 (609)
T ss_pred             CCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEec---------------------------------------
Confidence            56899999999999999999999999999754332211000                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                +.... -...|||||.+....|+.++||||+|+++||+++ |..|+.+......
T Consensus       478 --------------------------~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~  530 (609)
T KOG0200|consen  478 --------------------------SSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE  530 (609)
T ss_pred             --------------------------CCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence                                      00000 1235999999999889999999999999999986 8899998763444


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +.+.+..+..+..+..++.++.++|+.||+.+|++||+|.+..+.+-.|
T Consensus       531 l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  531 LLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            4557778888888999999999999999999999999988866655553

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=6.6e-22  Score=173.44  Aligned_cols=137  Identities=24%  Similarity=0.388  Sum_probs=115.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++++|||||-.+|+|++.++.+||+||||++........                                         
T Consensus       280 ~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~-----------------------------------------  318 (474)
T KOG0194|consen  280 SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK-----------------------------------------  318 (474)
T ss_pred             HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeec-----------------------------------------
Confidence            468999999999999999999999999997443210000                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                  ...-.-...|+|||.+...-|+.++|||||||++||+++ |..||.+....+
T Consensus       319 ----------------------------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~  370 (474)
T KOG0194|consen  319 ----------------------------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE  370 (474)
T ss_pred             ----------------------------cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH
Confidence                                        000012368999999999899999999999999999997 899999999999


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      ...+|+....+++.+...|..+..++..|+..+|++|++|.+.++.+
T Consensus       371 v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l  417 (474)
T KOG0194|consen  371 VKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKL  417 (474)
T ss_pred             HHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHH
Confidence            99999888889888889999999999999999999999988765443

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=1.4e-21  Score=177.48  Aligned_cols=140  Identities=28%  Similarity=0.424  Sum_probs=113.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ..+||||||..|||++.+|.+||+|||++.....-                                             
T Consensus       142 nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------------------------------------  176 (953)
T KOG0587|consen  142 NKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------------------------------------  176 (953)
T ss_pred             cceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------------------------------------
Confidence            35899999999999999999999999987443221                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                              ..+...++||+.|||||++.-     ..|+..+|+||||++..||..|.+|+-++-
T Consensus       177 ------------------------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH  232 (953)
T KOG0587|consen  177 ------------------------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH  232 (953)
T ss_pred             ------------------------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc
Confidence                                    123345689999999999963     458999999999999999999999998877


Q ss_pred             hHHHHHHHHHhccCC-CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          157 HELTLANIVARALEF-PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~-p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ....+..|.....+- ..+..-++++.+||..||.+|-..||+    ..++|.|||+..
T Consensus       233 PmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~----~~~ll~hpFi~e  287 (953)
T KOG0587|consen  233 PMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS----TEELLKHPFITE  287 (953)
T ss_pred             hhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc----hhhhccCCcccc
Confidence            777776665433221 113456788999999999999999999    999999999983

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=5.9e-21  Score=168.23  Aligned_cols=131  Identities=21%  Similarity=0.354  Sum_probs=112.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +++|||||..+|+|+..+..+|++||||++.|.......+...                                     
T Consensus       384 knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA-------------------------------------  426 (1157)
T KOG4278|consen  384 KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA-------------------------------------  426 (1157)
T ss_pred             hhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc-------------------------------------
Confidence            5789999999999999999999999999988876543322211                                     


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                     .-...|.|||-+....++.++|||+||++|||+.| |..|+.|.+...+
T Consensus       427 -------------------------------KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV  475 (1157)
T KOG4278|consen  427 -------------------------------KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  475 (1157)
T ss_pred             -------------------------------cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH
Confidence                                           12357999999999999999999999999999985 8899999876654


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                       ..+++..+++..+..||+...+||..||+++|.+||+|++
T Consensus       476 -Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFae  515 (1157)
T KOG4278|consen  476 -YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAE  515 (1157)
T ss_pred             -HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHH
Confidence             5677889999999999999999999999999999999776

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.83  E-value=7.5e-22  Score=177.29  Aligned_cols=136  Identities=26%  Similarity=0.382  Sum_probs=112.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|+|||||..+|||++.+-.+|++||||++...+....  ..+..                                   
T Consensus       750 m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~--~ytt~-----------------------------------  792 (996)
T KOG0196|consen  750 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA--AYTTL-----------------------------------  792 (996)
T ss_pred             cCchhhhhhhhheeeccceEEEeccccceeecccCCCc--ccccc-----------------------------------
Confidence            68999999999999999999999999999765433210  00000                                   


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ell-tg~~pf~~~~~~~~  160 (250)
                                                   +=.-..+|.|||.|..++++.++||||+|+|+||.+ .|..|+=++++.++
T Consensus       793 -----------------------------GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV  843 (996)
T KOG0196|consen  793 -----------------------------GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV  843 (996)
T ss_pred             -----------------------------CCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH
Confidence                                         001236899999999999999999999999999987 69999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS  204 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~  204 (250)
                      +..| +..++.|.+.+||..+.+||.-||++|-++||.|.+++.
T Consensus       844 IkaI-e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  844 IKAI-EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHH-HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence            8766 567788889999999999999999999999999776543

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.82  E-value=9.1e-21  Score=146.92  Aligned_cols=98  Identities=30%  Similarity=0.490  Sum_probs=77.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +.|||||+||+||||+.+|++|+||||++-...++-...                                         
T Consensus       168 L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt-----------------------------------------  206 (282)
T KOG0984|consen  168 LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT-----------------------------------------  206 (282)
T ss_pred             hhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH-----------------------------------------
Confidence            569999999999999999999999999874433321100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC----CCCCchhHHHHHHHHHHHHHhCCCCCCC-CC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG----EGHGSPVDWWTLGIFLFELFYGVTPFRG-VD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~vl~elltg~~pf~~-~~  156 (250)
                                                   -..|-..|||||.+..    .+|+.++||||||+.+.||.++++|+.. .+
T Consensus       207 -----------------------------~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t  257 (282)
T KOG0984|consen  207 -----------------------------MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT  257 (282)
T ss_pred             -----------------------------HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence                                         0136689999998864    3589999999999999999999999964 45


Q ss_pred             hHHHHHHHHHhcc
Q 025601          157 HELTLANIVARAL  169 (250)
Q Consensus       157 ~~~~~~~i~~~~~  169 (250)
                      .-+++.++++...
T Consensus       258 pF~qLkqvVeep~  270 (282)
T KOG0984|consen  258 PFQQLKQVVEEPS  270 (282)
T ss_pred             HHHHHHHHhcCCC
Confidence            6677778777543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=8e-21  Score=164.26  Aligned_cols=134  Identities=25%  Similarity=0.366  Sum_probs=94.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCC-CcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD-SASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      -|||||||++|||+|.+...||+|||+++.... ....                                          
T Consensus       197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~------------------------------------------  234 (361)
T KOG1187|consen  197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV------------------------------------------  234 (361)
T ss_pred             CEecCCCCHHHeeECCCCCEEccCccCcccCCccccce------------------------------------------
Confidence            399999999999999999999999999944332 1100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCc-ccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSF-VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD--HE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~--~~  158 (250)
                                                  ... .||..|++||++.....+.++||||||+++.||++|+.+.....  ..
T Consensus       235 ----------------------------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~  286 (361)
T KOG1187|consen  235 ----------------------------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE  286 (361)
T ss_pred             ----------------------------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc
Confidence                                        001 48999999999998878999999999999999999998876432  11


Q ss_pred             H-HHH---HHHHh-----ccCCCCC-CCCC-----hHHHHHHHHhcccCccccCCCccChHHH
Q 025601          159 L-TLA---NIVAR-----ALEFPKE-PAVP-----ATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       159 ~-~~~---~i~~~-----~~~~p~~-~~~~-----~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      . ...   ..+..     ....... ..++     ..+..+..+|++.+|++||+|.+.+.++
T Consensus       287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L  349 (361)
T KOG1187|consen  287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL  349 (361)
T ss_pred             ccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence            1 111   11111     1110000 1223     2256789999999999999988765555

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.3e-20  Score=158.01  Aligned_cols=146  Identities=32%  Similarity=0.500  Sum_probs=112.9

Q ss_pred             cceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            3 GIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         3 giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      -|||-||||.|||+-   ..|.+||.||||++.|..........-.                                  
T Consensus       590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGme----------------------------------  635 (775)
T KOG1151|consen  590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGME----------------------------------  635 (775)
T ss_pred             CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccccee----------------------------------
Confidence            389999999999995   4588999999999888765433221100                                  


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC----CCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE----GHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                  -+....||-+|++||++.-.    ..+.++||||+|+++|+.+.|+.||-..
T Consensus       636 ----------------------------LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn  687 (775)
T KOG1151|consen  636 ----------------------------LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN  687 (775)
T ss_pred             ----------------------------eecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence                                        11234689999999998633    3789999999999999999999999532


Q ss_pred             -ChHHHH--HHHH-HhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          156 -DHELTL--ANIV-ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       156 -~~~~~~--~~i~-~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                       +..+.+  ..|+ .....||..+-++.++++||.+||++--++|..    +-+|-.||||.-
T Consensus       688 qsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~D----V~qLA~dpyllP  746 (775)
T KOG1151|consen  688 QSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRID----VQQLACDPYLLP  746 (775)
T ss_pred             hhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhh----HHHHccCccccc
Confidence             222222  1233 345668888889999999999999999999999    999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.81  E-value=9.3e-21  Score=167.36  Aligned_cols=150  Identities=47%  Similarity=0.857  Sum_probs=125.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +.||||||+|++||+++.+|++++.|||+++.......                                          
T Consensus       115 ~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~------------------------------------------  152 (612)
T KOG0603|consen  115 KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI------------------------------------------  152 (612)
T ss_pred             hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh------------------------------------------
Confidence            36899999999999999999999999998755332210                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                     -+||.-|||||++.  ++..++|.||+|++.+||++|..||.+    ++
T Consensus       153 -------------------------------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~  195 (612)
T KOG0603|consen  153 -------------------------------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DT  195 (612)
T ss_pred             -------------------------------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HH
Confidence                                           16899999999998  567899999999999999999999987    66


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPP  231 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~  231 (250)
                      ...|++....+|.  .++..+++++..++..+|..|.... +.+.++++|+||.+++|..+  +++.+|+-|-.
T Consensus       196 ~~~Il~~~~~~p~--~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~  267 (612)
T KOG0603|consen  196 MKRILKAELEMPR--ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGS  267 (612)
T ss_pred             HHHHhhhccCCch--hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcc
Confidence            7777776665555  6899999999999999999999854 67899999999999999966  44555555544

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.76  E-value=7.1e-19  Score=154.05  Aligned_cols=134  Identities=22%  Similarity=0.304  Sum_probs=105.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++++|||||.+.|+|++.++++||+|||+++-.-....-..                                       
T Consensus       655 s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v---------------------------------------  695 (807)
T KOG1094|consen  655 SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV---------------------------------------  695 (807)
T ss_pred             hhchhhccccccceeecCcccEEecCcccccccccCCceee---------------------------------------
Confidence            46899999999999999999999999999854322111000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHH--hCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF--YGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ell--tg~~pf~~~~~~  158 (250)
                                                  ....+-..+|||+|.+.-.++++++|+|+||+++||++  +...||....++
T Consensus       696 ----------------------------qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e  747 (807)
T KOG1094|consen  696 ----------------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE  747 (807)
T ss_pred             ----------------------------ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH
Confidence                                        00124457999999999999999999999999999986  688999988888


Q ss_pred             HHHHHHHHhc------cCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          159 LTLANIVARA------LEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       159 ~~~~~i~~~~------~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      +..++...-.      .-.+.+.-++..+.++|.+||.++-.+||+|.+
T Consensus       748 ~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~  796 (807)
T KOG1094|consen  748 QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQ  796 (807)
T ss_pred             HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHH
Confidence            7776654311      113445679999999999999999999999443

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.75  E-value=1.3e-18  Score=155.37  Aligned_cols=127  Identities=31%  Similarity=0.545  Sum_probs=93.7

Q ss_pred             CccceeecCCCCcEEeC--CCCC--eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLVR--SDGH--IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~--~~~~--~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      ++|||||||||.||++-  .+|.  -||+|||.|+......                                       
T Consensus       138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---------------------------------------  178 (732)
T KOG4250|consen  138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---------------------------------------  178 (732)
T ss_pred             HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---------------------------------------
Confidence            47999999999999985  3343  5999999997765432                                       


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                     ...+++||..|.+||+... +.|+..+|.|||||++|+++||..||...
T Consensus       179 -------------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  179 -------------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             -------------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence                                           2336789999999999985 67899999999999999999999999654


Q ss_pred             C----hHHHHHHHHHh-------------------ccCCCCCCCCChH----HHHHHHHhcccCccccC
Q 025601          156 D----HELTLANIVAR-------------------ALEFPKEPAVPAT----AKDLISQLLAKDPERRL  197 (250)
Q Consensus       156 ~----~~~~~~~i~~~-------------------~~~~p~~~~~~~~----~~~ll~~~L~~dP~~R~  197 (250)
                      .    +.+...+++.+                   ...+|.+...+..    +-..+..||..+|++|.
T Consensus       228 ~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  228 GGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             CCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence            3    22333343321                   1223333334433    44678889999999998

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.75  E-value=3.1e-18  Score=144.02  Aligned_cols=132  Identities=18%  Similarity=0.293  Sum_probs=108.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||||.||..+|.+|+..-.+||+|-.|++...+.....-....                                    
T Consensus       415 ~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnE------------------------------------  458 (563)
T KOG1024|consen  415 HGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNE------------------------------------  458 (563)
T ss_pred             cCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCC------------------------------------
Confidence            79999999999999999899999998887665443322111000                                    


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                     -....||++|.+....|+.++|+||||+++|||+| |+.|+-..+.. .
T Consensus       459 -------------------------------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf-E  506 (563)
T KOG1024|consen  459 -------------------------------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF-E  506 (563)
T ss_pred             -------------------------------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH-H
Confidence                                           13468999999999999999999999999999996 88888766654 4


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .+.+++.+.+..++.+||+++..+|..||...|++||+|.+
T Consensus       507 m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q  547 (563)
T KOG1024|consen  507 MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ  547 (563)
T ss_pred             HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence            55677788888999999999999999999999999999544

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=7.8e-19  Score=160.48  Aligned_cols=146  Identities=24%  Similarity=0.388  Sum_probs=111.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||.|||||++|+++..+|.+||+|||.+............                                       
T Consensus       439 ~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~---------------------------------------  479 (601)
T KOG0590|consen  439 MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH---------------------------------------  479 (601)
T ss_pred             cCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh---------------------------------------
Confidence            69999999999999999999999999987443332221110                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                -...++|+-.|+|||++.+..| ....||||.|++++.|++|+.||.-....+.
T Consensus       480 --------------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~  533 (601)
T KOG0590|consen  480 --------------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN  533 (601)
T ss_pred             --------------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence                                      1124578999999999999887 6779999999999999999999975543322


Q ss_pred             H-HHHH------HhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 L-ANIV------ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~-~~i~------~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      . ..+.      ...+.......++.+.+.+|.+||+.+|.+|.|    ++++++.+||+.++
T Consensus       534 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t----i~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  534 SFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT----IEQILNDEWIRSIE  592 (601)
T ss_pred             chhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec----HHHHhhChHhhhcc
Confidence            2 1110      011111122457888999999999999999999    99999999999876

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.72  E-value=5.8e-18  Score=150.28  Aligned_cols=173  Identities=25%  Similarity=0.363  Sum_probs=126.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .|=+|||||..||++...|.+|++|||.+-.+...                                             
T Consensus       131 ~gk~hRdiKGanilltd~gDvklaDfgvsaqitat---------------------------------------------  165 (829)
T KOG0576|consen  131 QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT---------------------------------------------  165 (829)
T ss_pred             CCcccccccccceeecccCceeecccCchhhhhhh---------------------------------------------
Confidence            46699999999999999999999999987332211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                              ..+.-+|+||+.|||||+-.   ..+|...+|||++|+...||..-+.|.......
T Consensus       166 ------------------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm  221 (829)
T KOG0576|consen  166 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM  221 (829)
T ss_pred             ------------------------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH
Confidence                                    11223679999999999763   455999999999999999999888887666656


Q ss_pred             HHHHHHHHhccCCCCC---CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc-----cccccCCCCCCCC
Q 025601          159 LTLANIVARALEFPKE---PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW-----ALLRCTTPPFVPP  230 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~---~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~-----~~~~~~~~~~~~~  230 (250)
                      ..+.-+-+..+..|..   ..-++.+.+|++.+|.++|++||+    ++.+|.|||+.+---     +.|.+.+-|- |.
T Consensus       222 r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt----aeklL~h~fvs~~l~~rl~~eLLdK~n~P~-~~  296 (829)
T KOG0576|consen  222 RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT----AEKLLQHPFVSQTLSRRLAIELLDKVNNPN-PV  296 (829)
T ss_pred             HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC----hhhheeceeeccchhhHHHHHHHHHccCCC-Cc
Confidence            5665555555554443   235678999999999999999999    999999999986421     2344444333 33


Q ss_pred             CCCcCCCCCCCCCCCCcc
Q 025601          231 PFNRELVSDESCPETPVE  248 (250)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~  248 (250)
                      -+..+....+++...|-+
T Consensus       297 v~~~~d~~~E~~~~i~~~  314 (829)
T KOG0576|consen  297 VRYLEDYDGEDYLWIPMR  314 (829)
T ss_pred             ccccccCCcccccchhhh
Confidence            344555555555555544

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.71  E-value=1.1e-17  Score=162.50  Aligned_cols=93  Identities=18%  Similarity=0.209  Sum_probs=62.8

Q ss_pred             ccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHH----------hccC--CCCCCC
Q 025601          113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH----ELTLANIVA----------RALE--FPKEPA  176 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~----~~~~~~i~~----------~~~~--~p~~~~  176 (250)
                      .+|..|+|||++.+..++.++|||||||++|||++|+.||.....    .....+...          ....  .+....
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  918 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQN  918 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHH
Confidence            477899999999988899999999999999999999999854221    111111100          0000  000111


Q ss_pred             CChHHHHHHHHhcccCccccCCCccChHH
Q 025601          177 VPATAKDLISQLLAKDPERRLGSTKGASA  205 (250)
Q Consensus       177 ~~~~~~~ll~~~L~~dP~~R~t~~~~a~~  205 (250)
                      ...++.+++.+||+.||++||++.+.+++
T Consensus       919 ~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        919 EIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            22356789999999999999995544333

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.69  E-value=2.9e-17  Score=148.88  Aligned_cols=136  Identities=21%  Similarity=0.323  Sum_probs=110.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++++||||-.+|+|+..-.++|+.|||+++....-...-...                                      
T Consensus       817 qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~--------------------------------------  858 (1177)
T KOG1025|consen  817 QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAP--------------------------------------  858 (1177)
T ss_pred             cchhhhhhhhhheeecCCCeEEEEecchhhccCccccccccc--------------------------------------
Confidence            578999999999999999999999999997765432211100                                      


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                   +..-.+.|||-|.+....|+.++||||||+++|||+| |..|+.+..-.+.
T Consensus       859 -----------------------------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI  909 (1177)
T KOG1025|consen  859 -----------------------------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI  909 (1177)
T ss_pred             -----------------------------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh
Confidence                                         0012367999999999999999999999999999996 8999998875544


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASA  205 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~  205 (250)
                       -++++..-+.++++.++-.+..+|.+||..|++.||+|.+.+++
T Consensus       910 -~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~  953 (1177)
T KOG1025|consen  910 -PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE  953 (1177)
T ss_pred             -hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence             45556666688888999999999999999999999997765433

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.68  E-value=9.9e-17  Score=137.61  Aligned_cols=130  Identities=29%  Similarity=0.401  Sum_probs=90.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ..|+|||||..|||+..|+.+-|+||||+.....-....                                         
T Consensus       335 p~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~-----------------------------------------  373 (534)
T KOG3653|consen  335 PPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQG-----------------------------------------  373 (534)
T ss_pred             CccccccccccceEEccCCcEEeeccceeEEecCCCCCc-----------------------------------------
Confidence            369999999999999999999999999996654221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-C-----CchhHHHHHHHHHHHHHhCCCCCC-C
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-H-----GSPVDWWTLGIFLFELFYGVTPFR-G  154 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~~DiwSlG~vl~elltg~~pf~-~  154 (250)
                                                ....-+||.+|||||++-|+- +     -.+.||||+|.|+||++++...+. +
T Consensus       374 --------------------------d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~  427 (534)
T KOG3653|consen  374 --------------------------DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPG  427 (534)
T ss_pred             --------------------------chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence                                      111248999999999998753 2     246899999999999998765442 1


Q ss_pred             C----------------ChHHHHHHHHHhccC--CCCC---CCCChHHHHHHHHhcccCccccCC
Q 025601          155 V----------------DHELTLANIVARALE--FPKE---PAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       155 ~----------------~~~~~~~~i~~~~~~--~p~~---~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      .                +..++.+.++....+  +|..   ..-...+.+.+.-||.-|++-|+|
T Consensus       428 ~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLT  492 (534)
T KOG3653|consen  428 PVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLT  492 (534)
T ss_pred             CCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhh
Confidence            1                122233333333222  1111   123456889999999999999999

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=1.1e-16  Score=139.29  Aligned_cols=140  Identities=30%  Similarity=0.452  Sum_probs=96.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|.||+|+||.||++..++.+||+|||+...+......                                          
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~------------------------------------------  412 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETV------------------------------------------  412 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCCcc------------------------------------------
Confidence            58899999999999999999999999987444332200                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                           .+........+||..||+||++.+..|+.++||||||++|+||+. ....|..   ...
T Consensus       413 ---------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t  468 (516)
T KOG1033|consen  413 ---------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---IAT  468 (516)
T ss_pred             ---------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---HHh
Confidence                                 000011123579999999999999999999999999999999987 3333321   122


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+-++.++.....++ ++-..|++.||.+.|.+||+    +.+.-.|+|.
T Consensus       469 ~~d~r~g~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~----~~~~~~~~~~  515 (516)
T KOG1033|consen  469 LTDIRDGIIPPEFLQDY-PEEYTLLQQLLSPSPEERPS----AIEVALHEFL  515 (516)
T ss_pred             hhhhhcCCCChHHhhcC-cHHHHHHHHhcCCCcccCch----HHHHhhhhhc
Confidence            22232232221011122 33468999999999999997    6666566654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.60  E-value=2.8e-16  Score=130.59  Aligned_cols=117  Identities=31%  Similarity=0.474  Sum_probs=77.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+|++++.+|.++|+||+...........                                          
T Consensus       164 ~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~------------------------------------------  201 (288)
T PF14531_consen  164 YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC------------------------------------------  201 (288)
T ss_dssp             TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG------------------------------------------
T ss_pred             cceEecccceeeEEEcCCCCEEEcChHHHeecCceeec------------------------------------------
Confidence            69999999999999999999999999865332221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--------CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--------EGHGSPVDWWTLGIFLFELFYGVTPFR  153 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~vl~elltg~~pf~  153 (250)
                                                    ...+..|.+||....        ..++.+.|.|+||+++|.|.+|..||.
T Consensus       202 ------------------------------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~  251 (288)
T PF14531_consen  202 ------------------------------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG  251 (288)
T ss_dssp             ------------------------------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred             ------------------------------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence                                          023466888886643        236899999999999999999999997


Q ss_pred             CCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCcccc
Q 025601          154 GVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR  196 (250)
Q Consensus       154 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R  196 (250)
                      ..........      .+..+.++|+..+.||..||+++|.+|
T Consensus       252 ~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  252 LSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             CCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            6542211111      344555899999999999999999988

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.60  E-value=2.4e-15  Score=118.95  Aligned_cols=103  Identities=45%  Similarity=0.723  Sum_probs=85.4

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +|++|+||+|.||+++. ++.++|+|||.+........                                          
T Consensus       111 ~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------  148 (215)
T cd00180         111 NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------------------------------------------  148 (215)
T ss_pred             CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------------------------------------------
Confidence            58999999999999998 89999999998754332211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+...|++||.+... ..+.+.|+|++|++++++              
T Consensus       149 ---------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------  187 (215)
T cd00180         149 ---------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------  187 (215)
T ss_pred             ---------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------
Confidence                                       00012466789999998876 678999999999999998              


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                                         ..+.+++.+|+..+|++||+    +.+++.++
T Consensus       188 -------------------~~~~~~l~~~l~~~p~~R~~----~~~l~~~~  215 (215)
T cd00180         188 -------------------PELKDLIRKMLQKDPEKRPS----AKEILEHL  215 (215)
T ss_pred             -------------------HHHHHHHHHHhhCCcccCcC----HHHHhhCC
Confidence                               78999999999999999999    99988764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.6e-15  Score=129.38  Aligned_cols=131  Identities=25%  Similarity=0.455  Sum_probs=87.8

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      +|.|||||..|||+..+|.+-|+|+|||-......+.                                           
T Consensus       336 aIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~-------------------------------------------  372 (513)
T KOG2052|consen  336 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDT-------------------------------------------  372 (513)
T ss_pred             hhhccccccccEEEccCCcEEEeeceeeEEecccCCc-------------------------------------------
Confidence            5899999999999999999999999998544332211                                           


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---C-C--CchhHHHHHHHHHHHHHhC--------
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---G-H--GSPVDWWTLGIFLFELFYG--------  148 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~-~--~~~~DiwSlG~vl~elltg--------  148 (250)
                                            .+...+..+||.+|||||++-..   . +  -..+||||||.|+||++-+        
T Consensus       373 ----------------------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~e  430 (513)
T KOG2052|consen  373 ----------------------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVE  430 (513)
T ss_pred             ----------------------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEeh
Confidence                                  12233345899999999998542   1 1  2458999999999998732        


Q ss_pred             --CCCCCCCC----hHHHHHHHH-HhccC--CCCCCCCC---hHHHHHHHHhcccCccccCC
Q 025601          149 --VTPFRGVD----HELTLANIV-ARALE--FPKEPAVP---ATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       149 --~~pf~~~~----~~~~~~~i~-~~~~~--~p~~~~~~---~~~~~ll~~~L~~dP~~R~t  198 (250)
                        +.||.+.-    ..+.+.+++ ....+  +|....-.   ..+..+|+-||.-+|.-|.|
T Consensus       431 ey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRlt  492 (513)
T KOG2052|consen  431 EYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLT  492 (513)
T ss_pred             hhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhH
Confidence              46775432    223333322 11111  11111111   33567899999999999999

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.51  E-value=6.4e-14  Score=130.53  Aligned_cols=123  Identities=41%  Similarity=0.825  Sum_probs=109.3

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-CCCChHHHHHHHHhc
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-PAVPATAKDLISQLL  189 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-~~~~~~~~~ll~~~L  189 (250)
                      ..++|+.|.+||.+.+...+..+|+|++|+++++.++|..||........+.+|+.....+|.- ...+.+.++++.+.|
T Consensus       994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLL 1073 (1205)
T ss_pred             cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhh
Confidence            4579999999999999999999999999999999999999999999999999998887776553 346888999999999


Q ss_pred             ccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCc
Q 025601          190 AKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNR  234 (250)
Q Consensus       190 ~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~  234 (250)
                      ..++.+|..+.. +.++..|+||+.++|..+....-+++|++...
T Consensus      1074 ~~~~~qr~~a~~-~~e~k~~~~~~~~~~~~l~~q~~~~~p~~~s~ 1117 (1205)
T KOG0606|consen 1074 TEEPTQRLGAKG-AAEVKGHPFFQDVDWENLALQKAEFVPQPEST 1117 (1205)
T ss_pred             ccCchhccCccc-ccccccCCccCCCCccccccccCccCCCCCCC
Confidence            999999999443 45889999999999999999998999998753

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.51  E-value=3.3e-14  Score=114.36  Aligned_cols=99  Identities=41%  Similarity=0.726  Sum_probs=74.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|++|+||+|.||+++.++.++|+|||++.........                                          
T Consensus       117 ~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~------------------------------------------  154 (225)
T smart00221      117 LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA------------------------------------------  154 (225)
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc------------------------------------------
Confidence            58999999999999999999999999987554322100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCcee-cCCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRG-VDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~vl~elltg~~pf~~-~~~~~  159 (250)
                                                ......++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .....
T Consensus       155 --------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~  208 (225)
T smart00221      155 --------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTS  208 (225)
T ss_pred             --------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHH
Confidence                                      00012467789999998 555678899999999999999999999987 55554


Q ss_pred             HHHHHHHhc
Q 025601          160 TLANIVARA  168 (250)
Q Consensus       160 ~~~~i~~~~  168 (250)
                      .+.+.+...
T Consensus       209 ~~~~~~~~~  217 (225)
T smart00221      209 LLSDVWSFG  217 (225)
T ss_pred             HHHHHHhcC
Confidence            544444433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.49  E-value=7.1e-15  Score=129.10  Aligned_cols=82  Identities=43%  Similarity=0.743  Sum_probs=69.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||||||||-+|+.++.+|.+||.|||.+-....                                              
T Consensus       689 ~~ivhrdikdenvivd~~g~~klidfgsaa~~ks----------------------------------------------  722 (772)
T KOG1152|consen  689 QGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS----------------------------------------------  722 (772)
T ss_pred             cCceecccccccEEEecCCeEEEeeccchhhhcC----------------------------------------------
Confidence            5899999999999999999999999997622111                                              


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRG  154 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~  154 (250)
                                               -....|+||..|.|||++.|.+| +...|||++|+++|.++....||..
T Consensus       723 -------------------------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  723 -------------------------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             -------------------------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence                                     01124789999999999999987 8889999999999999999988854

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=5e-14  Score=119.27  Aligned_cols=144  Identities=27%  Similarity=0.434  Sum_probs=96.9

Q ss_pred             CccceeecCCCCcEEeCCC--C--CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD--G--HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~--~--~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +|||.|||+|.+|||+.-+  +  .+.++|||.+-......-.....+..                              
T Consensus       359 ~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~------------------------------  408 (598)
T KOG4158|consen  359 KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDE------------------------------  408 (598)
T ss_pred             HccchhhcccccceEEEecCCCCcEEEEcccceeeecccccccccccccc------------------------------
Confidence            4899999999999999633  2  58999999874433221111110000                              


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC------CCchhHHHHHHHHHHHHHhCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG------HGSPVDWWTLGIFLFELFYGVT  150 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~vl~elltg~~  150 (250)
                                                  +     ..-|.-..||||+....+      --.++|.|+.|.+.||++....
T Consensus       409 ----------------------------V-----d~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~N  455 (598)
T KOG4158|consen  409 ----------------------------V-----DLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSN  455 (598)
T ss_pred             ----------------------------c-----cCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCC
Confidence                                        0     113566789999876432      1467999999999999999999


Q ss_pred             CCCCCChHHH-HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          151 PFRGVDHELT-LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       151 pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ||.+...... .+..-+.+. .+.++.++..+++++..+|+.||.+|++ +.+|..+|+-
T Consensus       456 PFY~rGem~L~~r~Yqe~qL-Palp~~vpp~~rqlV~~lL~r~pskRvs-p~iAANvl~L  513 (598)
T KOG4158|consen  456 PFYKRGEMLLDTRTYQESQL-PALPSRVPPVARQLVFDLLKRDPSKRVS-PNIAANVLNL  513 (598)
T ss_pred             cccccchheechhhhhhhhC-CCCcccCChHHHHHHHHHhcCCccccCC-ccHHHhHHHH
Confidence            9987442211 111222222 2445679999999999999999999998 4445555543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.49  E-value=1.7e-13  Score=114.92  Aligned_cols=146  Identities=38%  Similarity=0.594  Sum_probs=102.3

Q ss_pred             ccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .|++||||||+||+++..+ .+++.|||++.............                                     
T Consensus       120 ~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~-------------------------------------  162 (384)
T COG0515         120 KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIP-------------------------------------  162 (384)
T ss_pred             CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccccc-------------------------------------
Confidence            5799999999999999888 79999999886322211100000                                     


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                .......+|..|++||.+.+   .......|+||+|++++++++|..||.....
T Consensus       163 --------------------------~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         163 --------------------------ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             --------------------------ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence                                      01123478999999999988   4679999999999999999999999887764


Q ss_pred             ----HHHHHHHHHhccC-CCCCCC--C----ChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 ----ELTLANIVARALE-FPKEPA--V----PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 ----~~~~~~i~~~~~~-~p~~~~--~----~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                          ......+...... ......  .    ...+.+++.+++..+|..|.+    ......+++...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~  280 (384)
T COG0515         217 SSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS----SSSDLSHDLLAH  280 (384)
T ss_pred             cccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC----HHHHhhchHhhC
Confidence                3333333333222 111111  1    157899999999999999999    666555544443

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.48  E-value=1.7e-14  Score=116.46  Aligned_cols=140  Identities=24%  Similarity=0.335  Sum_probs=91.9

Q ss_pred             CccceeecCCCCcEEeC-CC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVR-SD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~-~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      ++++||||||.+||||- .+ -.+||||||+.........                                        
T Consensus       139 sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~----------------------------------------  178 (378)
T KOG1345|consen  139 SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVK----------------------------------------  178 (378)
T ss_pred             ccchhhcccccceEEEecCCccEEEeeecccccccCceeh----------------------------------------
Confidence            46899999999999995 33 4799999998744322110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CC--CCchhHHHHHHHHHHHHHhCCCCCC
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EG--HGSPVDWWTLGIFLFELFYGVTPFR  153 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~--~~~~~DiwSlG~vl~elltg~~pf~  153 (250)
                                                      ..-.+..|.+||++..   ..  .....|||.||++++.+++|..||.
T Consensus       179 --------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  179 --------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             --------------------------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence                                            0123567889987643   22  3778999999999999999999997


Q ss_pred             CCChHH----HHHHHHHhcc-CCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          154 GVDHEL----TLANIVARAL-EFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       154 ~~~~~~----~~~~i~~~~~-~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      ......    .+.+-..+.. ..|. -.-+++.+..+.++-|..++++|.-..+ +++...--|.+
T Consensus       227 ka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~-~kk~rk~~w~E  291 (378)
T KOG1345|consen  227 KASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT-AKKMRKCLWKE  291 (378)
T ss_pred             hhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH-HHHHHHHHHHH
Confidence            543221    1222212111 1121 1346888999999999999999944222 44444444544

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.46  E-value=2.1e-14  Score=134.12  Aligned_cols=135  Identities=24%  Similarity=0.293  Sum_probs=89.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+|+|||.+|||+++=+.+.|.||...|..--..++                                          
T Consensus       139 ~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN------------------------------------------  176 (1431)
T KOG1240|consen  139 LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN------------------------------------------  176 (1431)
T ss_pred             cCccccccccceEEEeeechhhhhcccccCCccCCCCC------------------------------------------
Confidence            69999999999999999999999999865432111111                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC----------CC-CCchhHHHHHHHHHHHHHh-CC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG----------EG-HGSPVDWWTLGIFLFELFY-GV  149 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~-~~~~~DiwSlG~vl~ellt-g~  149 (250)
                                    +.+-...-      ..-..-.+|+|||.+..          .. .+++.||||+||+++||++ |+
T Consensus       177 --------------Padf~fFF------DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~  236 (1431)
T KOG1240|consen  177 --------------PADFTFFF------DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR  236 (1431)
T ss_pred             --------------cccceEEE------ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence                          00000000      00023358999998754          22 5788999999999999974 78


Q ss_pred             CCCCCCChHHHHHHHHHhccC------CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          150 TPFRGVDHELTLANIVARALE------FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       150 ~pf~~~~~~~~~~~i~~~~~~------~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ++|.-       .++.+....      +....-....++++|..|++.||.+|.+    |++.|+.
T Consensus       237 PlF~L-------SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlS----AedyL~~  291 (1431)
T KOG1240|consen  237 PLFTL-------SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLS----AEDYLQK  291 (1431)
T ss_pred             CcccH-------HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccC----HHHHHHh
Confidence            88831       111111000      0000112347899999999999999999    9988875

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.39  E-value=1.5e-12  Score=111.52  Aligned_cols=139  Identities=20%  Similarity=0.258  Sum_probs=97.0

Q ss_pred             CccceeecCCCCcEEeCCC-----CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD-----GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-----~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      +.|+|||||||.|+++...     ..+.|.|||+++..............                              
T Consensus       140 ~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~------------------------------  189 (322)
T KOG1164|consen  140 SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRP------------------------------  189 (322)
T ss_pred             hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCccccc------------------------------
Confidence            3699999999999999865     35899999999743322111100000                              


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   .......+.||..|+++.+..+...+.+.|+||++.++.+++.|..||.+.
T Consensus       190 -----------------------------~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  190 -----------------------------PRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             -----------------------------CCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence                                         000012457999999999999999999999999999999999999999877


Q ss_pred             ChHHHHHHHHHhccCC--C-CCCCCChHHHHHHHHhcccCccccCC
Q 025601          156 DHELTLANIVARALEF--P-KEPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~--p-~~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      .......++.......  . .....+.++..++..+-..+...+|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pd  286 (322)
T KOG1164|consen  241 EMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPD  286 (322)
T ss_pred             cccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCC
Confidence            6443333322221111  1 22345677888888887788888888

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.37  E-value=4.2e-13  Score=106.89  Aligned_cols=135  Identities=21%  Similarity=0.288  Sum_probs=101.8

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +++|||||||+|+|+..   ...+.|.||||++...+......+.-..                                
T Consensus       130 r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre--------------------------------  177 (341)
T KOG1163|consen  130 RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYRE--------------------------------  177 (341)
T ss_pred             hccccccCCccceeeccccccceEEEEeccchhhhccccccccCcccc--------------------------------
Confidence            58999999999999974   4678999999998877665544332211                                


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-  157 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~-  157 (250)
                                                    ...+.||.+|.+-....+...+..-|+=|+|.++.++.-|..||.|... 
T Consensus       178 ------------------------------~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  178 ------------------------------DRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             ------------------------------CCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence                                          1135799999998888877788999999999999999999999998753 


Q ss_pred             --HHHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCC
Q 025601          158 --ELTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       158 --~~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                        .+..++|.+.....+.   +..+|.++...+..|-..--++-|.
T Consensus       228 tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd  273 (341)
T KOG1163|consen  228 TKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD  273 (341)
T ss_pred             hHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence              3446666665554433   4778999988888886655555554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.23  E-value=1.9e-11  Score=101.61  Aligned_cols=125  Identities=21%  Similarity=0.369  Sum_probs=91.7

Q ss_pred             ccceeecCCCCcEEeCCC-----CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD-----GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~-----~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +.+|.|||||+|+||...     ..+.+.|||+|+...+......+.-...                             
T Consensus       143 k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~-----------------------------  193 (449)
T KOG1165|consen  143 KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREH-----------------------------  193 (449)
T ss_pred             cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccc-----------------------------
Confidence            678999999999999854     3589999999988777655443321100                             


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                       -+..||.+||+-....|+..+.+-|+=|||=|+.+.|-|..||.|..
T Consensus       194 ---------------------------------KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  194 ---------------------------------KSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             ---------------------------------cccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence                                             03469999999999999999999999999999999999999999864


Q ss_pred             ---hHHHHHHHHHhccCCCC---CCCCChHHHHHHHHh
Q 025601          157 ---HELTLANIVARALEFPK---EPAVPATAKDLISQL  188 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~  188 (250)
                         +.+.+++|-+.....+.   +.++|.++..-|.-.
T Consensus       241 A~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yv  278 (449)
T KOG1165|consen  241 ADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYV  278 (449)
T ss_pred             CcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHH
Confidence               55566666554433332   245565655444443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.18  E-value=4.6e-12  Score=116.27  Aligned_cols=143  Identities=25%  Similarity=0.434  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .|+.|+||||+|.+++.++ .++++|||++.........                                         
T Consensus       143 ~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~-----------------------------------------  181 (601)
T KOG0590|consen  143 NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGA-----------------------------------------  181 (601)
T ss_pred             cccccCCCCCccchhccCCCcccCCCchhhccccccCCc-----------------------------------------
Confidence            4899999999999999999 9999999998554431100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCccc-CCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVG-THEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                               .......+| ++.|+|||...+.. .....|+||.|+++..+++|..|+......
T Consensus       182 -------------------------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~  236 (601)
T KOG0590|consen  182 -------------------------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK  236 (601)
T ss_pred             -------------------------ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccc
Confidence                                     001112356 89999999999854 488899999999999999999999765433


Q ss_pred             HH--HHHHHHh-ccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LT--LANIVAR-ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~--~~~i~~~-~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..  ...+-.. ......-..++....+++.+++..+|..|.+    .+++..+||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s----~~~~~~d~~~~~  291 (601)
T KOG0590|consen  237 DGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS----IEELKLDNWLSS  291 (601)
T ss_pred             cccceeecccccccccCccccCChhhhhcccccccCCchhccc----cccccccccccc
Confidence            32  1112121 1123334567889999999999999999999    999999999988

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.12  E-value=2.4e-10  Score=92.90  Aligned_cols=90  Identities=19%  Similarity=0.309  Sum_probs=79.1

Q ss_pred             ccCCCCCCCceecCCCC---CchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhc
Q 025601          113 VGTHEYLAPEIVSGEGH---GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLL  189 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~~~---~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L  189 (250)
                      .-.+.||+||.++..+.   -.++|+|||++++|||.|+..||...+..+.-.+|.-.+.....++.++...-.||.-|+
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icm  426 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICM  426 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHh
Confidence            34689999999987652   467999999999999999999999999998888888777777777889999999999999


Q ss_pred             ccCccccCCCccC
Q 025601          190 AKDPERRLGSTKG  202 (250)
Q Consensus       190 ~~dP~~R~t~~~~  202 (250)
                      ..||.+||.|..+
T Consensus       427 nedpgkrpkfdmi  439 (448)
T KOG0195|consen  427 NEDPGKRPKFDMI  439 (448)
T ss_pred             cCCCCcCCCccee
Confidence            9999999997654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=1.2e-10  Score=105.05  Aligned_cols=156  Identities=21%  Similarity=0.374  Sum_probs=111.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      -++||++|.|++|+++.++.+||+.|+.+........  ....           .+                        
T Consensus       119 Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--~p~~-----------~y------------------------  161 (700)
T KOG2137|consen  119 AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--YPFS-----------EY------------------------  161 (700)
T ss_pred             cceeecccchhheeeccCcceeeccchhhhccCCCCc--cccc-----------cC------------------------
Confidence            5799999999999999999999999987633222111  0000           00                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccC-CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHH-hCCCCCCCCC--h
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSM-SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVD--H  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ell-tg~~pf~~~~--~  157 (250)
                                              +.+.. ......-|.|||++.+..-+.++|++|+||++|.+. .|+..+....  .
T Consensus       162 ------------------------d~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~  217 (700)
T KOG2137|consen  162 ------------------------DPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL  217 (700)
T ss_pred             ------------------------CCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcc
Confidence                                    00000 012346799999999977899999999999999998 5666554432  2


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~  222 (250)
                      .............+....++|.++.+-|.++|..+..-||+    +..++..|||.+..-.+|+-
T Consensus       218 ~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~----~~~l~~~~ff~D~~~~aLrf  278 (700)
T KOG2137|consen  218 SYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT----LDLLLSIPFFSDPGLKALRF  278 (700)
T ss_pred             hhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcc----hhhhhcccccCCchhhhhhh
Confidence            22333333333344445789999999999999999999998    99999999999987666544

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.92  E-value=1.5e-09  Score=96.24  Aligned_cols=130  Identities=21%  Similarity=0.306  Sum_probs=89.2

Q ss_pred             eeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccccCc
Q 025601            5 VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFRP   84 (250)
Q Consensus         5 iHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (250)
                      .|+.++..|.+++....+||.|||+..........     .                                       
T Consensus        71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~-----~---------------------------------------  106 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEP-----E---------------------------------------  106 (484)
T ss_pred             eeeeeccccceeeeeEEEEechhhhcccccccccc-----c---------------------------------------
Confidence            89999999999999999999999986443220000     0                                       


Q ss_pred             cccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-------CCchhHHHHHHHHHHHHHhCCCCCCCCC-
Q 025601           85 KRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-------HGSPVDWWTLGIFLFELFYGVTPFRGVD-  156 (250)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~DiwSlG~vl~elltg~~pf~~~~-  156 (250)
                      ..+                       ...-...|.|||.+.+..       .+.+.||||+|++++|++++..||.... 
T Consensus       107 ~~~-----------------------~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~  163 (484)
T KOG1023|consen  107 AHH-----------------------PIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNL  163 (484)
T ss_pred             ccc-----------------------hhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccc
Confidence            000                       001235789999988641       3677999999999999999999997633 


Q ss_pred             ---hHHHHHHHHHhccCCCCC-----CCCChHHHHHHHHhcccCccccCCCcc
Q 025601          157 ---HELTLANIVARALEFPKE-----PAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~~p~~-----~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                         ..+....+.+.......+     ...++.+..++..||..+|.+||++..
T Consensus       164 ~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~  216 (484)
T KOG1023|consen  164 VEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQ  216 (484)
T ss_pred             cCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHH
Confidence               222333333312211111     134567999999999999999999655

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.81  E-value=5.4e-09  Score=83.31  Aligned_cols=35  Identities=34%  Similarity=0.545  Sum_probs=30.8

Q ss_pred             CccceeecC-CCCcEEeCCCCCeeeccccCCccCCC
Q 025601            1 MLGIVYRDL-KPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         1 ~~giiHrDI-Kp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      ++||+|||| ||.||+++.+|.++|+|||++.....
T Consensus       109 ~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274        109 RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            369999999 79999999999999999999975443

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.80  E-value=3.7e-09  Score=94.09  Aligned_cols=147  Identities=24%  Similarity=0.263  Sum_probs=110.1

Q ss_pred             ccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      .+|+|-|+||.||++..+ ..++++|||+...+....-........                                  
T Consensus       241 ~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~----------------------------------  286 (524)
T KOG0601|consen  241 NNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSK----------------------------------  286 (524)
T ss_pred             CcccccccchhheecccccceeecCCcceeEEccCCccccceeeee----------------------------------
Confidence            579999999999999998 889999999987766543221111000                                  


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--ChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV--DHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~--~~~  158 (250)
                                                    .-.+...|++||.+.+. ++...|++++|.++.+..++..++...  +.+
T Consensus       287 ------------------------------r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W  335 (524)
T KOG0601|consen  287 ------------------------------RPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSW  335 (524)
T ss_pred             ------------------------------cCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCc
Confidence                                          00355689999988776 688999999999999999998888766  455


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      ..+.++.   .+...+...+..+...+..|++.++-.|++    +..+++|++++.....++
T Consensus       336 ~~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~----~q~~~~l~~i~s~~~~~~  390 (524)
T KOG0601|consen  336 SQLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLT----AQILTALNVIHSKLFVHL  390 (524)
T ss_pred             ccccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhH----HHHHhccccccchhhhcc
Confidence            5544432   222233455677777999999999999999    999999999997765444

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.72  E-value=7.9e-09  Score=89.54  Aligned_cols=35  Identities=37%  Similarity=0.545  Sum_probs=31.2

Q ss_pred             CccceeecC-CCCcEEeCCCCCeeeccccCCccCCC
Q 025601            1 MLGIVYRDL-KPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         1 ~~giiHrDI-Kp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      ++||+|||| ||+|||++.++.+||+|||+++....
T Consensus       129 ~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188        129 RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             HCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            369999999 99999999999999999999976543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.70  E-value=8.2e-09  Score=97.93  Aligned_cols=82  Identities=22%  Similarity=0.370  Sum_probs=64.8

Q ss_pred             ccceeecCCCCcEEeCC-------CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCC
Q 025601            2 LGIVYRDLKPENVLVRS-------DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNC   74 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (250)
                      +||||+||||+|+||..       +.-++|+|||.+..|.-....                                   
T Consensus       813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~-----------------------------------  857 (974)
T KOG1166|consen  813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG-----------------------------------  857 (974)
T ss_pred             cceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC-----------------------------------
Confidence            68999999999999963       235899999987555433221                                   


Q ss_pred             CCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCC
Q 025601           75 IVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVT  150 (250)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~  150 (250)
                                                      ....+..+|-.+-++|+..|++|+..+|.|.++.+++.||.|++
T Consensus       858 --------------------------------~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  858 --------------------------------TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             --------------------------------cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence                                            11123457788999999999999999999999999999999864

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.68  E-value=2.9e-09  Score=86.23  Aligned_cols=31  Identities=23%  Similarity=0.306  Sum_probs=27.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      +.||+||||||+||+++.+| ++|+|||....
T Consensus       153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~  183 (232)
T PRK10359        153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRC  183 (232)
T ss_pred             HcCCccCCCChHHEEEeCCC-EEEEECCCccc
Confidence            36999999999999999888 99999997643

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.50  E-value=1.4e-07  Score=78.82  Aligned_cols=95  Identities=17%  Similarity=0.198  Sum_probs=65.2

Q ss_pred             cCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccC
Q 025601          114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-LTLANIVARALEFPKEPAVPATAKDLISQLLAKD  192 (250)
Q Consensus       114 gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~d  192 (250)
                      +-++|.+||.-.....+.++|||+||+...+|..+..--...... ..-..+.. ... ..   ....-.+++.+||+-.
T Consensus       244 ~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~-~i~-~l---en~lqr~~i~kcl~~e  318 (458)
T KOG1266|consen  244 SLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIAN-VII-GL---ENGLQRGSITKCLEGE  318 (458)
T ss_pred             cCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhh-hee-ec---cCccccCcCcccccCC
Confidence            457889999776666788999999999999998877643222211 11111211 111 01   1122356889999999


Q ss_pred             ccccCCCccChHHHhcCCCCCCCCc
Q 025601          193 PERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       193 P~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      |+.||+    +++++.||.+-+|..
T Consensus       319 P~~rp~----ar~llfHpllfeVhs  339 (458)
T KOG1266|consen  319 PNGRPD----ARLLLFHPLLFEVHS  339 (458)
T ss_pred             CCCCcc----hhhhhcCceeeecch
Confidence            999999    999999999777754

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.04  E-value=2.4e-06  Score=70.11  Aligned_cols=34  Identities=32%  Similarity=0.466  Sum_probs=30.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCC
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD   34 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~   34 (250)
                      ++||+||||||.|||++.++.++|+|||.+....
T Consensus       160 ~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        160 DAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            3799999999999999998999999999886654

>smart00090 RIO RIO-like kinase

Probab=97.87  E-value=6.6e-06  Score=67.46  Aligned_cols=35  Identities=34%  Similarity=0.556  Sum_probs=30.2

Q ss_pred             cc-ceeecCCCCcEEeCCCCCeeeccccCCccCCCCc
Q 025601            2 LG-IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSA   37 (250)
Q Consensus         2 ~g-iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~   37 (250)
                      +| |+||||||+||+++ ++.++|+|||++.......
T Consensus       167 ~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      167 EGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             cCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcc
Confidence            57 99999999999998 8899999999987655443

>PRK10345 hypothetical protein; Provisional

Probab=97.76  E-value=1.2e-05  Score=64.72  Aligned_cols=33  Identities=24%  Similarity=0.103  Sum_probs=25.7

Q ss_pred             CccceeecCCCCcEEeCCC----CCeeeccccCCccC
Q 025601            1 MLGIVYRDLKPENVLVRSD----GHIMLTDFDLSLKC   33 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~----~~~kl~dfgl~~~~   33 (250)
                      ++|||||||||+|||++..    +.++|+||+-+...
T Consensus       123 ~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345        123 DNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            4799999999999999742    37999995444333

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.75  E-value=1.6e-05  Score=71.26  Aligned_cols=84  Identities=21%  Similarity=0.244  Sum_probs=57.8

Q ss_pred             CCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC
Q 025601          120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS  199 (250)
Q Consensus       120 aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~  199 (250)
                      ++.......+..++|++|||..+.+.+++...-....   +...|..+  ..+.......+++.+...|+..++..|+. 
T Consensus       434 ~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---~~~~i~~~--~~p~~~~~~~~~q~~~kv~~~~~~~~~~l-  507 (524)
T KOG0601|consen  434 AEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV---QSLTIRSG--DTPNLPGLKLQLQVLLKVMINPDRKRRPS-  507 (524)
T ss_pred             chhhccccccccccccccccccccccccCcccCcccc---cceeeecc--cccCCCchHHhhhhhhhhhcCCccccchh-
Confidence            3433344557899999999999999999875443322   22223233  23334455688999999999999999998 


Q ss_pred             ccChHHHhcCCCC
Q 025601          200 TKGASAIKHHPFF  212 (250)
Q Consensus       200 ~~~a~~ll~hp~~  212 (250)
                         +.++..|.=|
T Consensus       508 ---~~~l~~~~~~  517 (524)
T KOG0601|consen  508 ---AVELSLHSEF  517 (524)
T ss_pred             ---hhhhcccchh
Confidence               7777766544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.55  E-value=4.8e-05  Score=60.29  Aligned_cols=31  Identities=42%  Similarity=0.645  Sum_probs=28.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC   33 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~   33 (250)
                      .||+|+|++|.||+++ ++.+++.|||++...
T Consensus       109 ~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724       109 AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            6899999999999998 899999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.53  E-value=3.7e-05  Score=70.54  Aligned_cols=33  Identities=39%  Similarity=0.560  Sum_probs=29.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCC
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD   34 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~   34 (250)
                      ++||+||||||+||++ .++.++|+|||+++...
T Consensus       446 ~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~  478 (535)
T PRK09605        446 KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             hCCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence            3689999999999999 67899999999997753

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.53  E-value=5.2e-05  Score=60.62  Aligned_cols=30  Identities=37%  Similarity=0.595  Sum_probs=27.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      +|++|+|++|.||+++ ++.++|+|||++..
T Consensus       114 ~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        114 AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            6899999999999998 88999999998865

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.49  E-value=0.0005  Score=60.09  Aligned_cols=88  Identities=22%  Similarity=0.397  Sum_probs=56.9

Q ss_pred             ccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChH-----HHHHHHHHh---------ccCCC
Q 025601          113 VGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYG-VTPFRGVDHE-----LTLANIVAR---------ALEFP  172 (250)
Q Consensus       113 ~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg-~~pf~~~~~~-----~~~~~i~~~---------~~~~p  172 (250)
                      +|...|.+||.-.     +..-+...|.|-||+++++|+.| ++||.|....     -.-..|..+         .+..|
T Consensus       177 Vg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p  256 (637)
T COG4248         177 VGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKP  256 (637)
T ss_pred             cCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCC
Confidence            6788999999643     33346778999999999999876 9999875311     000112211         11111


Q ss_pred             CC-----CCCChHHHHHHHHhcccC--ccccCCCc
Q 025601          173 KE-----PAVPATAKDLISQLLAKD--PERRLGST  200 (250)
Q Consensus       173 ~~-----~~~~~~~~~ll~~~L~~d--P~~R~t~~  200 (250)
                      .+     .-+++.++.+...|+...  +.-|||..
T Consensus       257 ~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         257 PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence            11     235688899999998764  45799844

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.46  E-value=8.4e-05  Score=66.42  Aligned_cols=34  Identities=32%  Similarity=0.556  Sum_probs=31.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      .|++|+|++|.||+++.+|.+++.|||++.....
T Consensus       276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            6999999999999999999999999999877654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.38  E-value=0.00057  Score=62.54  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=27.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      ++++|++|.-+.|+++..|.+||++|.++.
T Consensus       124 ~~lvHgNv~~~SVfVn~~GeWkLggle~v~  153 (690)
T KOG1243|consen  124 CNLVHGNVCKDSVFVNESGEWKLGGLELVS  153 (690)
T ss_pred             CCeeeccEeeeeEEEcCCCcEEEeeeEEEe
Confidence            689999999999999999999999998763

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.19  E-value=0.00022  Score=54.80  Aligned_cols=29  Identities=31%  Similarity=0.442  Sum_probs=25.9

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      +++|+|++|.||+++ ++.+++.||+.+..
T Consensus       108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             eeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            579999999999998 77899999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.04  E-value=0.00028  Score=64.35  Aligned_cols=34  Identities=24%  Similarity=0.388  Sum_probs=30.5

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~   35 (250)
                      .|++|+|+||.||+++.+|    .+++.|||++.....
T Consensus       279 ~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        279 DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            6999999999999999887    999999999876644

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.97  E-value=0.00051  Score=53.60  Aligned_cols=30  Identities=33%  Similarity=0.499  Sum_probs=26.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .||||+||.++||++..++ +.+.||||++.
T Consensus       111 ~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         111 AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            5999999999999996554 99999999864

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.61  E-value=0.0015  Score=51.50  Aligned_cols=32  Identities=31%  Similarity=0.499  Sum_probs=24.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccC
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKC   33 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~   33 (250)
                      ..||||+||.+.||+++.+ .+.+.|||.+...
T Consensus       125 ~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  125 KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             CTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             hcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence            3699999999999999776 9999999976443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.24  E-value=0.0025  Score=51.01  Aligned_cols=34  Identities=35%  Similarity=0.455  Sum_probs=29.6

Q ss_pred             ccceeecCCCCcEEeCCCC---CeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG---HIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~---~~kl~dfgl~~~~~~   35 (250)
                      .||+|+|+++.|||++.++   .+.|.||+.++....
T Consensus       137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~  173 (206)
T PF06293_consen  137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPS  173 (206)
T ss_pred             CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCC
Confidence            6999999999999999877   799999998766543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.22  E-value=0.0025  Score=53.24  Aligned_cols=31  Identities=23%  Similarity=0.180  Sum_probs=26.9

Q ss_pred             ccceeecCCCCcEEeCC-------CCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-------DGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-------~~~~kl~dfgl~~~   32 (250)
                      .||+|+|++++|||++.       +..+.|+||+.++.
T Consensus       157 ~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        157 AGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            69999999999999975       35789999998754

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.96  E-value=0.0049  Score=48.27  Aligned_cols=30  Identities=47%  Similarity=0.682  Sum_probs=25.2

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~   31 (250)
                      .+|||+||..+||++..++.   ..+.|||++.
T Consensus       132 ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  132 NDIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             CCeecccccccceEEecCCCcCceEEEeecchh
Confidence            47999999999999986643   4899999873

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.33  E-value=0.01  Score=49.21  Aligned_cols=27  Identities=44%  Similarity=0.660  Sum_probs=25.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeecccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFD   28 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfg   28 (250)
                      .||||+|+.+-||+++.+|.+.+.||-
T Consensus       221 ~GiVHGDlSefNIlV~~dg~~~vIDwP  247 (304)
T COG0478         221 RGIVHGDLSEFNILVTEDGDIVVIDWP  247 (304)
T ss_pred             cCccccCCchheEEEecCCCEEEEeCc
Confidence            699999999999999999999999995

>PRK05231 homoserine kinase; Provisional

Probab=94.56  E-value=0.024  Score=48.42  Aligned_cols=31  Identities=29%  Similarity=0.391  Sum_probs=26.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .|+||+|+.+.||+++.+...-+.||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            4899999999999998666668999997743

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=94.14  E-value=0.036  Score=45.17  Aligned_cols=31  Identities=26%  Similarity=0.191  Sum_probs=25.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++.++...|.||+.+..
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            3689999999999998666667999997633

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=94.07  E-value=0.025  Score=51.03  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=59.1

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-----------CCCChHHHHHHHHhcccCccccCC
Q 025601          130 GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-----------PAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       130 ~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-----------~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      ++++||||+|.++.++.-|...+......+.+..+.+-. ..+..           ..++.....+..+|+...|..||.
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~-~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYY-TDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            468999999999999999988887776666665554422 11111           234566778999999999999998


Q ss_pred             CccChHHHhcCCCCCCC
Q 025601          199 STKGASAIKHHPFFQGV  215 (250)
Q Consensus       199 ~~~~a~~ll~hp~~~~~  215 (250)
                          -.++..++-|..+
T Consensus       188 ----~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  188 ----PMELSKRCSFTEV  200 (725)
T ss_pred             ----hhHHhcCccHHHH
Confidence                6667777766654

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.01  E-value=0.0072  Score=60.83  Aligned_cols=80  Identities=15%  Similarity=-0.019  Sum_probs=62.9

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccccC
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCFR   83 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (250)
                      .+|+++|+-|.+|..+-.++++++|+.+-..+....                                            
T Consensus      1361 ~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf-------------------------------------------- 1396 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF-------------------------------------------- 1396 (2724)
T ss_pred             chhhhhhhhccceecCCcccccccccccccCchHhh--------------------------------------------
Confidence            578999999999999999999999998722222111                                            


Q ss_pred             ccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCC
Q 025601           84 PKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF  152 (250)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf  152 (250)
                                               .....+++.|+.++....-.++.++|+|..|+.+|++-.|..+|
T Consensus      1397 -------------------------~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1397 -------------------------FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             -------------------------hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence                                     11235677888898888877888899999999999998887776

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.97  E-value=0.038  Score=46.95  Aligned_cols=30  Identities=33%  Similarity=0.491  Sum_probs=26.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .|+||+|+.+.||+++.++...|.||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            589999999999999988877899999763

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.97  E-value=0.041  Score=44.64  Aligned_cols=31  Identities=13%  Similarity=0.268  Sum_probs=26.7

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++. ++.+.|.||..+..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence            36899999999999997 57899999987744

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=93.75  E-value=0.031  Score=44.77  Aligned_cols=29  Identities=41%  Similarity=0.638  Sum_probs=20.3

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCC
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~   30 (250)
                      .+++|+|+.+.||+++ .++.+-|.||+.+
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             cEEEEeccccccceeeeccceeEEEecccc
Confidence            4689999999999999 5666689999876

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=93.74  E-value=0.047  Score=44.12  Aligned_cols=31  Identities=26%  Similarity=0.225  Sum_probs=25.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+|+.|+|+.|.|+++.. +.+.+.||+..+.
T Consensus       153 ~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~~  183 (229)
T PF06176_consen  153 KHGFYHGDPHPGNFLVSN-NGIRIIDTQGKRM  183 (229)
T ss_pred             HcCCccCCCCcCcEEEEC-CcEEEEECccccc
Confidence            379999999999999974 4589999986544

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.72  E-value=0.049  Score=46.07  Aligned_cols=31  Identities=23%  Similarity=0.386  Sum_probs=26.8

Q ss_pred             ccceeecCCCCcEEeCCC----CCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSD----GHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~----~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++.+    +.+.+.||..+..
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            368999999999999874    8899999998744

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.30  E-value=0.051  Score=45.74  Aligned_cols=30  Identities=30%  Similarity=0.388  Sum_probs=26.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .+++|+|+.|.||+++.++...|.||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            479999999999999987778899998763

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.84  E-value=0.075  Score=43.41  Aligned_cols=29  Identities=14%  Similarity=0.012  Sum_probs=25.7

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .++|+|+.|.||+++.++...|.||+.+.
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            58999999999999987778899998763

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.58  E-value=0.089  Score=42.75  Aligned_cols=28  Identities=14%  Similarity=0.126  Sum_probs=24.8

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .++|+|+.|.||+++.++ +.+.||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            468999999999999888 9999999763

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.36  E-value=0.1  Score=41.02  Aligned_cols=29  Identities=17%  Similarity=0.329  Sum_probs=24.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      -.+|+|+.|.||++..+| ++|.||+.+-.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            358999999999997777 88999998744

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=92.06  E-value=0.11  Score=43.96  Aligned_cols=30  Identities=23%  Similarity=0.448  Sum_probs=25.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .|+||+|+.+.||+++. +.+.|.||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            58999999999999987 6688999996543

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.80  E-value=0.12  Score=42.69  Aligned_cols=30  Identities=20%  Similarity=0.360  Sum_probs=25.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccC
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKC   33 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~   33 (250)
                      .++|+|+.|.||+++.++ +.|.||+.+..-
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~g  176 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDG  176 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCcC
Confidence            589999999999998877 789999877443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=91.76  E-value=0.13  Score=46.99  Aligned_cols=34  Identities=44%  Similarity=0.652  Sum_probs=30.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      .|+.|.|..|.||+++.+|.+.+.|||+......
T Consensus       284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            6899999999999999999999999999866554

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.33  E-value=0.13  Score=41.10  Aligned_cols=28  Identities=36%  Similarity=0.700  Sum_probs=20.1

Q ss_pred             cceeecCCCCcEEe-CCCCCeeeccccCC
Q 025601            3 GIVYRDLKPENVLV-RSDGHIMLTDFDLS   30 (250)
Q Consensus         3 giiHrDIKp~Nill-~~~~~~kl~dfgl~   30 (250)
                      .+.|.||.+.||++ ..++.++|.||..+
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya  172 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYA  172 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHH
Confidence            47899999999999 78899999999877

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=91.29  E-value=0.16  Score=42.48  Aligned_cols=30  Identities=27%  Similarity=0.438  Sum_probs=26.9

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      -++|.|+.|.|++++..+.++|.||..|..
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            379999999999999999999999987744

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=91.09  E-value=0.19  Score=39.75  Aligned_cols=35  Identities=26%  Similarity=0.314  Sum_probs=28.0

Q ss_pred             ccceeecCCCCcEEeCCCC-----CeeeccccCCccCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG-----HIMLTDFDLSLKCDDS   36 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~-----~~kl~dfgl~~~~~~~   36 (250)
                      ..++|+|+.+.||++..++     .+.+.||..+....+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~  159 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA  159 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence            4689999999999998543     5899999988665543

subfamily of choline kinases

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=91.05  E-value=0.12  Score=43.97  Aligned_cols=34  Identities=12%  Similarity=0.052  Sum_probs=29.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      .|++|+|+.++|++++.++.+.+.||..+.....
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASFASP  229 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCc
Confidence            4899999999999999998999999987755433

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=90.17  E-value=0.21  Score=41.91  Aligned_cols=30  Identities=27%  Similarity=0.390  Sum_probs=24.7

Q ss_pred             cceeecCCCCcEEeCCCCC-eeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGH-IMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~-~kl~dfgl~~~   32 (250)
                      .++|+|+.+.||+++.++. .-|.||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4799999999999987454 57999997744

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK09902 hypothetical protein; Provisional

Probab=89.99  E-value=0.19  Score=40.39  Aligned_cols=33  Identities=12%  Similarity=0.092  Sum_probs=27.8

Q ss_pred             ccceeecCCCCcEEeCCCCC--eeeccccCCccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH--IMLTDFDLSLKCD   34 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~--~kl~dfgl~~~~~   34 (250)
                      .|+.|+|+-+.||+++.+|.  +++.||.-++...
T Consensus       147 ~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~l  181 (216)
T PRK09902        147 VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRL  181 (216)
T ss_pred             CCCcCCCCCHhheeecCCCCeeEEEEEhhccchhh
Confidence            69999999999999987677  8999998665433

>PLN02236 choline kinase

Probab=89.52  E-value=0.26  Score=42.73  Aligned_cols=31  Identities=19%  Similarity=0.389  Sum_probs=26.3

Q ss_pred             cceeecCCCCcEEeCC-CCCeeeccccCCccC
Q 025601            3 GIVYRDLKPENVLVRS-DGHIMLTDFDLSLKC   33 (250)
Q Consensus         3 giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~   33 (250)
                      .++|+|+++.||+++. ++.+.+.||..+...
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence            5899999999999976 478999999887543

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=89.25  E-value=0.24  Score=40.28  Aligned_cols=28  Identities=21%  Similarity=0.241  Sum_probs=25.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDL   29 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl   29 (250)
                      -+.+|+|..|+|||-+..|.+||.|=+.
T Consensus       162 ~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  162 QHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             CCeecCCCChhheeecCCCCEEecChhh
Confidence            3689999999999999999999999653

The function of this family is unknown.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=89.21  E-value=0.31  Score=41.99  Aligned_cols=27  Identities=41%  Similarity=0.571  Sum_probs=24.4

Q ss_pred             ceeecCCCCcEEeCCCC-CeeeccccCC
Q 025601            4 IVYRDLKPENVLVRSDG-HIMLTDFDLS   30 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~-~~kl~dfgl~   30 (250)
                      |||+|+.|.||+++.+. .+.+.||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            99999999999999877 4899999965

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=88.82  E-value=0.24  Score=40.75  Aligned_cols=28  Identities=36%  Similarity=0.534  Sum_probs=25.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      .|+||+||..-|||+. ++.+.++||+=+
T Consensus       186 a~LVHgDLSEyNiL~~-~~~p~iID~~Qa  213 (268)
T COG1718         186 AGLVHGDLSEYNILVH-DGEPYIIDVSQA  213 (268)
T ss_pred             cCcccccchhhheEEE-CCeEEEEECccc
Confidence            5899999999999998 899999999855

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=88.70  E-value=0.047  Score=50.47  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=36.9

Q ss_pred             CcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 025601          111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG  154 (250)
Q Consensus       111 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~  154 (250)
                      .+.+|+.|+|||+.....+....|+|++|.-..++.-|..|-..
T Consensus       389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            45789999999999999999999999999877777777766543

>PRK06148 hypothetical protein; Provisional

Probab=88.24  E-value=0.36  Score=48.01  Aligned_cols=29  Identities=31%  Similarity=0.418  Sum_probs=24.4

Q ss_pred             ccceeecCCCCcEEeCCCC--Ce-eeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDG--HI-MLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~--~~-kl~dfgl~   30 (250)
                      +++||.|+.+.||+++.++  .+ -|.|||-+
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa  234 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDA  234 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccc
Confidence            5799999999999998775  45 49999965

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=86.53  E-value=0.42  Score=41.31  Aligned_cols=15  Identities=40%  Similarity=0.711  Sum_probs=13.4

Q ss_pred             cceeecCCCCcEEeC
Q 025601            3 GIVYRDLKPENVLVR   17 (250)
Q Consensus         3 giiHrDIKp~Nill~   17 (250)
                      ..+|-||||+|||+-
T Consensus       299 nF~H~DLKPdNILiF  313 (434)
T PF05445_consen  299 NFLHVDLKPDNILIF  313 (434)
T ss_pred             eeeecccCcCcEEEe
Confidence            579999999999984

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=85.54  E-value=0.56  Score=40.41  Aligned_cols=27  Identities=30%  Similarity=0.618  Sum_probs=25.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeecccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFD   28 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfg   28 (250)
                      +|+||+|..--||++..++.++++||-
T Consensus       221 ~GlIHgDFNEFNimv~dd~~i~vIDFP  247 (465)
T KOG2268|consen  221 HGLIHGDFNEFNIMVKDDDKIVVIDFP  247 (465)
T ss_pred             cCceecccchheeEEecCCCEEEeech
Confidence            799999999999999999999999995

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=85.40  E-value=0.67  Score=39.70  Aligned_cols=40  Identities=23%  Similarity=0.289  Sum_probs=33.3

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhh
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI   42 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~   42 (250)
                      .++|+|+.+.||+++.++-+-+.||+++..-.+..+....
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~Dl~~~  238 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLEDLAII  238 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccCCcHHHHHHH
Confidence            5899999999999998888999999998776666555444

>PRK11768 serine/threonine protein kinase; Provisional

Probab=84.55  E-value=0.58  Score=40.21  Aligned_cols=28  Identities=32%  Similarity=0.324  Sum_probs=23.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .|+||+|+.+.||+++ + .+.+.||+-+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            4789999999999994 4 57899999763

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=83.77  E-value=0.87  Score=39.20  Aligned_cols=29  Identities=21%  Similarity=0.468  Sum_probs=25.1

Q ss_pred             ceeecCCCCcEEeCC-CCCeeeccccCCcc
Q 025601            4 IVYRDLKPENVLVRS-DGHIMLTDFDLSLK   32 (250)
Q Consensus         4 iiHrDIKp~Nill~~-~~~~kl~dfgl~~~   32 (250)
                      ++|.|+.+.||++.. ++.+++.||..+-.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            689999999999974 57899999998744

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=83.02  E-value=0.78  Score=38.55  Aligned_cols=35  Identities=26%  Similarity=0.416  Sum_probs=27.6

Q ss_pred             cceeecCCCCcEEeCCC--C---CeeeccccCCccCCCCc
Q 025601            3 GIVYRDLKPENVLVRSD--G---HIMLTDFDLSLKCDDSA   37 (250)
Q Consensus         3 giiHrDIKp~Nill~~~--~---~~kl~dfgl~~~~~~~~   37 (250)
                      -|+|+|++..|||+..+  |   .+++.||-+++...+..
T Consensus       216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~  255 (294)
T PF02958_consen  216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAI  255 (294)
T ss_pred             EEEcCccCHHhEeEccccccccccceeeccccccCCCcHh
Confidence            37999999999999754  3   58999998876655443

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=82.66  E-value=1.1  Score=41.16  Aligned_cols=35  Identities=34%  Similarity=0.469  Sum_probs=29.9

Q ss_pred             ccceeecCCCCcEEeCC----CCCeeeccccCCccCCCC
Q 025601            2 LGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS   36 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~----~~~~kl~dfgl~~~~~~~   36 (250)
                      .|++|+|-.|-||+++.    ++.+.+.|||+.......
T Consensus       320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            68999999999999984    568999999998776554

>PRK06149 hypothetical protein; Provisional

Probab=82.64  E-value=0.82  Score=45.36  Aligned_cols=29  Identities=31%  Similarity=0.319  Sum_probs=24.0

Q ss_pred             ccceeecCCCCcEEeCCC--CC---eeeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSD--GH---IMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~--~~---~kl~dfgl~   30 (250)
                      .|+||.|+.+.||+++.+  +.   .-|.|||-+
T Consensus       208 ~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~  241 (972)
T PRK06149        208 LQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDL  241 (972)
T ss_pred             ccccCCCCCcccEEEcCCCCCCcceeEEEEcccc
Confidence            589999999999999865  22   479999965

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=81.92  E-value=1.1  Score=39.73  Aligned_cols=30  Identities=13%  Similarity=0.290  Sum_probs=24.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      ..++|+|+.+.|||+..+ .+++.||..+..
T Consensus       223 ~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            358999999999999665 589999986643

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=80.41  E-value=1.2  Score=39.08  Aligned_cols=29  Identities=34%  Similarity=0.605  Sum_probs=25.9

Q ss_pred             ceeecCCCCcEEeCCCCCeeeccccCCccC
Q 025601            4 IVYRDLKPENVLVRSDGHIMLTDFDLSLKC   33 (250)
Q Consensus         4 iiHrDIKp~Nill~~~~~~kl~dfgl~~~~   33 (250)
                      .=|||+.-.||+|+ +|.+.|.||-+++..
T Consensus       343 fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         343 FEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             cccccccccceeee-cCceEEEEeeeeecc
Confidence            34999999999999 999999999998743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		9e-23
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-21
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		6e-21
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-20
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-20
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-20
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-20
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		4e-20
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		4e-20
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		4e-20
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-20
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-20
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		6e-20
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-19
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-19
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-19
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-19
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		3e-19
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		3e-19
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-19
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-19
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-19
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-18
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-18
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		6e-18
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-18
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		7e-18
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		9e-18
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-17
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-17
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-17
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-17
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-17
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-17
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-17
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		4e-17
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		5e-17
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-17
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		7e-17
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		9e-17
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-16
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-16
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-16
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-16
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-16
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-16
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-16
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-16
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-16
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-16
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-16
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-16
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-16
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-16
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-16
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-16
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-16
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-16
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-16
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-16
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-16
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-16
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-16
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-15
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-15
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-15
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-15
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-15
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-15
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-15
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-15
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-15
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-15
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-15
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-15
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-15
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-15
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-15
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-15
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-15
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		2e-15
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		2e-15
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-15
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-15
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-15
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-15
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-15
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-15
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-15
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-15
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-15
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-15
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		2e-15
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-15
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-15
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-15
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-15
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-15
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-15
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-15
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-15
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-15
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-15
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-15
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-15
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-15
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-15
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-15
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		5e-15
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		5e-15
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		5e-15
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		5e-15
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		6e-15
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		7e-15
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		8e-15
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		8e-15
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-14
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-14
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-14
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-14
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-14
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-14
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		8e-14
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-12
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-12
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-12
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-12
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-12
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-12
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-12
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-12
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-12
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-12
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-12
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-12
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-12
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		4e-11
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-11
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		5e-11
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		7e-11
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-10
3soa_A	444	Full-Length Human Camkii Length = 444		1e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-10
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-10
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-10
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-10
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-10
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-10
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		4e-10
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		4e-10
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-10
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-10
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-10
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		5e-10
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		6e-10
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-10
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-10
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		6e-10
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-10
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-10
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		7e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-10
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-10
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-10
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-10
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-10
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		8e-10
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		8e-10
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		8e-10
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		8e-10
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		9e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		9e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-10
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-09
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-09
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-09
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-09
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-09
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-09
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		3e-09
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		5e-09
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		1e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-08
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-08
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		4e-08
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		5e-08
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		6e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		6e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		6e-08
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		6e-08
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-07
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-07
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-07
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-07
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-07
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		3e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-07
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		7e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-07
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		3e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-06
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-06
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-06
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		3e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-06
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-06
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		6e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		6e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		6e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		8e-06
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-05
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-05
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-05
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-05
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-05
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-05
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-05
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-05
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-05
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		3e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-05
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-05
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-05
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-05
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		4e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		5e-05
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		6e-05
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		6e-05
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		6e-05
2oza_A	356	Structure Of P38alpha Complex Length = 356		6e-05
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		6e-05
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		6e-05
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		6e-05
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		6e-05
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		7e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		7e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		7e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		7e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		7e-05
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		7e-05
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		8e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		8e-05
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		9e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		9e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		1e-04
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		1e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-04
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-04
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-04
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-04
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		5e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		7e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		7e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		7e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		8e-04
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		8e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		9e-04

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 82/143 (57%), Gaps = 13/143 (9%)
Query: 98  PEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
            EFV +  + R+  F GT EY+AP+IV G   GH   VDWW+LG+ ++EL  G +PF   
Sbjct: 207 KEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 156 DHELTLANIVARALE----FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHP 210
             + + A I  R L+    +P+E  + A AKDLI +LL KDP++RLG   + A  IK H 
Sbjct: 266 GEKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323
Query: 211 FFQGVNWALLRCTTPPFVPPPFN 233
           FFQ +NW  L       VP PF 
Sbjct: 324 FFQKINWDDLAAKK---VPAPFK 343

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EY+APEI+   GH   VDWW+LG  ++++  G  PF G + + T+  I+   L 
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWA--LLRCTTPPF 227
            P  P +   A+DL+ +LL ++   RLG+  G A  ++ HPFF+ +NW   L R   PPF
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 228 VPPPFNRELVSD---ESCPETPVE 248
            P   + E VS    +   +TPV+
Sbjct: 298 KPLLQSEEDVSQFDSKFTRQTPVD 321

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EY+APEI+   GH   VDWW+LG  ++++  G  PF G + + T+  I+   L  
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWA--LLRCTTPPFV 228
           P  P +   A+DL+ +LL ++   RLG+  G A  ++ HPFF+ +NW   L R   PPF 
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 229 PPPFNRELVSD---ESCPETPVE 248
           P   + E VS    +   +TPV+
Sbjct: 299 PLLQSEEDVSQFDSKFTRQTPVD 321

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 98/230 (42%), Gaps = 73/230 (31%)
Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           L IVYRDLKPEN+L+ S GHI+LTDF L   C ++                      ++H
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL---CKEN----------------------IEH 192
Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
              TS  C                            PE++                  AP
Sbjct: 193 NSTTSTFC--------------------------GTPEYL------------------AP 208
Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATA 181
           E++  + +   VDWW LG  L+E+ YG+ PF   +      NI+ + L+   +P +  +A
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSA 266
Query: 182 KDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVP 229
           + L+  LL KD  +RLG+      IK H FF  +NW  L  +  TPPF P
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP 316

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ SF GT EY+APE+V+ +GH    DWW+ G+ +FE+  G  PF+G D + T+  I+  
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
            L  P+   +   A+ L+  L  ++P  RLGS   GA  IK H F+  ++W  L  R   
Sbjct: 246 KLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 225 PPFVP 229
           PPF P
Sbjct: 304 PPFKP 308

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
           FP+   +   AK L+S LL KDP++RL G ++ A  I  H FF G+ W  +  +  +PPF
Sbjct: 371 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 428
Query: 228 VP 229
            P
Sbjct: 429 KP 430

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPF 227
           FP+   +   AK L+S LL KDP++RL G ++ A  I  H FF G+ W  +  +  +PPF
Sbjct: 368 FPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 425
Query: 228 VP 229
            P
Sbjct: 426 KP 427

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
           P+   +   AK L+S LL KDP++RL G ++ A  I  H FF G+ W  +  +  +PPF 
Sbjct: 231 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 288
Query: 229 P 229
           P
Sbjct: 289 P 289

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
           P+   +   AK L+S LL KDP++RL G ++ A  I  H FF G+ W  +  +  +PPF 
Sbjct: 229 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 286
Query: 229 P 229
           P
Sbjct: 287 P 287

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 172 PKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFV 228
           P+   +   AK L+S LL KDP++RL G ++ A  I  H FF G+ W  +  +  +PPF 
Sbjct: 230 PR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 287
Query: 229 P 229
           P
Sbjct: 288 P 288

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ SF GT EY+APE+V+  GH    DWW+ G+ +FE+  G  PF+G D + T+  I+  
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
            L  P+   +   A+ L+  L  ++P  RLG+   G   IK H FF  ++W  L  R   
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 225 PPFVP 229
           PPF P
Sbjct: 300 PPFKP 304

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ SF GT EY+APE+V+  GH    DWW+ G+ +FE+  G  PF+G D + T+  I+  
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
            L  P+   +   A+ L+  L  ++P  RLG+   G   IK H FF  ++W  L  R   
Sbjct: 242 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 225 PPFVP 229
           PPF P
Sbjct: 300 PPFKP 304

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ SF GT EY+APE+V+  GH    DWW+ G+ +FE+  G  PF+G D + T+  I+  
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTT 224
            L  P+   +   A+ L+  L  ++P  RLG+   G   IK H FF  ++W  L  R   
Sbjct: 243 KLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 225 PPFVP 229
           PPF P
Sbjct: 301 PPFKP 305

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D ++  F GT +Y+APEI+ G+ +   VDWW+ G+ L+E+  G +PF G D E    +I 
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                +P+   +   AKDL+ +L  ++PE+RLG       I+ HP F+ +NW  L  +  
Sbjct: 233 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 224 TPPFVPP---PFNRELVSDESCPETP 246
            PPF P    PF+      E   E P
Sbjct: 288 DPPFRPKVKSPFDCSNFDKEFLNEKP 313

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D ++  F GT +Y+APEI+ G+ +   VDWW+ G+ L+E+  G +PF G D E    +I 
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                +P+   +   AKDL+ +L  ++PE+RLG       I+ HP F+ +NW  L  +  
Sbjct: 232 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 224 TPPFVPP---PFNRELVSDESCPETP 246
            PPF P    PF+      E   E P
Sbjct: 287 DPPFRPKVKSPFDCSNFDKEFLNEKP 312

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
           FP+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF
Sbjct: 227 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 284
Query: 228 VP 229
            P
Sbjct: 285 KP 286

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
           FP+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 228 VP 229
            P
Sbjct: 282 KP 283

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + 
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPF 227
           FP+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 228 VP 229
            P
Sbjct: 282 KP 283

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
           P+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF 
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
           P
Sbjct: 283 P 283

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
           P+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF 
Sbjct: 230 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 287
Query: 229 P 229
           P
Sbjct: 288 P 288

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
           P+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF 
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
           P
Sbjct: 283 P 283

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+   + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNW--ALLRCTTPPFV 228
           P+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW   + +   PPF 
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 229 P 229
           P
Sbjct: 283 P 283

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT +Y+APE+VS + +   +DWW+ GI ++E+  G TPF   +   T   I+   L FP 
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPP 230
            P      KDL+S+L+ +D  +RLG+ + G   +K+HP+F+ V W  L  R    P+ PP
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           V +  F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+ 
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
             + +PK  +  A A  +   L+ K P +RLG   +G   IK H FF+ ++W  L  +  
Sbjct: 557 HNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 614
Query: 224 TPPFVPPPFNR 234
            PP+ P    R
Sbjct: 615 QPPYKPKASGR 625

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGS-------PVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           VRS+  VGT +YL+PEI+   G G          DWW LG+F +E+FYG TPF       
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 160 TLANIV--ARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
           T   IV     L  P  +  VP  A+D I +LL   PE RLG   GA   + HPFF G++
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGR-GGAGDFRTHPFFFGLD 335
Query: 217 WALLRCTTPPFVP 229
           W  LR + PPF P
Sbjct: 336 WDGLRDSVPPFTP 348

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           V +  F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+ 
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
             + +PK  +  A A  +   L+ K P +RLG   +G   IK H FF+ ++W  L  +  
Sbjct: 236 HNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 293
Query: 224 TPPFVPPPFNR 234
            PP+ P    R
Sbjct: 294 QPPYKPKACGR 304

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
           + P D  S +F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  V      
Sbjct: 204 LRPGDTTS-TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
                +     I+ + +  P+  +V A +  ++   L KDP+ RLG     G + I+ HP
Sbjct: 263 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 320
Query: 211 FFQGVNWALL--RCTTPPFVP 229
           FF+ V+W ++  +   PPF P
Sbjct: 321 FFRNVDWDMMEQKQVVPPFKP 341

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
           + P D  S  F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  V      
Sbjct: 172 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
                +     I+ + +  P+  +V A +  ++   L KDP+ RLG     G + I+ HP
Sbjct: 231 DQNTEDYLFQVILEKQIRIPRSMSVKAAS--VLKSFLNKDPKERLGCLPQTGFADIQGHP 288
Query: 211 FFQGVNWALL--RCTTPPFVP 229
           FF+ V+W ++  +   PPF P
Sbjct: 289 FFRNVDWDMMEQKQVVPPFKP 309

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
           + P D  S  F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  V      
Sbjct: 157 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
                +     I+ + +  P+  +V A +  ++   L KDP+ RLG     G + I+ HP
Sbjct: 216 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 273
Query: 211 FFQGVNWALL--RCTTPPFVP 229
           FF+ V+W ++  +   PPF P
Sbjct: 274 FFRNVDWDMMEQKQVVPPFKP 294

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
           + P D  S  F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF  V      
Sbjct: 161 LRPGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
Query: 157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHP 210
                +     I+ + +  P+  +V A +  ++   L KDP+ RLG     G + I+ HP
Sbjct: 220 DQNTEDYLFQVILEKQIRIPRSLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHP 277
Query: 211 FFQGVNWALL--RCTTPPFVP 229
           FF+ V+W ++  +   PPF P
Sbjct: 278 FFRNVDWDMMEQKQVVPPFKP 298

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           V +  F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+ 
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCT 223
             + +PK  ++   A  +   L+ K P +RLG   +G   ++ H FF+ ++W  L  R  
Sbjct: 235 HNVSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREI 292
Query: 224 TPPFVP 229
            PPF P
Sbjct: 293 QPPFKP 298

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+ SFVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           V + +F GT +Y+APEI+    +G  VDWW +G+ L+E+  G  PF   + +     I+ 
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQGVNWALL--RC 222
             + +P      AT   ++   + K+P  RLGS    G  AI  HPFF+ ++WA L  R 
Sbjct: 239 DEVVYPTWLHEDATG--ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQ 296
Query: 223 TTPPFVPPPFNRELVSD 239
             PPF P   +RE VS+
Sbjct: 297 IEPPFRPRIKSREDVSN 313

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L  A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+ SFVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 242 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 221 RCTTPP 226
              TPP
Sbjct: 300 HQQTPP 305

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+ SFVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 246 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 221 RCTTPP 226
              TPP
Sbjct: 304 HQQTPP 309

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L  A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 73/135 (54%), Gaps = 15/135 (11%)
Query: 113 VGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--A 166
           VGT +Y++PE++  +G    +G   DWW++G+FLFE+  G TPF       T + I+   
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG--VNWALLRCTT 224
            +L FP++  +   AK+LI   L  D E RLG   G   IK HPFF+    NW  +R T 
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFLT-DREVRLGRN-GVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 225 PPFVPPPFNRELVSD 239
            P VP     EL SD
Sbjct: 354 APVVP-----ELSSD 363

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGV 155
           ++E   V+S   VGT +Y++PEI+     G+G +G   DWW+LG+ ++E+ YG TPF   
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 156 DHELTLANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
               T   I+      +FP +   V   AKDLI +L+    E RLG   G    K HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS-REHRLGQN-GIEDFKKHPFF 342
Query: 213 QGVNWALLRCTTPPFVP 229
            G++W  +R    P++P
Sbjct: 343 SGIDWDNIRNCEAPYIP 359

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+ +FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
              TPP
Sbjct: 301 HQQTPP 306

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 223 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
Query: 221 RCTTPP 226
              TPP
Sbjct: 281 HQQTPP 286

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 222 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
Query: 221 RCTTPP 226
              TPP
Sbjct: 280 HQQTPP 285

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 221 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
Query: 221 RCTTPP 226
              TPP
Sbjct: 279 HQQTPP 284

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 220 KIIKLEYDFP-EKFFPK-ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
Query: 221 RCTTPP 226
              TPP
Sbjct: 278 HQQTPP 283

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G    +G   DWW++G+FL+E+  G TPF       T +
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
            I+    +L FP +  +   AK+LI   L  D E RLG   G   IK H FF+   WA  
Sbjct: 284 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 341
Query: 220 -LRCTTPPFVP 229
            LR T  P VP
Sbjct: 342 TLRDTVAPVVP 352

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 242 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 221 RCTTPP 226
              TPP
Sbjct: 300 HQQTPP 305

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G    +G   DWW++G+FL+E+  G TPF       T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
            I+    +L FP +  +   AK+LI   L  D E RLG   G   IK H FF+   WA  
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 346
Query: 220 -LRCTTPPFVP 229
            LR T  P VP
Sbjct: 347 TLRDTVAPVVP 357

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           VR  + VGT +Y++PE++  +G    +G   DWW++G+FL+E+  G TPF       T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 163 NIV--ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL- 219
            I+    +L FP +  +   AK+LI   L  D E RLG   G   IK H FF+   WA  
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRN-GVEEIKRHLFFKNDQWAWE 346
Query: 220 -LRCTTPPFVP 229
            LR T  P VP
Sbjct: 347 TLRDTVAPVVP 357

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
              TPP
Sbjct: 301 HQQTPP 306

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 227 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
Query: 221 RCTTPP 226
              TPP
Sbjct: 285 HQQTPP 290

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 250 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
Query: 221 RCTTPP 226
              TPP
Sbjct: 308 HQQTPP 313

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
              TPP
Sbjct: 301 HQQTPP 306

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 243 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 221 RCTTPP 226
              TPP
Sbjct: 301 HQQTPP 306

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 247
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP   A    A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 248 KIIKLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
Query: 221 RCTTPP 226
              TPP
Sbjct: 306 HQQTPP 311

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 246 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 221 RCTTPP 226
              TPP
Sbjct: 304 HQQTPP 309

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           E    R+  FVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L   
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLG--STKGASAIKHHPFFQGVNWALL 220
            I+    +FP E   P  A+DL+ +LL  D  +RLG    +G   +K HPFF+ V W  L
Sbjct: 245 KIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 221 RCTTPP 226
              TPP
Sbjct: 303 HQQTPP 308

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           V+S   VGT +Y++PEI+     G G +G   DWW+LG+ ++E+ YG TPF       T 
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 162 ANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
             I+      +FP     V   AKDLI +L+    ERRLG   G    K H FF+G+NW 
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLGQN-GIEDFKKHAFFEGLNWE 364
Query: 219 LLRCTTPPFVP 229
            +R    P++P
Sbjct: 365 NIRNLEAPYIP 375

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 107 VRSMSFVGTHEYLAPEIVS----GEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           V+S   VGT +Y++PEI+     G G +G   DWW+LG+ ++E+ YG TPF       T 
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 162 ANIV--ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
             I+      +FP     V   AKDLI +L+    ERRLG   G    K H FF+G+NW 
Sbjct: 291 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICS-RERRLGQN-GIEDFKKHAFFEGLNWE 348
Query: 219 LLRCTTPPFVP 229
            +R    P++P
Sbjct: 349 NIRNLEAPYIP 359

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+V  E +    DWW LG  L+E+  G +PF+    ++    +     E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 173 KEPA--VPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWALLRCTT--PPF 227
           +E +      A+ L SQLL KDP  RLG   G A  +K HP F+ +N+  L      PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 228 VPPP 231
            P P
Sbjct: 466 KPDP 469

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y+APE+V  E +    DWW LG  L+E+  G +PF+    ++    +     E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 173 KEPA--VPATAKDLISQLLAKDPERRLGSTKG-ASAIKHHPFFQGVNWALLRCTT--PPF 227
           +E +      A+ L SQLL KDP  RLG   G A  +K HP F+ +N+  L      PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 228 VPPP 231
            P P
Sbjct: 466 KPDP 469

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+ +  GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+ +  GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 177 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 236
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 237 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 294
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 295 KVEAPFIP 302

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF   +       I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           + + V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF        
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWAL 219
              IV+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 220 L--RCTTPPFVP 229
           +  R    PF+P
Sbjct: 305 IYQRKVEAPFIP 316

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 5/132 (3%)
Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           + + V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF        
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWAL 219
              IV+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 220 L--RCTTPPFVP 229
           +  R    PF+P
Sbjct: 305 IYQRKVEAPFIP 316

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 178 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 237
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 238 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 295
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 296 KVEAPFIP 303

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 244 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 301
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 302 KVEAPFIP 309

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 243
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 244 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 301
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 302 KVEAPFIP 309

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 186 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 245
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 246 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 303
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 304 KVEAPFIP 311

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 272 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 329
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 330 KVEAPFIP 337

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 271
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 272 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 329
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 330 KVEAPFIP 337

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++++  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+    +   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
           A+E P   +     + L+  LL +D  RRLG   +GA  +K  PFF+ ++W +  L+   
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
           PP +PP
Sbjct: 468 PPLIPP 473

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+    +   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
           A+E P   +     + L+  LL +D  RRLG   +GA  +K  PFF+ ++W +  L+   
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
           PP +PP
Sbjct: 468 PPLIPP 473

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+    +   
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 408
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
           A+E P   +     + L+  LL +D  RRLG   +GA  +K  PFF+ ++W +  L+   
Sbjct: 409 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 466
Query: 225 PPFVPP 230
           PP +PP
Sbjct: 467 PPLIPP 472

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 113 VGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFR----GVDHELTLANIVAR 167
           VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR       HE+    +   
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWAL--LRCTT 224
           A+E P   +     + L+  LL +D  RRLG   +GA  +K  PFF+ ++W +  L+   
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 225 PPFVPP 230
           PP +PP
Sbjct: 468 PPLIPP 473

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+   G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           + +  GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           IV+  
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTP 225
           + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R    
Sbjct: 276 VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 333
Query: 226 PFVP 229
           PF+P
Sbjct: 334 PFIP 337

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 251
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + I +H +F   +W  +  R
Sbjct: 252 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQR 309
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 310 KVEAPFIP 317

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAP I+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT EYLAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +  G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
            ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR     V+++    
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
            ++ +A+ +P + + PA+ KD    LL KDPE+RLG   G+   ++ HP F+ ++W  L 
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
               TPPFVP
Sbjct: 462 AGMLTPPFVP 471

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
            ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR     V+++    
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
            ++ +A+ +P + + PA+ KD    LL KDPE+RLG   G+   ++ HP F+ ++W  L 
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
               TPPFVP
Sbjct: 462 AGMLTPPFVP 471

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
            ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR     V+++    
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
            ++ +A+ +P + + PA+ KD    LL KDPE+RLG   G+   ++ HP F+ ++W  L 
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
               TPPFVP
Sbjct: 462 AGMLTPPFVP 471

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLA 162
            ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR     V+++    
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGA-SAIKHHPFFQGVNWALLR 221
            ++ +A+ +P + + PA+ KD    LL KDPE+RLG   G+   ++ HP F+ ++W  L 
Sbjct: 404 RVLEQAVTYPDKFS-PAS-KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE 461
Query: 222 C--TTPPFVP 229
               TPPFVP
Sbjct: 462 AGMLTPPFVP 471

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+    GT E LAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250
Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308
Query: 222 CTTPPFVP 229
               PF+P
Sbjct: 309 KVEAPFIP 316

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +R  +  GT +YL PE++ G  H   VD W +G+  +EL  G  PF    H  T   IV 
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK 235
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
             L+FP   +VP  A+DLIS+LL  +P  RL
Sbjct: 236 VDLKFP--ASVPTGAQDLISKLLRHNPSERL 264

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRM 263

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRM 263

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT  ++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF  
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E      A AKD I +LL KDP++R+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRM 264

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TL NI A   +F +
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL KDP+RR+
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRM 258

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TL NI A   +F +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL KDP+RR+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TL NI A   +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL KDP+RR+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
            F GT  YL+PE++  E +G PVD W  G+ L+ L  G  PF   D       I A A +
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           F  P+   V   AK+LI+Q+L  +P +R+ + +   A+KH
Sbjct: 225 FPSPEWDTVTPEAKNLINQMLTINPAKRITAHE---ALKH 261

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 97  GPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD 156
           G    VE        F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D
Sbjct: 169 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 228
Query: 157 HELTLANIVARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
                  I A A +F  P+   V   AKDLI+++L  +P +R+ +   A A+KH
Sbjct: 229 QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKH 279

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +R     GT +YL PE++ G+ H   VD W  G+  +E   G+ PF    H  T   IV 
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 227
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
             L+FP  P +   +KDLIS+LL   P +RL
Sbjct: 228 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 256

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
            F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D       I A A +
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           F  P+   V   AKDLI+++L  +P +R+ +   A A+KH
Sbjct: 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITA---AEALKH 268

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +R     GT +YL PE++ G+ H   VD W  G+  +E   G+ PF    H  T   IV 
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRL 197
             L+FP  P +   +KDLIS+LL   P +RL
Sbjct: 227 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 255

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D       I A A +F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
             P+   V   AKDLI+++L  +P +R+ +++   A+KH
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASE---ALKH 261

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
            F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D       I A A +
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           F  P+   V   AKDLI+++L  +P +R+ +++   A+KH
Sbjct: 225 FPSPEWDTVTPEAKDLINKMLTINPAKRITASE---ALKH 261

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 174 E--PAVPATAKDLISQLLAKDPERRL 197
           E        AKD I +LL K+  +RL
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
             F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D       I A A 
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 170 EF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           +F  P+   V   AK+LI+Q+L  +P +R+ + +   A+KH
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRITADQ---ALKH 288

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 188 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 248 EFTFPD--FVTEGARDLISRLLKHNPSQR 274

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 179 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 239 EFTFP--DFVTEGARDLISRLLKHNPSQR 265

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           GT  YLAPEI+         G+G  VD W  G+ LF L  G  PF      L L  I+  
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             +F  P+     +T KDLIS+LL  DPE RL + +       HPFF+
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL----QHPFFE 364

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 224 EFTFP--DFVTEGARDLISRLLKHNPSQR 250

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
            +GT EYLAPEI++ +   +  D W +GI  + L    +PF G D++ T  NI    +++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 172 PKE--PAVPATAKDLISQLLAKDPERR 196
            +E   +V   A D I  LL K+PE+R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 163 RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 161 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 221 EFTFPD--FVTEGARDLISRLLKHNPSQR 247

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 226 EFTFPD--FVTEGARDLISRLLKHNPSQR 252

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 159 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 219 EFTFPD--FVTEGARDLISRLLKHNPSQR 245

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 224 EFTFP--DFVTEGARDLISRLLKHNPSQR 250

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE + G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 167 RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 227 EFTFP--DFVTEGARDLISRLLKHNPSQR 253

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 248 EFTFPD--FVTEGARDLISRLLKHNPSQR 274

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G+ PF    ++ T   I   
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRL 197
              FP    V   A+DLIS+LL  +  +RL
Sbjct: 226 EFTFPD--FVTEGARDLISRLLKHNASQRL 253

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 223 EFTFP--DFVTEGARDLISRLLKHNPSQR 249

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFP--DFVTEGARDLISRLLKHNPSQR 248

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  ++APE+V  E +G PVD W  G+ LF L  G  PF G    L    I  +    P
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 255
Query: 173 KE-PAVPATAKDLISQLLAKDPERRL 197
           ++   +  +AKDL+ ++L  DP  R+
Sbjct: 256 RQWSHISESAKDLVRRMLMLDPAERI 281

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  ++APE+V  E +G PVD W  G+ LF L  G  PF G    L    I  +    P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 173 KE-PAVPATAKDLISQLLAKDPERRL 197
           ++   +  +AKDL+ ++L  DP  R+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERI 279

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFP--DFVTEGARDLISRLLKHNPSQR 251

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  ++APE+V  E +G PVD W  G+ LF L  G  PF G    L    I  +    P
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP 253
Query: 173 KEPA-VPATAKDLISQLLAKDPERRL 197
           ++ + +  +AKDL+ ++L  DP  R+
Sbjct: 254 RQWSHISESAKDLVRRMLMLDPAERI 279

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 162 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 222 EFTFPD--FVTEGARDLISRLLKHNPSQR 248

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
             T E+ APEIV  E  G   D W +G+  + L  G++PF G D   TL N+     EF 
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           ++   +V   AKD I  LL K+P +RL           HP+ +G
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE----HPWLKG 310

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G+ PF    ++ T   I   
Sbjct: 166 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRL 197
              FP    V   A+DLIS+LL  +  +RL
Sbjct: 226 EFTFP--DFVTEGARDLISRLLKHNASQRL 253

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 111 SFVGTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           S  GT  YLAPEI+         G+G  VD W+ G+ ++ L  G  PF      L L  I
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 165 VARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           ++   +F  P+      T KDL+S+ L   P++R  + +  +    HPFFQ
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
              FP    V   A+DLIS+LL  +P +R
Sbjct: 225 EFTFPD--FVTEGARDLISRLLKHNPSQR 251

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT E+LAPE+V+ +    P D W++G+  + L  G++PF G +   TL NI+A   +   
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 174 E--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
           E    +   AK+ IS+LL K+   R+ +++   A+KH
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASE---ALKH 343

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           +  +  GT  Y++PEI +   HG   D W+LG   + L  G  PF     + TL  +V  
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
             E P   ++   AKDLI QLL ++P  RL      S++  HPF 
Sbjct: 228 DYEMPSFLSIE--AKDLIHQLLRRNPADRL----SLSSVLDHPFM 266

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           GT  YLAPEI+         G+G  VD W+ G+ ++ L  G  PF      L L  I++ 
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             +F  P+      T KDL+S+ L   P++R  + +  +    HPFFQ
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 275

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 114 GTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           GT  YLAPEI+         G+G  VD W+ G+ ++ L  G  PF      L L  I++ 
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 168 ALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             +F  P+      T KDL+S+ L   P++R  + +  +    HPFFQ
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 113 VGTHEYLAPEIVSGEGH---GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           VGT  ++APE +S       G  +D W +G+ L+   +G  PF         + I ++AL
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
           EFP +P +    KDLI+++L K+PE R+        IK HP+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPW 295

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
             P+   V   AK LI  +L  +P++R+ + + 
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 258

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
             P+   V   AK LI  +L  +P++R+ + + 
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKG 202
             P+   V   AK LI  +L  +P++R+ + + 
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDH--ELTLANIVARALEF 171
           T  ++APE++  +G+ +  D W+LG+ L+ +  G TPF  G D   E  LA I +     
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 172 PKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL 220
                 +V  TAKDL+S++L  DP +RL     A+ +  HP+   V+W  L
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHWDQL 287

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRL 197
             P+   V   AK LI  +L  +P++R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-------LANIVAR 167
           T  Y APE+++  G+    D W+LG+ L+ +  G  PF+  D  LT       +  I   
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              F  E    V   AKDLI  LL  DP +RL      S ++++ + Q
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL----KMSGLRYNEWLQ 275

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPFRG-------------- 154
           G+ EY+APE+V      + +     D W+LG+ L+ L  G  PF G              
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                +   +I     EFP +    +   AKDLIS+LL +D ++RL     A+ +  HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
            QG
Sbjct: 299 VQG 301

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIVSGEGHGSPV-----DWWTLGIFLFELFYGVTPFRG-------------- 154
           G+ EY+APE+V      + +     D W+LG+ L+ L  G  PF G              
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                +   +I     EFP +    +   AKDLIS+LL +D ++RL     A+ +  HP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
            QG
Sbjct: 299 VQG 301

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 104 PVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFR---GVDH 157
           P + +  +  GT  Y+APE+ S   G G+   VDWW+LG+  +EL  G  P+        
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
           +  +       + +P   A       L+ +LL  +P++R       S +++ P+   +NW
Sbjct: 226 KEIVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINW 280
Query: 218 --ALLRCTTPPFVP 229
                +   P F+P
Sbjct: 281 DAVFQKRLIPGFIP 294

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
           LGIV+RDLKPEN+L  S   D  IM++DF LS K +D             P +VL     
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
                  S +C  P  + P V   +P                                  
Sbjct: 176 -------STACGTPGYVAPEVLAQKP---------------------------------- 194
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
                     +   VD W++G+  + L  G  PF   +       I+    EF  P    
Sbjct: 195 ----------YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           +  +AKD I  L+ KDPE+R    +       HP+  G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
           LGIV+RDLKPEN+L  S   D  IM++DF LS K +D             P +VL     
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
                  S +C  P  + P V   +P  K                               
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
                         VD W++G+  + L  G  PF   +       I+    EF  P    
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           +  +AKD I  L+ KDPE+R    +       HP+  G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
           LGIV+RDLKPEN+L  S   D  IM++DF LS K +D             P +VL     
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
                  S +C  P  + P V   +P  K                               
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
                         VD W++G+  + L  G  PF   +       I+    EF  P    
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           +  +AKD I  L+ KDPE+R    +       HP+  G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 78/218 (35%), Gaps = 79/218 (36%)
Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYL 58
           LGIV+RDLKPEN+L  S   D  IM++DF LS K +D             P +VL     
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLS-KMED-------------PGSVL----- 175
Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
                  S +C  P  + P V   +P  K                               
Sbjct: 176 -------STACGTPGYVAPEVLAQKPYSK------------------------------- 197
Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF--PKEPA 176
                         VD W++G+  + L  G  PF   +       I+    EF  P    
Sbjct: 198 -------------AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD 244
Query: 177 VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           +  +AKD I  L+ KDPE+R    +       HP+  G
Sbjct: 245 ISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDH--ELTLANIVARALEF 171
           T  ++APE++  +G+ +  D W+LG+ L+    G TPF  G D   E  LA I +     
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 172 PKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL 220
                 +V  TAKDL+S+ L  DP +RL     A+ +  HP+   V+W  L
Sbjct: 243 SGGYWNSVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHWDQL 287

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 237 EYSIPKH--INPVAASLIQKMLQTDPTAR 263

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----DHELTLANIVARAL 169
           T  ++APE++  +G+    D W+LGI L+ +  G TPF        +  LT        L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                  V  TAKDL+S++L  DP +RL     A  +  HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 115 THEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-----DHELTLANIVARAL 169
           T  ++APE++  +G+    D W+LGI L+ +  G TPF        +  LT        L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
                  V  TAKDL+S++L  DP +RL     A  +  HP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           DV S +  GT  Y+APE+++ + +   VD W++G+  + L  G  PF   +       I+
Sbjct: 177 DVMSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
Query: 166 ARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
               EF  P    +  +AKD I  L+ KDP +R    + A     HP+  G
Sbjct: 236 KAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
            GT E+ APE+  G+  G   D W++G+  + L  G++PF G + + TL N+ +    ++
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL 197
                 +    KD I +LL  DP  R+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRM 297

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 114 GTHEYLAPEIV--SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           GT  ++APE++  + E +G   D W+ G+ L  L  G  PF GV+   T++ ++ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 172 --PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
             P    +   A+DL+S LL ++ + R  + +   A++H
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMR---ALQH 331

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
            GT E+ APE+  G+  G   D W++G+  + L  G++PF G + + TL N+ +    ++
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRL 197
                 +    KD I +LL  DP  R+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRM 403

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF-- 171
           GT  Y+APE+++ + +   VD W++G+  + L  G  PF           I     EF  
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES 228
Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
           P    +  +AKD I  LL KDP  R    K  S    HP+  G N AL R   P
Sbjct: 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 255 EYSIPKH--INPVAASLIQKMLQTDPTAR 281

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 257 EYSIPKH--INPVAASLIQKMLQTDPTAR 283

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 26/123 (21%)
Query: 114 GTHEYLAPEIV-----SGEGHGSPVDWWTLGIFLFELFYGVTPFRG-------------- 154
           G+ EY+APE+V         +    D W+LG+ L+ +  G  PF G              
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 155 -VDHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            V       +I     EFP +    + + AKDLIS+LL +D ++RL     A+ +  HP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 212 FQG 214
            QG
Sbjct: 299 VQG 301

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
           +GT  Y+APE++  + +    D W++G+ LF L  G  PF G   +  L  +      F 
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
            P+   V   AKDLI Q+L  D +RR+ + +   A++H
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQ---ALEH 292

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFR-GVDHELTL 161
           VD +     GT+E++ PE  S E   +G+ VD W+LGI L+ +FY V PF   +      
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 162 ANIVARALEFPKEPA---VPATAK--------------DLISQLLAKDPERRLGSTKGAS 204
            NI  + +E+P +      P T K              D +   L K+P  R+ S     
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS---ED 319
Query: 205 AIKHH 209
           A+KH 
Sbjct: 320 ALKHE 324

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I   
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               PK   +   A  LI ++L  DP  R
Sbjct: 231 EYSIPKH--INPVAASLIQKMLQTDPTAR 257

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF---RGVDHELTLANIVARALE 170
           GT  Y APEI+ G  +G  VD W++GI  + L  G  PF   RG   +     I+     
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG--DQFMFRRILNCEYY 269
Query: 171 F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           F  P    V   AKDL+ +L+  DP++RL + +       HP+  G
Sbjct: 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3   GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
            IV+RDLKPEN+L+ S   D  I + DF LS                             
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
                               +CF+   K K + G                     T  Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
           APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +     A + P+   +
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              AKDLI ++L   P  R+ +T+       HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCLE----HPWIQ 281

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT  Y+APE++  +GH   VD W+LG  L+ L  G  PF     + T   I   
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               P+   +   A  LI ++L  DP  R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3   GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
            IV+RDLKPEN+L+ S   D  I + DF LS                             
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
                               +CF+   K K + G                     T  Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
           APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +     A + P+   +
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              AKDLI ++L   P  R+ +T+       HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCL----EHPWIQ 281

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 80/216 (37%)
Query: 3   GIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLV 59
            IV+RDLKPEN+L+ S   D  I + DF LS                             
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLS----------------------------- 171
Query: 60  DHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYL 119
                               +CF+   K K + G                     T  Y+
Sbjct: 172 --------------------TCFQQNTKMKDRIG---------------------TAYYI 190
Query: 120 APEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALEFPKEPAV 177
           APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +     A + P+   +
Sbjct: 191 APEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI 249
Query: 178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              AKDLI ++L   P  R+ +T+       HP+ Q
Sbjct: 250 SDDAKDLIRKMLTFHPSLRITATQCL----EHPWIQ 281

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++  +GH   VD W+LG  L+ L  G  PF     + T   I   
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               P+   +   A  LI ++L  DP  R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++  +GH   VD W+LG  L+ L  G  PF     + T   I   
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               P+   +   A  LI ++L  DP  R
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR 284

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R     GT  Y+APE++  +GH   VD W+LG  L+ L  G  PF     + T   I   
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
               P+   +   A  LI ++L  DP  R
Sbjct: 242 EYSVPRH--INPVASALIRRMLHADPTLR 268

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D  S +  GT  Y+APE+   +      D W+ G+ ++ L  G  PF G   E       
Sbjct: 180 DEHSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT 238
Query: 166 ARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            +   +  E  P  P  A DL+ Q+L KDPERR      A+ + HH +F+
Sbjct: 239 YKEPNYAVECRPLTP-QAVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
           +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +       E
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
            P+   V  +AKDLI ++L   P  R+ +
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISA 282

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 36/87 (41%)
Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           MS  G + ++APE++         D W+ G+ L+EL  G  PFRG+D       +    L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
             P     P     L+      DP  R
Sbjct: 232 ALPIPSTCPEPFAKLMEDCWNPDPHSR 258

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
           +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +       E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
            P+   V  +AKDLI ++L   P  R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISA 276

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
           +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +       E
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
            P+   V  +AKDLI ++L   P  R+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISA 299

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
           +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +       E
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
            P+   V  +AKDLI ++L   P  R+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISA 300

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 278

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 279

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 373
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 374 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 418

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 404

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 111 SFVGTHEYLAPEI---VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVA 166
           +  GT  YLAPE+   V   G+   VD W+LG+ LF    G  PF     +++L + I +
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               F  E    V   A DL+ +LL  DP+ R  + +       HP+ Q
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL----RHPWLQ 285

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R GS K    +  H F +
Sbjct: 227 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R GS K    +  H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 44/141 (31%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR---- 167
           +V T  Y APE++ G G+ + VD W++G  + EL  G   F+G DH      ++ +    
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 168 ALEF---------------PKEPAVP---------------------ATAKDLISQLLAK 191
           + EF               PK P +                      + A+DL+S++L  
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 192 DPERRLGSTKGASAIKHHPFF 212
           DP++R+   +       HP+ 
Sbjct: 305 DPDKRISVDEAL----RHPYI 321

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-- 174
           EY APE+   +   +  D W+LG  ++ L  G+ PF    ++  + NI+     F +E  
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 175 PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             +   A D + +LL K+ + R+     AS    HP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--ARALE 170
           +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +       E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGS 199
            P+   V  +AKDLI + L   P  R+ +
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISA 276

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +    VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R GS K    +  H F +
Sbjct: 227 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +    VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R GS K    +  H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELLQHQFLK 274

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +    VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R GS K    +  H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 88/242 (36%), Gaps = 94/242 (38%)
Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
            +++RDLKP N+L+ S+  + + DF L+   D+SA+      D + P             
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA------DNSEP------------- 172
Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                        TGQ SG            + FV T  Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MVEFVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
           + ++   +   +D W+ G  L ELF    + P R   H+L L   I+             
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
             RA E+    P  PA P             DL+ ++L  DP +R+ + +       HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
            Q
Sbjct: 309 LQ 310

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
           S +GT  Y+A E++ G GH    +D ++LGI  FE+ Y   PF  G++    L  + + +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
           +EFP   +       K +I  L+  DP +R G+
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
           S +GT  Y+A E++ G GH    +D ++LGI  FE+ Y   PF  G++    L  + + +
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
           +EFP   +       K +I  L+  DP +R G+
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLANIV 165
           S VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF       D+  T+  I+
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +     P +  +      LIS++   DP  R+   +    IK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPE----IKTHSWF 278

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 240
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 241 NCPPTLYSLMTKCWAYDPSRR 261

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 263
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRR 284

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 237
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 238 NCPPTLYSLMTKCWAYDPSRR 258

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 238
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 239 NCPPTLYSLMTKCWAYDPSRR 259

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 232
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 233 NCPPTLYSLMTKCWAYDPSRR 253

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 235
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 236 NCPPTLYSLMTKCWAYDPSRR 256

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y++P+++ G  +G   D W+ G+ ++ L  G  PF        +  I      FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
           ++    V   A+ LI +LL K P++R+ S +   A++H  F
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQ---ALEHEWF 265

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 87/242 (35%), Gaps = 94/242 (38%)
Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
            +++RDLKP N+L+ S+  + + DF L+   D+SA      +D + P             
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA------ADNSEP------------- 172
Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                        TGQ SG              +V T  Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MTEYVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
           + ++   +   +D W+ G  L ELF    + P R   H+L L   I+             
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
             RA E+    P  PA P             DL+ ++L  DP +R+ + +       HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
            Q
Sbjct: 309 LQ 310

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           VGT  Y++P+++ G  +G   D W+ G+ ++ L  G  PF        +  I      FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 173 KEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
           ++    V   A+ LI +LL K P++R+ S +   A++H  F
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQ---ALEHEWF 282

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 363 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 404

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 114 GTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           G+  Y APE++SG  +  P VD W+ G+ L+ L  G  PF   DH  TL   +   + + 
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYT 235
Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFV---P 229
            +   P+    L+  +L  DP +R         I+ H +F+           P ++    
Sbjct: 236 PQYLNPSVIS-LLKHMLQVDPMKR----ATIKDIREHEWFKQ--------DLPKYLFPED 282
Query: 230 PPFNRELVSDESCPET 245
           P ++  ++ DE+  E 
Sbjct: 283 PSYSSTMIDDEALKEV 298

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 46/142 (32%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           +V T  Y APE++ G G+   VD W++G  + EL  G   F+G DH +   N V   L  
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH-IDQWNKVIEQLGT 241
Query: 172 P-----------------KEPAVP------------------------ATAKDLISQLLA 190
           P                   PA P                        + A+DL+S++L 
Sbjct: 242 PSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLV 301
Query: 191 KDPERRLGSTKGASAIKHHPFF 212
            DP++R+   +       HP+ 
Sbjct: 302 IDPDKRISVDEAL----RHPYI 319

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 615
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRR 636

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 117 EYLAPEIVSGEGHGSPVDWWTLGIFLFE-LFYGVTPFRGVDHELTLANIVARALEFPKEP 175
           +++APE ++     S  D W  G+ ++E L +GV PF+GV +   +  I       P  P
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPP 615
Query: 176 AVPATAKDLISQLLAKDPERR 196
             P T   L+++  A DP RR
Sbjct: 616 NCPPTLYSLMTKCWAYDPSRR 636

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 241 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 286 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 327

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           FVGT +YLAPE++  + +   VD+W+ G   FE   G  PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           FVGT +YLAPE++  + +   VD+W+ G   FE   G  PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 243 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 290
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 291 HTSRVLKEDK 300

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 232 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 287
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 336
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 337 HTSRVLKEDK 346

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 290
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 291 HTSRVLKEDK 300

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 293
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 294 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 342
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 343 HTSRVLKEDK 352

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 292
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 293 HTSRVLKEDK 302

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 242
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 243 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 291
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 292 HTSRVLKEDK 301

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 292
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 293 HTSRVLKEDK 302

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 248
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 249 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 297
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 298 HTSRVLKEDK 307

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARA 168
           S +GT  Y+A E++ G GH    +D ++LGI  FE  Y   PF  G +    L  + + +
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVS 245
Query: 169 LEFP--KEPAVPATAKDLISQLLAKDPERRLGS 199
           +EFP   +       K +I  L+  DP +R G+
Sbjct: 246 IEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGA 278

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 257
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 258 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 306
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 307 HTSRVLKEDK 316

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 247
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 248 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 296
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 297 HTSRVLKEDK 306

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG----VDHELTLAN 163
           R    VGT  ++APE++S   +G  VD W+LGI + E+  G  P+         ++   N
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
           +  R     K   V  + K  + +LL +DP +R      A+ +  HPF 
Sbjct: 236 LPPRLKNLHK---VSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 33/137 (24%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
           S V T  Y APE++    + +PVD W++G    E+F     FRG   VD    + +++  
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
             E  +P++ A+P  A                    KDL+ + L  +P +R+ +    S 
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQGVNWALLRC 222
              HP+FQ +     RC
Sbjct: 297 ---HPYFQDLE----RC 306

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+ ++ L  G  PF   +H L ++      I     EF 
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 249
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R+  T+      +HP+       +++ T  P  P 
Sbjct: 250 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITE----FMNHPW-------IMQSTKVPQTPL 298
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 299 HTSRVLKEDK 308

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G+ + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G+ + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 56/195 (28%)
Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQN-EYLVDH 61
           G+++RD+KP N+L+ ++ H+ + DF LS     S  N + +++ N P+++ +N E   D 
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLS----RSFVNIRRVTN-NIPLSINENTENFDDD 183
Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
            P  +                                             +V T  Y AP
Sbjct: 184 QPILT--------------------------------------------DYVATRWYRAP 199
Query: 122 EIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           EI+ G   +   +D W+LG  L E+  G   F G      L  I+   ++FP    V + 
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VIDFPSNEDVESI 258
Query: 181 ----AKDLISQLLAK 191
               AK +I  L  K
Sbjct: 259 QSPFAKTMIESLKEK 273

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 33/137 (24%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
           S V T  Y APE++    + +PVD W++G    E+F     FRG   VD    + +++  
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
             E  +P++ A+P  A                    KDL+ + L  +P +R+ +    S 
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQGVNWALLRC 222
              HP+FQ +     RC
Sbjct: 297 ---HPYFQDLE----RC 306

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 68/190 (35%)
Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G+++RDLKP N+    D  + + DF L    D       +++                  
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP----------------- 180
Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                        +PA +         + TGQ                  VGT  Y++PE
Sbjct: 181 -------------MPAYA---------RHTGQ------------------VGTKLYMSPE 200
Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFR-GVDHELTLANIVARALEFP-----KEPA 176
            + G  +   VD ++LG+ LFEL Y   PF   ++   TL ++  R L+FP     K P 
Sbjct: 201 QIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV--RNLKFPPLFTQKYPC 255
Query: 177 VPATAKDLIS 186
                +D++S
Sbjct: 256 EYVMVQDMLS 265

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSF-------- 112
           H    + + + P  I+   S +      +KK  + S     V  VD  S +F        
Sbjct: 154 HDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTI 213
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           V T  Y APE++   G   P D W++G  +FE + G T F+  D+   LA
Sbjct: 214 VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 29/128 (22%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDHELTLANIVAR 167
           S V T  Y APE++    + +PVD W++G    E+F     FRG   VD    + +++  
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 168 ALE--FPKEPAVPATA--------------------KDLISQLLAKDPERRLGSTKGASA 205
             E  +P++ A+P  A                    KDL+ + L  +P +R+ +    S 
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS- 296
Query: 206 IKHHPFFQ 213
              HP+FQ
Sbjct: 297 ---HPYFQ 301

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           S VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF   +        + R L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
                 P    +    + LIS++   DP +R+   +    I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           S VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF   +        + R L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
                 P    +    + LIS++   DP +R+   +    I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           S VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF   +        + R L
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
                 P    +    + LIS++   DP +R+   +    I++H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 276

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 111 SFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           +F GT +Y+APEI+     G+G   D W+LG  + E+  G  PF  +         V   
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 169 LEFPKEP-AVPATAKDLISQLLAKDPERR 196
              P+ P ++ A AK  I +    DP++R
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKR 270

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A    R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
               P   +   + A    ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A    R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
               P   +   + A    ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 86/242 (35%), Gaps = 94/242 (38%)
Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
            +++RDLKP N+L+ S+  + + DF L+   D+SA      +D + P             
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA------ADNSEP------------- 172
Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                        TGQ SG               V T  Y APE
Sbjct: 173 -----------------------------TGQQSG-----------MTEXVATRWYRAPE 192
Query: 123 I-VSGEGHGSPVDWWTLGIFLFELFYG--VTPFRGVDHELTLA-NIVA------------ 166
           + ++   +   +D W+ G  L ELF    + P R   H+L L   I+             
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIE 252
Query: 167 --RALEF----PKEPAVPATAK---------DLISQLLAKDPERRLGSTKGASAIKHHPF 211
             RA E+    P  PA P             DL+ ++L  DP +R+ + +       HP+
Sbjct: 253 SPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE----HPY 308
Query: 212 FQ 213
            Q
Sbjct: 309 LQ 310

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A    R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
               P   +   + A    ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       FV T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 178 AGTSFMMVP-------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 156 DH 157
           DH
Sbjct: 231 DH 232

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A    R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
               P   +   + A    ++ + LAK+PE R
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A    R
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 250
Query: 168 ALEFP---KEPAVPATAKDLISQLLAKDPERR 196
               P   +   + A    ++ + LAK+PE R
Sbjct: 251 EDPIPPSARHEGLSADLDAVVLKALAKNPENR 282

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 111 SFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           +F GT +Y+APEI+     G+G   D W+LG  + E+  G  PF  +         V   
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 227
Query: 169 LEFPKEP-AVPATAKDLISQLLAKDPERR 196
              P+ P ++ A AK  I +    DP++R
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKR 256

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  Y++PE +   G+    D W+LG  L+E+    +PF G    L          +
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254
Query: 171 FPKEPA--VPATAKDLISQLLAKDPERR 196
           +P  P+       + L++  +  DPE+R
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKR 282

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           +D  + SFVGT  Y++PE + G  +    D W++G+ L E+  G  P       + +  +
Sbjct: 175 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFEL 234
Query: 165 VARALEFPKEPAVPATA-----KDLISQLLAKDPERR 196
           +   +  P  P +P+       +D +++ L K+P  R
Sbjct: 235 LDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAER 270

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 111 SFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           S VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF   +        + R L
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 170 E----FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
                 P    +    + LIS++   DP +R+   +    I++H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 113 VGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE- 170
           VGT  Y+APE++   E  G   D W+ G+ L+ +  G  PF   +        + R L  
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 171 ---FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF 212
               P    +    + LIS++   DP +R+   +    I++H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPE----IRNHEWF 277

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
            VGT  ++APE++S   + + VD W+LGI + E+  G  P+       +    + R  + 
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRDS 256
Query: 172 P-----KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
           P         V    +D + ++L +DP+ R      A  +  HPF   +   L  C  P
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECLVP 309

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 177 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 156 DH 157
           DH
Sbjct: 230 DH 231

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR---------GVDHELTLANIVARA 168
           Y+APE++  E +    D W+LG+ ++ L  G  PF          G+   + L       
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 251
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
              P+   V   AK LI  LL  DP  RL  T+      +HP+   +N +++   TP
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ----FMNHPW---INQSMVVPQTP 301

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S + T +Y APE++   G     D W+ G  L EL+ G   FR  +H   LA + +    
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQP 277
Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI 206
            PK     AT  +  S+ + KD E +L   + AS+I
Sbjct: 278 IPKNMLYEATKTNG-SKYVNKD-ELKLAWPENASSI 311

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFR---------GVDHELTLANIVARA 168
           Y+APE++  E +    D W+LG+ ++ L  G  PF          G+   + L       
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 232
Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
              P+   V   AK LI  LL  DP  RL  T+      +HP+   +N +++   TP
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ----FMNHPW---INQSMVVPQTP 282

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  + + +  Y APE++ G  +G P+D W+LG  L EL  G     G D    LA ++  
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-E 313
Query: 168 ALEFPKEPAVPAT--AKDLIS 186
            L  P +  + A+  AK+ +S
Sbjct: 314 LLGMPSQKLLDASKRAKNFVS 334

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  + + +  Y APE++ G  +G P+D W+LG  L EL  G     G D    LA ++  
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-E 313
Query: 168 ALEFPKEPAVPAT--AKDLIS 186
            L  P +  + A+  AK+ +S
Sbjct: 314 LLGMPSQKLLDASKRAKNFVS 334

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 96  SGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV 155
           +G  F++ P       +V T  Y APE++ G G+   VD W++G  + E+  G   F G 
Sbjct: 176 AGTSFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
Query: 156 DH 157
           DH
Sbjct: 229 DH 230

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
           +GT  Y+APE++  + +    D W+ G+ L+ L  G  PF G   +  L  +      F 
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            P    V   AK L+  +L  +P +R+ + +      +HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL----NHPW 279

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 81/213 (38%)
Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
           IV+RDLKPEN+L+  + ++ + DF LS           I++D N                
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS----------NIMTDGN---------------- 162
Query: 64  FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
           F   SC  PN                                            Y APE+
Sbjct: 163 FLKTSCGSPN--------------------------------------------YAAPEV 178
Query: 124 VSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHEL--TLANIVARALEFPKEPAVPAT 180
           ++G+ +  P VD W+ GI L+ +  G  PF   D E    L   V   +    +   P  
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKKVNSCVYVMPDFLSPG- 234
Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           A+ LI +++  DP +R+        I+  P+F 
Sbjct: 235 AQSLIRRMIVADPMQRI----TIQEIRRDPWFN 263

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
            ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D   ++A    
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPDSVAYQHV 232
Query: 167 RALEFP---KEPAVPATAKDLISQLLAKDPERR 196
           R    P   +   + A    ++ + LAK+PE R
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKNPENR 265

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           +D  + SFVGT  Y+APE + G  +    D W++G+ L EL  G  P 
Sbjct: 166 IDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAV 177
           Y APE++ G  +G P+D W+LG  L EL  G     G D    LA ++   L  P +  +
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI-ELLGMPXQKLL 323
Query: 178 PAT--AKDLIS 186
            A+  AK+ +S
Sbjct: 324 DASKRAKNFVS 334

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 34/138 (24%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           D     +V T  Y APE++    H    VD W++G  + E+  G T F+G D+   L  I
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 165 VAR----ALEFPKE----------PAVPAT---------------AKDLISQLLAKDPER 195
           +        EF ++           ++P T               A DL+ ++L  D ++
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 196 RLGSTKGASAIKHHPFFQ 213
           RL + +  +    HPFF+
Sbjct: 297 RLTAAQALT----HPFFE 310

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF- 171
           +GT  Y+APE++  + +    D W+ G+ L+ L  G  PF G   +  L  +      F 
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            P    V   AK L+  +L  +P +R+ + +      +HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL----NHPW 262

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 34/138 (24%)
Query: 106 DVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           D     +V T  Y APE++    H    VD W++G  + E+  G T F+G D+   L  I
Sbjct: 195 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
Query: 165 VAR----ALEFPKE-------------------------PAVPATAKDLISQLLAKDPER 195
           +        EF ++                         P     A DL+ ++L  D ++
Sbjct: 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 314
Query: 196 RLGSTKGASAIKHHPFFQ 213
           RL + +  +    HPFF+
Sbjct: 315 RLTAAQALT----HPFFE 328

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  + +      +EFP  P      +D++   L +DP++R+        +  HP+ Q
Sbjct: 231 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 281

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
           +  + +      +EFP  P      +D++   L +DP++R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 313

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  + +      +EFP  P      +D++   L +DP++R+        +  HP+ Q
Sbjct: 227 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 277

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           +F G+  Y APE+  G+ +  P VD W+LG+ L+ L  G  PF G + +     ++    
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
             P    +    ++L+ + L  +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
           +  + +      +EFP  P      +D++   L +DP++R+
Sbjct: 228 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 266

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           +F G+  Y APE+  G+ +  P VD W+LG+ L+ L  G  PF G + +     ++    
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
             P    +    ++L+ + L  +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           +F G+  Y APE+  G+ +  P VD W+LG+ L+ L  G  PF G + +     ++    
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
             P    +    ++L+ + L  +P +R
Sbjct: 231 RIP--FYMSTDCENLLKKFLILNPSKR 255

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 160 TLANIVA---RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  + +      +EFP  P      +D++   L +DP++R+        +  HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRL 197
           +  + +      +EFP  P      +D++   L +DP++R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRI 313

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 111 SFVGTHEYLAPEIV----SGEGHGSPV-------DWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +    S   +G          D W+LG  L+ + YG TPF+ + +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 160 TLANIV---ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  + +      +EFP  P      +D++   L +DP++R+        +  HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH 157
           V T  Y APE++ G G+   VD W++G  + E+  G   F G DH
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--RALE 170
           VGT  Y++PE + G  +   VD ++LG+ LFEL Y  +       ++    I+   R L+
Sbjct: 237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST------QMERVRIITDVRNLK 290
Query: 171 FP-----KEPAVPATAKDLIS 186
           FP     K P      +D++S
Sbjct: 291 FPLLFTQKYPQEHMMVQDMLS 311

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA-----NIVARALEF- 171
           Y+APE++  E +    D W+LG+  + L  G  PF   +H L ++      I     EF 
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS-NHGLAISPGXKTRIRXGQYEFP 287
Query: 172 -PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P+   V    K LI  LL  +P +R   T+      +HP+       + + T  P  P 
Sbjct: 288 NPEWSEVSEEVKXLIRNLLKTEPTQRXTITE----FXNHPW-------IXQSTKVPQTPL 336
Query: 231 PFNRELVSDE 240
             +R L  D+
Sbjct: 337 HTSRVLKEDK 346

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF 152
           +D  + SFVGT  Y++PE + G  +    D W++G+ L E+  G  P 
Sbjct: 218 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 111 SFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           +F G+  Y APE+  G+ +  P VD W+LG+ L+ L  G  PF G + +     ++    
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 170 EFPKEPAVPATAKDLISQLLAKDPERR 196
             P    +    ++L+ + L  +P +R
Sbjct: 224 RIP--FYMSTDCENLLKKFLILNPSKR 248

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-48
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-12
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-46
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-12
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-45
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-45
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-12
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-45
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-45
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-12
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-44
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-44
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-43
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	9e-11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-43
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-43
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-43
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-42
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-42
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-42
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-42
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-42
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-40
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-12
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-40
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-40
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	8e-10
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-40
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-10
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-39
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-32
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	4e-32
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-07
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-31
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-27
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-25
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-24
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-22
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-22
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-22
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-22
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	8e-22
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-22
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-21
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-21
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-21
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-21
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-21
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	7e-21
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-21
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-20
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-20
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	9e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-20
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-20
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-20
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-20
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-20
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-20
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	9e-20
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-19
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-19
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-19
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-19
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-08
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-19
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-19
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-19
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	9e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-19
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-19
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-19
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-19
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-19
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-18
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-18
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	6e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-18
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-18
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-17
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-17
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-17
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	8e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-17
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-17
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	9e-17
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-16
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-16
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-16
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	8e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-15
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-15
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	8e-15
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-14
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-13
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-12
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	9e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-11
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-11
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-10
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-09
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-09
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-08
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	4e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	9e-07
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-06
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-06
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-06
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-06
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-06
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	8e-06
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	9e-04
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	9e-06
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-06
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-05
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-05
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-05
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	8e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-04
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-04
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	7e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	8e-04

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  161 bits (410), Expect = 1e-48
 Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 4/133 (3%)

Query: 99  EFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE 158
               E    R+ SFVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  
Sbjct: 179 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY 238

Query: 159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQGVN 216
           L    I+    +FP        A+DL+ +LL  D  +RLG    +G   +K HPFF+ V 
Sbjct: 239 LIFQKIIKLEYDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 296

Query: 217 WALLRCTTPPFVP 229
           W  L   TPP + 
Sbjct: 297 WENLHQQTPPKLT 309

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 63.0 bits (154), Expect = 6e-12
 Identities = 17/39 (43%), Positives = 24/39 (61%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
            GI++RDLKPEN+L+  D HI +TDF  +      +  A
Sbjct: 149 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  155 bits (395), Expect = 3e-46
 Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 12/153 (7%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
              + +F GT EY+APEI+   GH   VDWW+LG  ++++  G  PF G + + T+  I+
Sbjct: 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RC 222
              L  P    +   A+DL+ +LL ++   RLG+    A  ++ HPFF+ +NW  L  R 
Sbjct: 235 KCKLNLPPY--LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292

Query: 223 TTPPFVPPPFNRELVS-------DESCPETPVE 248
             PPF P   + E VS        ++  ++P +
Sbjct: 293 VEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD 325

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 62.9 bits (154), Expect = 9e-12
 Identities = 17/29 (58%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLKPEN+++   GH+ LTDF L 
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLC 168

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  153 bits (390), Expect = 2e-45
 Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 5/129 (3%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V   + +  GT +Y+APE+VS + +   +DWW+ GI ++E+  G TPF   +   T   I
Sbjct: 156 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           +   L FP  P      KDL+S+L+ +D  +RLG+ + G   +K+HP+F+ V W  L  R
Sbjct: 216 LNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSR 273

Query: 222 CTTPPFVPP 230
               P+ PP
Sbjct: 274 NIETPYEPP 282

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
             I+YRDLKPEN+L+  +GHI +TDF  +    D
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  153 bits (389), Expect = 3e-45
 Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 5/136 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           + ++ SF GT EY+APE+V+  GH    DWW+ G+ +FE+  G  PF+G D + T+  I+
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RC 222
              L  P    +   A+ L+  L  ++P  RLG+   G   IK H FF  ++W  L  R 
Sbjct: 240 KAKLGMP--QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297

Query: 223 TTPPFVPPPFNRELVS 238
             PPF P     E   
Sbjct: 298 IHPPFKPATGRPEDTF 313

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 63.3 bits (155), Expect = 5e-12
 Identities = 21/29 (72%), Positives = 25/29 (86%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGI+YRDLKPEN+L+  +GHI LTDF LS
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLS 173

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  153 bits (389), Expect = 3e-45
 Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 5/129 (3%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V  R+ +  GT E LAPEI+  +G+   VDWW LG+ ++E+  G  PF           I
Sbjct: 191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           V+  + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R
Sbjct: 251 VSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQR 308

Query: 222 CTTPPFVPP 230
               PF+P 
Sbjct: 309 KVEAPFIPK 317

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
           L ++YRDLKPEN+L+   G+I +TDF  + +   
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  154 bits (392), Expect = 5e-45
 Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
            VR  + VGT +Y++PE++  +G    +G   DWW++G+FL+E+  G TPF       T 
Sbjct: 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 282

Query: 162 ANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL 219
           + I+    +L FP +  +   AK+LI   L  D E RLG   G   IK H FF+   WA 
Sbjct: 283 SKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRLGR-NGVEEIKRHLFFKNDQWAW 340

Query: 220 L--RCTTPPFVPP 230
              R T  P VP 
Sbjct: 341 ETLRDTVAPVVPD 353

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 13/35 (37%), Positives = 23/35 (65%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
           +G ++RD+KP+N+L+   GH+ L DF   +K +  
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  153 bits (388), Expect = 1e-44
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 4/126 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           +  + +F GT EYLAPE++  + +   VDWW LG  L+E+ YG+ PF   +      NI+
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
            + L+    P +  +A+ L+  LL KD  +RLG+      IK H FF  +NW  L  +  
Sbjct: 253 NKPLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKI 310

Query: 224 TPPFVP 229
           TPPF P
Sbjct: 311 TPPFNP 316

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 21/29 (72%), Positives = 24/29 (82%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           L IVYRDLKPEN+L+ S GHI+LTDF L 
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGLC 186

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  152 bits (387), Expect = 2e-44
 Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 12/134 (8%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEG-------HGSPVDWWTLGIFLFELFYGVTPFRGVDHE 158
            VRS+  VGT +YL+PEI+   G       +G   DWW LG+F +E+FYG TPF      
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276

Query: 159 LTLANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
            T   IV           +  VP  A+D I +LL   PE RLG   GA   + HPFF G+
Sbjct: 277 ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGR-GGAGDFRTHPFFFGL 334

Query: 216 NWALLRCTTPPFVP 229
           +W  LR + PPF P
Sbjct: 335 DWDGLRDSVPPFTP 348

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
           LG V+RD+KP+N+L+   GHI L DF   LK
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  148 bits (377), Expect = 2e-43
 Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
                +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL--RC 222
              + FP+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW  +  + 
Sbjct: 219 MEEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276

Query: 223 TTPPFVPPPFNRELVS-------DESCPETPVE 248
             PPF P   +             +S   TP +
Sbjct: 277 LLPPFKPQVTSEVDTRYFDDEFTAQSITITPPD 309

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 59.9 bits (146), Expect = 9e-11
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             +VYRD+K EN+++  DGHI +TDF L 
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLC 152

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  150 bits (381), Expect = 3e-43
 Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGE-----GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
            V+S   VGT +Y++PEI+         +G   DWW+LG+ ++E+ YG TPF       T
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289

Query: 161 LANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
              I+     F    +   V   AKDLI +L+    E RLG   G    K HPFF G++W
Sbjct: 290 YGKIMNHKERFQFPTQVTDVSENAKDLIRRLI-CSREHRLGQ-NGIEDFKKHPFFSGIDW 347

Query: 218 ALLRCTTPPFVPP 230
             +R    P++P 
Sbjct: 348 DNIRNCEAPYIPE 360

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 16/31 (51%), Positives = 22/31 (70%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK 32
           L  V+RD+KP+N+L+  +GHI L DF   LK
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  148 bits (376), Expect = 4e-43
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 13/154 (8%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            V + +F GT +Y+APEI+    +G  VDWW +G+ L+E+  G  PF   + +     I+
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQGVNWALL--R 221
              + +P    +   A  ++   + K+P  RLGS    G  AI  HPFF+ ++WA L  R
Sbjct: 238 NDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHR 295

Query: 222 CTTPPFVPPPFNRELVS-------DESCPETPVE 248
              PPF P   +RE VS        E    TP++
Sbjct: 296 QIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPID 329

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLK +NVL+  +GH  L DF + 
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMC 171

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  147 bits (374), Expect = 7e-43
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            V + +F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+
Sbjct: 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RC 222
              + +PK   +   A  +   L+ K P +RLG   +G   IK H FF+ ++W  L  + 
Sbjct: 235 EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKE 292

Query: 223 TTPPFVP 229
             PP+ P
Sbjct: 293 IQPPYKP 299

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 59.9 bits (146), Expect = 9e-11
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLK +NV++ S+GHI + DF + 
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMC 168

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  148 bits (376), Expect = 2e-42
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 5/136 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
                +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+
Sbjct: 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL--RC 222
              + FP    +   AK L+S LL KDP++RLG  ++ A  I  H FF G+ W  +  + 
Sbjct: 363 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKK 420

Query: 223 TTPPFVPPPFNRELVS 238
            +PPF P   +     
Sbjct: 421 LSPPFKPQVTSETDTR 436

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             +VYRDLK EN+++  DGHI +TDF L 
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLC 296

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  150 bits (381), Expect = 2e-42
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
                  VGT  Y+APE+V  E +    DWW LG  L+E+  G +PF+    ++    + 
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398

Query: 166 ARALEFPKE--PAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL-- 220
               E P+E        A+ L SQLL KDP  RLG     A  +K HP F+ +N+  L  
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458

Query: 221 RCTTPPFVPPP 231
               PPF P P
Sbjct: 459 GMLEPPFKPDP 469

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 57.9 bits (140), Expect = 6e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             IVYRDLKPEN+L+   GHI ++D  L+
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLA 333

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  149 bits (378), Expect = 4e-42
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA--- 162
             ++  + GT  ++APE++ GE +   VD++ LG+ L+E+     PFR    ++      
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402

Query: 163 -NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL 220
             ++ +A+ +P +      +KD    LL KDPE+RLG        ++ HP F+ ++W  L
Sbjct: 403 QRVLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460

Query: 221 --RCTTPPFVPPP 231
                TPPFVP  
Sbjct: 461 EAGMLTPPFVPDS 473

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             I+YRDLKPENVL+  DG++ ++D  L+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA 336

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  150 bits (381), Expect = 5e-42
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 9/145 (6%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRG---VDH 157
            +    +  + VGTH Y+APE++  G  + S  DW++LG  LF+L  G +PFR     D 
Sbjct: 340 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399

Query: 158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVN 216
                  +  A+E P   +     + L+  LL +D  RRLG   +GA  +K  PFF+ ++
Sbjct: 400 HEIDRMTLTMAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457

Query: 217 WALL--RCTTPPFVPPPFNRELVSD 239
           W ++  +   PP +PP         
Sbjct: 458 WQMVFLQKYPPPLIPPRGEVNAADA 482

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 18/82 (21%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA----------QIISDQNP--- 48
             +VYRDLKP N+L+   GH+ ++D  L+        +A          +++        
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDS 370

Query: 49  -----PIAVLQNEYLVDHPPFT 65
                 +  +  + L  H PF 
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFR 392

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  145 bits (367), Expect = 7e-42
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D ++ +F GT +Y+APEI+ G+ +   VDWW+ G+ L+E+  G +PF G D E    +I 
Sbjct: 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCT 223
                +P+   +   AKDL+ +L  ++PE+RLG       I+ HP F+ +NW  L  +  
Sbjct: 232 MDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV---RGDIRQHPLFREINWEELERKEI 286

Query: 224 TPPFVPPPFNRELVS-------DESCPETPVE 248
            PPF P   +    S       +E    +  +
Sbjct: 287 DPPFRPKVKSPFDCSNFDKEFLNEKPRLSFAD 318

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GIVYRDLK +N+L+  DGHI + DF + 
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMC 165

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  141 bits (357), Expect = 2e-40
 Identities = 56/142 (39%), Positives = 76/142 (53%), Gaps = 11/142 (7%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA- 162
             R+  F GT EY+AP+IV G   GH   VDWW+LG+ ++EL  G +PF     + + A 
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273

Query: 163 ---NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWA 218
               I+     +P    + A AKDLI +LL KDP++RLG   + A  IK H FFQ +NW 
Sbjct: 274 ISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD 331

Query: 219 LL--RCTTPPFVPPPFNRELVS 238
            L  +    PF P   +   VS
Sbjct: 332 DLAAKKVPAPFKPVIRDELDVS 353

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 19/29 (65%), Positives = 26/29 (89%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           LGI+YRD+K EN+L+ S+GH++LTDF LS
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLS 206

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  141 bits (358), Expect = 3e-40
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 13/133 (9%)

Query: 106 DVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-- 160
           + +  +  GT  Y+APE+ S   G G+   VDWW+LG+  +EL  G  P+       +  
Sbjct: 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE 227

Query: 161 -LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL 219
            +       + +P   A       L+ +LL  +P++R       S +++ P+   +NW  
Sbjct: 228 IVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFS---QLSDVQNFPYMNDINWDA 282

Query: 220 L--RCTTPPFVPP 230
           +  +   P F+P 
Sbjct: 283 VFQKRLIPGFIPN 295

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 12/29 (41%), Positives = 23/29 (79%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             I++RD+KP+N+L+   GH+ +TDF+++
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIA 162

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  145 bits (367), Expect = 3e-40
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            V + +F GT +Y+APEI++ + +G  VDWW  G+ L+E+  G  PF G D +    +I+
Sbjct: 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RC 222
              + +PK   +   A  +   L+ K P +RLG   +G   IK H FF+ ++W  L  + 
Sbjct: 556 EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKE 613

Query: 223 TTPPFVP 229
             PP+ P
Sbjct: 614 IQPPYKP 620

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 57.7 bits (139), Expect = 8e-10
 Identities = 15/29 (51%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLK +NV++ S+GHI + DF + 
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMC 489

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  140 bits (355), Expect = 4e-40
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 22/163 (13%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF---------RGVD 156
              + +F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF             
Sbjct: 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223

Query: 157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQG 214
            +     I+ + +  P+   +   A  ++   L KDP+ RLG     G + I+ HPFF+ 
Sbjct: 224 EDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281

Query: 215 VNWALL--RCTTPPFVPPPFNRELVS-------DESCPETPVE 248
           V+W ++  +   PPF P       +        +E    TP +
Sbjct: 282 VDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDD 324

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 17/29 (58%), Positives = 23/29 (79%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLK +NVL+ S+GHI LTD+ + 
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 157

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  139 bits (352), Expect = 3e-39
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 22/163 (13%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF---------RGVD 156
              + +F GT  Y+APEI+ GE +G  VDWW LG+ +FE+  G +PF             
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266

Query: 157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS--TKGASAIKHHPFFQG 214
            +     I+ + +  P+   +   A  ++   L KDP+ RLG     G + I+ HPFF+ 
Sbjct: 267 EDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324

Query: 215 VNWALL--RCTTPPFVPPPFNRELVS-------DESCPETPVE 248
           V+W ++  +   PPF P       +        +E    TP +
Sbjct: 325 VDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDD 367

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 17/29 (58%), Positives = 23/29 (79%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            GI+YRDLK +NVL+ S+GHI LTD+ + 
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 200

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  119 bits (300), Expect = 1e-32
 Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           V    +R  +  GT +YL PE++ G+ H   VD W  G+  +E   G+ PF    H  T 
Sbjct: 162 VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
             IV   L+FP  P +   +KDLIS+LL   P +RL        +  HP+ +    A  R
Sbjct: 222 RRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQRLPLKG----VMEHPWVK----ANSR 271

Query: 222 CTTPPFVPP 230
              PP    
Sbjct: 272 RVLPPVYQS 280

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            +++RD+KPEN+L+   G + + DF  S+     
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  117 bits (296), Expect = 4e-32
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 6/123 (4%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           + V     R     GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ 
Sbjct: 155 WSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214

Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL 219
           T   I      FP    V   A+DLIS+LL  +P +R    +    +  HP+    +   
Sbjct: 215 TYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPMLRE----VLEHPWITANSSKP 268

Query: 220 LRC 222
             C
Sbjct: 269 SNC 271

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            +++RD+KPEN+L+ S G + + DF  S+    S
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  117 bits (294), Expect = 1e-31
 Identities = 42/214 (19%), Positives = 72/214 (33%), Gaps = 64/214 (29%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI++RDLKP N+ +    ++ + DF L+     S    ++ S   P              
Sbjct: 136 GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP-------------- 181

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                         G                     T  Y+A E
Sbjct: 182 --------------------GSSDNLTSAIG---------------------TAMYVATE 200

Query: 123 IVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE--PAVPA 179
           ++ G GH    +D ++LGI  FE+ Y      G++    L  + + ++EFP +       
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMK 258

Query: 180 TAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             K +I  L+  DP +R     GA  + +  +  
Sbjct: 259 VEKKIIRLLIDHDPNKRP----GARTLLNSGWLP 288

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  106 bits (267), Expect = 2e-27
 Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 24/136 (17%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRG-VDHELTLA 162
           D +     GT+E++ PE  S E   +G+ VD W+LGI L+ +FY V PF   +       
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFN 263

Query: 163 NIVARALEFPKEPA-----------------VPATAKDLISQLLAKDPERRLGSTKGASA 205
           NI  + +E+P +                   +     D +   L K+P  R+ S      
Sbjct: 264 NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED---- 319

Query: 206 IKHHPFFQGVNWALLR 221
              H +    N   LR
Sbjct: 320 ALKHEWLADTNIEDLR 335

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
             I +RD+KP N+L+  +G + L+DF  S    D 
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 99.1 bits (248), Expect = 4e-25
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 6/100 (6%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT  Y++PEI +   HG   D W+LG   + L  G  PF     + TL  +V    E P 
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS 233

Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              +   AKDLI QLL ++P  RL      S++  HPF  
Sbjct: 234 F--LSIEAKDLIHQLLRRNPADRL----SLSSVLDHPFMS 267

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.1 bits (100), Expect = 6e-05
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           GI++RDL   N+L+  + +I + DF L+
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLA 159

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 99.7 bits (248), Expect = 1e-24
 Identities = 28/227 (12%), Positives = 53/227 (23%), Gaps = 77/227 (33%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G+V+  L+P ++++   G + LT F+  ++                              
Sbjct: 226 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVV------------------------ 261

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                S +      P +   R      +               D                
Sbjct: 262 -----SSVSRGFEPPELEARRATISYHRDRRTLMTFS-----FDA--------------- 296

Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
                        W LG+ ++ ++    P            I      F     +P   +
Sbjct: 297 -------------WALGLVIYWIWCADLPITKDAALGGSEWI------FRSCKNIPQPVR 337

Query: 183 DLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
            L+   L    E RL            P ++      LR      +P
Sbjct: 338 ALLEGFLRYPKEDRL----LPLQAMETPEYEQ-----LRTELSAALP 375

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 13/118 (11%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I       PK
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 236

Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
              +   A  LI ++L  DP  R       + + +  FF            P  +P  
Sbjct: 237 H--INPVAASLIQKMLQTDPTARP----TINELLNDEFFT-------SGYIPARLPIT 281

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            +++RDLK  N+ +  D  + + DF L+
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 92.4 bits (230), Expect = 3e-22
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 114 GTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK 173
           GT  Y+APE++S +GH   VD W++G  ++ L  G  PF     + T   I       PK
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 262

Query: 174 EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
              +   A  LI ++L  DP  R       + + +  FF    +   R        PP
Sbjct: 263 H--INPVAASLIQKMLQTDPTARP----TINELLNDEFFT-SGYIPARLPITCLTIPP 313

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            +++RDLK  N+ +  D  + + DF L+
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 91.9 bits (229), Expect = 4e-22
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
             GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI + + +F
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF 237

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
            +E        AKD I +LL K+  +RL           HP+   
Sbjct: 238 DEEFFSHTSELAKDFIRKLLVKETRKRL----TIQEALRHPWITP 278

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 2   LGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS 36
             I + DLKPEN+++        HI L DF L+ + +D 
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 90.7 bits (226), Expect = 6e-22
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
             GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TL NI A   +F
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
            +E        AKD I +LL KDP+RR+      +    H + + 
Sbjct: 231 DEEYFSNTSELAKDFIRRLLVKDPKRRM----TIAQSLEHSWIKA 271

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 2   LGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS 36
             I + DLKPEN+++      +  I L DF ++ K +  
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 91.6 bits (228), Expect = 8e-22
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
             GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLANI A + +F
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF 237

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
            +E        AKD I +LL K+  +RL           HP+   
Sbjct: 238 DEEFFSQTSELAKDFIRKLLVKETRKRL----TIQEALRHPWITP 278

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 4/39 (10%)

Query: 2   LGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS 36
             I + DLKPEN+++        HI L DF L+ + +D 
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 92.4 bits (229), Expect = 8e-22
 Identities = 23/152 (15%), Positives = 37/152 (24%), Gaps = 18/152 (11%)

Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHG-----SPVDWWTLGIFLFELFYGVTPFRGVDH 157
                         E  A  ++    H         D WTLG+ ++ ++    P      
Sbjct: 263 ASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322

Query: 158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
                 I      F     +P   + L+   L    E RL            P ++ +  
Sbjct: 323 LGGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRL----LPLQAMETPEYEQLRT 372

Query: 218 ALLRCT---TPPFVPPPFNRELVSDESCPETP 246
            L            P        S  S P+  
Sbjct: 373 ELSAALPLYQTDGEPTREGGAPPSGTSQPDEA 404

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 10/35 (28%), Positives = 21/35 (60%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSA 37
           G+V+  L+P ++++   G + LT F+  ++   SA
Sbjct: 231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA 265

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 91.2 bits (227), Expect = 8e-22
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
             GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A   EF
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
             E      A AKD I +LL KDP++R+           HP+ + 
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRM----TIQDSLQHPWIKP 277

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 2   LGIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS 36
           L I + DLKPEN+++         I + DF L+ K D  
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 91.6 bits (227), Expect = 1e-21
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 13/119 (10%)

Query: 104 PVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVD----- 156
            V  R  +      Y   E ++         ++ W LG+ ++ ++    PF  V      
Sbjct: 243 KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG 302

Query: 157 --HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
                +L      +L F     +P   K LI + L  D  RRL            P F 
Sbjct: 303 SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL----LPLEAMETPEFL 357

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 53.1 bits (127), Expect = 2e-08
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
           G+V+    P+N+ +  DG +ML D     K      
Sbjct: 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP 249

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 40/199 (20%), Positives = 66/199 (33%), Gaps = 64/199 (32%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G  +RDLKP N+L+  +G  +L         D                            
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVL--------MD---------------------------- 177

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
              S +           +C   +  R+  T Q                +   T  Y APE
Sbjct: 178 -LGSMN----------QACIHVEGSRQALTLQDW-------------AAQRCTISYRAPE 213

Query: 123 IVSGEGH---GSPVDWWTLGIFLFELFYGVTPFRGVD-HELTLANIVARALEFPKEPAVP 178
           + S + H       D W+LG  L+ + +G  P+  V     ++A  V   L  P+ P   
Sbjct: 214 LFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHS 273

Query: 179 ATAKDLISQLLAKDPERRL 197
           +    L++ ++  DP +R 
Sbjct: 274 SALWQLLNSMMTVDPHQRP 292

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 88.8 bits (221), Expect = 4e-21
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           P      V   AK LI  +L  +P++R+     A      P+   
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI----TADQALKVPWICN 267

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
            GIV+R+LKPEN+L+ S      + L DF L+++ +D
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 88.8 bits (221), Expect = 4e-21
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
            +  GT  Y+APE+++ + +   VD W++G+  + L  G  PF           I     
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY 224

Query: 170 EFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           EF       +  +AKD I  LL KDP  R   T        HP+  G
Sbjct: 225 EFESPFWDDISESAKDFICHLLEKDPNERY--T--CEKALSHPWIDG 267

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 48.3 bits (116), Expect = 6e-07
 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 3/32 (9%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLS 30
            GIV+RDLKPEN+L  +   +  IM+TDF LS
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 90.2 bits (224), Expect = 4e-21
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
             T E+ APEIV  E  G   D W +G+  + L  G++PF G D   TL N+     EF 
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270

Query: 173 KE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           ++   +V   AKD I  LL K+P +RL           HP+ +G
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRL----TVHDALEHPWLKG 310

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 2   LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDS 36
             IV+ D+KPEN++  +     + + DF L+ K +  
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 88.5 bits (220), Expect = 7e-21
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
            +GT EYLAPEI++ +   +  D W +GI  + L    +PF G D++ T  NI    +++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA 218
            +E   +V   A D I  LL K+PE+R      A     H + Q  ++ 
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRP----TAEICLSHSWLQQWDFE 297

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+ DLKP+N+L+ S    G I + DF +S K   +
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 88.5 bits (220), Expect = 9e-21
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +  PVD W  G+ L+ L  G  PF   D     A I A A ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           P      V   AK LI  +L  +P++R+  T  A      P+   
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI--T--ADQALKVPWICN 290

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
            GIV+R+LKPEN+L+ S      + L DF L+++ +DS
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
               EY APE+   +   +  D W+LG  ++ L  G+ PF    ++  + NI+     F 
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223

Query: 173 KEP--AVPATAKDLISQLLAKDPERRL 197
           +E    +   A D + +LL K+ + R+
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKSRM 250

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 7/36 (19%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 2   LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDD 35
             I + D++PEN++ ++     I + +F  + +   
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 88.3 bits (219), Expect = 1e-20
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 112 FVGTHEYLAPEIVSGEGH--GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
             GT  ++APE+++      G   D W+ G+ L  L  G  PF GV+   T++ ++ + L
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL 293

Query: 170 EFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            F       +   A+DL+S LL ++ + R      A     HP+  
Sbjct: 294 CFENPNYNVLSPLARDLLSNLLNRNVDERF----DAMRALQHPWIS 335

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 2   LGIVYRDLKPENVLVRSDG--HIMLTDFDLS 30
            GI +RD+KPEN L  ++    I L DF LS
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 87.4 bits (217), Expect = 2e-20
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 16/115 (13%)

Query: 111 SFVGTHEYLAPEIVSGEG-----------HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +                    D W+LG  L+ + YG TPF+ + +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246

Query: 160 -TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             L  I+    E           +D++   L +DP++R+        +  HP+ Q
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
           GIV+ DLKP N L+  DG + L DF ++ +     ++
Sbjct: 147 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 182

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           F GT  YL+PE++  + +G PVD W  G+ L+ L  G  PF   D       I A A +F
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           P      V   AKDLI+++L  +P +R+  T  A+    HP+   
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRI--T--AAEALKHPWISH 273

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 48.5 bits (116), Expect = 7e-07
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
           +G+V+R+LKPEN+L+ S      + L DF L+++ + 
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 87.8 bits (218), Expect = 2e-20
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
            GT E+LAPE+V+ +    P D W++G+  + L  G++PF G +   TL NI+A   +  
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308

Query: 173 KE--PAVPATAKDLISQLLAKDPERRL 197
            E    +   AK+ IS+LL K+   R+
Sbjct: 309 DEEFQDISEEAKEFISKLLIKEKSWRI 335

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 2   LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDS 36
           + I++ DLKPEN+L  +     I + DF L+ +    
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 87.4 bits (217), Expect = 3e-20
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
            VGT  ++APE+V  E +G PVD W  G+ LF L  G  PF G    L    I+    + 
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-FEGIIKGKYKM 251

Query: 172 PKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
                  +  +AKDL+ ++L  DP  R+  T       +HP+ + 
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERI--T--VYEALNHPWLKE 292

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
             I++RD+KP  VL+ S      + L  F ++++  +
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 87.1 bits (216), Expect = 3e-20
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 16/115 (13%)

Query: 111 SFVGTHEYLAPEIVSGEG-----------HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VGT  Y+ PE +                    D W+LG  L+ + YG TPF+ + +++
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227

Query: 160 -TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             L  I+    E           +D++   L +DP++R+        +  HP+ Q
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 278

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
           GIV+ DLKP N L+  DG + L DF ++ +     ++
Sbjct: 128 GIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 163

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 9/110 (8%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG--VDHELTLANIVARA 168
           +  GT  Y APEI+ G  +G  VD W++GI  + L  G  PF     D  +    I+   
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM-FRRILNCE 267

Query: 169 LEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
             F       V   AKDL+ +L+  DP++RL  T        HP+  G  
Sbjct: 268 YYFISPWWDEVSLNAKDLVRKLIVLDPKKRL--T--TFQALQHPWVTGKA 313

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
            GIV+RDLKPEN+L  +   D  + + DF LS   +  
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 86.1 bits (213), Expect = 6e-20
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL--TLANIVARA 168
             VGT  Y++PE + G  +   VD ++LG+ LFEL Y  +       E    + ++  R 
Sbjct: 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ----MERVRIITDV--RN 288

Query: 169 LEFPKEPAV-PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
           L+FP            ++  +L+  P  R      A+ I  +  F+ +
Sbjct: 289 LKFPLLFTQKYPQEHMMVQDMLSPSPTERP----EATDIIENAIFENL 332

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.6 bits (100), Expect = 6e-05
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNP 48
           G+++RDLKP N+    D  + + DF L    D       +++    
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 86.4 bits (214), Expect = 9e-20
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 111 SFVGTHEYLAPEIVSGEG-----------HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
           S VG   Y+ PE +                    D W+LG  L+ + YG TPF+ + +++
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274

Query: 160 -TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             L  I+    E           +D++   L +DP++R+        +  HP+ Q
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT---LANIVA 166
           M+   T  ++APE++  +G+ +  D W+LG+ L+ +  G TPF     +     LA I +
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237

Query: 167 RALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
                      +V  TAKDL+S++L  DP +RL     A+ +  HP+   
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWIVH 283

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 4/33 (12%)

Query: 2   LGIVYRDLKPENVLVRSDGH----IMLTDFDLS 30
            G+V+RDLKP N+L   +      I + DF  +
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 86.8 bits (215), Expect = 1e-19
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
            GT E+ APE+  G+  G   D W++G+  + L  G++PF G + + TL N+ +      
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376

Query: 173 KE--PAVPATAKDLISQLLAKDPERRL 197
                 +    KD I +LL  DP  R+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRM 403

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 2   LGIVYRDLKPENVLV--RSDGHIMLTDFDLSLKCDD 35
              V+ DLKPEN++   +    + L DF L+   D 
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 84.7 bits (210), Expect = 1e-19
 Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
            P   R    VGT  Y++PE + G  +   VD ++LG+ LFEL Y   PF      +   
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTL 237

Query: 163 NIVARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
             V R L+FP            ++  +L+  P  R      A  I  +  F+ ++
Sbjct: 238 TDV-RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERP----EAINIIENAVFEDLD 287

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPP 49
           G+++RDLKP N+    D  + + DF L    D       +++     
Sbjct: 138 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 16/124 (12%)

Query: 112 FVGTHEYLAPEIVSG------EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
             GT  YLAPEI+         G+G  VD W+ G+ ++ L  G  PF      L L  I+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242

Query: 166 ARALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCT 223
           +   +F          T KDL+S+ L   P++R   T  A     HPFFQ          
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY--T--AEEALAHPFFQQYVVE----E 294

Query: 224 TPPF 227
              F
Sbjct: 295 VRHF 298

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 19/34 (55%), Positives = 24/34 (70%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
           L IV+RDLKPEN+L+  D +I LTDF  S + D 
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 13/114 (11%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-------LA 162
            +   T  Y APE+++  G+    D W+LG+ L+ +  G  PF+  D  LT       + 
Sbjct: 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK 226

Query: 163 NIVARALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
            I      F  E    V   AKDLI  LL  DP +RL      S ++++ + Q 
Sbjct: 227 KIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL--K--MSGLRYNEWLQD 276

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLS 30
           +G+V+RDLKPEN+L      +  I + DF  +
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 83.9 bits (208), Expect = 2e-19
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)

Query: 112 FVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
            VGT  ++APE +S       G  +D W +G+ L+   +G  PF         + I ++A
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA 256

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           LEFP +P +    KDLI+++L K+PE R+        IK HP+  
Sbjct: 257 LEFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPWVT 297

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 83.5 bits (207), Expect = 4e-19
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVT-PFRGVDHELTLANIVARAL 169
              G   Y+APE++ G  +G+  D ++LG+ + E+   +  P  G   +      +    
Sbjct: 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL--PP 271

Query: 170 EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           EF     + +  + ++  +L  DP+ R      A A+   P  +
Sbjct: 272 EFT--AGLSSELRSVLVMMLEPDPKLRA----TAEALLALPVLR 309

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           G+V+ D+KP N+ +   G   L DF L 
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLL 204

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +      
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
           F       V  +AKDLI ++L   P  R+     A     H + Q   
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTYVPSMRI----SARDALDHEWIQTYT 289

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+RDLKPEN+L+ S   D +I + DF LS   + S
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 83.5 bits (207), Expect = 5e-19
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR-- 167
            +   T  Y+APE++  E +    D W+LG+ ++ L  G  PF     +     +  R  
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246

Query: 168 --ALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
                FP      V   AK LI  LL  DP  RL      +   +HP+   
Sbjct: 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL----TITQFMNHPWINQ 293

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
             I +RD+KPEN+L  S   D  + LTDF  + +   
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 84.4 bits (209), Expect = 7e-19
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             +GT  Y+APE++  + +    D W++G+ LF L  G  PF G   +  L  +      
Sbjct: 197 ERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           F       V   AKDLI Q+L  D +RR+     A     HP+ + 
Sbjct: 256 FDSPEWKNVSEGAKDLIKQMLQFDSQRRI----SAQQALEHPWIKE 297

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+RDLKPEN+L+ S   D  I + DF LS   ++ 
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 82.3 bits (204), Expect = 7e-19
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +  GT  Y+APE+   +      D W+ G+ ++ L  G  PF G   E        +   
Sbjct: 185 NAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243

Query: 171 FPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  E   +   A DL+ Q+L KDPERR      A+ + HH +F+
Sbjct: 244 YAVECRPLTPQAVDLLKQMLTKDPERRP----SAAQVLHHEWFK 283

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             +V++DLKPEN+L +       I + DF L+      
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 84.1 bits (208), Expect = 8e-19
 Identities = 50/229 (21%), Positives = 82/229 (35%), Gaps = 73/229 (31%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI-ISDQNPPIAVLQNEYLVD 60
           L I++RDLKP+N+LV +           +      A N +I ISD               
Sbjct: 134 LKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISD--------------- 171

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
              F                       +K  +GQ S              +  GT  + A
Sbjct: 172 ---FGLC--------------------KKLDSGQSS--------FRTNLNNPSGTSGWRA 200

Query: 121 PEIVSGEGH-------GSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANIVA-----R 167
           PE++    +          +D +++G +F + L  G  PF   D     +NI+       
Sbjct: 201 PELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRESNIIRGIFSLD 258

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
            ++   + ++ A A DLISQ++  DP +R      A  +  HP F   +
Sbjct: 259 EMKCLHDRSLIAEATDLISQMIDHDPLKRP----TAMKVLRHPLFWPKS 303

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 82.8 bits (205), Expect = 1e-18
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 10/139 (7%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + +GT  YL+PEI   + + +  D W LG  L+EL      F     +  +  I++    
Sbjct: 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG--S 241

Query: 171 FPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVP 229
           FP          + L+SQL  ++P  R       ++I    F       + +  +P  + 
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRP----SVNSILEKGFIAK---RIEKFLSPQLIA 294

Query: 230 PPFNRELVSDESCPETPVE 248
             F  +  S       P +
Sbjct: 295 EEFCLKTFSKFGSQPIPAK 313

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 11/39 (28%), Positives = 23/39 (58%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
            I++RD+K +N+ +  DG + L DF ++   + +   A+
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 82.8 bits (205), Expect = 2e-18
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +      
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
           F       +   AKDLI ++L   P  R+     A+    HP+ Q  +
Sbjct: 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQKYS 284

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+RDLKPEN+L+ S   D  I + DF LS     +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 80.8 bits (200), Expect = 2e-18
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D +     GT  Y++PE +S + +G  VD + LG+ L EL +          E   +   
Sbjct: 175 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA----FE--TSKFF 228

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               +           K L+ +LL+K PE R       S I       
Sbjct: 229 TDLRDGIISDIFDKKEKTLLQKLLSKKPEDRP----NTSEILRTLTVW 272

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS--LKCDDSAS 38
            ++ RDLKP N+ +     + + DF L   LK D   +
Sbjct: 142 KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 179

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 80.7 bits (200), Expect = 3e-18
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + VGT  Y++P+++ G  +G   D W+ G+ ++ L  G  PF        +  I      
Sbjct: 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT 225

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           FP++    V   A+ LI +LL K P++R+     +     H +F+ 
Sbjct: 226 FPEKDWLNVSPQAESLIRRLLTKSPKQRI----TSLQALEHEWFEK 267

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
           L + +RDLKPEN L  +   D  + L DF L+ +    
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 82.4 bits (204), Expect = 3e-18
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             +GT  Y+APE++  + +    D W+ G+ ++ L  G  PF G + +  +  +      
Sbjct: 207 DRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           F       +   AK+LI  +L  D  +R      A    +  + + 
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRC----TAEEALNSRWIKK 307

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+RD+KPEN+L+ +     +I + DF LS      
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 56/236 (23%), Positives = 79/236 (33%), Gaps = 87/236 (36%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQI-ISDQNPPIAVLQNEYLVD 60
            GI +RDLKPEN+L                 C+     + + I D               
Sbjct: 130 KGIAHRDLKPENIL-----------------CEHPNQVSPVKICD--------------- 157

Query: 61  HPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLA 120
              F   S I  N          P    +  T                     G+ EY+A
Sbjct: 158 ---FDLGSGIKLN------GDCSPISTPELLT-------------------PCGSAEYMA 189

Query: 121 PEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT--------------- 160
           PE+V         +    D W+LG+ L+ L  G  PF G                     
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249

Query: 161 LANIVARALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
             +I     EFP +    +   AKDLIS+LL +D ++RL     A+ +  HP+ QG
Sbjct: 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 10/109 (9%)

Query: 112 FVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN-IVAR 167
             GT  YLAPE++      G+   VD W+LG+ LF    G  PF     +++L + I + 
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360

Query: 168 ALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
              F  E    V   A DL+ +LL  DP+ R            HP+ Q 
Sbjct: 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQD 405

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
            GI++RDLKPENVL+ S   D  I +TDF  S    ++
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 10/111 (9%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR-- 167
            +   T  Y+APE++  E +    D W+LG+ ++ L  G  PF           +  R  
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280

Query: 168 --ALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
               EFP      V    K LI  LL  +P +R+  T   +   +HP+   
Sbjct: 281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM--T--ITEFMNHPWIMQ 327

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
           + I +RD+KPEN+L  S   +  + LTDF  + +   
Sbjct: 180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 112 FVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
             GT  YLAPE++      G+   VD W+LG+ LF    G  PF     +++L + +   
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235

Query: 169 -LEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
              F  E    V   A DL+ +LL  DP+ R            HP+ Q 
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQD 280

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDD 35
            GI++RDLKPENVL+ S   D  I +TDF  S    +
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 79.0 bits (195), Expect = 3e-17
 Identities = 43/110 (39%), Positives = 51/110 (46%), Gaps = 12/110 (10%)

Query: 112 FVGTHEYLAPEIVSG------EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
             GT  YLAPEI+         G+G  VD W  G+ LF L  G  PF      L L  I+
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318

Query: 166 ARALEFPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               +F         +T KDLIS+LL  DPE RL  T  A     HPFF+
Sbjct: 319 EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARL--T--AEQALQHPFFE 364

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 51.3 bits (123), Expect = 8e-08
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD 35
             IV+RDLKPEN+L+  +  I L+DF  S   + 
Sbjct: 219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 78.0 bits (193), Expect = 3e-17
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             +GT  Y+APE++ G  +    D W+ G+ L+ L  G  PF G +    L  +      
Sbjct: 182 DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 171 FPKEP--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           F       +   AKDLI ++L   P  R+     A+    HP+ Q 
Sbjct: 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQK 282

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDS 36
             IV+RDLKPEN+L+ S   D  I + DF LS     +
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 78.6 bits (194), Expect = 3e-17
 Identities = 46/244 (18%), Positives = 65/244 (26%), Gaps = 69/244 (28%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPP 63
           I++RDLK EN+L+ + G I L        CD                             
Sbjct: 159 IIHRDLKVENLLLSNQGTIKL--------CD----------------------------- 181

Query: 64  FTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEI 123
           F SA                        +        V E      ++   T  Y  PEI
Sbjct: 182 FGSA---------------TTISHYPDYSWSAQRRALVEE-----EITRNTTPMYRTPEI 221

Query: 124 V---SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPAT 180
           +   S    G   D W LG  L+ L +   PF   +    L  IV      P        
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQHPF---EDGAKLR-IVNGKYSIPPHDTQYTV 277

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPF-FQGVNWALLRCTTPPFVPPPFNRELVSD 239
              LI  +L  +PE RL      + + H             +      +         + 
Sbjct: 278 FHSLIRAMLQVNPEERL----SIAEVVHQLQEIAAARNVNPKSPITELLEQNGGYGSATL 333

Query: 240 ESCP 243
              P
Sbjct: 334 SRGP 337

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 77.0 bits (190), Expect = 9e-17
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 16/128 (12%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           F GT  Y  PE +S    H  P   W+LGI L+++  G  PF           I+   L 
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH 251

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ-GVNWALLRCTTPPFVP 229
           FP    V      LI + LA  P  R    +    I   P+ Q       L  +     P
Sbjct: 252 FP--AHVSPDCCALIRRCLAPKPSSRPSLEE----ILLDPWMQTPAEDVPLNPSKGG--P 303

Query: 230 PPFNRELV 237
            P    L+
Sbjct: 304 APLAWSLL 311

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 3   GIVYRDLKPENVLVRSD-GHIMLTDFDLS 30
           G+V+RD+K EN+L+    G   L DF   
Sbjct: 159 GVVHRDIKDENILIDLRRGCAKLIDFGSG 187

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 33/131 (25%), Positives = 47/131 (35%), Gaps = 20/131 (15%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           F GT  Y  PE +     HG     W+LGI L+++  G  PF   +       I+   + 
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 261

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
           F     V +  + LI   LA  P  R    +    I++HP+ Q V         P     
Sbjct: 262 FR--QRVSSECQHLIRWCLALRPSDRPTFEE----IQNHPWMQDVL-------LPQETAE 308

Query: 231 PFNRELVSDES 241
                L    S
Sbjct: 309 IHLHSLSPGPS 319

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 3   GIVYRDLKPENVLV-RSDGHIMLTDFDLS 30
           G+++RD+K EN+L+  + G + L DF   
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSG 197

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 114 GTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEF 171
           G+  +  PEI +G     G  VD W+ G+ L+ +  G+ PF G +      NI   +   
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232

Query: 172 PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP 231
           P +        DL+  +L  +P +R         I+ H +F+           P  +PP 
Sbjct: 233 PGD--CGPPLSDLLKGMLEYEPAKRF----SIRQIRQHSWFRK---KHPPAEAPVPIPPS 283

Query: 232 FNRELVSDESCPETPVEY 249
            + +   D     T V Y
Sbjct: 284 PDTK---DRWRSMTVVPY 298

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 9/28 (32%), Positives = 20/28 (71%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           GIV++D+KP N+L+ + G + ++   ++
Sbjct: 129 GIVHKDIKPGNLLLTTGGTLKISALGVA 156

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 75.0 bits (185), Expect = 3e-16
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +FVGT  Y++PE ++   +    D W+LG  L+EL   + PF     +     I     +
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--K 232

Query: 171 FPKEPAV-PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           F + P        ++I+++L      R         I  +P   
Sbjct: 233 FRRIPYRYSDELNEIITRMLNLKDYHRP----SVEEILENPLIL 272

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
           +++RDLKP NV +    ++ L DF L+   +   S A+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 74.9 bits (185), Expect = 3e-16
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 111 SFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-TLANIVARA 168
              GT  Y+APE++     H  PVD W+ GI L  +  G  P+          ++   + 
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
                   + +    L+ ++L ++P  R+        IK   ++ 
Sbjct: 226 TYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 266

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 12/29 (41%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           +GI +RD+KPEN+L+    ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 13/130 (10%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           F G   Y APE+  G+   G  VD W+LG+ L+ L  G  PF G + +     ++     
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPP 230
            P    +    ++L+ + L  +P +R    +    I    +                 P 
Sbjct: 233 IP--FYMSTDCENLLKRFLVLNPIKRGTLEQ----IMKDRWINA------GHEEDELKPF 280

Query: 231 PFNRELVSDE 240
                 +SD+
Sbjct: 281 VEPELDISDQ 290

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 74.7 bits (184), Expect = 8e-16
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 111 SFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-TLANIVARA 168
              GT  Y+APE++     H  PVD W+ GI L  +  G  P+          ++   + 
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
                   + +    L+ ++L ++P  R+        IK   ++ 
Sbjct: 226 TYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 266

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 22/29 (75%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           +GI +RD+KPEN+L+    ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 108 RSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLAN 163
           R     GT  ++APE++S    E     VD ++ G   + +   G  PF           
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241

Query: 164 IVARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           + A +L+    E      A++LI +++A DP++R      A  +  HPFF  
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP----SAKHVLKHPFFWS 289

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 2   LGIVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSAS 38
           L IV+RDLKP N+L+           M++DF L  K      
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 21/136 (15%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           F GT EY APE++ G    G  ++ W+LG+ L+ L +   PF  ++        V  A+ 
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE------ETVEAAIH 242

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF-QGVNWALLRCTTPPFVP 229
            P    V      L+S LL   PERR    K    +   P+  Q VN          +  
Sbjct: 243 PPYL--VSKELMSLVSGLLQPVPERRTTLEK----LVTDPWVTQPVN-------LADYTW 289

Query: 230 PPFNRELVSDESCPET 245
               R    +      
Sbjct: 290 EEVFRVNKPESGVLSA 305

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.1 bits (107), Expect = 8e-06
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
             I++RD+K EN+++  D  I L DF  +
Sbjct: 149 KDIIHRDIKDENIVIAEDFTIKLIDFGSA 177

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 111 SFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           S VGT  Y+APE++  +   G   D W+ G+ L+ +  G  PF   +        + R L
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235

Query: 170 ----EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
                 P +  +      LIS++   DP  R+        IK H +F 
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIKTHSWFL 279

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 114 GTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           G+  Y APE++SG    G  VD W+ G+ L+ L  G  PF           I       P
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231

Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +   +  +   L+  +L  DP +R         I+ H +F+
Sbjct: 232 EY--LNRSVATLLMHMLQVDPLKRA----TIKDIREHEWFK 266

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            +V+RDLKPENVL+ +  +  + DF LS
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLS 158

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR----ALEFPKE 174
            A E  +GE +    D W+LG+ ++ L  G  PF           +  R      EFP  
Sbjct: 166 FAKE-TTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224

Query: 175 P--AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
               V    K LI  LL  +P +R+  T   +   +HP+   
Sbjct: 225 EWSEVSEEVKMLIRNLLKTEPTQRM--T--ITEFMNHPWIMQ 262

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 2   LGIVYRDLKPENVLVRS---DGHIMLTDFDL 29
           + I +RD+KPEN+L  S   +  + LTDF  
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGF 166

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 114 GTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           G+  Y APE+++G+   G  VD W+ GI L+ +  G  PF           + +     P
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP 228

Query: 173 KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
               +   A+ LI +++  DP +R+   +    I+  P+F 
Sbjct: 229 DF--LSPGAQSLIRRMIVADPMQRITIQE----IRRDPWFN 263

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 69.0 bits (169), Expect = 9e-14
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 7/103 (6%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
             G+  Y APE++SG    G  VD W+ G+ L+ L  G  PF           I      
Sbjct: 175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFY 234

Query: 171 FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            P+   +  +   L+  +L  DP +R         I+ H +F+
Sbjct: 235 TPQY--LNPSVISLLKHMLQVDPMKRATIKD----IREHEWFK 271

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            +V+RDLKPENVL+ +  +  + DF LS
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLS 163

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-TLANIVARAL 169
           S VGT  Y++PE +   G+    D W+LG  L+E+    +PF G    L +L   + +  
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC- 253

Query: 170 EFPKEPA--VPATAKDLISQLLAKDPERR 196
           ++P  P+       + L++  +  DPE+R
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKR 282

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 11/39 (28%), Positives = 19/39 (48%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
            +++RD+KP NV + + G + L D  L        + A 
Sbjct: 156 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 68.6 bits (167), Expect = 2e-13
 Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 26/128 (20%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR--- 167
            FVGT +YLAPE++  + +   VD+W+ G   FE   G  PF      +     V     
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 241

Query: 168 -----------ALEFPKEPAVP--------ATAKDLISQLLAKDPERRLGSTKGASAIKH 208
                      A++F      P           +  +  +L     +R           +
Sbjct: 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRG----TDPQNPN 297

Query: 209 HPFFQGVN 216
              FQ ++
Sbjct: 298 VGCFQALD 305

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 3   GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDD 35
            I++RDLKPEN++++         + D   + + D 
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 9/107 (8%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
                 GT  ++APE+V G+   + VD W+    +  +  G  P+           I + 
Sbjct: 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE 271

Query: 168 ALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIK--HHPF 211
                + P          I + L K+P  R      ASA++      
Sbjct: 272 PPPIREIPPSCAPLTAQAIQEGLRKEPVHR------ASAMELRRKVG 312

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 39/139 (28%)

Query: 110 MSFVGTHEYLAPEIVSG--------EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           +S  GT EYL P++           + +G+ VD W++G+  +    G  PFR  +     
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232

Query: 162 ANIVAR-----------------------ALEFPKEPAVPATAKD----LISQLLAKDPE 194
             ++ +                       + + P   ++    +     +++ +L  D E
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292

Query: 195 RRLGSTKGASAIKHHPFFQ 213
           +      G           
Sbjct: 293 KCW----GFDQFFAETSDI 307

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 11/111 (9%)

Query: 108 RSMSFVGTHEYLAPEIV--SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
            + +F GT +Y+APEI+     G+G   D W+LG  + E+  G  PF  +         V
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238

Query: 166 ARALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
                 P+ P  + A AK  I +    DP++R      A A       F +
Sbjct: 239 GMFKVHPEIPESMSAEAKAFILKCFEPDPDKR------ACANDLLVDEFLK 283

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 62.7 bits (153), Expect = 8e-12
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + +GT E++APE+   E +   VD +  G+ + E+     P+    +   +   V   ++
Sbjct: 189 AVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK 247

Query: 171 FPKEPAVP-ATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
                 V     K++I   + ++ + R       S     +H FFQ
Sbjct: 248 PASFDKVAIPEVKEIIEGCIRQNKDER------YSIKDLLNHAFFQ 287

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 35/124 (28%)

Query: 110 MSFVGTHEYLAPEIVSG--------EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           +S  GT EYL P++           + +G+ VD W++G+  +    G  PFR  +     
Sbjct: 173 VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232

Query: 162 ANIVARAL-----------------------EFPKEPAVPATAKD----LISQLLAKDPE 194
             ++ + +                       + P   ++    +     +++ +L  D E
Sbjct: 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQE 292

Query: 195 RRLG 198
           +  G
Sbjct: 293 KCWG 296

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 45.2 bits (107), Expect = 9e-06
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 3   GIVYRDLKPENVLVRS----DGHIMLTDFDLSLKCDDS 36
           GIV+R++KP N++            LTDF  + + +D 
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 62.2 bits (151), Expect = 2e-11
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 29/179 (16%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
             I++ D+KPEN+L+  +   +      + +   S +     S  +   A   N  +   
Sbjct: 166 CRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPL 225

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
            P  +    +        +C+  K          +                + T +Y + 
Sbjct: 226 EPKNAEKLKVKIA-DLGNACWVHK--------HFTED--------------IQTRQYRSL 262

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG------VDHELTLANIVARALEFPKE 174
           E++ G G+ +P D W+     FEL  G   F           E  +A I+    + P++
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 321

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 47/222 (21%), Positives = 74/222 (33%), Gaps = 81/222 (36%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G ++RD+K  N+L+  DG + + DF +S         A + +  +               
Sbjct: 141 GQIHRDVKAGNILLGEDGSVQIADFGVS---------AFLATGGDIT------------- 178

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                  R + +KT                   FVGT  ++APE
Sbjct: 179 -----------------------RNKVRKT-------------------FVGTPCWMAPE 196

Query: 123 IVS-GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA---LEFPKEPAVP 178
           ++    G+    D W+ GI   EL  G  P+        L   +      LE   +    
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM 256

Query: 179 ATA-----KDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
                   + +IS  L KDPE+R       +A +   H FFQ
Sbjct: 257 LKKYGKSFRKMISLCLQKDPEKR------PTAAELLRHKFFQ 292

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 61.5 bits (149), Expect = 3e-11
 Identities = 15/122 (12%), Positives = 38/122 (31%), Gaps = 14/122 (11%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDHELT 160
           + P      +   T  +   E++S +     +D++ +   ++ + +G     +    E  
Sbjct: 235 LFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294

Query: 161 LANIVARALEFP-----------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH 209
              +  R                        + DL+ Q L K  ++    T    A+++ 
Sbjct: 295 PEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY--TNKIRALRNR 352

Query: 210 PF 211
             
Sbjct: 353 LI 354

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 11/40 (27%)

Query: 2   LGIVYRDLKPENVLVRS-----------DGHIMLTDFDLS 30
             I++ D+KP+N ++ +              + L D   S
Sbjct: 191 CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQS 230

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 11/106 (10%)

Query: 110 MSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
               G   +LA E++     H    D + L + +          R  D       I  R 
Sbjct: 188 QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHEI--RQ 242

Query: 169 LEFPKEPAV-PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              P+ P V      +L+  ++  DPERR      A A+  H    
Sbjct: 243 GRLPRIPQVLSQEFTELLKVMIHPDPERR----PSAMALVKHSVLL 284

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 12/115 (10%)

Query: 107 VRSM---SFVGTHEYLAPEIVSGEGHGSP----VDWWTLGIFLFELFYGVTPFRGVDHEL 159
           V  +      G   Y+APE ++ E +        D W+LGI + EL     P+       
Sbjct: 161 VDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 220

Query: 160 -TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             L  +V             A   D  SQ L K+ + R         +  HPFF 
Sbjct: 221 QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKER----PTYPELMQHPFFT 271

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + VGT  Y+APE  S        D + L   L+E   G  P++G D    L+ + A   +
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG-D---QLSVMGAHINQ 249

Query: 171 FP-----KEPAVPATAKDLISQLLAKDPERRLGS 199
                    P +P     +I++ +AK+PE R  +
Sbjct: 250 AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT 283

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 13/25 (52%), Positives = 17/25 (68%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           G  +RD+KPEN+LV +D    L DF
Sbjct: 154 GATHRDVKPENILVSADDFAYLVDF 178

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 58.7 bits (142), Expect = 4e-10
 Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 19/100 (19%)

Query: 107 VRSM----SFVGTHEYLAPEIVSGEGHGSPV---DWWTLGIFLFELFYGVTPFRGVDHEL 159
           V  +       GT  + APEIV       P    D +T+G  L  L   +    G     
Sbjct: 228 VSRINSFGYLYGTPGFQAPEIVRTG----PTVATDIYTVGRTLAALTLDLPTRNGRY--- 280

Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS 199
                V    E         +   L+ + +  DP +R  +
Sbjct: 281 -----VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTT 315

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 1/25 (4%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           G+VY DLKPEN+++  +  + L D 
Sbjct: 202 GLVYNDLKPENIMLTEEQ-LKLIDL 225

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 107 VRSMS---FVGTHEYLAPEIV-----SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE 158
           V   +     G   Y+APE +     +   +    D W+LGI L EL  G  P++    +
Sbjct: 176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235

Query: 159 LTLANIVAR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             +   V +      P         +  +   L KD  +R       + +  H F +
Sbjct: 236 FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKR----PKYNKLLEHSFIK 288

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA- 168
            +  G+  ++APE+  G  +    D ++ GI L+E+     PF  +              
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG 220

Query: 169 --LEFPKEPAVPATAKDLISQLLAKDPERR 196
                 K   +P   + L+++  +KDP +R
Sbjct: 221 TRPPLIKN--LPKPIESLMTRCWSKDPSQR 248

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL- 169
             +GT +Y +PE   GE      D +++GI L+E+  G  PF G          V+ A+ 
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG-------ETAVSIAIK 223

Query: 170 ----EFPK-----EPAVPATAKDLISQLLAKDPERR 196
                 P         +P +  ++I +   KD   R
Sbjct: 224 HIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 11/25 (44%), Positives = 19/25 (76%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
            IV+RD+KP+N+L+ S+  + + DF
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDF 155

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 56/195 (28%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
            I++RDL   N LVR + ++++ DF L                                 
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGL--------------------------------- 154

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                + ++ +           K+  +KK                   + VG   ++APE
Sbjct: 155 -----ARLMVDEKTQPEGLRSLKKPDRKK-----------------RYTVVGNPYWMAPE 192

Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-HELTLANIVARALEFPKEPAVPATA 181
           +++G  +   VD ++ GI L E+   V          +     V   L+    P  P + 
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSF 252

Query: 182 KDLISQLLAKDPERR 196
             +  +    DPE+R
Sbjct: 253 FPITVRCCDLDPEKR 267

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI-VARAL 169
           + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G D  +++A   V    
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVREDP 236

Query: 170 EFPKE--PAVPATAKDLISQLLAKDPERR 196
             P      + A    ++ + LAK+PE R
Sbjct: 237 IPPSARHEGLSADLDAVVLKALAKNPENR 265

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 9/25 (36%), Positives = 18/25 (72%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           GI++RD+KP N+++ +   + + DF
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDF 160

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 25/88 (28%), Positives = 36/88 (40%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
            MS  G + ++APE++         D W+ G+ L+EL  G  PFRG+D       +    
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERR 196
           L  P     P     L+      DP  R
Sbjct: 231 LALPIPSTCPEPFAKLMEDCWNPDPHSR 258

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHG---SPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           +     G+  ++APE++  +         D +  GI L+EL  G  P+  +++   +  +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237

Query: 165 VARALEFPKEPAVPATA----KDLISQLLAKDPERR 196
           V R    P    V +      K L+++ L K  + R
Sbjct: 238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            I++RDLK  N+ +  D  + + DF L+
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 27/115 (23%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           + +GT  ++APE++   G+    D W+LGI   E+  G  P+  + H +       RA+ 
Sbjct: 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI-HPM-------RAIF 235

Query: 171 F-PKEPAVP---------ATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
             P  P  P             D + Q L K PE+R      A+A +   HPF +
Sbjct: 236 MIPTNPP-PTFRKPELWSDNFTDFVKQCLVKSPEQR------ATATQLLQHPFVR 283

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 25/113 (22%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           +FVGT  ++APE++    + S  D W+LGI   EL  G  P   + H +       + L 
Sbjct: 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPM-------KVLF 229

Query: 171 F-PKEPAVP-------ATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
             PK    P          K+ +   L K+P  R       +A +   H F  
Sbjct: 230 LIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFR------PTAKELLKHKFIL 275

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 25/114 (21%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALE 170
           S VGT  ++APE++S   + + VD W+LGI + E+  G  P+      +       +A++
Sbjct: 200 SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD-SPV-------QAMK 251

Query: 171 F-PKEPA--------VPATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
                P         V    +D + ++L +DP+ R      A+A +   HPF  
Sbjct: 252 RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER------ATAQELLDHPFLL 299

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           S S  GT E++APE++  E      D ++ G+ L+EL     P+  ++    +   V   
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFK 254

Query: 169 ---LEFPKEPAVPATAKDLISQLLAKDPERR 196
              LE P+   +      +I      +P +R
Sbjct: 255 CKRLEIPRN--LNPQVAAIIEGCWTNEPWKR 283

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 25/114 (21%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL- 169
           + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+    + L       RAL 
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE-NPL-------RALY 226

Query: 170 --------EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
                   E      + A  +D +++ L  D E+R       SA +   H F +
Sbjct: 227 LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR------GSAKELLQHQFLK 274

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 17/119 (14%)

Query: 107 VRSMS---FVGTHEYLAPEIVSGEGHGSP----VDWWTLGIFLFELFYGVTPFRGVD--H 157
           V S++     G   Y+APE +             D W+LGI L+EL  G  P+   +   
Sbjct: 177 VDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF 236

Query: 158 ELTLANIVARA---LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           +  L  +V      L   +E     +  + ++  L KD  +R         +  HPF  
Sbjct: 237 DQ-LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKR----PKYKELLKHPFIL 290

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 109 SMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDH-ELTLANIV 165
               +G  +++APE +  E   +    D ++  + L+ +  G  PF    + ++   N++
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242

Query: 166 ARA---LEFPKEPAVPATAKDLISQLLAKDPERR 196
                    P++   P   +++I    + DP++R
Sbjct: 243 REEGLRPTIPED--CPPRLRNVIELCWSGDPKKR 274

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 51.4 bits (123), Expect = 7e-08
 Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 107 VRSM--SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           + SM  SFVGT  Y++PE + G  +    D W++G+ L E+  G  P    D +      
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLG 198
             +      E                 D    + 
Sbjct: 243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA 276

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
             I++RD+KP N+LV S G I L DF +S +  DS +N
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 32/151 (21%), Positives = 50/151 (33%), Gaps = 46/151 (30%)

Query: 115 THE-----YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           T       Y APE++    + +PVD W++G    E+F     FRG      L  I+   +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL-DVI 235

Query: 170 -----------------EFPKEPAVP---------ATAKDLISQLLAKDPERRLGSTKGA 203
                             F  + A P            KDL+ + L  +P +R+      
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI------ 289

Query: 204 SAIK--HHPFFQGVNWALLRCTTPPFVPPPF 232
           SA     HP+FQ +            +    
Sbjct: 290 SAYSALSHPYFQDLE------RCKENLDSHL 314

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 15/93 (16%), Positives = 24/93 (25%), Gaps = 12/93 (12%)

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFP 172
           +     +              D   +G  L+ L     P         LA         P
Sbjct: 170 LAYPATMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

Query: 173 KEP-----AVPATAKDLISQLLAKDPERRLGST 200
            EP      +P     + ++ +  D   R  ST
Sbjct: 223 IEPADIDRDIPFQISAVAARSVQGDGGIRSAST 255

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.8 bits (101), Expect = 5e-05
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDF 27
           G+      P  V V  DG ++L   
Sbjct: 149 GVALSIDHPSRVRVSIDGDVVLAYP 173

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 45/256 (17%), Positives = 75/256 (29%), Gaps = 95/256 (37%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           + + + DLKPEN+L+             +++        QI   ++  I       L+D 
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLI---TVRRVTDGKKIQIYRTKSTGI------KLID- 205

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
             F  A              F+           H               S + T +Y AP
Sbjct: 206 --FGCA-------------TFKSDY--------HG--------------SIINTRQYRAP 228

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--------------- 166
           E++   G     D W+ G  L EL+ G   FR  +H   LA + +               
Sbjct: 229 EVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK 288

Query: 167 -----------RALEFPKEPAVPATAK------------------DLISQLLAKDPERRL 197
                        L +P+  +   + K                  D +  +L  DP  R 
Sbjct: 289 TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRP 348

Query: 198 GSTKGASAIKHHPFFQ 213
                 + +  H F +
Sbjct: 349 ----SPAELLKHKFLE 360

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 29/150 (19%), Positives = 46/150 (30%), Gaps = 50/150 (33%)

Query: 111 SFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT------LANI 164
           + + T EY +PE++ G   G   D W+    +FEL  G   F   +          +A I
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253

Query: 165 VA--------------RALEF----------------PKEPAVPATAK----------DL 184
           +                   F                P E  +    K          D 
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313

Query: 185 ISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
           +S +L  DP +R     G     +HP+ + 
Sbjct: 314 LSPMLQLDPRKRA-DAGGL---VNHPWLKD 339

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 31/118 (26%)

Query: 111 SFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           SFVGT  ++APE++       +   VD W+LGI   EL     P   + + +        
Sbjct: 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAM-------S 260

Query: 168 ALEF--PKEPAVP--------ATAKDLISQLLAKDPERRLGSTKGASAIK--HHPFFQ 213
           AL +   +  + P           ++ +   L K P+ R       ++     H F  
Sbjct: 261 AL-YHIAQNES-PALQSGHWSEYFRNFVDSCLQKIPQDR------PTSEVLLKHRFVL 310

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 48.0 bits (115), Expect = 9e-07
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 36/130 (27%)

Query: 115 THE-----YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
           T       Y APE++    + +PVD W++G    E+F     F G      L  I    +
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF-DLI 235

Query: 170 -----------------EFPKEPAVP---------ATAKDLISQLLAKDPERRLGSTKGA 203
                             FP     P          +   L+ ++L  +P +R+     A
Sbjct: 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI----SA 291

Query: 204 SAIKHHPFFQ 213
                H +  
Sbjct: 292 FRALQHSYLH 301

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 31/136 (22%), Positives = 49/136 (36%), Gaps = 38/136 (27%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--- 165
           THE     Y AP+++ G     + VD W++G    E+  G   F GV  +  L  I    
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236

Query: 166 ----------------ARALEFPKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
                            +   F      P             DL+S +L  DP +R+   
Sbjct: 237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI--- 293

Query: 201 KGASAIKHHPFFQGVN 216
             A    +HP+F+ ++
Sbjct: 294 -SARDAMNHPYFKDLD 308

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 46.7 bits (112), Expect = 2e-06
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 39/136 (28%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           THE     Y AP+++ G     + +D W++G    E+  G   F GV     L  I  R 
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RI 216

Query: 169 L-------------------EFPKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
           L                    F     +P          +  DL+S++L  DP +R+   
Sbjct: 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI--- 273

Query: 201 KGASAIKHHPFFQGVN 216
             A     H +F+  N
Sbjct: 274 -TAKQALEHAYFKENN 288

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 9/96 (9%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSP---------VDWWTLGIFLFELFYGVTPFRGVDHELT 160
               G   +LAPEI+      +           D + LG   +EL     PF+    E  
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251

Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
           +  +         +  +     D++    A + E R
Sbjct: 252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEER 287

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 41/135 (30%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLG-IFLFELFYGVTPFRGVDHELTLANI--- 164
             E     Y APE++ G+   G  VD W +G +   E+F G   F G      L +I   
Sbjct: 182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV-TEMFMGEPLFPGDSDIDQLYHIMMC 240

Query: 165 ----------------VARALEFPKE----------PAVPATAKDLISQLLAKDPERRLG 198
                           V   +  P+           P +     DL  + L  DP++R  
Sbjct: 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP- 299

Query: 199 STKGASAIKHHPFFQ 213
                + + HH FFQ
Sbjct: 300 ---FCAELLHHDFFQ 311

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 38/161 (23%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--- 165
            +E     Y  P+I+ G     + +D W +G   +E+  G   F G   E  L  I    
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217

Query: 166 ----------------ARALEFPKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
                            +   +PK  A           +   DL+++LL  +   R+   
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI--- 274

Query: 201 KGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDES 241
             A     HPFF  +   + +      +      +L  + S
Sbjct: 275 -SAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQKEAS 314

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 32/124 (25%), Positives = 45/124 (36%), Gaps = 36/124 (29%)

Query: 111 SFVGTHEYLAPEIVSGE-----GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           SF+GT  ++APE+V  E      +    D W+LGI L E+     P            + 
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP---------HHELN 226

Query: 166 A-RALEF--PKEPAVP---------ATAKDLISQLLAKDPERRLGSTKGASAIK--HHPF 211
             R L     K    P            +D +   L K+PE R       SA +   HPF
Sbjct: 227 PMRVL-LKIAKSDP-PTLLTPSKWSVEFRDFLKIALDKNPETR------PSAAQLLEHPF 278

Query: 212 FQGV 215
              +
Sbjct: 279 VSSI 282

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 48/256 (18%), Positives = 77/256 (30%), Gaps = 99/256 (38%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
             + + DLKPEN+L  +     L +            + +  S +N  I       + D 
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYN---------EHKSCEEKSVKNTSI------RVAD- 185

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
             F SA              F  +         H+              + V T  Y  P
Sbjct: 186 --FGSA-------------TFDHEH--------HT--------------TIVATRHYRPP 208

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--------------- 166
           E++   G   P D W++G  LFE + G T F+  ++   L  +                 
Sbjct: 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK 268

Query: 167 ---------------RALEFPKEPAVP------------ATAKDLISQLLAKDPERRLGS 199
                              + KE   P                DL+ ++L  DP +R+  
Sbjct: 269 QKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI-- 326

Query: 200 TKGASAIKHHPFFQGV 215
               +    HPFF G+
Sbjct: 327 --TLAEALLHPFFAGL 340

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 29/118 (24%)

Query: 111 SFVGTHEYLAPEIVSGE-----GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           +F+GT  ++APE+++ +      +    D W+LGI   E+  G  P   + H +      
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM-HPM------ 240

Query: 166 ARALEF--PKEPAVP--------ATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            RAL F  P+ PA P           +  I   L K+  +R         +  HPF +
Sbjct: 241 -RAL-FLIPRNPA-PRLKSKKWSKKFQSFIESCLVKNHSQR----PATEQLMKHPFIR 291

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 50/256 (19%), Positives = 77/256 (30%), Gaps = 99/256 (38%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
             + + DLKPEN+L     +          +  +        +  NP I       +VD 
Sbjct: 137 NKLTHTDLKPENILFVQSDYT---------EAYNPKIKRDERTLINPDI------KVVD- 180

Query: 62  PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
             F SA              +  +         HS              + V T  Y AP
Sbjct: 181 --FGSA-------------TYDDEH--------HS--------------TLVSTRHYRAP 203

Query: 122 EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA--------------- 166
           E++   G   P D W++G  L E + G T F   D +  LA +                 
Sbjct: 204 EVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK 263

Query: 167 ------RALEFPKEPA----VPATAK-----------------DLISQLLAKDPERRLGS 199
                   L++ +  +    V    K                 DLI ++L  DP +R+  
Sbjct: 264 RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI-- 321

Query: 200 TKGASAIKHHPFFQGV 215
                    HPFF  +
Sbjct: 322 --TLREALKHPFFDLL 335

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 42/157 (26%)

Query: 112 FVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH------------- 157
           +V    Y APE+V   +G    VD W+ G  + E+F     FRG                
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252

Query: 158 --ELTLANIVA-RALEF-----PKEPAVP---------ATAKDLISQLLAKDPERRLGST 200
                +    +  A ++        PA             A DLI+++L  +P+RR+ ST
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI-ST 311

Query: 201 KGASAIKHHPFFQGVNWALLRCTT--PPFVPPPFNRE 235
           + A     HP+F       L         +   F+ +
Sbjct: 312 EQALR---HPYF-----ESLFDPLDLTEGLSERFHFD 340

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 31/139 (22%), Positives = 46/139 (33%), Gaps = 43/139 (30%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--- 165
             E     Y +PE++ G+   G PVD W +G    EL  GV  + G      L  I    
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219

Query: 166 ----------------ARALEFPKE----------PAVPATAKDLISQLLAKDPERRLGS 199
                              ++ P            P +   A  L+   L  DP  RL  
Sbjct: 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL-- 277

Query: 200 TKGASAIK--HHPFFQGVN 216
               +  +  HHP+F+ + 
Sbjct: 278 ----TCEQLLHHPYFENIR 292

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 38.7 bits (91), Expect = 9e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDL 29
             ++RD+KPEN+L+     I L DF  
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGF 148

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 37/167 (22%), Positives = 51/167 (30%), Gaps = 43/167 (25%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           TH+     Y APE++ G    G  VD W +G  L EL   V    G      L  I    
Sbjct: 170 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF-ET 228

Query: 169 L------------------EFPKEPAVP---------ATAKDLISQLLAKDPERRLGSTK 201
           L                   F   P +P             DLI  L   +P  R+    
Sbjct: 229 LGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI---- 284

Query: 202 GASAIKHHPFFQGVNWALLRCTTPPFVP-PPFNRELVSDESCPETPV 247
            A+      +F          T    +P P    E + ++S P   +
Sbjct: 285 TATQALKMKYF----SNRPGPTPGCQLPRPNCPVETLKEQSNPALAI 327

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 44.9 bits (107), Expect = 9e-06
 Identities = 31/134 (23%), Positives = 42/134 (31%), Gaps = 40/134 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           THE     Y  PEI+ G  H  + VD W++     E+      F G      L  I    
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF-EV 253

Query: 169 L-------------------EFPKEPAVP----------ATAKDLISQLLAKDPERRLGS 199
           L                    FPK                   DL++ +L  DP +R+  
Sbjct: 254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRI-- 311

Query: 200 TKGASAIKHHPFFQ 213
              A     HP+F 
Sbjct: 312 --SAKNALEHPYFS 323

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 45.1 bits (107), Expect = 9e-06
 Identities = 49/289 (16%), Positives = 84/289 (29%), Gaps = 104/289 (35%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G+++RD+KP N+L+ ++ H+ + DF LS     S  N + +++  P       E   D  
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLS----RSFVNIRRVTNNIPLSINENTENFDDDQ 184

Query: 63  PF-TSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAP 121
           P  T                                 ++V             T  Y AP
Sbjct: 185 PILT---------------------------------DYVA------------TRWYRAP 199

Query: 122 EI-VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH---------------ELTLANIV 165
           EI +    +   +D W+LG  L E+  G   F G                     + +I 
Sbjct: 200 EILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQ 259

Query: 166 -ARALEF----PKEPAVPAT-------------------------AKDLISQLLAKDPER 195
              A        ++  +  +                         A DL+ +LL  +P +
Sbjct: 260 SPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319

Query: 196 RLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPE 244
           R+     A+    HPF              P         +  +     
Sbjct: 320 RI----SANDALKHPFVSI----FHNPNEEPNCDHIITIPINDNVKHSI 360

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 44.8 bits (107), Expect = 9e-06
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 40/137 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTP-FRGVDHELTLANIVAR 167
           + E     Y  P+++ G     + +D W+ G    EL     P F G D +  L  I  R
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF-R 217

Query: 168 AL------------------EFPKE----------PAVPATAKDLISQLLAKDPERRLGS 199
            L                   +P            P + AT +DL+  LL  +P +R+  
Sbjct: 218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI-- 275

Query: 200 TKGASAIKHHPFFQGVN 216
              A     HP+F    
Sbjct: 276 --SAEEALQHPYFSDFC 290

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 27/160 (16%), Positives = 46/160 (28%), Gaps = 47/160 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           + E     Y AP+++ G     + +D W+ G  L E+  G   F G + E  L  I    
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF-DI 224

Query: 169 L-------------------EFPK--------------EPAVPATAKDLISQLLAKDPER 195
           +                      +              +  +     D +  LL  +P+ 
Sbjct: 225 MGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDM 284

Query: 196 RLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRE 235
           RL     A    HHP+F          +         +  
Sbjct: 285 RL----SAKQALHHPWFAEYY---HHASMGGSRSHHHHHH 317

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 38.7 bits (91), Expect = 9e-04
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
            I++RDLKP+N+L+   G + L DF L+
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLA 155

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSP---VDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           S   +    ++APE +  +   +     D W+  + L+EL     PF  + +      + 
Sbjct: 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA 224

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
              L     P +      L+   + +DP +R
Sbjct: 225 LEGLRPTIPPGISPHVSKLMKICMNEDPAKR 255

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 5/28 (17%), Positives = 11/28 (39%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSL 31
           I    L   +V++  D    ++  D+  
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKF 161

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 39/144 (27%), Positives = 52/144 (36%), Gaps = 32/144 (22%)

Query: 118 YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV----------- 165
           Y APE++ G  +  + +D W+ G  + EL  G   F G      L  I+           
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266

Query: 166 ------ARALEFPK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH 209
                     +FP+           P  P  A DLIS+LL   P  RL     A     H
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL----TAIEALCH 322

Query: 210 PFFQGVNWALLRCTTPPFVPPPFN 233
           PFF  +     R      +PP FN
Sbjct: 323 PFFDELRTGEARMPNGRELPPLFN 346

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 35/259 (13%), Positives = 69/259 (26%), Gaps = 116/259 (44%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           G V+R +K  ++L+  DG + L+    +           +IS                  
Sbjct: 148 GYVHRSVKASHILISVDGKVYLSGLRSN---------LSMISHGQ--------------- 183

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
                                     +++                     V    +L+PE
Sbjct: 184 --------------------------RQRVVHDFPKYS------------VKVLPWLSPE 205

Query: 123 IV--SGEGHGSPVDWWTLGIFLFELFYGVTPF---------------------------- 152
           ++  + +G+ +  D +++GI   EL  G  PF                            
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265

Query: 153 -------RGVDHELTLANIVARALEFPKEPAVPATA---------KDLISQLLAKDPERR 196
                          L++ +  +   P     P+              + Q L ++P+ R
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325

Query: 197 LGSTKGASAIK--HHPFFQ 213
                  SA    +H FF+
Sbjct: 326 ------PSASTLLNHSFFK 338

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
            I +RDLK +N+LV+ +G   + D  L++    S +   + +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN 174

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
            I +RDLK +N+LV+ +G   + D  L++K     +   I  
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP 203

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 26/131 (19%), Positives = 43/131 (32%), Gaps = 33/131 (25%)

Query: 113 VGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-------------- 157
           + T  Y +P + +S   +   +D W  G    E+  G T F G                 
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244

Query: 158 -ELTLANIVARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTKGA 203
            E     +++    +      EP  P           A D + Q+L   P  RL + + A
Sbjct: 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL-TAEEA 303

Query: 204 SAIKHHPFFQG 214
            +   HP+   
Sbjct: 304 LS---HPYMSI 311

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 44/143 (30%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-------------- 157
           +V T  Y APE++ G G+   VD W++G  + E+  G   F G DH              
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245

Query: 158 -ELTLANIVARALEF----PKEPAVP---------------------ATAKDLISQLLAK 191
               +  +      +    PK                          + A+DL+S++L  
Sbjct: 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305

Query: 192 DPERRLGSTKGASAIKHHPFFQG 214
           D  +R+ S   A     HP+   
Sbjct: 306 DASKRI-SVDEALQ---HPYINV 324

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 35/144 (24%), Positives = 46/144 (31%), Gaps = 32/144 (22%)

Query: 118 YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV----------- 165
           Y APE++ G     S +D W+ G  L EL  G   F G      L  I+           
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281

Query: 166 ------ARALEFPKEPAVP----------ATAKDLISQLLAKDPERRLGSTKGASAIKHH 209
                     +FP+  A P            A  L S+LL   P  RL           H
Sbjct: 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL----TPLEACAH 337

Query: 210 PFFQGVNWALLRCTTPPFVPPPFN 233
            FF  +    ++       P  FN
Sbjct: 338 SFFDELRDPNVKLPNGRDTPALFN 361

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 39/152 (25%)

Query: 112 FVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH------------- 157
           +V T  Y APEI+ +   +   VD W++G  + EL  G T F G DH             
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248

Query: 158 --ELTLANIVA-RALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTK 201
                L  I +  A  +     + P +            A DL+ ++L  D ++R+ +  
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI-TAA 307

Query: 202 GASAIKHHPFFQGVNWALLRCTTPPFVPPPFN 233
            A A   H +F     A         V  P++
Sbjct: 308 QALA---HAYF-----AQYHDPDDEPVADPYD 331

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           Y +PE++ G  +   +D W+LG  L E+  G   F G +    +  IV
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 35/152 (23%)

Query: 113 VGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-------------- 157
           V T  Y APE++ +   +   +D W+ G  L ELF     F G D+              
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242

Query: 158 --ELTLANIV-ARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTK 201
             +  L  I   RA E+    P  PA P             DL+ ++L  DP +R+ + K
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI-TAK 301

Query: 202 GASAIKHHPFFQGVNWALLRCTTPPFVPPPFN 233
            A     HP+ Q  +         P  P  F 
Sbjct: 302 EALE---HPYLQTYHDPNDEPEGEPIPPSFFE 330

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 28/46 (60%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNP 48
            +++RDLKP N+L+ S+  + + DF L+   D+SA++    + Q  
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 40/153 (26%)

Query: 112 FVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH------------- 157
           +V T  Y APE++ S   +   VD W++G  + E+  G T F+G D+             
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242

Query: 158 --ELTLANIVA-RALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTK 201
                +  +    A  +    P+ P              A DL+ ++L  D ++RL + +
Sbjct: 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ 302

Query: 202 GASAIKHHPFFQGVNWALLRCTTP-PFVPPPFN 233
              A+  HPFF        R          PF+
Sbjct: 303 ---ALT-HPFF-----EPFRDPEEETEAQQPFD 326

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 39/152 (25%)

Query: 112 FVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH------------- 157
           +V T  Y APE++ +   +   VD W++G  + E+  G T F+G DH             
Sbjct: 185 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 244

Query: 158 --ELTLANIV-ARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTK 201
                +  +    A  +    P+                A +L+ ++L  D E+R+ +  
Sbjct: 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV-TAG 303

Query: 202 GASAIKHHPFFQGVNWALLRCTTPPFVPPPFN 233
            A A   HP+F       L  T        ++
Sbjct: 304 EALA---HPYF-----ESLHDTEDEPQVQKYD 327

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 42.5 bits (100), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIIS 44
            I +RDLK +N+LV+ +G   + D  L+++ D +     I  
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 208

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 118 YLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           Y APE++ G  +G P+D W+LG  L EL  G     G D    LA ++
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNP 48
            I +RDL   NVLV++DG  +++DF LS++   +        D   
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 51/163 (31%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-------------- 157
           +V T  Y APE++ G G+   VD W++G  + E+      F G D+              
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282

Query: 158 -ELTLANIVARALEF----PKEPAVP---------------------ATAKDLISQLLAK 191
               +  +      +    PK   +                      + A+DL+S++L  
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342

Query: 192 DPERRLGSTKGASAIKHHPFFQGVNWALLRCTT--PPFVPPPF 232
           DP +R+       A++ HP+       +           P  +
Sbjct: 343 DPAKRISVDD---ALQ-HPYI-----NVWYDPAEVEAPPPQIY 376

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 40/152 (26%)

Query: 113 VGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-------------- 157
           V T  Y APEI+ + +G+   +D W++G  L E+      F G  +              
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251

Query: 158 -ELTLANIV-ARALEF----PKEPAVP---------ATAKDLISQLLAKDPERRLGSTKG 202
            +  L  I+  +A  +    P +  VP         + A DL+ ++L  +P +R+   + 
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI-EVEQ 310

Query: 203 ASAIKHHPFFQGVNWALLRCTT-PPFVPPPFN 233
           A A   HP+ +          +  P    PF 
Sbjct: 311 ALA---HPYLEQ-----YYDPSDEPIAEAPFK 334

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISD 45
            +++RDLKP N+L+ +   + + DF L+   D    +   +++
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 41/164 (25%)

Query: 111 SFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDH------------ 157
           +++ +  Y APE++ G       +D W++G    EL  G   F G               
Sbjct: 200 AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG 259

Query: 158 ---------------ELTLANIVARALE--FPKEPAVPATAKDLISQLLAKDPERRLGST 200
                          E+    + A+      P+    P+ A DL+ Q+L  +P+ R+   
Sbjct: 260 TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPE--GTPSLAIDLLEQILRYEPDLRI--- 314

Query: 201 KGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPE 244
                   HPFF       LR +    V    N     +++ P+
Sbjct: 315 -NPYEAMAHPFFDH-----LRNSYESEVKNNSNFPHGVNQNIPQ 352

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 27/140 (19%), Positives = 44/140 (31%), Gaps = 41/140 (29%)

Query: 113 VGTHEYLAPEI-VSGEGHGSPVDWWTLGIFLFELFYGVTP-FRGVDHELTLANIV----- 165
           V +  +  PE+ V  + +   +D W+LG  L  + +   P F G D+   L  I      
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250

Query: 166 --------------ARALE--FPKEPAVP--------------ATAKDLISQLLAKDPER 195
                                  +                     A D + +LL  D + 
Sbjct: 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQS 310

Query: 196 RLGSTKGASAIKHHPFFQGV 215
           RL + + A     HP+F  V
Sbjct: 311 RL-TAREAME---HPYFYTV 326

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 47/275 (17%), Positives = 77/275 (28%), Gaps = 109/275 (39%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI++RDLKP N LV  D  + + DF L          A+ +                   
Sbjct: 176 GILHRDLKPANCLVNQDCSVKVCDFGL----------ARTVDYPENG------------- 212

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMS-FVGTHEYLAP 121
                                 +     +    +   F       R ++  V T  Y AP
Sbjct: 213 --------------------NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252

Query: 122 EIVSGEGH-GSPVDWWTLGIFLFELFYGVTP-----------FRGVD------------- 156
           E++  + +    +D W++G    EL   +             F G               
Sbjct: 253 ELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGND 312

Query: 157 ---------HELTL----------------ANIVARA--LEFPKEPAVP---------AT 180
                     +L +                    A+     FPK              A 
Sbjct: 313 FKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSAD 372

Query: 181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
           A  L+ ++L  +P +R+ +     A   HPFF+ V
Sbjct: 373 AIHLLKRMLVFNPNKRI-TINECLA---HPFFKEV 403

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
             I +RD+K +NVL++++    + DF L+LK +   S
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 40/134 (29%)

Query: 115 THE-----YLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV--- 165
           T+      Y  PE++ GE   G P+D W  G  + E++      +G   +  LA I    
Sbjct: 186 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 245

Query: 166 ----------------ARALEFPKEP-----------AVPATAKDLISQLLAKDPERRLG 198
                              LE  K                  A DLI +LL  DP +R+ 
Sbjct: 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI- 304

Query: 199 STKGASAIKHHPFF 212
               +    +H FF
Sbjct: 305 ---DSDDALNHDFF 315

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 5e-04
 Identities = 40/234 (17%), Positives = 68/234 (29%), Gaps = 66/234 (28%)

Query: 1   MLGI--------VYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAV 52
           +LG         V    K   V  + D  I    F L+LK  +S             + +
Sbjct: 158 VLGSGKTWVALDVCLSYK---VQCKMDFKI----FWLNLKNCNSPETV---------LEM 201

Query: 53  LQNEYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSF 112
           LQ       P +TS S    N  +   S  + + +R  K+  +     V+   +V+    
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHS-IQAELRRLLKSKPYENCLLVLL--NVQ---- 254

Query: 113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFE---LFYGVTPFRGVDHELTLANIVARAL 169
                                +      F      L    T F+ V   L+ A     +L
Sbjct: 255 ---------------------NAKAWNAFNLSCKILL--TTRFKQVTDFLSAATTTHISL 291

Query: 170 EFPKEPAVPATAKDLISQLLAKDPE--RRLGSTKGASAIKHHPFFQGVNWALLR 221
           +       P   K L+ + L   P+   R         +  +P    +    +R
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPR-------EVLTTNPRRLSIIAESIR 338

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 38/239 (15%), Positives = 64/239 (26%), Gaps = 78/239 (32%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI++RDLKP N L+  D  + + DF L+   +       +   +        N+ L    
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ- 207

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
             T                                   VV            T  Y APE
Sbjct: 208 -LT---------------------------------SHVV------------TRWYRAPE 221

Query: 123 IVSGEGH-GSPVDWWTLGIFLFELFYGVTP-----------FRGVDHELTLANIVARALE 170
           ++  + +    +D W+ G    EL   +             F G                
Sbjct: 222 LILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLS--------- 272

Query: 171 FPKEPAVPATAKD------LISQLLAKDPE---RRLGSTKGASAIKHHPFFQGVNWALL 220
            P   +     K       +I  ++    E   + +   +    IK  P  + +N    
Sbjct: 273 -PDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQK 330

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 3   GIVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQIISDQNPPI 50
            +VYRD+KP+N L+          I + DF +     D  +   I   +   +
Sbjct: 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL 178

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 3   GIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPP 49
             ++RD+KP+N L+        + + DF L+ K  D+ ++  I   +N  
Sbjct: 125 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.98
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.98
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.98
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.95
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.95
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
3bhy_A	283	Death-associated protein kinase 3; death associate	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.95
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.94
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.94
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.93
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.93
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.92
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.92
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.92
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.92
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.92
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.92
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.92
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.92
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.92
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.92
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.92
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.92
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.91
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.91
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.9
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.89
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.88
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.84
3uqc_A	286	Probable conserved transmembrane protein; structur	99.78
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.63
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.1
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.77
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.27
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.23
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.39
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.29
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.69
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.37
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.81
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	93.74
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	93.25
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	93.12
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.11
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.46
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.27
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.23
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	92.18
3ats_A	357	Putative uncharacterized protein; hypothetical pro	92.12
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	90.9
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.75
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.05
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	88.88
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	88.84
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	88.64
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	88.48
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	88.02
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	87.39
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	84.13
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.37
3mes_A	424	Choline kinase; malaria, structural genomics, stru	81.3

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.3e-42  Score=292.63  Aligned_cols=158  Identities=44%  Similarity=0.875  Sum_probs=135.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++......                                           
T Consensus       144 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-------------------------------------------  180 (304)
T 3ubd_A          144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-------------------------------------------  180 (304)
T ss_dssp             HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------------------------------------------------
T ss_pred             HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC-------------------------------------------
Confidence            3699999999999999999999999999986432211                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ....+++||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+..+.
T Consensus       181 --------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~  234 (304)
T 3ubd_A          181 --------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET  234 (304)
T ss_dssp             --------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             --------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH
Confidence                                      011235799999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVP  229 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~  229 (250)
                      +.++.+....+|  ..+++++.+||.+||++||++|+|+. +.++++++||||+++||..+  +++.||++|
T Consensus       235 ~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          235 MTMILKAKLGMP--QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             HHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             HHHHHcCCCCCC--CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            888888766554  47999999999999999999999954 34789999999999999987  567788887

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.3e-42  Score=290.49  Aligned_cols=159  Identities=38%  Similarity=0.714  Sum_probs=136.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       150 ~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------  187 (311)
T 4aw0_A          150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK------------------------------------------  187 (311)
T ss_dssp             HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT------------------------------------------
T ss_pred             HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC------------------------------------------
Confidence            37999999999999999999999999999976432211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               .....+++||+.|||||++.+..|+.++||||+||++|+|++|..||.+.+..+.
T Consensus       188 -------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~  242 (311)
T 4aw0_A          188 -------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI  242 (311)
T ss_dssp             -------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             -------------------------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                     0112246899999999999999999999999999999999999999999998999


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc--ChHHHhcCCCCCCCCccccccCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK--GASAIKHHPFFQGVNWALLRCTTPPFV  228 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~--~a~~ll~hp~~~~~~~~~~~~~~~~~~  228 (250)
                      +.+|++....+|.  .+++++++||.+||++||++|+|..+  ...++++||||++++|..+...+||.+
T Consensus       243 ~~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l  310 (311)
T 4aw0_A          243 FAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL  310 (311)
T ss_dssp             HHHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred             HHHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCCCCCC
Confidence            9999888776654  69999999999999999999999544  234579999999999999998887764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.6e-39  Score=295.67  Aligned_cols=175  Identities=31%  Similarity=0.603  Sum_probs=139.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|++||+|||+++.....                                            
T Consensus       310 ~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~--------------------------------------------  345 (689)
T 3v5w_A          310 NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------------------------------------------  345 (689)
T ss_dssp             TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------
T ss_pred             HCCccccCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------
Confidence            479999999999999999999999999998553211                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC---
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVD---  156 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~---  156 (250)
                                                 ...+++||+.|||||++.+ ..|+.++|||||||++|||++|..||.+.+   
T Consensus       346 ---------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~  398 (689)
T 3v5w_A          346 ---------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  398 (689)
T ss_dssp             ---------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred             ---------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                                       1123589999999999974 579999999999999999999999997643   


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      .......+......+  +..++.++++||.+||++||++|++. ...|+++++||||+++||..+  ++++||++|+...
T Consensus       399 ~~~i~~~i~~~~~~~--p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~  476 (689)
T 3v5w_A          399 KHEIDRMTLTMAVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGE  476 (689)
T ss_dssp             HHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTC
T ss_pred             HHHHHHhhcCCCCCC--CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCC
Confidence            233444455544444  45799999999999999999999985 356899999999999999987  5688999999887


Q ss_pred             cCCCCCCCCCCCCcc
Q 025601          234 RELVSDESCPETPVE  248 (250)
Q Consensus       234 ~~~~~~~~~~~~~~~  248 (250)
                      ....+..|.++++.|
T Consensus       477 ~~~~~~fD~~~fd~e  491 (689)
T 3v5w_A          477 VNAADAFDIGSFDEE  491 (689)
T ss_dssp             SSTTBCCC-------
T ss_pred             CCcCCCCCCccCCcc
Confidence            777776666655443

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=3.4e-38  Score=269.74  Aligned_cols=142  Identities=29%  Similarity=0.540  Sum_probs=120.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       188 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------  225 (346)
T 4fih_A          188 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------  225 (346)
T ss_dssp             HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC------------------------------------------
T ss_pred             HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC------------------------------------------
Confidence            36999999999999999999999999999865432110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ...+++||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..+.
T Consensus       226 ---------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~  278 (346)
T 4fih_A          226 ---------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA  278 (346)
T ss_dssp             ---------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             ---------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence                                       11245899999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +..+...... .+....+++++++||.+||++||++|||    ++++|+||||+..
T Consensus       279 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l~Hp~~~~~  330 (346)
T 4fih_A          279 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA  330 (346)
T ss_dssp             HHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred             HHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhcCC
Confidence            8777665332 3333568999999999999999999999    9999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=7.6e-38  Score=260.16  Aligned_cols=138  Identities=30%  Similarity=0.486  Sum_probs=113.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++......                                           
T Consensus       130 ~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-------------------------------------------  166 (275)
T 3hyh_A          130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------------------------------------------  166 (275)
T ss_dssp             HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------------------------------------------------
T ss_pred             HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-------------------------------------------
Confidence            3799999999999999999999999999985532211                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ...+.+||+.|||||++.+..+ +.++||||+||++|+|++|+.||.+.+...
T Consensus       167 ---------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~  219 (275)
T 3hyh_A          167 ---------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV  219 (275)
T ss_dssp             -----------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                                       0112479999999999999886 689999999999999999999999988888


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+.++......+|  ..+++++++||.+||++||++|||    ++++++||||+.
T Consensus       220 ~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hpw~k~  268 (275)
T 3hyh_A          220 LFKNISNGVYTLP--KFLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV  268 (275)
T ss_dssp             HHHHHHHTCCCCC--TTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHCHHHHT
T ss_pred             HHHHHHcCCCCCC--CCCCHHHHHHHHHHccCChhHCcC----HHHHHcCccccc
Confidence            8888877765554  479999999999999999999999    999999999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=3.3e-38  Score=270.18  Aligned_cols=139  Identities=25%  Similarity=0.438  Sum_probs=122.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|.+||+|||+++........                                          
T Consensus       144 ~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~------------------------------------------  181 (350)
T 4b9d_A          144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL------------------------------------------  181 (350)
T ss_dssp             TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH------------------------------------------
T ss_pred             CCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc------------------------------------------
Confidence            69999999999999999999999999999765321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 ...++||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+.+
T Consensus       182 ---------------------------~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~  234 (350)
T 4b9d_A          182 ---------------------------ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV  234 (350)
T ss_dssp             ---------------------------HHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ---------------------------ccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence                                       01247999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+++....+ +....++.++.+||.+||++||++|||    ++++|+||||..
T Consensus       235 ~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~  282 (350)
T 4b9d_A          235 LKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSILEKGFIAK  282 (350)
T ss_dssp             HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHT
T ss_pred             HHHHcCCCC-CCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHHhhc
Confidence            888877654 445579999999999999999999999    999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=270.51  Aligned_cols=142  Identities=29%  Similarity=0.542  Sum_probs=121.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       265 ~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~------------------------------------------  302 (423)
T 4fie_A          265 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------------------------------------------  302 (423)
T ss_dssp             HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC------------------------------------------
T ss_pred             HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc------------------------------------------
Confidence            36999999999999999999999999999865432110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ...+++||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..+.
T Consensus       303 ---------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~  355 (423)
T 4fie_A          303 ---------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA  355 (423)
T ss_dssp             ---------------------------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             ---------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence                                       11245899999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +..|..... ..+....++.++++||.+||++||++|+|    ++++|+||||+..
T Consensus       356 ~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell~Hp~~~~~  407 (423)
T 4fie_A          356 MKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA  407 (423)
T ss_dssp             HHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred             HHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHHhcCC
Confidence            877766533 23344578999999999999999999999    9999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.4e-37  Score=256.18  Aligned_cols=137  Identities=21%  Similarity=0.395  Sum_probs=111.3

Q ss_pred             cc--ceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LG--IVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~g--iiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +|  ||||||||+|||++. +|.+||+|||+++.....                                          
T Consensus       148 ~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~------------------------------------------  185 (290)
T 3fpq_A          148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS------------------------------------------  185 (290)
T ss_dssp             SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT------------------------------------------
T ss_pred             CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC------------------------------------------
Confidence            46  999999999999984 799999999998532211                                          


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   ...+++||+.|||||++.+ .|+.++|||||||++|||++|+.||.+....
T Consensus       186 -----------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~  235 (290)
T 3fpq_A          186 -----------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA  235 (290)
T ss_dssp             -----------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH
T ss_pred             -----------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH
Confidence                                         0113479999999999875 5999999999999999999999999887766


Q ss_pred             HHHHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..+.+.+.... +...+..+++++.+||.+||+.||++|||    ++++|+||||++
T Consensus       236 ~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e~l~Hp~~~~  288 (290)
T 3fpq_A          236 AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred             HHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccC
Confidence            65555544332 22234567899999999999999999999    999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-36  Score=259.51  Aligned_cols=148  Identities=23%  Similarity=0.331  Sum_probs=117.6

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.+| ++||+|||+++..........                                      
T Consensus       168 ~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~--------------------------------------  209 (336)
T 4g3f_A          168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS--------------------------------------  209 (336)
T ss_dssp             TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------------------------------
T ss_pred             HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc--------------------------------------
Confidence            47999999999999999887 699999999976543211100                                      


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ......++||+.|||||++.+..|+.++|||||||++|||++|+.||.+.....
T Consensus       210 --------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~  263 (336)
T 4g3f_A          210 --------------------------LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP  263 (336)
T ss_dssp             ------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred             --------------------------eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence                                      001123579999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHhccCCC-CCCCCChHHHHHHHHhcccCccccCCCccChHHH-------------hcCCCCCCCC
Q 025601          160 TLANIVARALEFP-KEPAVPATAKDLISQLLAKDPERRLGSTKGASAI-------------KHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p-~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l-------------l~hp~~~~~~  216 (250)
                      .+.++.....++. .+..+++.+.+||.+||++||++|||    +.|+             |.|||+....
T Consensus       264 ~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----a~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          264 LCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRAS----AMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             CHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             HHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcC----HHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            7777776554322 34578999999999999999999999    7765             5789987754

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.2e-36  Score=262.25  Aligned_cols=149  Identities=24%  Similarity=0.355  Sum_probs=121.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.........                                        
T Consensus       176 ~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~----------------------------------------  215 (398)
T 4b99_A          176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH----------------------------------------  215 (398)
T ss_dssp             HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-----------------------------------------------
T ss_pred             HCcCcCCCcCccccccCCCCCEEEeecceeeecccCcccc----------------------------------------
Confidence            3799999999999999999999999999996643321100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               .....+++||+.|||||++.+.. ++.++||||+||++|||++|+.||.+.+..+
T Consensus       216 -------------------------~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~  270 (398)
T 4b99_A          216 -------------------------QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH  270 (398)
T ss_dssp             -------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH
T ss_pred             -------------------------ccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH
Confidence                                     01122458999999999998865 6999999999999999999999999999998


Q ss_pred             HHHHHHHhccCCCCC-----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~-----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ++..|....+..+..                             ..++.++.+||.+||++||++|+|    |+++|+||
T Consensus       271 ~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp  346 (398)
T 4b99_A          271 QLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAAALRHP  346 (398)
T ss_dssp             HHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHHTTSG
T ss_pred             HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHHhcCH
Confidence            888887655443211                             246889999999999999999999    99999999


Q ss_pred             CCCCCCcc
Q 025601          211 FFQGVNWA  218 (250)
Q Consensus       211 ~~~~~~~~  218 (250)
                      ||+.....
T Consensus       347 ~f~~~~~p  354 (398)
T 4b99_A          347 FLAKYHDP  354 (398)
T ss_dssp             GGTTTCCG
T ss_pred             hhCcCCCC
Confidence            99987643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=8e-36  Score=257.64  Aligned_cols=171  Identities=26%  Similarity=0.399  Sum_probs=113.4

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.+ +.+||+|||+|+...................         ......              
T Consensus       135 ~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~---------~~~~~~--------------  191 (361)
T 4f9c_A          135 QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQ---------ERCSQN--------------  191 (361)
T ss_dssp             HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----------------------------------
T ss_pred             HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccc---------cccccc--------------
Confidence            3799999999999999876 8999999999976554322111100000000         000000              


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCC-Ch
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGV-DH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~-~~  157 (250)
                                        ...............+||+.|+|||++.+.. |+.++||||+||++|||++|+.||.+. +.
T Consensus       192 ------------------~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~  253 (361)
T 4f9c_A          192 ------------------KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD  253 (361)
T ss_dssp             --------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ------------------cccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence                              0000000011123458999999999998864 899999999999999999999999654 44


Q ss_pred             HHHHHHHHHhcc----------------------------------------------------CCCCCCCCChHHHHHH
Q 025601          158 ELTLANIVARAL----------------------------------------------------EFPKEPAVPATAKDLI  185 (250)
Q Consensus       158 ~~~~~~i~~~~~----------------------------------------------------~~p~~~~~~~~~~~ll  185 (250)
                      .+++..|....+                                                    .......+++++.+||
T Consensus       254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl  333 (361)
T 4f9c_A          254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL  333 (361)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence            455555443111                                                    0011235789999999


Q ss_pred             HHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          186 SQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       186 ~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .+||++||++|+|    |+|+|+||||++++
T Consensus       334 ~~lL~~dP~~R~t----a~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          334 DKLLDLNPASRIT----AEEALLHPFFKDMS  360 (361)
T ss_dssp             HHHTCSCTTTSCC----HHHHHTSGGGTTC-
T ss_pred             HHHCcCChhHCcC----HHHHhcCcccCCCC
Confidence            9999999999999    99999999999976

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.5e-36  Score=255.85  Aligned_cols=153  Identities=28%  Similarity=0.503  Sum_probs=102.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++..............                                   
T Consensus       136 ~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~-----------------------------------  180 (299)
T 4g31_A          136 SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP-----------------------------------  180 (299)
T ss_dssp             HTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------------------------------
T ss_pred             HCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccc-----------------------------------
Confidence            369999999999999999999999999999765443221110000                                   


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~-  159 (250)
                                            ........+.+||+.|||||++.+..|+.++|||||||++|||++   ||.+..... 
T Consensus       181 ----------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~  235 (299)
T 4g31_A          181 ----------------------MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR  235 (299)
T ss_dssp             ---------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             ----------------------cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence                                  000011224589999999999999999999999999999999996   786533221 


Q ss_pred             HHHHHHHhccCCC-CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          160 TLANIVARALEFP-KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       160 ~~~~i~~~~~~~p-~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .+..+..  ..+| .....++.+.+||.+||+.||++|||    +.++|+||||++++|+.
T Consensus       236 ~~~~~~~--~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          236 TLTDVRN--LKFPPLFTQKYPCEYVMVQDMLSPSPMERPE----AINIIENAVFEDLDFPG  290 (299)
T ss_dssp             HHHHHHT--TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGCCC----
T ss_pred             HHHHHhc--CCCCCCCcccCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCCCCCCC
Confidence            2222222  2222 11234567889999999999999999    99999999999999854

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=255.83  Aligned_cols=167  Identities=37%  Similarity=0.725  Sum_probs=138.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++.......                                           
T Consensus       143 ~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~-------------------------------------------  179 (353)
T 3txo_A          143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-------------------------------------------  179 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------------------------------------------
T ss_pred             CCCcccCCCHHHEEECCCCCEEEccccceeecccCCc-------------------------------------------
Confidence            6999999999999999999999999999854222110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       180 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~  233 (353)
T 3txo_A          180 --------------------------TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF  233 (353)
T ss_dssp             --------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------------cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      112357999999999999888999999999999999999999999999999899


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELV  237 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~  237 (250)
                      ..+......+|.  .++..+.+||.+||++||++|+++.  ..+++++.||||++++|..+  +...||+.|...+....
T Consensus       234 ~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~  311 (353)
T 3txo_A          234 EAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDV  311 (353)
T ss_dssp             HHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCC
T ss_pred             HHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCCcccc
Confidence            888887766554  6899999999999999999999942  33499999999999999987  55788898887655544


Q ss_pred             CC
Q 025601          238 SD  239 (250)
Q Consensus       238 ~~  239 (250)
                      ++
T Consensus       312 ~~  313 (353)
T 3txo_A          312 SN  313 (353)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=3.3e-35  Score=255.08  Aligned_cols=164  Identities=41%  Similarity=0.751  Sum_probs=139.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++......                                            
T Consensus       158 ~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~--------------------------------------------  193 (373)
T 2r5t_A          158 LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--------------------------------------------  193 (373)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC--------------------------------------------
T ss_pred             CCceecCCCHHHEEECCCCCEEEeeCccccccccCC--------------------------------------------
Confidence            699999999999999999999999999985421110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+..
T Consensus       194 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~  248 (373)
T 2r5t_A          194 -------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY  248 (373)
T ss_dssp             -------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH
T ss_pred             -------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence                                     0112357999999999999999999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNREL  236 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~  236 (250)
                      .+++.....++  ..++..+.+||.+||+.||++|+++.+.+.+++.||||++++|..+  +++.||+.|...+...
T Consensus       249 ~~i~~~~~~~~--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d  323 (373)
T 2r5t_A          249 DNILNKPLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPND  323 (373)
T ss_dssp             HHHHHSCCCCC--SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC---
T ss_pred             HHHHhcccCCC--CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCcch
Confidence            88887755544  4689999999999999999999998888899999999999999987  5678999997655433

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=7.8e-35  Score=249.51  Aligned_cols=164  Identities=38%  Similarity=0.720  Sum_probs=136.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++......                                            
T Consensus       124 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--------------------------------------------  159 (337)
T 1o6l_A          124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--------------------------------------------  159 (337)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--------------------------------------------
T ss_pred             CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--------------------------------------------
Confidence            699999999999999999999999999985422110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.....
T Consensus       160 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  214 (337)
T 1o6l_A          160 -------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF  214 (337)
T ss_dssp             -------------------------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------------------------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHH
Confidence                                     0111357999999999999988999999999999999999999999998888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNREL  236 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~  236 (250)
                      ..+......+|  ..++.++.+||.+||+.||++|++.. ..++++++||||++++|..+  ++..||+.|...+...
T Consensus       215 ~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d  290 (337)
T 1o6l_A          215 ELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVD  290 (337)
T ss_dssp             HHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTC
T ss_pred             HHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCcch
Confidence            88877665554  46899999999999999999999321 13999999999999999977  5577888888755433

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.8e-35  Score=259.43  Aligned_cols=168  Identities=36%  Similarity=0.704  Sum_probs=139.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|.+||+|||+++.......                                           
T Consensus       194 ~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~-------------------------------------------  230 (437)
T 4aw2_A          194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT-------------------------------------------  230 (437)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------
T ss_pred             CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC-------------------------------------------
Confidence            6899999999999999999999999999855432110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                               ......+||+.|+|||++.     +..++.++|||||||++|||++|..||.+.+
T Consensus       231 -------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~  285 (437)
T 4aw2_A          231 -------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES  285 (437)
T ss_dssp             -------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence                                     0111247999999999997     4458999999999999999999999999999


Q ss_pred             hHHHHHHHHHhc--cCCCCC-CCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCccccccCCCCCCCCC
Q 025601          157 HELTLANIVARA--LEFPKE-PAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP  231 (250)
Q Consensus       157 ~~~~~~~i~~~~--~~~p~~-~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~  231 (250)
                      ..+...+++...  ..+|.. ..++.++++||.+||..+|++  |++    ++++++||||++++|..+....||++|+.
T Consensus       286 ~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~----~~eil~Hpff~~i~w~~l~~~~~p~~P~~  361 (437)
T 4aw2_A          286 LVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG----IEDFKKHPFFSGIDWDNIRNCEAPYIPEV  361 (437)
T ss_dssp             HHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTT----THHHHTSGGGTTCCTTTGGGSCCSCCCCC
T ss_pred             hhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCC----HHHHhCCCccCCCCHHHHhhCCCCCCCcC
Confidence            888888887643  334432 458999999999999998888  888    99999999999999999999999999988


Q ss_pred             CCcCCCCCCC
Q 025601          232 FNRELVSDES  241 (250)
Q Consensus       232 ~~~~~~~~~~  241 (250)
                      .+....++.|
T Consensus       362 ~~~~d~~~fd  371 (437)
T 4aw2_A          362 SSPTDTSNFD  371 (437)
T ss_dssp             SSTTCCTTSC
T ss_pred             CCccchhhcC
Confidence            7665555443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=9.1e-35  Score=250.58  Aligned_cols=162  Identities=36%  Similarity=0.763  Sum_probs=138.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++......                                            
T Consensus       140 ~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--------------------------------------------  175 (353)
T 2i0e_A          140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--------------------------------------------  175 (353)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--------------------------------------------
T ss_pred             CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC--------------------------------------------
Confidence            699999999999999999999999999985422110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       176 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~  230 (353)
T 2i0e_A          176 -------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF  230 (353)
T ss_dssp             -------------------------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------------------------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHH
Confidence                                     0111357999999999999988999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCc
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNR  234 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~  234 (250)
                      .+++.....+|  ..++.++.+||.+||+.||++|+++. +.+++++.||||++++|..+  ++..||+.|.....
T Consensus       231 ~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~  304 (353)
T 2i0e_A          231 QSIMEHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR  304 (353)
T ss_dssp             HHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC
T ss_pred             HHHHhCCCCCC--CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc
Confidence            88888766655  47999999999999999999999753 34899999999999999987  66889999876543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.6e-34  Score=252.39  Aligned_cols=166  Identities=37%  Similarity=0.756  Sum_probs=132.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++......                                            
T Consensus       172 ~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--------------------------------------------  207 (396)
T 4dc2_A          172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--------------------------------------------  207 (396)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--------------------------------------------
T ss_pred             CCEEeccCCHHHEEECCCCCEEEeecceeeecccCC--------------------------------------------
Confidence            699999999999999999999999999985422111                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-----  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-----  156 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+..     
T Consensus       208 -------------------------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~  262 (396)
T 4dc2_A          208 -------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP  262 (396)
T ss_dssp             -------------------------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----
T ss_pred             -------------------------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc
Confidence                                     01123579999999999999999999999999999999999999996432     


Q ss_pred             ----hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCcccc--ccCCCCCC
Q 025601          157 ----HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALL--RCTTPPFV  228 (250)
Q Consensus       157 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~--~~~~~~~~  228 (250)
                          .......+......+|  ..++.++.+||.+||+.||++|++..  ..+++++.||||++++|..+  ++..||+.
T Consensus       263 ~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~pp~~  340 (396)
T 4dc2_A          263 DQNTEDYLFQVILEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK  340 (396)
T ss_dssp             --CCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSCCSCC
T ss_pred             chhhHHHHHHHHhccccCCC--CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCCCCCc
Confidence                2234445555554444  46999999999999999999999953  23689999999999999987  45778888


Q ss_pred             CCCCCcCCCC
Q 025601          229 PPPFNRELVS  238 (250)
Q Consensus       229 ~~~~~~~~~~  238 (250)
                      |...+....+
T Consensus       341 p~~~~~~d~~  350 (396)
T 4dc2_A          341 PNISGEFGLD  350 (396)
T ss_dssp             CCCCSSTTGG
T ss_pred             CCCCCccchh
Confidence            8876544433

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=6.7e-35  Score=250.68  Aligned_cols=158  Identities=39%  Similarity=0.782  Sum_probs=128.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++......                                            
T Consensus       137 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--------------------------------------------  172 (345)
T 1xjd_A          137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--------------------------------------------  172 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--------------------------------------------
T ss_pred             CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC--------------------------------------------
Confidence            699999999999999999999999999985422110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.....
T Consensus       173 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  227 (345)
T 1xjd_A          173 -------------------------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF  227 (345)
T ss_dssp             -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------------------------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence                                     0112357999999999999988999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChH-HHhcCCCCCCCCcccc--ccCCCCCCCCCCCc
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS-AIKHHPFFQGVNWALL--RCTTPPFVPPPFNR  234 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~-~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~  234 (250)
                      ..+......++  ..++.++.+||.+||+.||++||+    +. ++++||||++++|..+  ..+.||+.|...+.
T Consensus       228 ~~i~~~~~~~p--~~~s~~~~~li~~lL~~dp~~R~~----~~~~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~  297 (345)
T 1xjd_A          228 HSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP  297 (345)
T ss_dssp             HHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC---------
T ss_pred             HHHHhCCCCCC--cccCHHHHHHHHHHhcCCHhHcCC----ChHHHHcCccccCCCHHHHhhCCCCCCcCCCCCCc
Confidence            88877665544  468999999999999999999999    66 8999999999999988  55778888876443

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2e-34  Score=252.98  Aligned_cols=168  Identities=36%  Similarity=0.684  Sum_probs=140.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++.......                                           
T Consensus       187 ~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~-------------------------------------------  223 (410)
T 3v8s_A          187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM-------------------------------------------  223 (410)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE-------------------------------------------
T ss_pred             CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc-------------------------------------------
Confidence            6999999999999999999999999999865432210                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG----HGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                               ......+||+.|+|||++.+..    ++.++|||||||++|+|++|..||.+.+.
T Consensus       224 -------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  278 (410)
T 3v8s_A          224 -------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL  278 (410)
T ss_dssp             -------------------------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             -------------------------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh
Confidence                                     0111347999999999998765    78999999999999999999999999998


Q ss_pred             HHHHHHHHHhc--cCCCCCCCCChHHHHHHHHhcccCccc--cCCCccChHHHhcCCCCCCCCcc--ccccCCCCCCCCC
Q 025601          158 ELTLANIVARA--LEFPKEPAVPATAKDLISQLLAKDPER--RLGSTKGASAIKHHPFFQGVNWA--LLRCTTPPFVPPP  231 (250)
Q Consensus       158 ~~~~~~i~~~~--~~~p~~~~~~~~~~~ll~~~L~~dP~~--R~t~~~~a~~ll~hp~~~~~~~~--~~~~~~~~~~~~~  231 (250)
                      .....+|+...  ..+|....++.++++||.+||+.+|++  |++    +++++.||||++++|.  .+++..||++|..
T Consensus       279 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~----~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~  354 (410)
T 3v8s_A          279 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPVVPDL  354 (410)
T ss_dssp             HHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSC----HHHHHTSGGGCCSSCCSTTGGGSCCSCCCCC
T ss_pred             hhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCC----HHHHhcCccccCCCHHHHhhcccCCCCCCcC
Confidence            88888887653  456666689999999999999998888  999    9999999999999886  4577889999988


Q ss_pred             CCcCCCCCCC
Q 025601          232 FNRELVSDES  241 (250)
Q Consensus       232 ~~~~~~~~~~  241 (250)
                      .+....++.|
T Consensus       355 ~~~~d~~~fd  364 (410)
T 3v8s_A          355 SSDIDTSNFD  364 (410)
T ss_dssp             SSTTCCTTSC
T ss_pred             CCccchhhcC
Confidence            6655555433

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=4.3e-34  Score=246.08  Aligned_cols=164  Identities=35%  Similarity=0.679  Sum_probs=140.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|.+||+|||+++.....                                             
T Consensus       160 ~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---------------------------------------------  194 (350)
T 1rdq_E          160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------------------------------------------  194 (350)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC---------------------------------------------
T ss_pred             CCcccccCccceEEECCCCCEEEcccccceeccCC---------------------------------------------
Confidence            69999999999999999999999999998543211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       195 ---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  247 (350)
T 1rdq_E          195 ---------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY  247 (350)
T ss_dssp             ---------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ---------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH
Confidence                                       11247899999999999988999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELVS  238 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  238 (250)
                      ..+......+|  ..++.++.+||.+||+.||++|++. .+.++++++||||++++|..+  +...+|++|........+
T Consensus       248 ~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~  325 (350)
T 1rdq_E          248 EKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTS  325 (350)
T ss_dssp             HHHHHCCCCCC--TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCT
T ss_pred             HHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCccccc
Confidence            88887765554  4689999999999999999999984 345899999999999999977  467899999876655444


Q ss_pred             C
Q 025601          239 D  239 (250)
Q Consensus       239 ~  239 (250)
                      +
T Consensus       326 ~  326 (350)
T 1rdq_E          326 N  326 (350)
T ss_dssp             T
T ss_pred             c
Confidence            3

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-34  Score=243.31  Aligned_cols=158  Identities=39%  Similarity=0.799  Sum_probs=135.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.+|.+||+|||+++.....                                            
T Consensus       124 ~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~--------------------------------------------  159 (318)
T 1fot_A          124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--------------------------------------------  159 (318)
T ss_dssp             TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------
T ss_pred             HCCccccCCChheEEEcCCCCEEEeecCcceecCCc--------------------------------------------
Confidence            479999999999999999999999999998542210                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       160 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  211 (318)
T 1fot_A          160 ----------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  211 (318)
T ss_dssp             ----------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                        1124689999999999998899999999999999999999999999888888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccc--ccCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPPPF  232 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~  232 (250)
                      ..+++.....+|  ..++.++.+||.+||+.||++|++... .++++++||||++++|..+  +...+|+.|+..
T Consensus       212 ~~~i~~~~~~~p--~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~  284 (318)
T 1fot_A          212 YEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQ  284 (318)
T ss_dssp             HHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC-
T ss_pred             HHHHHhCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCCCCcC
Confidence            888888766554  468999999999999999999994322 3999999999999999987  557789998875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5.3e-34  Score=252.89  Aligned_cols=172  Identities=39%  Similarity=0.727  Sum_probs=135.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       268 ~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------  304 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------  304 (446)
T ss_dssp             TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----------------------------------------------
T ss_pred             CCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc-------------------------------------------
Confidence            6899999999999999999999999999854222110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       305 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  358 (446)
T 4ejn_A          305 --------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF  358 (446)
T ss_dssp             ----------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH
Confidence                                      011247999999999999999999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELVS  238 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  238 (250)
                      ..+......+|  ..++.++.+||.+||+.||++||+.. +.++++++||||.+++|..+  ....||+.|...     +
T Consensus       359 ~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~-----~  431 (446)
T 4ejn_A          359 ELILMEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVT-----S  431 (446)
T ss_dssp             HHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCS-----S
T ss_pred             HHHHhCCCCCC--ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCccCCCC-----C
Confidence            88877766554  46899999999999999999999211 12999999999999999987  445566666554     3


Q ss_pred             CCCCCCCCccC
Q 025601          239 DESCPETPVEY  249 (250)
Q Consensus       239 ~~~~~~~~~~~  249 (250)
                      ..|.+.+..||
T Consensus       432 ~~~~~~~~~~~  442 (446)
T 4ejn_A          432 ETDTRYFDEEF  442 (446)
T ss_dssp             TTCCTTC----
T ss_pred             ccchhhcchhh
Confidence            44444444443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.3e-34  Score=252.78  Aligned_cols=168  Identities=43%  Similarity=0.798  Sum_probs=132.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++.......                                           
T Consensus       181 ~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~-------------------------------------------  217 (412)
T 2vd5_A          181 LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT-------------------------------------------  217 (412)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC-------------------------------------------
T ss_pred             CCeeecccCHHHeeecCCCCEEEeechhheeccCCCc-------------------------------------------
Confidence            6999999999999999999999999999865432110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-------CCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-------GEGHGSPVDWWTLGIFLFELFYGVTPFRG  154 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~vl~elltg~~pf~~  154 (250)
                                               ......+||+.|+|||++.       +..++.++|||||||++|||++|..||.+
T Consensus       218 -------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~  272 (412)
T 2vd5_A          218 -------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA  272 (412)
T ss_dssp             -------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence                                     0111347999999999997       34589999999999999999999999999


Q ss_pred             CChHHHHHHHHHhc--cCCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCC
Q 025601          155 VDHELTLANIVARA--LEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPP  231 (250)
Q Consensus       155 ~~~~~~~~~i~~~~--~~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~  231 (250)
                      .+..+...+++...  ..+|. ...++.++.+||.+||. +|.+|+.. ..+++++.||||++++|..+....||++|..
T Consensus       273 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr-~~~~ei~~Hpff~~i~w~~l~~~~~p~~p~~  350 (412)
T 2vd5_A          273 DSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGR-GGAGDFRTHPFFFGLDWDGLRDSVPPFTPDF  350 (412)
T ss_dssp             SSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTT-TTHHHHHTSGGGTTCCSTTSTTSCCSCCCC-
T ss_pred             CCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCC-CCHHHHhcCCCcCCCCHHHHhhcCCCCCCcC
Confidence            98888888887543  33332 35789999999999999 99999631 1299999999999999999999999999987


Q ss_pred             CCcCCCCC
Q 025601          232 FNRELVSD  239 (250)
Q Consensus       232 ~~~~~~~~  239 (250)
                      .+....++
T Consensus       351 ~~~~d~~~  358 (412)
T 2vd5_A          351 EGATDTCN  358 (412)
T ss_dssp             ----CCSS
T ss_pred             CCcccccc
Confidence            55444443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-34  Score=242.59  Aligned_cols=144  Identities=22%  Similarity=0.334  Sum_probs=111.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       151 ~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------  188 (307)
T 3omv_A          151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS------------------------------------------  188 (307)
T ss_dssp             TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------------------------------------------
T ss_pred             CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc------------------------------------------
Confidence            68999999999999999999999999998654321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                               ......+||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+.+..
T Consensus       189 -------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~  243 (307)
T 3omv_A          189 -------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR  243 (307)
T ss_dssp             ------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred             -------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH
Confidence                                     011134799999999999753   4899999999999999999999999998877


Q ss_pred             HHHHHHHHhccCCCC----CCCCChHHHHHHHHhcccCccccCCCccChH--HHhcCCCC
Q 025601          159 LTLANIVARALEFPK----EPAVPATAKDLISQLLAKDPERRLGSTKGAS--AIKHHPFF  212 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~----~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~--~ll~hp~~  212 (250)
                      ..+..++......|.    ...++.++.+||.+||+.||++|||+.+.++  ++|+|++.
T Consensus       244 ~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          244 DQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            777777666544332    3568999999999999999999999555433  24566653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=3.3e-34  Score=265.93  Aligned_cols=161  Identities=36%  Similarity=0.765  Sum_probs=138.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++......                                            
T Consensus       461 ~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--------------------------------------------  496 (674)
T 3pfq_A          461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--------------------------------------------  496 (674)
T ss_dssp             TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT--------------------------------------------
T ss_pred             CCeEeccCChhhEEEcCCCcEEEeecceeeccccCC--------------------------------------------
Confidence            699999999999999999999999999986422111                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .....++||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+
T Consensus       497 -------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~  551 (674)
T 3pfq_A          497 -------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF  551 (674)
T ss_dssp             -------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHH
Confidence                                     0112357999999999999999999999999999999999999999999998899


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC-ccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS-TKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~-~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      ..|+.....+|.  .++.++.+||.+||++||++|+++ .+.++++++||||++++|..+  +++.||+.|...+
T Consensus       552 ~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~  624 (674)
T 3pfq_A          552 QSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG  624 (674)
T ss_dssp             HHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG
T ss_pred             HHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC
Confidence            888887666654  799999999999999999999995 234699999999999999987  5678999997754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-33  Score=243.02  Aligned_cols=162  Identities=38%  Similarity=0.794  Sum_probs=130.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++.......                                           
T Consensus       129 ~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~-------------------------------------------  165 (345)
T 3a8x_A          129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-------------------------------------------  165 (345)
T ss_dssp             TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC-------------------------------------------
T ss_pred             CCceecCCCHHHEEECCCCCEEEEeccccccccCCCC-------------------------------------------
Confidence            6999999999999999999999999999854321110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC------
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV------  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~------  155 (250)
                                                .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...      
T Consensus       166 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  219 (345)
T 3a8x_A          166 --------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP  219 (345)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----
T ss_pred             --------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc
Confidence                                      111347999999999999988999999999999999999999999752      


Q ss_pred             ---ChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc--cChHHHhcCCCCCCCCcccc--ccCCCCCC
Q 025601          156 ---DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST--KGASAIKHHPFFQGVNWALL--RCTTPPFV  228 (250)
Q Consensus       156 ---~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~--~~a~~ll~hp~~~~~~~~~~--~~~~~~~~  228 (250)
                         ........+......+|  ..++.++.+||.+||+.||++|+++.  ..+++++.||||++++|..+  +...||+.
T Consensus       220 ~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~~p~~  297 (345)
T 3a8x_A          220 DQNTEDYLFQVILEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFK  297 (345)
T ss_dssp             ---CHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred             ccccHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCCCCcC
Confidence               22334445555544444  47899999999999999999999953  23589999999999999987  45778888


Q ss_pred             CCCCCc
Q 025601          229 PPPFNR  234 (250)
Q Consensus       229 ~~~~~~  234 (250)
                      |...+.
T Consensus       298 p~~~~~  303 (345)
T 3a8x_A          298 PNISGE  303 (345)
T ss_dssp             CCCCTT
T ss_pred             CCCCCc
Confidence            876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.1e-34  Score=260.58  Aligned_cols=145  Identities=30%  Similarity=0.507  Sum_probs=125.8

Q ss_pred             ccceeecCCCCcEEeCCC--CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSD--GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~--~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|||||||||+|||++.+  +.+||+|||+++.......                                         
T Consensus       274 ~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~-----------------------------------------  312 (573)
T 3uto_A          274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-----------------------------------------  312 (573)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE-----------------------------------------
T ss_pred             CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc-----------------------------------------
Confidence            699999999999999854  8999999999966432211                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   ....+||+.|||||++.+..|+.++||||+||++|+|++|..||.+.+..+
T Consensus       313 -----------------------------~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~  363 (573)
T 3uto_A          313 -----------------------------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE  363 (573)
T ss_dssp             -----------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred             -----------------------------eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                                         012479999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          160 TLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      .+.+|......++..  ..++.++++||.+||++||++|||    +.++|+||||+..+|...
T Consensus       364 ~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l~Hpw~~~~~~~~~  422 (573)
T 3uto_A          364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAPGR  422 (573)
T ss_dssp             HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTSCCCCTTT
T ss_pred             HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcCcCCCCCCCc
Confidence            998888776655433  568999999999999999999999    999999999999888643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.7e-33  Score=253.19  Aligned_cols=161  Identities=34%  Similarity=0.712  Sum_probs=134.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.+|++||+|||+++.......                                           
T Consensus       308 ~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-------------------------------------------  344 (543)
T 3c4z_A          308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------------------------------------------  344 (543)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-------------------------------------------
T ss_pred             cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-------------------------------------------
Confidence            6999999999999999999999999999865332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----h
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----H  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----~  157 (250)
                                                ....++||+.|+|||++.+..++.++|||||||++|||++|..||.+..    .
T Consensus       345 --------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~  398 (543)
T 3c4z_A          345 --------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN  398 (543)
T ss_dssp             --------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH
T ss_pred             --------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH
Confidence                                      1113479999999999999889999999999999999999999998753    3


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCccccc--cCCCCCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLR--CTTPPFVPPPFN  233 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~  233 (250)
                      ......+......+|  ..++..+.+||.+||+.||++||++.+ .+++++.||||++++|..+.  ...||++|....
T Consensus       399 ~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~  475 (543)
T 3c4z_A          399 KELKQRVLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRT  475 (543)
T ss_dssp             HHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSS
T ss_pred             HHHHHHHhhcccCCC--cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCCCccc
Confidence            455555665554444  578999999999999999999998765 58999999999999999874  578999998754

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6.2e-34  Score=244.76  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=115.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       204 ~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~------------------------------------------  241 (353)
T 4ase_A          204 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------------------  241 (353)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------------------------------------------
T ss_pred             CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCc------------------------------------------
Confidence            68999999999999999999999999999654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               ......+||+.|||||++.+..|+.++|||||||++|||+| |..||.+....+.
T Consensus       242 -------------------------~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~  296 (353)
T 4ase_A          242 -------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  296 (353)
T ss_dssp             -------------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             -------------------------eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     01113468999999999999999999999999999999998 9999999876666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +.+++.....++.+..+++++.+||.+||+.||++|||    ++++++|
T Consensus       297 ~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt----~~eil~~  341 (353)
T 4ase_A          297 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  341 (353)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcC----HHHHHHH
Confidence            66667766667777789999999999999999999999    7777665

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.5e-33  Score=236.90  Aligned_cols=164  Identities=40%  Similarity=0.811  Sum_probs=131.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.......                                           
T Consensus       140 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  176 (327)
T 3a62_A          140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-------------------------------------------  176 (327)
T ss_dssp             TTCCCCCCCTTTEEECTTSCEEECCCSCC---------------------------------------------------
T ss_pred             CCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCc-------------------------------------------
Confidence            6899999999999999999999999998754221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+
T Consensus       177 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  230 (327)
T 3a62_A          177 --------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI  230 (327)
T ss_dssp             ----------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                      011246899999999999988999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNREL  236 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~  236 (250)
                      ..+......++  ..++.++.+||.+||+.||++||++. ..++++++||||++++|..+  ....||+.|..-..+.
T Consensus       231 ~~i~~~~~~~p--~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~  306 (327)
T 3a62_A          231 DKILKCKLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEED  306 (327)
T ss_dssp             HHHHHTCCCCC--TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCCCC------
T ss_pred             HHHHhCCCCCC--CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChhh
Confidence            88887665544  46899999999999999999999543 24999999999999999876  4567788877654433

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.98  E-value=5.9e-33  Score=236.72  Aligned_cols=135  Identities=20%  Similarity=0.338  Sum_probs=107.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.........                                         
T Consensus       177 ~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~-----------------------------------------  215 (329)
T 4aoj_A          177 LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR-----------------------------------------  215 (329)
T ss_dssp             TTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------------------
T ss_pred             CCeecccccHhhEEECCCCcEEEcccccceeccCCCcce-----------------------------------------
Confidence            689999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                .....+||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+..+.
T Consensus       216 --------------------------~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~  269 (329)
T 4aoj_A          216 --------------------------VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA  269 (329)
T ss_dssp             ------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH
T ss_pred             --------------------------ecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                      0112368999999999999999999999999999999998 8999999988888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      +..+..+ ...+.+..+++++.+||.+||+.||++|||    +++++.
T Consensus       270 ~~~i~~g-~~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~ei~~  312 (329)
T 4aoj_A          270 IDCITQG-RELERPRACPPEVYAIMRGCWQREPQQRHS----IKDVHA  312 (329)
T ss_dssp             HHHHHHT-CCCCCCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHH
T ss_pred             HHHHHcC-CCCCCcccccHHHHHHHHHHcCcChhHCcC----HHHHHH
Confidence            7777654 345666789999999999999999999999    555543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.98  E-value=4.4e-33  Score=235.44  Aligned_cols=137  Identities=22%  Similarity=0.283  Sum_probs=112.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       164 ~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~------------------------------------------  201 (308)
T 4gt4_A          164 HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY------------------------------------------  201 (308)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB------------------------------------------
T ss_pred             CCCCCCCccccceEECCCCCEEECCcccceeccCCCce------------------------------------------
Confidence            68999999999999999999999999998643211100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               ......+||+.|||||++.+..++.++|||||||++|||+| |..||.+.+..+.
T Consensus       202 -------------------------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~  256 (308)
T 4gt4_A          202 -------------------------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV  256 (308)
T ss_dssp             -------------------------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHH
T ss_pred             -------------------------eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     01112368999999999999999999999999999999998 8999999988877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      ...+.. ....+.+..+|.++.+||.+||+.||++||||.+.++.|
T Consensus       257 ~~~i~~-~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L  301 (308)
T 4gt4_A          257 VEMIRN-RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL  301 (308)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHc-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            766654 445566778999999999999999999999955544443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.98  E-value=4.1e-33  Score=234.71  Aligned_cols=133  Identities=20%  Similarity=0.326  Sum_probs=111.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       147 ~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------  184 (299)
T 4asz_A          147 QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY------------------------------------------  184 (299)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCE------------------------------------------
T ss_pred             CCcccCccCHhhEEECCCCcEEECCcccceecCCCCce------------------------------------------
Confidence            68999999999999999999999999998543221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..+.
T Consensus       185 -------------------------~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~  239 (299)
T 4asz_A          185 -------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV  239 (299)
T ss_dssp             -------------------------EETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             -------------------------eecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                     00112368999999999999999999999999999999998 8999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI  206 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l  206 (250)
                      +..+..+. ..+.+..+|.++.+||.+||+.||++|||    ++++
T Consensus       240 ~~~i~~~~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~~i  280 (299)
T 4asz_A          240 IECITQGR-VLQRPRTCPQEVYELMLGCWQREPHMRKN----IKGI  280 (299)
T ss_dssp             HHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHH
T ss_pred             HHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcC----HHHH
Confidence            87776654 34556689999999999999999999999    6666

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=233.87  Aligned_cols=156  Identities=28%  Similarity=0.619  Sum_probs=126.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|.+||+|||+++......                                            
T Consensus       134 ~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--------------------------------------------  169 (384)
T 4fr4_A          134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--------------------------------------------  169 (384)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC--------------------------------------------
T ss_pred             CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC--------------------------------------------
Confidence            699999999999999999999999999985432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCC--
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVD--  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~--  156 (250)
                                                ....++||+.|+|||++.+   ..++.++|||||||++|+|++|..||.+..  
T Consensus       170 --------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~  223 (384)
T 4fr4_A          170 --------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST  223 (384)
T ss_dssp             --------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS
T ss_pred             --------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc
Confidence                                      1113479999999999974   458999999999999999999999997543  


Q ss_pred             -hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCC
Q 025601          157 -HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPF  232 (250)
Q Consensus       157 -~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~  232 (250)
                       .......+......+  +..++..+.+||.+||+.||++||+.   +++++.||||++++|..+  ....||++|...
T Consensus       224 ~~~~~~~~~~~~~~~~--p~~~s~~~~~li~~lL~~dP~~R~s~---~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~  297 (384)
T 4fr4_A          224 SSKEIVHTFETTVVTY--PSAWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKG  297 (384)
T ss_dssp             CHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHSCSSGGGSCCS---HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCC
T ss_pred             cHHHHHHHHhhcccCC--CCcCCHHHHHHHHHHhcCCHhHhccc---HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCC
Confidence             334444444444333  44789999999999999999999973   789999999999999877  557789988753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=6.2e-32  Score=236.09  Aligned_cols=159  Identities=32%  Similarity=0.496  Sum_probs=130.2

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+|||++ .++.+||+|||+++......                                           
T Consensus       160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~-------------------------------------------  196 (394)
T 4e7w_A          160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-------------------------------------------  196 (394)
T ss_dssp             TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred             CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence            6999999999999998 78999999999985542211                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 .....++|+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+
T Consensus       197 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  249 (394)
T 4e7w_A          197 ---------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID  249 (394)
T ss_dssp             ---------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       011246889999999998754 8999999999999999999999999999888


Q ss_pred             HHHHHHHhccCC-----------------CC----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEF-----------------PK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~-----------------p~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+..+++..+..                 +.          ...++.++.+||.+||+.||++|||    +.+++.||||
T Consensus       250 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f  325 (394)
T 4e7w_A          250 QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIEALCHPFF  325 (394)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGG
T ss_pred             HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC----HHHHhcChhh
Confidence            887776643221                 11          1247889999999999999999999    9999999999


Q ss_pred             CCCCccccccCCCCCCCCCCCc
Q 025601          213 QGVNWALLRCTTPPFVPPPFNR  234 (250)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~  234 (250)
                      +++.|........+.+|+.++.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~  347 (394)
T 4e7w_A          326 DELRTGEARMPNGRELPPLFNW  347 (394)
T ss_dssp             STTTSSCCCCTTSSCCCCSCCC
T ss_pred             hhhccccccCCCCCCCCCcCCC
Confidence            9999987766666677777653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=3.2e-32  Score=247.19  Aligned_cols=160  Identities=38%  Similarity=0.671  Sum_probs=129.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|++||+|||+++......                                            
T Consensus       305 ~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--------------------------------------------  340 (576)
T 2acx_A          305 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--------------------------------------------  340 (576)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--------------------------------------------
T ss_pred             CCEeccCCchheEEEeCCCCeEEEecccceecccCc--------------------------------------------
Confidence            699999999999999999999999999985532210                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----h
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD----H  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~----~  157 (250)
                                                .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+..    .
T Consensus       341 --------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~  394 (576)
T 2acx_A          341 --------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR  394 (576)
T ss_dssp             --------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCH
T ss_pred             --------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhH
Confidence                                      0012369999999999999889999999999999999999999998754    2


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCccccc--cCCCCCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALLR--CTTPPFVPPPFN  233 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~  233 (250)
                      ......+......+  +..++.++.+||.+||+.||++|+++.. .++++++||||++++|..+.  ...||+.|.+..
T Consensus       395 ~~i~~~i~~~~~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~~  471 (576)
T 2acx_A          395 EEVERLVKEVPEEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQA  471 (576)
T ss_dssp             HHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC
T ss_pred             HHHHHHhhcccccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCccc
Confidence            33333343333333  3578999999999999999999995332 39999999999999999874  577899987743

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.2e-31  Score=233.52  Aligned_cols=164  Identities=27%  Similarity=0.368  Sum_probs=118.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++................       +                          
T Consensus       128 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~-------~--------------------------  174 (388)
T 3oz6_A          128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI-------N--------------------------  174 (388)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCC-------C--------------------------
T ss_pred             CCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccc-------c--------------------------
Confidence            6999999999999999999999999999976543211000000000       0                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                     ................+||+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+...+
T Consensus       175 ---------------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          175 ---------------ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             ------------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------ccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                           000000000011223579999999999987 5689999999999999999999999999998888


Q ss_pred             HHHHHHhccCCC---------------------------------------------CCCCCChHHHHHHHHhcccCccc
Q 025601          161 LANIVARALEFP---------------------------------------------KEPAVPATAKDLISQLLAKDPER  195 (250)
Q Consensus       161 ~~~i~~~~~~~p---------------------------------------------~~~~~~~~~~~ll~~~L~~dP~~  195 (250)
                      +..++.......                                             ....++.++.+||.+||+.||++
T Consensus       240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~  319 (388)
T 3oz6_A          240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK  319 (388)
T ss_dssp             HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence            877764332211                                             01257889999999999999999


Q ss_pred             cCCCccChHHHhcCCCCCCCCc
Q 025601          196 RLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       196 R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      |||    ++++|+||||.....
T Consensus       320 R~t----~~e~l~Hp~~~~~~~  337 (388)
T 3oz6_A          320 RIS----ANDALKHPFVSIFHN  337 (388)
T ss_dssp             SCC----HHHHTTSTTTTTTCC
T ss_pred             CCC----HHHHhCCHHHHHhcC
Confidence            999    999999999887543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=3.6e-31  Score=225.89  Aligned_cols=140  Identities=28%  Similarity=0.475  Sum_probs=120.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------  169 (328)
T 3fe3_A          133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-------------------------------------------  169 (328)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG-------------------------------------------
T ss_pred             CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc-------------------------------------------
Confidence            6999999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.+....
T Consensus       170 ---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  222 (328)
T 3fe3_A          170 ---------------------------LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL  222 (328)
T ss_dssp             ---------------------------GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------------------------cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       112468999999999998876 5899999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ...+..+....|.  .++.++.+||.+||+.||++|||    ++++++||||....+
T Consensus       223 ~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          223 RERVLRGKYRIPF--YMSTDCENLLKRFLVLNPIKRGT----LEQIMKDRWINAGHE  273 (328)
T ss_dssp             HHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTTTSCC----HHHHTTCTTTTTTCT
T ss_pred             HHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChhHCcC----HHHHhcCHhhcCCCc
Confidence            8888777665544  68999999999999999999999    999999999997543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=2.8e-31  Score=224.79  Aligned_cols=144  Identities=31%  Similarity=0.481  Sum_probs=116.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       138 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------  174 (311)
T 3niz_A          138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-------------------------------------------  174 (311)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-------------------------------------------
T ss_pred             CCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-------------------------------------------
Confidence            6999999999999999999999999999855432110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+ ..++.++||||+||++|+|++|..||.+....+.
T Consensus       175 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  228 (311)
T 3niz_A          175 --------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ  228 (311)
T ss_dssp             -----------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH
T ss_pred             --------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                      0011357999999999987 4589999999999999999999999998887777


Q ss_pred             HHHHHHhccCCCC----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPK----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+.........                            ...++.++.+||.+||+.||++|||    ++++|+||||
T Consensus       229 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f  304 (311)
T 3niz_A          229 LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNHPYF  304 (311)
T ss_dssp             HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGGG
T ss_pred             HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC----HHHHhcCccc
Confidence            7776653332111                            1246788999999999999999999    9999999999


Q ss_pred             CCCCcc
Q 025601          213 QGVNWA  218 (250)
Q Consensus       213 ~~~~~~  218 (250)
                      +++++.
T Consensus       305 ~~~~~~  310 (311)
T 3niz_A          305 KDLDPQ  310 (311)
T ss_dssp             TTSCTT
T ss_pred             ccCCcc
Confidence            998853

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=4.1e-31  Score=232.74  Aligned_cols=156  Identities=29%  Similarity=0.459  Sum_probs=122.6

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||+|||++.+ +.+||+|||+++......                                          
T Consensus       174 ~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------  211 (420)
T 1j1b_A          174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------  211 (420)
T ss_dssp             TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC------------------------------------------
T ss_pred             HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC------------------------------------------
Confidence            4799999999999999965 578999999986532210                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  .....++|+.|+|||++.+. .++.++|||||||++|||++|+.||.+....
T Consensus       212 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~  263 (420)
T 1j1b_A          212 ----------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  263 (420)
T ss_dssp             ----------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ----------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                        01124689999999999875 5899999999999999999999999999888


Q ss_pred             HHHHHHHHhccC-----------------CCC----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALE-----------------FPK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~-----------------~p~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +++.++++..+.                 ++.          ...++.++.+||.+||++||++||+    +.+++.|||
T Consensus       264 ~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t----~~e~l~hp~  339 (420)
T 1j1b_A          264 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSF  339 (420)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGG
T ss_pred             HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC----HHHHhCCHh
Confidence            888777663221                 111          1346889999999999999999999    999999999


Q ss_pred             CCCCCccccccCCCCCCCC
Q 025601          212 FQGVNWALLRCTTPPFVPP  230 (250)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~  230 (250)
                      |+++.+...........|.
T Consensus       340 f~~~~~~~~~~~~~~~~~~  358 (420)
T 1j1b_A          340 FDELRDPNVKLPNGRDTPA  358 (420)
T ss_dssp             GGGGGCTTCCCTTSCCCCC
T ss_pred             hcccccccccCCCCCCCCc
Confidence            9988776554333333333

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=5.7e-31  Score=222.12  Aligned_cols=141  Identities=30%  Similarity=0.452  Sum_probs=116.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------  175 (308)
T 3g33_A          139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-------------------------------------------  175 (308)
T ss_dssp             TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCC-------------------------------------------
T ss_pred             CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcc-------------------------------------------
Confidence            6899999999999999999999999999854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+
T Consensus       176 ---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  228 (308)
T 3g33_A          176 ---------------------------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL  228 (308)
T ss_dssp             ---------------------------SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHH
T ss_pred             ---------------------------cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                       01236899999999999988999999999999999999999999999988888


Q ss_pred             HHHHHhccCCCCC-------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALEFPKE-------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~~p~~-------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .++.......+..                         ..++..+.+||.+||+.||++|||    +.++|+||||++.+
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~h~~~~~~~  304 (308)
T 3g33_A          229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS----AFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSTTC----
T ss_pred             HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC----HHHHhcCccccCCC
Confidence            8877654332211                         357889999999999999999999    99999999999743

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=2.8e-31  Score=229.46  Aligned_cols=144  Identities=36%  Similarity=0.586  Sum_probs=123.1

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||+++.++    .+||+|||+++......                                        
T Consensus       134 ~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----------------------------------------  173 (361)
T 2yab_A          134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------------------------------  173 (361)
T ss_dssp             TTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----------------------------------------
T ss_pred             CCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----------------------------------------
Confidence            6999999999999998776    79999999985533210                                        


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                    .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       174 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~  223 (361)
T 2yab_A          174 ------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK  223 (361)
T ss_dssp             ------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             ------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence                                          01124689999999999998899999999999999999999999999988


Q ss_pred             HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          158 ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .+.+..+......++..  ..++..+.+||.+||..||++|||    ++++++||||.+++|..
T Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~  283 (361)
T 2yab_A          224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDTQQ  283 (361)
T ss_dssp             HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTSCSSHHH
T ss_pred             HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhcCcCcCCCchhh
Confidence            88888887766554432  468999999999999999999999    99999999999998853

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=5.3e-31  Score=234.25  Aligned_cols=177  Identities=26%  Similarity=0.359  Sum_probs=113.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.................                ..         ......
T Consensus       175 ~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~----------------~~---------~~~~~~  229 (458)
T 3rp9_A          175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR----------------ED---------DMNLVT  229 (458)
T ss_dssp             TTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-------------------------------------
T ss_pred             CCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcc----------------cc---------cccccc
Confidence            69999999999999999999999999999765432211000000000                00         000000


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-CCCCCchhHHHHHHHHHHHHHh-----------CC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFY-----------GV  149 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~vl~ellt-----------g~  149 (250)
                      ..                 ............+||+.|+|||++. +..++.++|||||||++|||++           |.
T Consensus       230 ~~-----------------~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~  292 (458)
T 3rp9_A          230 FP-----------------HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG  292 (458)
T ss_dssp             --------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCC
T ss_pred             cc-----------------ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccccccc
Confidence            00                 0000001122457899999999875 4569999999999999999998           77


Q ss_pred             CCCCCCCh--------------------HHHHHHHHHhccCCC-----------------------------CCCCCChH
Q 025601          150 TPFRGVDH--------------------ELTLANIVARALEFP-----------------------------KEPAVPAT  180 (250)
Q Consensus       150 ~pf~~~~~--------------------~~~~~~i~~~~~~~p-----------------------------~~~~~~~~  180 (250)
                      .+|.+...                    ..++..|.+..+..+                             ....++.+
T Consensus       293 p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  372 (458)
T 3rp9_A          293 PLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSAD  372 (458)
T ss_dssp             CSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHH
T ss_pred             ccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHH
Confidence            77876541                    233333333221111                             01346899


Q ss_pred             HHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCC
Q 025601          181 AKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTT  224 (250)
Q Consensus       181 ~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~  224 (250)
                      +.+||.+||++||++|+|    ++++|+||||++++|.......
T Consensus       373 ~~dLl~~mL~~dP~~R~t----~~e~L~Hp~f~~~~~~~~e~~~  412 (458)
T 3rp9_A          373 AIHLLKRMLVFNPNKRIT----INECLAHPFFKEVRIAEVETNA  412 (458)
T ss_dssp             HHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTCCGGGCCCC
T ss_pred             HHHHHHHHhccCccccCC----HHHHhcCHhhhhcCCCccCCCC
Confidence            999999999999999999    9999999999999998775543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=7.7e-31  Score=226.06  Aligned_cols=161  Identities=45%  Similarity=0.810  Sum_probs=121.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       178 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------  215 (355)
T 1vzo_A          178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE------------------------------------------  215 (355)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG------------------------------------------
T ss_pred             CCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCC------------------------------------------
Confidence            68999999999999999999999999998554321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCC---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE--GHGSPVDWWTLGIFLFELFYGVTPFRGVD---  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~vl~elltg~~pf~~~~---  156 (250)
                                                ....++||+.|+|||++.+.  .++.++|||||||++|+|++|..||....   
T Consensus       216 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~  269 (355)
T 1vzo_A          216 --------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN  269 (355)
T ss_dssp             --------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC
T ss_pred             --------------------------cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc
Confidence                                      01124689999999999863  37899999999999999999999997543   


Q ss_pred             -hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccccc--CCCCCCCCCC
Q 025601          157 -HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALLRC--TTPPFVPPPF  232 (250)
Q Consensus       157 -~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~~~--~~~~~~~~~~  232 (250)
                       .......+.....  +.+..++..+.+||.+||..||++||++. +.++++++||||+.++|..+..  .++|+.|...
T Consensus       270 ~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~  347 (355)
T 1vzo_A          270 SQAEISRRILKSEP--PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIR  347 (355)
T ss_dssp             CHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             hHHHHHHHHhccCC--CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCCCCCCCccc
Confidence             2333334443333  34457899999999999999999999322 1399999999999999987744  4455555543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.4e-30  Score=220.92  Aligned_cols=147  Identities=29%  Similarity=0.405  Sum_probs=117.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       127 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  163 (317)
T 2pmi_A          127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-------------------------------------------  163 (317)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-------------------------------------------
T ss_pred             CCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-------------------------------------------
Confidence            6899999999999999999999999999854321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.
T Consensus       164 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  217 (317)
T 2pmi_A          164 --------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ  217 (317)
T ss_dssp             --------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                      00123689999999999874 589999999999999999999999999988888


Q ss_pred             HHHHHHhccCCC--------------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFP--------------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p--------------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      +..+....+..+                                ....++.++.+||.+||+.||++|||    ++++|+
T Consensus       218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~  293 (317)
T 2pmi_A          218 LKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AKQALH  293 (317)
T ss_dssp             HHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HHHHTT
T ss_pred             HHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC----HHHHhC
Confidence            777765432211                                01257889999999999999999999    999999


Q ss_pred             CCCCCCCCccccc
Q 025601          209 HPFFQGVNWALLR  221 (250)
Q Consensus       209 hp~~~~~~~~~~~  221 (250)
                      ||||.+..|....
T Consensus       294 hp~f~~~~~~~~~  306 (317)
T 2pmi_A          294 HPWFAEYYHHASM  306 (317)
T ss_dssp             SGGGGGGCC----
T ss_pred             Chhhhcccchhhc
Confidence            9999998776443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=1.4e-30  Score=221.80  Aligned_cols=147  Identities=35%  Similarity=0.548  Sum_probs=122.5

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.   ++.+||+|||+++.......                                        
T Consensus       150 ~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~----------------------------------------  189 (327)
T 3lm5_A          150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----------------------------------------  189 (327)
T ss_dssp             TTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------------------------------------------
T ss_pred             CCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc----------------------------------------
Confidence            68999999999999987   78999999999855432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       190 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  239 (327)
T 3lm5_A          190 ------------------------------LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ  239 (327)
T ss_dssp             ----------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Confidence                                          01236899999999999988999999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~  222 (250)
                      .....+.......+..  ..++..+.+||.+||+.||++|||    ++++|+||||++.+|..+..
T Consensus       240 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~ll~h~~~~~~~~~~~~~  301 (327)
T 3lm5_A          240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT----AEICLSHSWLQQWDFENLFH  301 (327)
T ss_dssp             HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCGGGCCCCTTCC--
T ss_pred             HHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhCCHhhcccccccccC
Confidence            8877777655544333  568999999999999999999999    99999999999999987754

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=8e-31  Score=220.57  Aligned_cols=142  Identities=29%  Similarity=0.504  Sum_probs=119.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       135 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  171 (297)
T 3fxz_A          135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-------------------------------------------  171 (297)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-------------------------------------------
T ss_pred             CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-------------------------------------------
Confidence            6899999999999999999999999998854332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       172 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  225 (297)
T 3fxz_A          172 --------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (297)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             --------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      011246899999999999999999999999999999999999999988877776


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+..... ....+..++..+.+||.+||+.||++|||    ++++++||||+...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~h~~~~~~~  277 (297)
T 3fxz_A          226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHQFLKIAK  277 (297)
T ss_dssp             HHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGCC
T ss_pred             HHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhcccC
Confidence            66655433 33445578999999999999999999999    99999999999753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.3e-30  Score=224.23  Aligned_cols=155  Identities=29%  Similarity=0.441  Sum_probs=123.1

Q ss_pred             CccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||+|||++. ++.+||+|||+++.......                                         
T Consensus       149 ~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~-----------------------------------------  187 (360)
T 3e3p_A          149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP-----------------------------------------  187 (360)
T ss_dssp             TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC-----------------------------------------
T ss_pred             CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC-----------------------------------------
Confidence            369999999999999996 89999999999865432110                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+....
T Consensus       188 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~  238 (360)
T 3e3p_A          188 -----------------------------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA  238 (360)
T ss_dssp             -----------------------------CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -----------------------------cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH
Confidence                                         01236889999999997755 899999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCC------------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          159 LTLANIVARALEFP------------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       159 ~~~~~i~~~~~~~p------------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ..+..++......+                              ....++.++.+||.+||+.||++|||    +.++|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~  314 (360)
T 3e3p_A          239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK----PYEALC  314 (360)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCC----HHHHTT
T ss_pred             HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCC----HHHHhc
Confidence            88777765322211                              11225678999999999999999999    999999


Q ss_pred             CCCCCCCCccccccCCCCCCC
Q 025601          209 HPFFQGVNWALLRCTTPPFVP  229 (250)
Q Consensus       209 hp~~~~~~~~~~~~~~~~~~~  229 (250)
                      ||||+++.+........+.+|
T Consensus       315 hp~f~~~~~~~~~~~~~~~~~  335 (360)
T 3e3p_A          315 HPYFDELHDPATKLPNNKDLP  335 (360)
T ss_dssp             SGGGGGGGCTTCCCTTSCCCC
T ss_pred             CccccccCCccccCCCCCCCC
Confidence            999999877655544444444

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.7e-30  Score=221.14  Aligned_cols=148  Identities=26%  Similarity=0.414  Sum_probs=116.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       119 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------  155 (324)
T 3mtl_A          119 QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-------------------------------------------  155 (324)
T ss_dssp             TTEEESSCCGGGEEECTTCCEEECSSSEEECC------------------------------------------------
T ss_pred             CCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-------------------------------------------
Confidence            6999999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+.
T Consensus       156 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  209 (324)
T 3mtl_A          156 --------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ  209 (324)
T ss_dssp             ---------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                      0012357899999999987 4589999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCC----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          161 LANIVARALEFPK----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       161 ~~~i~~~~~~~p~----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      +..+....+..+.                            ...++.++.+||.+||+.||++|||    ++++|+||||
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f  285 (324)
T 3mtl_A          210 LHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFF  285 (324)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGG
T ss_pred             HHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC----HHHHhcChhh
Confidence            7777664332211                            1246788999999999999999999    9999999999


Q ss_pred             CCCCcccccc
Q 025601          213 QGVNWALLRC  222 (250)
Q Consensus       213 ~~~~~~~~~~  222 (250)
                      .++.......
T Consensus       286 ~~~~~~~~~~  295 (324)
T 3mtl_A          286 LSLGERIHKL  295 (324)
T ss_dssp             GGGCSTTSSS
T ss_pred             hhcccccccC
Confidence            9977544333

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=4.8e-31  Score=235.06  Aligned_cols=140  Identities=29%  Similarity=0.457  Sum_probs=112.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++......                                            
T Consensus       183 ~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--------------------------------------------  218 (464)
T 3ttj_A          183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------  218 (464)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--------------------------------------------
T ss_pred             CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--------------------------------------------
Confidence            699999999999999999999999999985432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                .....+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..+++
T Consensus       219 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~  272 (464)
T 3ttj_A          219 --------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW  272 (464)
T ss_dssp             --------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      011247899999999999999999999999999999999999999999988888


Q ss_pred             HHHHHhccCCCC-------------------CCC---------------------CChHHHHHHHHhcccCccccCCCcc
Q 025601          162 ANIVARALEFPK-------------------EPA---------------------VPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       162 ~~i~~~~~~~p~-------------------~~~---------------------~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ..+++..+....                   ...                     .+.++.+||.+||++||++|||   
T Consensus       273 ~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t---  349 (464)
T 3ttj_A          273 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS---  349 (464)
T ss_dssp             HHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC---
T ss_pred             HHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCC---
Confidence            887765432110                   000                     0456899999999999999999   


Q ss_pred             ChHHHhcCCCCCCC
Q 025601          202 GASAIKHHPFFQGV  215 (250)
Q Consensus       202 ~a~~ll~hp~~~~~  215 (250)
                       ++++|+||||...
T Consensus       350 -a~e~L~Hp~~~~~  362 (464)
T 3ttj_A          350 -VDDALQHPYINVW  362 (464)
T ss_dssp             -HHHHHTSTTTGGG
T ss_pred             -HHHHhcChhhhhc
Confidence             9999999999853

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.9e-30  Score=223.51  Aligned_cols=142  Identities=31%  Similarity=0.491  Sum_probs=117.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.....                                             
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~---------------------------------------------  181 (367)
T 1cm8_A          147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---------------------------------------------  181 (367)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred             CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence            69999999999999999999999999998542211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....++|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+...+
T Consensus       182 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  234 (367)
T 1cm8_A          182 ---------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ  234 (367)
T ss_dssp             ---------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       012368999999999988 5689999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+++..+..+.                             ...++..+.+||.+||+.||++|||    ++++|+|||
T Consensus       235 l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t----~~e~l~hp~  310 (367)
T 1cm8_A          235 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPY  310 (367)
T ss_dssp             HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGG
T ss_pred             HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC----HHHHhcChH
Confidence            7777654333211                             1356899999999999999999999    999999999


Q ss_pred             CCCCCccc
Q 025601          212 FQGVNWAL  219 (250)
Q Consensus       212 ~~~~~~~~  219 (250)
                      |++..+..
T Consensus       311 f~~~~~~~  318 (367)
T 1cm8_A          311 FESLHDTE  318 (367)
T ss_dssp             GTTTC---
T ss_pred             HHhhcCCc
Confidence            99877544

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.1e-30  Score=222.79  Aligned_cols=144  Identities=24%  Similarity=0.337  Sum_probs=113.1

Q ss_pred             ccceeecCCCCcEEeC-----CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            2 LGIVYRDLKPENVLVR-----SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-----~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +||+||||||+|||++     ..+.+||+|||+++.......                                      
T Consensus       151 ~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~--------------------------------------  192 (329)
T 3gbz_A          151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR--------------------------------------  192 (329)
T ss_dssp             TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------------------------------------
T ss_pred             CCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc--------------------------------------
Confidence            6899999999999995     445699999998754321100                                      


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                     ......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus       193 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  241 (329)
T 3gbz_A          193 -------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD  241 (329)
T ss_dssp             --------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence                                           001235789999999998754 899999999999999999999999999


Q ss_pred             ChHHHHHHHHHhccCCCCC----------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          156 DHELTLANIVARALEFPKE----------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~----------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.+.++.......+..                            ..++.++.+||.+||+.||++|||    ++++|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l  317 (329)
T 3gbz_A          242 SEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS----AKNAL  317 (329)
T ss_dssp             SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             CHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC----HHHHh
Confidence            8888888877653322111                            116788999999999999999999    99999


Q ss_pred             cCCCCCCCCcc
Q 025601          208 HHPFFQGVNWA  218 (250)
Q Consensus       208 ~hp~~~~~~~~  218 (250)
                      +||||++.+|+
T Consensus       318 ~hp~f~~~~~~  328 (329)
T 3gbz_A          318 EHPYFSHNDFD  328 (329)
T ss_dssp             TSGGGSSSCSC
T ss_pred             CCcccCCCCCC
Confidence            99999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=2.2e-30  Score=228.78  Aligned_cols=181  Identities=23%  Similarity=0.347  Sum_probs=115.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++..................       .     ...                
T Consensus       148 ~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~-------~-----~~~----------------  199 (432)
T 3n9x_A          148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE-------E-----PGP----------------  199 (432)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred             CCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccc-------c-----ccc----------------
Confidence            699999999999999999999999999997654332111000000000       0     000                


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-CCCCCchhHHHHHHHHHHHHHh-----------CC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-GEGHGSPVDWWTLGIFLFELFY-----------GV  149 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~vl~ellt-----------g~  149 (250)
                                         ............+||+.|+|||++. +..++.++||||+||++|||++           |.
T Consensus       200 -------------------~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~  260 (432)
T 3n9x_A          200 -------------------HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF  260 (432)
T ss_dssp             ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCC
T ss_pred             -------------------cccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccc
Confidence                               0000001122457999999999875 4558999999999999999998           44


Q ss_pred             CCCCCCC-----------------hHHHHHHHHHhccCCCC-----------------------------CCCCChHHHH
Q 025601          150 TPFRGVD-----------------HELTLANIVARALEFPK-----------------------------EPAVPATAKD  183 (250)
Q Consensus       150 ~pf~~~~-----------------~~~~~~~i~~~~~~~p~-----------------------------~~~~~~~~~~  183 (250)
                      .+|.+.+                 ...++..+.+..+..+.                             ...+++++.+
T Consensus       261 p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  340 (432)
T 3n9x_A          261 PLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN  340 (432)
T ss_dssp             CSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             ccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHH
Confidence            5555543                 12333333332222110                             0357899999


Q ss_pred             HHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCC
Q 025601          184 LISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN  233 (250)
Q Consensus       184 ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~  233 (250)
                      ||.+||++||++|||    ++++|+||||++++|.........-+..+|.
T Consensus       341 Ll~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~e~~~~~~~~~~~~  386 (432)
T 3n9x_A          341 LLESMLKFNPNKRIT----IDQALDHPYLKDVRKKKLENFSTKKIILPFD  386 (432)
T ss_dssp             HHHHHSCSSTTTSCC----HHHHHTCGGGTTTCCTTTC---CCCCCCSSC
T ss_pred             HHHHHhcCCcccCCC----HHHHhcChhhhhccCcccCcCCCCCCCCChh
Confidence            999999999999999    9999999999999998765443333334443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=1.2e-30  Score=218.20  Aligned_cols=142  Identities=26%  Similarity=0.435  Sum_probs=112.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       119 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  155 (288)
T 1ob3_A          119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-------------------------------------------  155 (288)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-------------------------------------------
Confidence            6999999999999999999999999998744321100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.
T Consensus       156 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  209 (288)
T 1ob3_A          156 --------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ  209 (288)
T ss_dssp             --------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                      00112578999999999875 489999999999999999999999999888877


Q ss_pred             HHHHHHhccCCC---------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          161 LANIVARALEFP---------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p---------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      +.++........                           ....++.++.+||.+||+.||++|||    ++++++||||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~  285 (288)
T 1ob3_A          210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFK  285 (288)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGG
T ss_pred             HHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcchh
Confidence            777765322111                           01347889999999999999999999    99999999998


Q ss_pred             CCC
Q 025601          214 GVN  216 (250)
Q Consensus       214 ~~~  216 (250)
                      +.+
T Consensus       286 ~~n  288 (288)
T 1ob3_A          286 ENN  288 (288)
T ss_dssp             C--
T ss_pred             hcC
Confidence            753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.6e-30  Score=218.37  Aligned_cols=139  Identities=37%  Similarity=0.652  Sum_probs=117.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       156 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  192 (298)
T 2zv2_A          156 QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-------------------------------------------  192 (298)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-------------------------------------------
T ss_pred             CCeeccCCCHHHEEECCCCCEEEecCCCccccccccc-------------------------------------------
Confidence            6899999999999999999999999999855332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                ......||+.|+|||++.+..   ++.++|||||||++|+|++|..||.+....
T Consensus       193 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  246 (298)
T 2zv2_A          193 --------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM  246 (298)
T ss_dssp             --------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             --------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH
Confidence                                      001236899999999998765   378899999999999999999999988877


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .....+......++....++..+.+||.+||+.||++||+    +.++++||||.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s----~~e~l~hp~~~  297 (298)
T 2zv2_A          247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTCHHHH
T ss_pred             HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC----HHHHhcCcccc
Confidence            7777777766667766789999999999999999999999    99999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.5e-30  Score=220.38  Aligned_cols=144  Identities=37%  Similarity=0.579  Sum_probs=121.5

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||+++.++    .+||+|||+++.......                                       
T Consensus       133 ~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------  173 (326)
T 2y0a_A          133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---------------------------------------  173 (326)
T ss_dssp             TTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSC---------------------------------------
T ss_pred             CCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCc---------------------------------------
Confidence            6899999999999998877    799999999855432110                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                     .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       174 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  222 (326)
T 2y0a_A          174 -------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK  222 (326)
T ss_dssp             -------------------------------CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             -------------------------------cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence                                           0123689999999999988899999999999999999999999999888


Q ss_pred             HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          158 ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .+.+..+......++..  ..++..+.+||.+||+.||++|||    ++++|+||||++.+|..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~~  282 (326)
T 2y0a_A          223 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQ  282 (326)
T ss_dssp             HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTSCCSHHH
T ss_pred             HHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCccCCcchh
Confidence            88887777655544322  468999999999999999999999    99999999999988753

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=4.3e-30  Score=227.65  Aligned_cols=141  Identities=35%  Similarity=0.671  Sum_probs=120.6

Q ss_pred             ccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++   .++.+||+|||++........                                        
T Consensus       129 ~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~----------------------------------------  168 (444)
T 3soa_A          129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ----------------------------------------  168 (444)
T ss_dssp             TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC----------------------------------------
T ss_pred             CCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc----------------------------------------
Confidence            6999999999999998   457899999999855432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..
T Consensus       169 -----------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~  219 (444)
T 3soa_A          169 -----------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH  219 (444)
T ss_dssp             -----------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -----------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence                                         011246899999999999988999999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      .....+..+...++.+  ..++.++.+||.+||+.||++|||    +.++|+||||.+.
T Consensus       220 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~e~L~hp~~~~~  274 (444)
T 3soa_A          220 RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWISHR  274 (444)
T ss_dssp             HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSCTTHHH
T ss_pred             HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCC----HHHHhcCccccCC
Confidence            8888888877665544  468999999999999999999999    9999999999753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=2.7e-30  Score=223.75  Aligned_cols=142  Identities=31%  Similarity=0.422  Sum_probs=110.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.....                                             
T Consensus       151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~---------------------------------------------  185 (367)
T 2fst_X          151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---------------------------------------------  185 (367)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred             CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence            69999999999999999999999999988542210                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....++|+.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+...+
T Consensus       186 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  238 (367)
T 2fst_X          186 ---------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ  238 (367)
T ss_dssp             --------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       012368999999999987 5689999999999999999999999999988887


Q ss_pred             HHHHHHhccCCC-----------------------C------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFP-----------------------K------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p-----------------------~------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+....+..+                       .      ...++..+.+||.+||+.||++|||    ++++|.|||
T Consensus       239 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t----~~e~L~hp~  314 (367)
T 2fst_X          239 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHAY  314 (367)
T ss_dssp             HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGG
T ss_pred             HHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcC----HHHHhcChh
Confidence            777765432211                       0      0246788999999999999999999    999999999


Q ss_pred             CCCCCccc
Q 025601          212 FQGVNWAL  219 (250)
Q Consensus       212 ~~~~~~~~  219 (250)
                      |.+.....
T Consensus       315 ~~~~~~~~  322 (367)
T 2fst_X          315 FAQYHDPD  322 (367)
T ss_dssp             GTTTCCGG
T ss_pred             hhhccCCC
Confidence            99876544

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.4e-30  Score=219.85  Aligned_cols=148  Identities=29%  Similarity=0.367  Sum_probs=120.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       131 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------------  167 (346)
T 1ua2_A          131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-------------------------------------------  167 (346)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-------------------------------------------
T ss_pred             CCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc-------------------------------------------
Confidence            6899999999999999999999999999855322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.+....+.
T Consensus       168 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~  221 (346)
T 1ua2_A          168 --------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ  221 (346)
T ss_dssp             --------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             --------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                                      001236899999999997654 89999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCC--------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKE--------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~--------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.++..........                          ..++.++.+||.+||+.||++|||    ++++|+||||.+
T Consensus       222 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~h~~f~~  297 (346)
T 1ua2_A          222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYFSN  297 (346)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGGTS
T ss_pred             HHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC----HHHHhcChhhhc
Confidence            88877653321110                          345789999999999999999999    999999999999


Q ss_pred             CCcccccc
Q 025601          215 VNWALLRC  222 (250)
Q Consensus       215 ~~~~~~~~  222 (250)
                      ..+.....
T Consensus       298 ~~~~~~~~  305 (346)
T 1ua2_A          298 RPGPTPGC  305 (346)
T ss_dssp             SSCCCCSS
T ss_pred             CCCCCCcc
Confidence            87765544

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.96  E-value=3.4e-30  Score=215.76  Aligned_cols=141  Identities=28%  Similarity=0.462  Sum_probs=112.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       120 ~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  156 (292)
T 3o0g_A          120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-------------------------------------------  156 (292)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-------------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-------------------------------------------
Confidence            6999999999999999999999999999854321110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCC-CCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTP-FRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~p-f~~~~~~~  159 (250)
                                                ......+|+.|+|||++.+.. ++.++||||+||++|+|++|..| |.+.....
T Consensus       157 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~  210 (292)
T 3o0g_A          157 --------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD  210 (292)
T ss_dssp             --------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH
T ss_pred             --------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH
Confidence                                      001236889999999998876 79999999999999999988877 55666666


Q ss_pred             HHHHHHHhccCCCC---------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFPK---------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p~---------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+..+.........                           ...++..+.+||.+||+.||++|||    ++++|+||||
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f  286 (292)
T 3o0g_A          211 QLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF  286 (292)
T ss_dssp             HHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGG
T ss_pred             HHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC----HHHHhcCccc
Confidence            66666553322111                           1247889999999999999999999    9999999999


Q ss_pred             CCC
Q 025601          213 QGV  215 (250)
Q Consensus       213 ~~~  215 (250)
                      +++
T Consensus       287 ~~~  289 (292)
T 3o0g_A          287 SDF  289 (292)
T ss_dssp             TTC
T ss_pred             ccC
Confidence            974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=4.4e-30  Score=224.91  Aligned_cols=152  Identities=22%  Similarity=0.299  Sum_probs=112.1

Q ss_pred             ccceeecCCCCcEEe----CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLV----RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+|||+    +.++.+||+|||+++.........                                     
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-------------------------------------  189 (405)
T 3rgf_A          147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-------------------------------------  189 (405)
T ss_dssp             TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------------------------
T ss_pred             CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCccc-------------------------------------
Confidence            689999999999999    667899999999986543211000                                     


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                   ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+..
T Consensus       190 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          190 -----------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             ------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             -----------------------------ccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence                                         0011246899999999998854 8999999999999999999999997665


Q ss_pred             h---------HHHHHHHHHhccCCCCC------------------------------------CCCChHHHHHHHHhccc
Q 025601          157 H---------ELTLANIVARALEFPKE------------------------------------PAVPATAKDLISQLLAK  191 (250)
Q Consensus       157 ~---------~~~~~~i~~~~~~~p~~------------------------------------~~~~~~~~~ll~~~L~~  191 (250)
                      .         .+++..+....+..+..                                    ...+..+.+||.+||+.
T Consensus       241 ~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~  320 (405)
T 3rgf_A          241 EDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTM  320 (405)
T ss_dssp             ------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCS
T ss_pred             ccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccC
Confidence            3         35555555443322111                                    11267889999999999


Q ss_pred             CccccCCCccChHHHhcCCCCCCCCccccccC
Q 025601          192 DPERRLGSTKGASAIKHHPFFQGVNWALLRCT  223 (250)
Q Consensus       192 dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~  223 (250)
                      ||++|||    ++++|+||||.+..+......
T Consensus       321 dP~~R~t----a~e~L~hp~f~~~~~~~~~~~  348 (405)
T 3rgf_A          321 DPIKRIT----SEQAMQDPYFLEDPLPTSDVF  348 (405)
T ss_dssp             SGGGSCC----HHHHHTSGGGTSSSCCCSSTT
T ss_pred             CcccCCC----HHHHhcChhhccCCCCccccc
Confidence            9999999    999999999999887655443

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=4.2e-30  Score=226.86  Aligned_cols=138  Identities=29%  Similarity=0.451  Sum_probs=113.2

Q ss_pred             ccceeecCCCCcEEeCCCCC--eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGH--IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~--~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|||||||||+|||++.++.  +||+|||++......                                           
T Consensus       219 ~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~-------------------------------------------  255 (429)
T 3kvw_A          219 NRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-------------------------------------------  255 (429)
T ss_dssp             HTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC-------------------------------------------
T ss_pred             CCeecCCCCHHHeEEccCCCcceEEeecccceecCCc-------------------------------------------
Confidence            58999999999999999887  999999987432211                                           


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       256 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~  306 (429)
T 3kvw_A          256 -----------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD  306 (429)
T ss_dssp             -----------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -----------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence                                         112368999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHhccCCCC---------------------------------------------------------CCCCChHHH
Q 025601          160 TLANIVARALEFPK---------------------------------------------------------EPAVPATAK  182 (250)
Q Consensus       160 ~~~~i~~~~~~~p~---------------------------------------------------------~~~~~~~~~  182 (250)
                      .+..++......+.                                                         ....++.+.
T Consensus       307 ~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  386 (429)
T 3kvw_A          307 QLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL  386 (429)
T ss_dssp             HHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHH
T ss_pred             HHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHH
Confidence            88777654322110                                                         012367899


Q ss_pred             HHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          183 DLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       183 ~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +||.+||++||++|||    ++++|+||||+..
T Consensus       387 dli~~~L~~dP~~Rpt----a~e~L~Hpw~~~~  415 (429)
T 3kvw_A          387 DFLKQCLEWDPAVRMT----PGQALRHPWLRRR  415 (429)
T ss_dssp             HHHHHHTCSSTTTSCC----HHHHHTSTTTC--
T ss_pred             HHHHHHCCCChhhCCC----HHHHhCChhhccC
Confidence            9999999999999999    9999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=2.6e-30  Score=224.79  Aligned_cols=140  Identities=29%  Similarity=0.445  Sum_probs=111.7

Q ss_pred             ccceeecCCCCcEEeC--CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVR--SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~--~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      .|||||||||+|||++  .++.+||+|||+++.....                                           
T Consensus       178 ~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~-------------------------------------------  214 (382)
T 2vx3_A          178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-------------------------------------------  214 (382)
T ss_dssp             TCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC-------------------------------------------
T ss_pred             CCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc-------------------------------------------
Confidence            5899999999999995  4678999999998543211                                           


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+
T Consensus       215 -----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  265 (382)
T 2vx3_A          215 -----------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD  265 (382)
T ss_dssp             -----------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -----------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                         012368899999999999899999999999999999999999999998888


Q ss_pred             HHHHHHHhccCCCCC----------------------------------C------------------------C----C
Q 025601          160 TLANIVARALEFPKE----------------------------------P------------------------A----V  177 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~----------------------------------~------------------------~----~  177 (250)
                      .+..++......+..                                  .                        .    .
T Consensus       266 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  345 (382)
T 2vx3_A          266 QMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVAD  345 (382)
T ss_dssp             HHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHH
T ss_pred             HHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchh
Confidence            887777643321100                                  0                        0    0


Q ss_pred             ChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          178 PATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       178 ~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      ..++.+||.+||+.||++|||    ++++|+||||++..+
T Consensus       346 ~~~~~dli~~mL~~dP~~Rpt----a~e~L~hp~f~~~~~  381 (382)
T 2vx3_A          346 YLKFKDLILRMLDYDPKTRIQ----PYYALQHSFFKKTAD  381 (382)
T ss_dssp             HHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGGCC---
T ss_pred             hHHHHHHHHHhcCCChhhCCC----HHHHhcCcccccCCC
Confidence            036899999999999999999    999999999998654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=4e-30  Score=223.65  Aligned_cols=143  Identities=31%  Similarity=0.504  Sum_probs=118.0

Q ss_pred             CccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++||+||||||+||+++ .++.+||+|||+++.......                                         
T Consensus       159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-----------------------------------------  197 (383)
T 3eb0_A          159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-----------------------------------------  197 (383)
T ss_dssp             TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-----------------------------------------
T ss_pred             HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-----------------------------------------
Confidence            47999999999999997 588999999999865432110                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   .....+|+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+....
T Consensus       198 -----------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  248 (383)
T 3eb0_A          198 -----------------------------SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI  248 (383)
T ss_dssp             -----------------------------CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -----------------------------CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH
Confidence                                         11236789999999998765 899999999999999999999999999988


Q ss_pred             HHHHHHHHhccCC-----------------C----------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALEF-----------------P----------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~~-----------------p----------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +.+.+++...+..                 +          .+..++.++.+||.+||+.||++|||    +.++|+|||
T Consensus       249 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~  324 (383)
T 3eb0_A          249 DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN----PYEAMAHPF  324 (383)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGG
T ss_pred             HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCHH
Confidence            8888877643321                 1          12357889999999999999999999    999999999


Q ss_pred             CCCCCc
Q 025601          212 FQGVNW  217 (250)
Q Consensus       212 ~~~~~~  217 (250)
                      |+++.+
T Consensus       325 f~~~~~  330 (383)
T 3eb0_A          325 FDHLRN  330 (383)
T ss_dssp             GHHHHH
T ss_pred             HHHHHh
Confidence            998654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=1.4e-30  Score=225.65  Aligned_cols=156  Identities=29%  Similarity=0.453  Sum_probs=116.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++......                                            
T Consensus       146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------  181 (371)
T 2xrw_A          146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------  181 (371)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred             CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence            699999999999999999999999999985432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+
T Consensus       182 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  235 (371)
T 2xrw_A          182 --------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW  235 (371)
T ss_dssp             ----------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      001236899999999999988999999999999999999999999998888777


Q ss_pred             HHHHHhccCCC-------------------CCC---------------------CCChHHHHHHHHhcccCccccCCCcc
Q 025601          162 ANIVARALEFP-------------------KEP---------------------AVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       162 ~~i~~~~~~~p-------------------~~~---------------------~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ..++...+...                   ...                     ..+.++.+||.+||+.||++|||   
T Consensus       236 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t---  312 (371)
T 2xrw_A          236 NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS---  312 (371)
T ss_dssp             HHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCC---
T ss_pred             HHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCC---
Confidence            77665332110                   000                     01467899999999999999999   


Q ss_pred             ChHHHhcCCCCCCCCccccccCCCCCCCCC
Q 025601          202 GASAIKHHPFFQGVNWALLRCTTPPFVPPP  231 (250)
Q Consensus       202 ~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~  231 (250)
                       ++++|+||||...........++|.+|..
T Consensus       313 -~~e~l~hp~~~~~~~~~~~~~~~~~~~~~  341 (371)
T 2xrw_A          313 -VDEALQHPYINVWYDPSEAEAPPPKIPDK  341 (371)
T ss_dssp             -HHHHHHSHHHHTTCCHHHHTCCCCCCCTT
T ss_pred             -HHHHhCCcchhhhcCccccCCCCCCCCCh
Confidence             99999999998755554555556665543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=1.2e-30  Score=227.25  Aligned_cols=152  Identities=22%  Similarity=0.405  Sum_probs=110.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||++............                                       
T Consensus       147 ~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~---------------------------------------  187 (389)
T 3gni_B          147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV---------------------------------------  187 (389)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC---------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc---------------------------------------
Confidence            68999999999999999999999999987543221110000                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                             ........+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.....
T Consensus       188 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  244 (389)
T 3gni_B          188 -----------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ  244 (389)
T ss_dssp             -----------------------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT
T ss_pred             -----------------------cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                                   0000112368899999999988  568999999999999999999999998876555


Q ss_pred             HHHHHHHhccC--------------------------------------------CCCCCCCChHHHHHHHHhcccCccc
Q 025601          160 TLANIVARALE--------------------------------------------FPKEPAVPATAKDLISQLLAKDPER  195 (250)
Q Consensus       160 ~~~~i~~~~~~--------------------------------------------~p~~~~~~~~~~~ll~~~L~~dP~~  195 (250)
                      .+..++.....                                            .+....++..+.+||.+||+.||++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  324 (389)
T 3gni_B          245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDA  324 (389)
T ss_dssp             HHHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTT
T ss_pred             HHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCccc
Confidence            54443322111                                            1123457889999999999999999


Q ss_pred             cCCCccChHHHhcCCCCCCCCccc
Q 025601          196 RLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       196 R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      |||    ++++|+||||+++.|..
T Consensus       325 Rpt----a~ell~hp~f~~~~~~~  344 (389)
T 3gni_B          325 RPS----ASTLLNHSFFKQIKRRA  344 (389)
T ss_dssp             SCC----HHHHTTSGGGGGC---C
T ss_pred             CCC----HHHHhcCHHHHHHhhcc
Confidence            999    99999999999988754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=1.6e-29  Score=219.00  Aligned_cols=143  Identities=31%  Similarity=0.460  Sum_probs=116.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.....                                             
T Consensus       163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~---------------------------------------------  197 (371)
T 4exu_A          163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------------  197 (371)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred             CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence            69999999999999999999999999988532211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....+.
T Consensus       198 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  250 (371)
T 4exu_A          198 ---------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ  250 (371)
T ss_dssp             -----------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                       012368899999999987 5689999999999999999999999999888887


Q ss_pred             HHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +.+++...+..+.                             ...++..+.+||.+||+.||++|||    ++++|+|||
T Consensus       251 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~  326 (371)
T 4exu_A          251 LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQALTHPF  326 (371)
T ss_dssp             HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGG
T ss_pred             HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC----HHHHhcCcc
Confidence            7777653322110                             1356899999999999999999999    999999999


Q ss_pred             CCCCCcccc
Q 025601          212 FQGVNWALL  220 (250)
Q Consensus       212 ~~~~~~~~~  220 (250)
                      |+.......
T Consensus       327 f~~~~~~~~  335 (371)
T 4exu_A          327 FEPFRDPEE  335 (371)
T ss_dssp             GTTTCCGGG
T ss_pred             cccCCCccc
Confidence            998765543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=5e-30  Score=221.66  Aligned_cols=139  Identities=36%  Similarity=0.643  Sum_probs=118.4

Q ss_pred             ccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.+   +.+||+|||++........                                        
T Consensus       147 ~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~----------------------------------------  186 (362)
T 2bdw_A          147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA----------------------------------------  186 (362)
T ss_dssp             TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS----------------------------------------
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc----------------------------------------
Confidence            699999999999999864   4599999999854332110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       187 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~  236 (362)
T 2bdw_A          187 ------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  236 (362)
T ss_dssp             ------------------------------CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                                          01246899999999999988999999999999999999999999998888


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .....+......++..  ..++.++.+||.+||+.||++||+    +.++|.||||.+
T Consensus       237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~  290 (362)
T 2bdw_A          237 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSHHHHT
T ss_pred             HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcccCC
Confidence            8888888776665543  368999999999999999999999    999999999975

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=5.6e-30  Score=220.54  Aligned_cols=98  Identities=28%  Similarity=0.453  Sum_probs=82.6

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCC-----------------
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKE-----------------  174 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~-----------------  174 (250)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+.+..+.......+..                 
T Consensus       219 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  298 (360)
T 3llt_A          219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKD  298 (360)
T ss_dssp             CCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETT
T ss_pred             ccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcc
Confidence            368999999999999999999999999999999999999999988887777766544333210                 


Q ss_pred             ---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          175 ---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       175 ---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                                                 ...++.+.+||.+||+.||++|||    ++++|+||||+
T Consensus       299 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----a~elL~hp~f~  360 (360)
T 3llt_A          299 ELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS----PAELLKHKFLE  360 (360)
T ss_dssp             TTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGC
T ss_pred             cceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCC----HHHHhcCcccC
Confidence                                       012366789999999999999999    99999999996

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=1.2e-29  Score=217.90  Aligned_cols=149  Identities=30%  Similarity=0.404  Sum_probs=118.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  181 (351)
T 3mi9_A          143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-----------------------------------------  181 (351)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSS-----------------------------------------
T ss_pred             CCeeCCCCCHHHEEEcCCCCEEEccchhccccccccccc-----------------------------------------
Confidence            699999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                              ........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+......
T Consensus       182 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  237 (351)
T 3mi9_A          182 ------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ  237 (351)
T ss_dssp             ------------------------CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ------------------------ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                                    0011123689999999999874 479999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCCCC--C----------------------------CChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFPKEP--A----------------------------VPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~--~----------------------------~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      +..+.......+...  .                            .++.+.+||.+||+.||++|||    ++++|+||
T Consensus       238 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp  313 (351)
T 3mi9_A          238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDALNHD  313 (351)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSG
T ss_pred             HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----HHHHhCCC
Confidence            777766544433221  0                            2667999999999999999999    99999999


Q ss_pred             CCCCCCccc
Q 025601          211 FFQGVNWAL  219 (250)
Q Consensus       211 ~~~~~~~~~  219 (250)
                      ||.+..++.
T Consensus       314 ~f~~~~~~~  322 (351)
T 3mi9_A          314 FFWSDPMPS  322 (351)
T ss_dssp             GGGSSSCCC
T ss_pred             CcCCCCCcc
Confidence            999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2e-30  Score=220.57  Aligned_cols=140  Identities=24%  Similarity=0.476  Sum_probs=119.7

Q ss_pred             ccceeecCCCCcEEeCC--CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~--~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+||+++.  ++.+||+|||++........                                         
T Consensus       121 ~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~-----------------------------------------  159 (321)
T 1tki_A          121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-----------------------------------------  159 (321)
T ss_dssp             TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-----------------------------------------
T ss_pred             CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-----------------------------------------
Confidence            69999999999999987  78999999999855432110                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.....
T Consensus       160 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  210 (321)
T 1tki_A          160 -----------------------------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             -----------------------------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -----------------------------cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence                                         001368899999999998888999999999999999999999999999888


Q ss_pred             HHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          160 TLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      .+..+......++..  ..++.++.+||.+||..||++|||    +.++|+||||++.
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~~  264 (321)
T 1tki_A          211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHSC
T ss_pred             HHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcC----HHHHhcChhhccC
Confidence            888888776654432  468999999999999999999999    9999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.96  E-value=3.3e-30  Score=223.63  Aligned_cols=143  Identities=34%  Similarity=0.554  Sum_probs=121.6

Q ss_pred             ccceeecCCCCcEEe--CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLV--RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill--~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+|||+  +.++.+||+|||+++.......                                         
T Consensus       206 ~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-----------------------------------------  244 (373)
T 2x4f_A          206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-----------------------------------------  244 (373)
T ss_dssp             TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-----------------------------------------
T ss_pred             CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-----------------------------------------
Confidence            689999999999999  5668899999999855432110                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+
T Consensus       245 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  295 (373)
T 2x4f_A          245 -----------------------------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE  295 (373)
T ss_dssp             -----------------------------CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -----------------------------cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                         011358999999999988889999999999999999999999999999888


Q ss_pred             HHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          160 TLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      .+.++......++..  ..++.++.+||.+||+.||++||+    ++++|+||||++.++.
T Consensus       296 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e~l~hp~~~~~~~~  352 (373)
T 2x4f_A          296 TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWLSDHKLH  352 (373)
T ss_dssp             HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHCHHHH
T ss_pred             HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcCcCCCchh
Confidence            888888766554432  468999999999999999999999    9999999999998764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=1.6e-29  Score=216.97  Aligned_cols=158  Identities=28%  Similarity=0.382  Sum_probs=118.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..............                                     
T Consensus       131 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-------------------------------------  173 (353)
T 2b9h_A          131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-------------------------------------  173 (353)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCcc-------------------------------------
Confidence            6999999999999999999999999999866543221100000                                     


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                            ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus       174 ----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  231 (353)
T 2b9h_A          174 ----------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ  231 (353)
T ss_dssp             ----------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence                                  00001123468999999998875 5689999999999999999999999999887766


Q ss_pred             HHHHHHhccCCC------------------------C------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFP------------------------K------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p------------------------~------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      +..+....+...                        .      ...++.++.+||.+||+.||++|||    ++++++||
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp  307 (353)
T 2b9h_A          232 LLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKEALEHP  307 (353)
T ss_dssp             HHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSG
T ss_pred             HHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCC----HHHHhcCc
Confidence            665544222111                        0      1357889999999999999999999    99999999


Q ss_pred             CCCCCCcccccc
Q 025601          211 FFQGVNWALLRC  222 (250)
Q Consensus       211 ~~~~~~~~~~~~  222 (250)
                      ||+...+.....
T Consensus       308 ~~~~~~~~~~~~  319 (353)
T 2b9h_A          308 YLQTYHDPNDEP  319 (353)
T ss_dssp             GGTTTCCTTSSC
T ss_pred             cccccCCccccc
Confidence            999988765443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=1.9e-31  Score=231.00  Aligned_cols=142  Identities=22%  Similarity=0.347  Sum_probs=113.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------------------------------------  249 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------------------------------------------  249 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------------------------------------------
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-------------------------------------------
Confidence            6999999999999999999999999999854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   ...+|+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.....
T Consensus       250 -----------------------------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  300 (371)
T 3q60_A          250 -----------------------------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI  300 (371)
T ss_dssp             -----------------------------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTC
T ss_pred             -----------------------------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCccc
Confidence                                         1246799999999987  568999999999999999999999998764221


Q ss_pred             H--H-----HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          160 T--L-----ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       160 ~--~-----~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .  .     .........++....++..+.+||.+||+.||++|||    +.++++||||++++|..
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          301 KGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL----PLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             TTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCC----HHHHTTSHHHHHHHHHH
T ss_pred             ccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCHHHHHHHHHH
Confidence            0  0     0011122334444578999999999999999999999    99999999999988753

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.96  E-value=8.7e-30  Score=216.24  Aligned_cols=145  Identities=35%  Similarity=0.574  Sum_probs=121.8

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||+++.++    .+||+|||++........                                       
T Consensus       134 ~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------  174 (321)
T 2a2a_A          134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---------------------------------------  174 (321)
T ss_dssp             TTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC---------------------------------------
T ss_pred             CCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc---------------------------------------
Confidence            6899999999999999887    799999998854332100                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                     .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       175 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  223 (321)
T 2a2a_A          175 -------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK  223 (321)
T ss_dssp             -------------------------------CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             -------------------------------ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH
Confidence                                           0123589999999999988899999999999999999999999999888


Q ss_pred             HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          158 ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      .+.+..+......++..  ..++..+.+||.+||+.||++|||    ++++++||||.+++|...
T Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~hp~~~~~~~~~~  284 (321)
T 2a2a_A          224 QETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDNQQA  284 (321)
T ss_dssp             HHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC----HHHHHHSTTTSCSSHHHH
T ss_pred             HHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhcCccccCCCcccc
Confidence            88887776655443321  468899999999999999999999    999999999999988643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=1.6e-29  Score=220.29  Aligned_cols=143  Identities=34%  Similarity=0.547  Sum_probs=119.2

Q ss_pred             ccceeecCCCCcEEeCC--CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~--~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+|||++.  ++.+||+|||+++.......                                         
T Consensus       168 ~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~-----------------------------------------  206 (387)
T 1kob_A          168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-----------------------------------------  206 (387)
T ss_dssp             TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC-----------------------------------------
T ss_pred             CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc-----------------------------------------
Confidence            69999999999999974  47799999999855432110                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus       207 -----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  257 (387)
T 1kob_A          207 -----------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE  257 (387)
T ss_dssp             -----------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred             -----------------------------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence                                         001258999999999999889999999999999999999999999988888


Q ss_pred             HHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          160 TLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       160 ~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      .+..+......++.  ...++.++.+||.+||+.||++|||    +.++|+||||++..+.
T Consensus       258 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~~  314 (387)
T 1kob_A          258 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGDHSN  314 (387)
T ss_dssp             HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSCCTT
T ss_pred             HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCccccCCccc
Confidence            88777766544333  2468999999999999999999999    9999999999986543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=1.3e-29  Score=216.65  Aligned_cols=164  Identities=27%  Similarity=0.427  Sum_probs=127.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       160 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  196 (335)
T 2owb_A          160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-------------------------------------------  196 (335)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-------------------------------------------
T ss_pred             CCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-------------------------------------------
Confidence            6899999999999999999999999999855332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+..
T Consensus       197 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  250 (335)
T 2owb_A          197 --------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY  250 (335)
T ss_dssp             --------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             --------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH
Confidence                                      001236899999999999988999999999999999999999999998887777


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccccCCCCCCCCCCCcCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE  240 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (250)
                      ..+.......  +..++..+.+||.+||+.||++||+    ++++++||||.+.........+-..+|+.+.....|..
T Consensus       251 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (335)
T 2owb_A          251 LRIKKNEYSI--PKHINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLD  323 (335)
T ss_dssp             HHHHHTCCCC--CTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTSCCCSCCCGGGGTSCCCCCSSCC---
T ss_pred             HHHhcCCCCC--CccCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccCCCccccCCcccccCCCccccCccccC
Confidence            7776665544  3468999999999999999999999    99999999998765443322222234444444444433

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.96  E-value=8e-30  Score=215.12  Aligned_cols=145  Identities=30%  Similarity=0.472  Sum_probs=112.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       121 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  158 (311)
T 4agu_A          121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY------------------------------------------  158 (311)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc------------------------------------------
Confidence            69999999999999999999999999998554321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+ ..++.++||||+||++|+|++|..||.+....+.
T Consensus       159 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  211 (311)
T 4agu_A          159 ---------------------------YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ  211 (311)
T ss_dssp             ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------------------cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       002358899999999987 5589999999999999999999999999887777


Q ss_pred             HHHHHHhccC-------------------CCCC----------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALE-------------------FPKE----------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~-------------------~p~~----------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ...+......                   .+..          ..++..+.+||.+||+.||++|||    ++++++|||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~  287 (311)
T 4agu_A          212 LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLLHHPY  287 (311)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHTSGG
T ss_pred             HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC----HHHHhcChH
Confidence            6665543221                   1111          357888999999999999999999    999999999


Q ss_pred             CCCCCccc
Q 025601          212 FQGVNWAL  219 (250)
Q Consensus       212 ~~~~~~~~  219 (250)
                      |+++.+..
T Consensus       288 f~~~~~~~  295 (311)
T 4agu_A          288 FENIREIE  295 (311)
T ss_dssp             GTTCC---
T ss_pred             HHhccCHH
Confidence            99988753

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.96  E-value=6.5e-30  Score=218.94  Aligned_cols=105  Identities=28%  Similarity=0.487  Sum_probs=87.3

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCC------------------
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK------------------  173 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~------------------  173 (250)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||.+......+..+.......|.                  
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  278 (355)
T 2eu9_A          199 IVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLV  278 (355)
T ss_dssp             SCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEEC
T ss_pred             CcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccc
Confidence            36899999999999988999999999999999999999999998877766665554333221                  


Q ss_pred             ------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          174 ------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       174 ------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                                              ....+.++.+||.+||+.||++|||    ++++++||||.+++|...
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~  345 (355)
T 2eu9_A          279 WDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT----LAEALLHPFFAGLTPEER  345 (355)
T ss_dssp             CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGCCHHHH
T ss_pred             cccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcCCChhhc
Confidence                                    1112357889999999999999999    999999999999988644

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=7.2e-30  Score=223.44  Aligned_cols=140  Identities=30%  Similarity=0.497  Sum_probs=109.8

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +|||||||||+|||++.   ++.+||+|||+++.......                                        
T Consensus       180 ~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~----------------------------------------  219 (400)
T 1nxk_A          180 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----------------------------------------  219 (400)
T ss_dssp             TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------------------------------------
T ss_pred             CCccccCcCcceEEEecCCCCccEEEEecccccccCCCCc----------------------------------------
Confidence            69999999999999987   78999999999854322110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       220 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  269 (400)
T 1nxk_A          220 ------------------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  269 (400)
T ss_dssp             -------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTC
T ss_pred             ------------------------------cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccc
Confidence                                          01236899999999999888999999999999999999999999765432


Q ss_pred             ----HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 ----LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ----~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                          .....+..+...++..  ..++.++.+||.+||+.||++|||    ++++++||||.+.
T Consensus       270 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~~  328 (400)
T 1nxk_A          270 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQS  328 (400)
T ss_dssp             SSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHTT
T ss_pred             cccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccCC
Confidence                1344455555544432  468999999999999999999999    9999999999753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=216.97  Aligned_cols=143  Identities=34%  Similarity=0.549  Sum_probs=110.5

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.   ++.+||+|||+++.......                                        
T Consensus       167 ~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------  206 (349)
T 2w4o_A          167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL----------------------------------------  206 (349)
T ss_dssp             TTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------------------------------------
T ss_pred             CCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc----------------------------------------
Confidence            68999999999999975   78999999998854321100                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       207 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  256 (349)
T 2w4o_A          207 ------------------------------MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD  256 (349)
T ss_dssp             ------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH
T ss_pred             ------------------------------cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                                          01236899999999999988999999999999999999999999877655


Q ss_pred             H-HHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          159 L-TLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 ~-~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      . .+..+.......+.  ...++.++.+||.+||+.||++||+    +.++++||||.+..+.
T Consensus       257 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          257 QFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTGKAAN  315 (349)
T ss_dssp             HHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTTSTTCC
T ss_pred             HHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCccc
Confidence            5 45555554443322  2568999999999999999999999    9999999999987643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=1.1e-29  Score=219.40  Aligned_cols=144  Identities=26%  Similarity=0.425  Sum_probs=115.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..........                                         
T Consensus       147 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  185 (364)
T 3qyz_A          147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT-----------------------------------------  185 (364)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC-----------------------------------------
T ss_pred             CCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCcc-----------------------------------------
Confidence            699999999999999999999999999985533211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                               ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+....+.
T Consensus       186 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  240 (364)
T 3qyz_A          186 -------------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ  240 (364)
T ss_dssp             -------------------------CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH
T ss_pred             -------------------------ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH
Confidence                                     001124689999999987654 489999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+....+..+.                             ...++.++.+||.+||+.||++|||    ++++|+|||
T Consensus       241 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~  316 (364)
T 3qyz_A          241 LNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALAHPY  316 (364)
T ss_dssp             HHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGG
T ss_pred             HHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcc
Confidence            7776543322111                             1357889999999999999999999    999999999


Q ss_pred             CCCC
Q 025601          212 FQGV  215 (250)
Q Consensus       212 ~~~~  215 (250)
                      |++.
T Consensus       317 ~~~~  320 (364)
T 3qyz_A          317 LEQY  320 (364)
T ss_dssp             GTTT
T ss_pred             hhhc
Confidence            9986

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=6.3e-30  Score=218.78  Aligned_cols=148  Identities=30%  Similarity=0.523  Sum_probs=119.4

Q ss_pred             ccceeecCCCCcEEeCCCC--CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSDG--HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~--~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+||+++.++  .+||+|||++...........                                      
T Consensus       187 ~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~--------------------------------------  228 (345)
T 3hko_A          187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY--------------------------------------  228 (345)
T ss_dssp             TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------------------------------------
T ss_pred             CCccccCCChhhEEEecCCCceEEEeeccccccccccCcccc--------------------------------------
Confidence            6899999999999998776  899999999854322111000                                      


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                 .......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+...
T Consensus       229 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  281 (345)
T 3hko_A          229 ---------------------------YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND  281 (345)
T ss_dssp             ---------------------------------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ---------------------------ccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh
Confidence                                       00112368999999999976  5689999999999999999999999999998


Q ss_pred             HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          158 ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      .+...++......++.+  ..++..+.+||.+||+.||++||+    +.++++||||+++.|.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~l~hp~~~~~~~~  340 (345)
T 3hko_A          282 ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD----AMRALQHPWISQFSDK  340 (345)
T ss_dssp             HHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHHHSHHHHTTSSC
T ss_pred             HHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCC----HHHHhcChhhccChHh
Confidence            88888888776554443  247899999999999999999999    9999999999987653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=2.9e-30  Score=217.95  Aligned_cols=134  Identities=20%  Similarity=0.328  Sum_probs=91.7

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      |||||||||+|||++.++.+||+|||+++.........                                          
T Consensus       128 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~------------------------------------------  165 (303)
T 3hmm_A          128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI------------------------------------------  165 (303)
T ss_dssp             CEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE------------------------------------------
T ss_pred             CEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce------------------------------------------
Confidence            89999999999999999999999999986543221100                                          


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC------CCCchhHHHHHHHHHHHHHhCCCCCCCC-
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGV-  155 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~vl~elltg~~pf~~~-  155 (250)
                                             .......+||+.|||||++.+.      .++.++|||||||++|||+||..||... 
T Consensus       166 -----------------------~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~  222 (303)
T 3hmm_A          166 -----------------------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  222 (303)
T ss_dssp             -----------------------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCC
T ss_pred             -----------------------eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccc
Confidence                                   0011134799999999999764      2578999999999999999997665321 


Q ss_pred             -------------ChHHHHHHHH-HhccCCCCCC-----CCChHHHHHHHHhcccCccccCCCcc
Q 025601          156 -------------DHELTLANIV-ARALEFPKEP-----AVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       156 -------------~~~~~~~~i~-~~~~~~p~~~-----~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                                   .....+.+.+ ........+.     .++..+.+||.+||+.||++|||+.+
T Consensus       223 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e  287 (303)
T 3hmm_A          223 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             cccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence                         1222333332 2222222111     12346889999999999999999444

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=1.8e-29  Score=214.58  Aligned_cols=142  Identities=26%  Similarity=0.536  Sum_probs=117.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       160 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  196 (321)
T 2c30_A          160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-------------------------------------------  196 (321)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-------------------------------------------
T ss_pred             CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-------------------------------------------
Confidence            6899999999999999999999999998754332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       197 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~  250 (321)
T 2c30_A          197 --------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  250 (321)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             --------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      011246899999999999888999999999999999999999999988877777


Q ss_pred             HHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+...... ......++..+.+||.+||+.||++||+    ++++++||||.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~  302 (321)
T 2c30_A          251 KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFLLQTG  302 (321)
T ss_dssp             HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGGGCC
T ss_pred             HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhccCC
Confidence            666554322 2223457899999999999999999999    99999999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=1.7e-29  Score=210.05  Aligned_cols=139  Identities=32%  Similarity=0.599  Sum_probs=117.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.++|+|||++.......                                           
T Consensus       127 ~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~-------------------------------------------  163 (279)
T 3fdn_A          127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------------------------------------------  163 (279)
T ss_dssp             TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----------------------------------------------
T ss_pred             hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc-------------------------------------------
Confidence            4699999999999999999999999999874322111                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       164 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  215 (279)
T 3fdn_A          164 ----------------------------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET  215 (279)
T ss_dssp             --------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------------------------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH
Confidence                                        0123588999999999988899999999999999999999999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ...+......+  +..++..+.+||.+||+.||++||+    ++++++||||.+..
T Consensus       216 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          216 YKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITANS  265 (279)
T ss_dssp             HHHHHHTCCCC--CTTSCHHHHHHHHHHCCSSGGGSCC----HHHHHHCHHHHHHC
T ss_pred             HHHHHhCCCCC--CCcCCHHHHHHHHHHhccChhhCCC----HHHHhhCccccCCc
Confidence            77776655444  4468999999999999999999999    99999999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=3e-29  Score=212.79  Aligned_cols=143  Identities=32%  Similarity=0.457  Sum_probs=119.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.......                                            
T Consensus       139 ~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------  174 (326)
T 1blx_A          139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------  174 (326)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG--------------------------------------------
T ss_pred             CCceeccCCHHHeEEcCCCCEEEecCcccccccCCC--------------------------------------------
Confidence            689999999999999999999999999885432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+......+
T Consensus       175 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  228 (326)
T 1blx_A          175 --------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL  228 (326)
T ss_dssp             --------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence                                      001236889999999999988999999999999999999999999999888888


Q ss_pred             HHHHHhccCCC-------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALEFP-------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~~p-------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..++......+                         ....++..+.+||.+||..||++||+    +++++.||||++++
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~  304 (326)
T 1blx_A          229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYFQDLE  304 (326)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTCC
T ss_pred             HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC----HHHHhcCccccccc
Confidence            77765322110                         11357889999999999999999999    99999999999987


Q ss_pred             cc
Q 025601          217 WA  218 (250)
Q Consensus       217 ~~  218 (250)
                      +.
T Consensus       305 ~~  306 (326)
T 1blx_A          305 RC  306 (326)
T ss_dssp             CC
T ss_pred             hh
Confidence            64

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=3.2e-29  Score=208.70  Aligned_cols=145  Identities=34%  Similarity=0.606  Sum_probs=121.8

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++.   +||+|||++........                                        
T Consensus       124 ~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------  163 (284)
T 3kk8_A          124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA----------------------------------------  163 (284)
T ss_dssp             TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB----------------------------------------
T ss_pred             CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc----------------------------------------
Confidence            68999999999999986654   99999998854332110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       164 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  213 (284)
T 3kk8_A          164 ------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  213 (284)
T ss_dssp             ------------------------------CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh
Confidence                                          01236889999999999988999999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      .....+.......+..  ..++.++.+||.+||+.||++||+    ++++++||||.+..+...
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~  273 (284)
T 3kk8_A          214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICNRERVAS  273 (284)
T ss_dssp             HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSHHHHSCCCGGG
T ss_pred             HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCC----HHHHhcCccccCChhHHh
Confidence            8888877766554443  468999999999999999999999    999999999998776443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=2.8e-29  Score=209.28  Aligned_cols=138  Identities=33%  Similarity=0.633  Sum_probs=117.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.......                                           
T Consensus       132 ~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------  168 (284)
T 2vgo_A          132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-------------------------------------------  168 (284)
T ss_dssp             TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-------------------------------------------
T ss_pred             HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc-------------------------------------------
Confidence            4799999999999999999999999999874322110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+......
T Consensus       169 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  220 (284)
T 2vgo_A          169 ----------------------------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET  220 (284)
T ss_dssp             ----------------------------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------------------------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH
Confidence                                        0123588999999999998899999999999999999999999998888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ...+......+  +..++..+.+||.+||+.||++||+    ++++++||||+..
T Consensus       221 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~h~~~~~~  269 (284)
T 2vgo_A          221 HRRIVNVDLKF--PPFLSDGSKDLISKLLRYHPPQRLP----LKGVMEHPWVKAN  269 (284)
T ss_dssp             HHHHHTTCCCC--CTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTCHHHHHH
T ss_pred             HHHHhccccCC--CCcCCHHHHHHHHHHhhcCHhhCCC----HHHHhhCHHHHhh
Confidence            77776655444  3468999999999999999999999    9999999999863

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.96  E-value=4.8e-30  Score=220.17  Aligned_cols=145  Identities=33%  Similarity=0.571  Sum_probs=114.7

Q ss_pred             ccceeecCCCCcEEeCCC----CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD----GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~----~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||++..+    +.+||+|||+++.......                                       
T Consensus       135 ~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------  175 (342)
T 2qr7_A          135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG---------------------------------------  175 (342)
T ss_dssp             TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC---------------------------------------
T ss_pred             CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC---------------------------------------
Confidence            699999999999998532    3599999999855322110                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV--  155 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~--  155 (250)
                                                    .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.  
T Consensus       176 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  225 (342)
T 2qr7_A          176 ------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD  225 (342)
T ss_dssp             ------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT
T ss_pred             ------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc
Confidence                                          011236899999999998877899999999999999999999999863  


Q ss_pred             -ChHHHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          156 -DHELTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       156 -~~~~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                       ...+.+..+......++.  ...++.++.+||.+||+.||++||+    +.++++||||.+  |..+.
T Consensus       226 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~~il~hp~~~~--~~~~~  288 (342)
T 2qr7_A          226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWIVH--WDQLP  288 (342)
T ss_dssp             SCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHT--GGGSC
T ss_pred             CCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCCeecC--ccccc
Confidence             345556666665554432  2468999999999999999999999    999999999954  66554

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=2.2e-30  Score=221.80  Aligned_cols=137  Identities=29%  Similarity=0.501  Sum_probs=111.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       127 ~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~-------------------------------------------  163 (336)
T 3h4j_B          127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-------------------------------------------  163 (336)
T ss_dssp             HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT-------------------------------------------
T ss_pred             CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc-------------------------------------------
Confidence            5899999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+......
T Consensus       164 ---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~  216 (336)
T 3h4j_B          164 ---------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL  216 (336)
T ss_dssp             ---------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC
T ss_pred             ---------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH
Confidence                                       012368999999999998775 7899999999999999999999987654444


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ...+....  ...+..++..+.+||.+||+.||++|||    ++++++||||+.
T Consensus       217 ~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~  264 (336)
T 3h4j_B          217 FKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRIT----IQEIRRDPWFNV  264 (336)
T ss_dssp             BCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred             HHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcC----HHHHHhChhhcc
Confidence            33332222  2334568999999999999999999999    999999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=7.8e-30  Score=219.47  Aligned_cols=142  Identities=31%  Similarity=0.559  Sum_probs=115.1

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.++.   +||+|||++........                                        
T Consensus       149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~----------------------------------------  188 (351)
T 3c0i_A          149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL----------------------------------------  188 (351)
T ss_dssp             TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred             CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence            69999999999999986554   99999999855432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+. ..
T Consensus       189 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~  238 (351)
T 3c0i_A          189 -----------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KE  238 (351)
T ss_dssp             -----------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HH
T ss_pred             -----------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HH
Confidence                                         011236899999999999988999999999999999999999999875 34


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      .....+.......+..  ..++.++.+||.+||+.||++||+    +.++|+||||++.++
T Consensus       239 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~~~~  295 (351)
T 3c0i_A          239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERDR  295 (351)
T ss_dssp             HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTHHH
T ss_pred             HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcChhhcCCcc
Confidence            5556666655443321  468999999999999999999999    999999999998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=2.2e-29  Score=216.45  Aligned_cols=138  Identities=25%  Similarity=0.349  Sum_probs=118.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++......                                             
T Consensus       173 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---------------------------------------------  207 (348)
T 1u5q_A          173 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---------------------------------------------  207 (348)
T ss_dssp             TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------------------------
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---------------------------------------------
Confidence            68999999999999999999999999987443211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ....||+.|+|||++.   +..++.++|||||||++|+|++|..||.+....
T Consensus       208 ----------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  259 (348)
T 1u5q_A          208 ----------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  259 (348)
T ss_dssp             ----------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             ----------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                                        0236899999999985   455899999999999999999999999998888


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+..+.....+......++..+.+||.+||+.||++|||    ++++++||||....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          260 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRER  313 (348)
T ss_dssp             HHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHSCC
T ss_pred             HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHhhChhhhccC
Confidence            7777777766555555678999999999999999999999    99999999997643

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=3.7e-29  Score=209.54  Aligned_cols=143  Identities=27%  Similarity=0.473  Sum_probs=119.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       134 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  170 (294)
T 2rku_A          134 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-------------------------------------------  170 (294)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-------------------------------------------
T ss_pred             CCccccCCChHhEEEcCCCCEEEEeccCceecccCcc-------------------------------------------
Confidence            6899999999999999999999999998854321110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+..
T Consensus       171 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  224 (294)
T 2rku_A          171 --------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY  224 (294)
T ss_dssp             --------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             --------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      001236889999999999888999999999999999999999999998887777


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      ..+.......  +..++..+.+||.+||+.||++||+    ++++++||||.+...+.
T Consensus       225 ~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          225 LRIKKNEYSI--PKHINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSGYIPA  276 (294)
T ss_dssp             HHHHTTCCCC--CTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTSCCCS
T ss_pred             HHHhhccCCC--ccccCHHHHHHHHHHcccChhhCcC----HHHHhhChheecCCcCC
Confidence            7766554443  4478999999999999999999999    99999999998765543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=3.1e-29  Score=213.16  Aligned_cols=143  Identities=27%  Similarity=0.400  Sum_probs=108.9

Q ss_pred             ccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+|||++.++ .+||+|||+++.......                                          
T Consensus       149 ~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------  186 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE------------------------------------------  186 (330)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC------------------------------------------
T ss_pred             CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc------------------------------------------
Confidence            6899999999999999776 899999999854332110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGV-DHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~-~~~  158 (250)
                                                  .....+|..|+|||++.+ ..++.++|||||||++|+|++|..||... ...
T Consensus       187 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~  238 (330)
T 3nsz_A          187 ----------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY  238 (330)
T ss_dssp             ----------------------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred             ----------------------------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH
Confidence                                        012357889999999987 55899999999999999999999999543 333


Q ss_pred             HHHHHHHHhcc-------------C----------------------CCCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          159 LTLANIVARAL-------------E----------------------FPKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       159 ~~~~~i~~~~~-------------~----------------------~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                      +.+..+.....             .                      ......++.++.+||.+||+.||++|||    +
T Consensus       239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----a  314 (330)
T 3nsz_A          239 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----A  314 (330)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC----H
T ss_pred             HHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC----H
Confidence            33333322110             0                      0011227899999999999999999999    9


Q ss_pred             HHHhcCCCCCCCCcc
Q 025601          204 SAIKHHPFFQGVNWA  218 (250)
Q Consensus       204 ~~ll~hp~~~~~~~~  218 (250)
                      +++|+||||+++.|+
T Consensus       315 ~e~l~hp~f~~~~~~  329 (330)
T 3nsz_A          315 REAMEHPYFYTVVKD  329 (330)
T ss_dssp             HHHHTSGGGTTCC--
T ss_pred             HHHhcCccHhhhccC
Confidence            999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=214.53  Aligned_cols=135  Identities=23%  Similarity=0.402  Sum_probs=106.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||++........                                           
T Consensus       176 ~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------  212 (311)
T 3p1a_A          176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA-------------------------------------------  212 (311)
T ss_dssp             TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC-------------------------------------------
Confidence            6899999999999999999999999999754332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....||+.|+|||++.+ .++.++|||||||++|+|++|..+|.+..   ..
T Consensus       213 ---------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~~  261 (311)
T 3p1a_A          213 ---------------------------GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---GW  261 (311)
T ss_dssp             -----------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HH
T ss_pred             ---------------------------CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---HH
Confidence                                       011358999999999887 68999999999999999999987776533   23


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..+............++.++.+||.+||+.||++|||    ++++++||||++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~~~~  310 (311)
T 3p1a_A          262 QQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRAT----AEALLALPVLRQ  310 (311)
T ss_dssp             HHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGSC
T ss_pred             HHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHHhCccccC
Confidence            3333322222223468999999999999999999999    999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.96  E-value=2.1e-29  Score=214.36  Aligned_cols=101  Identities=32%  Similarity=0.540  Sum_probs=83.4

Q ss_pred             cccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCC------------------
Q 025601          112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPK------------------  173 (250)
Q Consensus       112 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~------------------  173 (250)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||.+....+....+.......|.                  
T Consensus       194 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  273 (339)
T 1z57_A          194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLD  273 (339)
T ss_dssp             SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEEC
T ss_pred             ccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccc
Confidence            36899999999999988999999999999999999999999988877666555443332221                  


Q ss_pred             ------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          174 ------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       174 ------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                                              ...++..+.+||.+||+.||++|||    ++++++||||+.++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~  336 (339)
T 1z57_A          274 WDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT----LREALKHPFFDLLK  336 (339)
T ss_dssp             CCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGGG
T ss_pred             ccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC----HHHHhcCHHHHHHh
Confidence                                    1123467889999999999999999    99999999999764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=1.1e-28  Score=212.03  Aligned_cols=143  Identities=31%  Similarity=0.458  Sum_probs=115.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++......                                             
T Consensus       145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------  179 (353)
T 3coi_A          145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE---------------------------------------------  179 (353)
T ss_dssp             TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred             CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence            69999999999999999999999999987542211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       180 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  232 (353)
T 3coi_A          180 ---------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ  232 (353)
T ss_dssp             -------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH
T ss_pred             ---------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       002357899999999987 5689999999999999999999999999887777


Q ss_pred             HHHHHHhccCC-----------------------------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEF-----------------------------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~-----------------------------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+....+..                             .....++..+.+||.+||+.||++|||    +++++.|||
T Consensus       233 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~  308 (353)
T 3coi_A          233 LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQALTHPF  308 (353)
T ss_dssp             HHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHHHHTSGG
T ss_pred             HHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcc
Confidence            77665532211                             112357899999999999999999999    999999999


Q ss_pred             CCCCCcccc
Q 025601          212 FQGVNWALL  220 (250)
Q Consensus       212 ~~~~~~~~~  220 (250)
                      |+.+.....
T Consensus       309 f~~~~~~~~  317 (353)
T 3coi_A          309 FEPFRDPEE  317 (353)
T ss_dssp             GTTTCCGGG
T ss_pred             hhhccCccc
Confidence            998776543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=2.8e-29  Score=218.96  Aligned_cols=144  Identities=29%  Similarity=0.491  Sum_probs=112.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+|||++ ++.+||+|||+++........                                         
T Consensus       173 ~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~-----------------------------------------  210 (390)
T 2zmd_A          173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-----------------------------------------  210 (390)
T ss_dssp             TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----------------------------------------------
T ss_pred             HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc-----------------------------------------
Confidence            47999999999999994 689999999998654321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----------CCCCchhHHHHHHHHHHHHHhCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----------EGHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                ......+||+.|+|||++.+           ..++.++|||||||++|+|++|.
T Consensus       211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~  264 (390)
T 2zmd_A          211 --------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK  264 (390)
T ss_dssp             -----------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCC
Confidence                                      00112468999999999875           35899999999999999999999


Q ss_pred             CCCCCCCh-HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          150 TPFRGVDH-ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       150 ~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .||.+... ...+..++........+...+..+.+||.+||+.||++||+    +.++|+||||+...
T Consensus       265 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~  328 (390)
T 2zmd_A          265 TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQT  328 (390)
T ss_dssp             CTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHSCC
T ss_pred             CcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC----HHHHhhCcCccccC
Confidence            99987643 34555566555555555667899999999999999999999    99999999998543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=4.7e-29  Score=209.07  Aligned_cols=147  Identities=38%  Similarity=0.607  Sum_probs=118.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       143 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  179 (298)
T 1phk_A          143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-------------------------------------------  179 (298)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC-------------------------------------------
T ss_pred             CCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcc-------------------------------------------
Confidence            6899999999999999999999999998754332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec------CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS------GEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 .....+|+.|+|||++.      ...++.++|||||||++|+|++|..||.+.
T Consensus       180 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  232 (298)
T 1phk_A          180 ---------------------------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR  232 (298)
T ss_dssp             ---------------------------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ---------------------------cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence                                       01235889999999985      345789999999999999999999999998


Q ss_pred             ChHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccccc
Q 025601          156 DHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~~  222 (250)
                      ........+.......+.+  ..++..+.+||.+||+.||++||+    +.++++||||++..+..+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~~~  297 (298)
T 1phk_A          233 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQYVVEEVRH  297 (298)
T ss_dssp             SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCTTC------
T ss_pred             cHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCC----HHHHHhChHhhhccchhhcc
Confidence            8887777777766554433  468999999999999999999999    99999999999998877653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=2e-29  Score=214.51  Aligned_cols=144  Identities=23%  Similarity=0.429  Sum_probs=113.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       124 ~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------  161 (323)
T 3tki_A          124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE------------------------------------------  161 (323)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE------------------------------------------
T ss_pred             CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc------------------------------------------
Confidence            69999999999999999999999999998543211100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChH-H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHE-L  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~-~  159 (250)
                                               .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... .
T Consensus       162 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  216 (323)
T 3tki_A          162 -------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ  216 (323)
T ss_dssp             -------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH
T ss_pred             -------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence                                     00112468999999999988775 78899999999999999999999876644 2


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ....+.......+....++..+.+||.+||+.||++|||    ++++++||||....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~  269 (323)
T 3tki_A          217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCCC
T ss_pred             HHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcC----HHHHhhChhhcccc
Confidence            333333333333334568999999999999999999999    99999999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=5.5e-29  Score=209.32  Aligned_cols=146  Identities=24%  Similarity=0.442  Sum_probs=119.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       128 ~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  165 (305)
T 2wtk_C          128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD------------------------------------------  165 (305)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS------------------------------------------
T ss_pred             CCeeecCCCcccEEEcCCCcEEeeccccccccCccccc------------------------------------------
Confidence            68999999999999999999999999988554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               .......||+.|+|||++.+..  ++.++|||||||++|+|++|..||.+.....
T Consensus       166 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  220 (305)
T 2wtk_C          166 -------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK  220 (305)
T ss_dssp             -------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH
Confidence                                     0001235889999999998754  3789999999999999999999999988877


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      ....+.......  +..++..+.+||.+||+.||++||+    ++++++||||+.......
T Consensus       221 ~~~~i~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~~~~~  275 (305)
T 2wtk_C          221 LFENIGKGSYAI--PGDCGPPLSDLLKGMLEYEPAKRFS----IRQIRQHSWFRKKHPPAE  275 (305)
T ss_dssp             HHHHHHHCCCCC--CSSSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSHHHHSCCCC-C
T ss_pred             HHHHHhcCCCCC--CCccCHHHHHHHHHHccCChhhCCC----HHHHhcCcccccCCCCcC
Confidence            777776655443  4578999999999999999999999    999999999998765543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=1.2e-29  Score=220.51  Aligned_cols=98  Identities=27%  Similarity=0.430  Sum_probs=78.2

Q ss_pred             ccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhccCCCC-------------
Q 025601          113 VGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD------HELTLANIVARALEFPK-------------  173 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~-------------  173 (250)
                      +||+.|+|||++.+..++.++|||||||++|+|++|..||.+..      ....+..+....+..+.             
T Consensus       254 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  333 (397)
T 1wak_A          254 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF  333 (397)
T ss_dssp             CSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred             CCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence            68999999999999889999999999999999999999998655      33344444433222211             


Q ss_pred             ---------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          174 ---------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       174 ---------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                                                 ....+..+.+||.+||+.||++|||    ++++|+||||++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~  397 (397)
T 1wak_A          334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT----AAECLRHPWLNS  397 (397)
T ss_dssp             CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCC----HHHHHTSGGGGC
T ss_pred             CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCC----HHHHhhCccccC
Confidence                                       1123456889999999999999999    999999999974

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=2.1e-29  Score=213.05  Aligned_cols=151  Identities=34%  Similarity=0.593  Sum_probs=107.4

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++.   +||+|||++.............                                   
T Consensus       130 ~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~-----------------------------------  174 (316)
T 2ac3_A          130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS-----------------------------------  174 (316)
T ss_dssp             TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------------------------------------------
T ss_pred             CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccc-----------------------------------
Confidence            68999999999999987765   9999999985543221100000                                   


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----EGHGSPVDWWTLGIFLFELFYGVTPFR  153 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~vl~elltg~~pf~  153 (250)
                                                 .......+||+.|+|||++.+     ..++.++|||||||++|+|++|..||.
T Consensus       175 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  227 (316)
T 2ac3_A          175 ---------------------------TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV  227 (316)
T ss_dssp             ----------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ---------------------------ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCc
Confidence                                       000112358999999999875     347899999999999999999999998


Q ss_pred             CCCh---------------HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          154 GVDH---------------ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       154 ~~~~---------------~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +...               ......+......++..  ..++..+.+||.+||+.||++|||    ++++++||||++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          228 GRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPWVQGCA  303 (316)
T ss_dssp             CCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSTTCC---
T ss_pred             ccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC----HHHHhcChhhcCCC
Confidence            7542               33444555554444322  358899999999999999999999    99999999999876


Q ss_pred             cc
Q 025601          217 WA  218 (250)
Q Consensus       217 ~~  218 (250)
                      +.
T Consensus       304 ~~  305 (316)
T 2ac3_A          304 PE  305 (316)
T ss_dssp             --
T ss_pred             Cc
Confidence            54

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=215.67  Aligned_cols=141  Identities=30%  Similarity=0.514  Sum_probs=109.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++ ++.+||+|||+++.........                                         
T Consensus       127 ~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~-----------------------------------------  164 (343)
T 3dbq_A          127 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV-----------------------------------------  164 (343)
T ss_dssp             TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------------------------------------------
T ss_pred             CCeecCCCCcceEEEE-CCcEEEeecccccccCcccccc-----------------------------------------
Confidence            6899999999999996 7889999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----------CCCCchhHHHHHHHHHHHHHhCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----------EGHGSPVDWWTLGIFLFELFYGVT  150 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~vl~elltg~~  150 (250)
                                                .....+||+.|+|||++.+           ..++.++|||||||++|+|++|..
T Consensus       165 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~  218 (343)
T 3dbq_A          165 --------------------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT  218 (343)
T ss_dssp             -------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------------------cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCC
Confidence                                      0112368999999999865           558999999999999999999999


Q ss_pred             CCCCCChH-HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          151 PFRGVDHE-LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       151 pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ||.+.... ..+..++........+...+..+.+||.+||+.||++|||    +.+++.||||+.
T Consensus       219 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~  279 (343)
T 3dbq_A          219 PFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQI  279 (343)
T ss_dssp             TTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHS
T ss_pred             cchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCC----HHHHHhCccccc
Confidence            99875543 4455555545555555667889999999999999999999    999999999974

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=4.5e-29  Score=213.70  Aligned_cols=145  Identities=31%  Similarity=0.518  Sum_probs=119.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.......                                            
T Consensus       171 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  206 (348)
T 2pml_X          171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK--------------------------------------------  206 (348)
T ss_dssp             SCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTE--------------------------------------------
T ss_pred             CCEeecCCChHhEEEcCCCcEEEecccccccccccc--------------------------------------------
Confidence            799999999999999999999999999875432210                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCc-hhHHHHHHHHHHHHHhCCCCCCCCCh-H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGS-PVDWWTLGIFLFELFYGVTPFRGVDH-E  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwSlG~vl~elltg~~pf~~~~~-~  158 (250)
                                                 .....+|..|+|||++.+. .++. ++|||||||++|+|++|..||.+... .
T Consensus       207 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  259 (348)
T 2pml_X          207 ---------------------------IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV  259 (348)
T ss_dssp             ---------------------------ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred             ---------------------------ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                                       0123588999999999887 5666 99999999999999999999998776 6


Q ss_pred             HHHHHHHHhccCCCCC-----------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          159 LTLANIVARALEFPKE-----------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~-----------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      +....+......++..                 ..++..+.+||.+||+.||++||+    ++++++||||.+.+|..+.
T Consensus       260 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps----~~e~l~hp~f~~~~~~~~~  335 (348)
T 2pml_X          260 ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT----SEDALKHEWLADTNIEDLR  335 (348)
T ss_dssp             HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGTTCCHHHHH
T ss_pred             HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC----HHHHhcCccccCCCHHHHH
Confidence            6666665554444422                 568999999999999999999999    9999999999999987654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=3.6e-29  Score=216.19  Aligned_cols=139  Identities=28%  Similarity=0.498  Sum_probs=106.0

Q ss_pred             ccceeecCCCCcEEeCCCCC--eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGH--IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~--~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+||+++.++.  +||+|||+++......                                          
T Consensus       135 ~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------  172 (361)
T 3uc3_A          135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS------------------------------------------  172 (361)
T ss_dssp             TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------------------------------------------
T ss_pred             CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC------------------------------------------
Confidence            69999999999999987665  9999999875321110                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCch-hHHHHHHHHHHHHHhCCCCCCCCCh-
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDH-  157 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~vl~elltg~~pf~~~~~-  157 (250)
                                                  .....+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+... 
T Consensus       173 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  224 (361)
T 3uc3_A          173 ----------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP  224 (361)
T ss_dssp             ------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C
T ss_pred             ----------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH
Confidence                                        0012368999999999998887655 8999999999999999999987543 


Q ss_pred             ---HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 ---ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 ---~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                         ...+..+......++....++.++.+||.+||+.||++|||    +++++.||||..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~  280 (361)
T 3uc3_A          225 RDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWFLK  280 (361)
T ss_dssp             CCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcC----HHHHHhCcchhc
Confidence               44555565666666666678999999999999999999999    999999999953

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=8e-29  Score=221.12  Aligned_cols=138  Identities=30%  Similarity=0.483  Sum_probs=118.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++.......                                           
T Consensus       134 ~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~-------------------------------------------  170 (476)
T 2y94_A          134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------------------------------------------  170 (476)
T ss_dssp             TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-------------------------------------------
T ss_pred             HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-------------------------------------------
Confidence            4799999999999999999999999999985432210                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 .....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.....
T Consensus       171 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  223 (476)
T 2y94_A          171 ---------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT  223 (476)
T ss_dssp             ---------------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH
T ss_pred             ---------------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH
Confidence                                       0012368999999999998775 789999999999999999999999988888


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ...++..+....  +..++.++.+||.+||+.||++|||    ++++++||||+.
T Consensus       224 ~~~~i~~~~~~~--p~~~s~~~~~Li~~~L~~dP~~Rpt----~~eil~hp~~~~  272 (476)
T 2y94_A          224 LFKKICDGIFYT--PQYLNPSVISLLKHMLQVDPMKRAT----IKDIREHEWFKQ  272 (476)
T ss_dssp             HHHHHHTTCCCC--CTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHT
T ss_pred             HHHHHhcCCcCC--CccCCHHHHHHHHHHcCCCchhCcC----HHHHHhCHHhhh
Confidence            888877665544  3468999999999999999999999    999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.95  E-value=1e-28  Score=207.99  Aligned_cols=139  Identities=35%  Similarity=0.579  Sum_probs=117.6

Q ss_pred             ccceeecCCCCcEEe---CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLV---RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||++   +.++.+||+|||++........                                        
T Consensus       125 ~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------  164 (304)
T 2jam_A          125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----------------------------------------  164 (304)
T ss_dssp             TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT----------------------------------------
T ss_pred             CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc----------------------------------------
Confidence            689999999999999   6788999999998743221100                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                     ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       165 -------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  213 (304)
T 2jam_A          165 -------------------------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES  213 (304)
T ss_dssp             -------------------------------HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             -------------------------------ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                                           0125889999999999988999999999999999999999999998888


Q ss_pred             HHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      .....+......++.  ...++..+.+||.+||..||++||+    +++++.||||++.
T Consensus       214 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~  268 (304)
T 2jam_A          214 KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT----CEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHHTSHHHHSS
T ss_pred             HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCccccCC
Confidence            888777776554433  3568999999999999999999999    9999999999874

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=2.1e-29  Score=225.48  Aligned_cols=142  Identities=33%  Similarity=0.524  Sum_probs=118.8

Q ss_pred             ccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++   .++.+||+|||++.........                                       
T Consensus       145 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------  185 (484)
T 3nyv_A          145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---------------------------------------  185 (484)
T ss_dssp             TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH---------------------------------------
T ss_pred             CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc---------------------------------------
Confidence            6999999999999994   5789999999987543322110                                       


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                     ...+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+....
T Consensus       186 -------------------------------~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  233 (484)
T 3nyv_A          186 -------------------------------KDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY  233 (484)
T ss_dssp             -------------------------------HHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------------------------------ccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH
Confidence                                           01258999999999877 5899999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      +.+..+......++.+  ..++..+.+||.+||+.||++|||    ++++|+||||+...+.
T Consensus       234 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~h~~~~~~~~~  291 (484)
T 3nyv_A          234 DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS----ARDALDHEWIQTYTKE  291 (484)
T ss_dssp             HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHHHTC-
T ss_pred             HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhhChhhcccccc
Confidence            8888888776554433  468999999999999999999999    9999999999876543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=7.1e-29  Score=207.07  Aligned_cols=139  Identities=28%  Similarity=0.402  Sum_probs=106.3

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+||+++.++.+||+|||++........                                            
T Consensus       130 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------  165 (290)
T 3fme_A          130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--------------------------------------------  165 (290)
T ss_dssp             CCCCCCCSGGGCEECTTCCEEBCCC-------------------------------------------------------
T ss_pred             CeecCCCCHHHEEECCCCCEEEeecCCccccccccc--------------------------------------------
Confidence            999999999999999999999999998855332110                                            


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCcee----cCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-Ch
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIV----SGEGHGSPVDWWTLGIFLFELFYGVTPFRGV-DH  157 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~vl~elltg~~pf~~~-~~  157 (250)
                                                .....||+.|+|||++    .+..++.++||||+||++|+|++|..||... ..
T Consensus       166 --------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  219 (290)
T 3fme_A          166 --------------------------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP  219 (290)
T ss_dssp             ------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH
T ss_pred             --------------------------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch
Confidence                                      0012588999999996    4556899999999999999999999999874 44


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ...+..+............++.++.+||.+||+.||++|||    ++++++||||+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~e~l~hp~f~~~  273 (290)
T 3fme_A          220 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHH
T ss_pred             HHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcC----HHHHHhCcccccC
Confidence            45555555555444444578999999999999999999999    9999999999853

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=6.3e-29  Score=214.11  Aligned_cols=141  Identities=31%  Similarity=0.521  Sum_probs=110.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.......                                           
T Consensus       153 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  189 (362)
T 3pg1_A          153 AGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-------------------------------------------  189 (362)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECCTTC----------------------------------------------------
T ss_pred             CcCEecCCChHHEEEcCCCCEEEEecCcccccccccc-------------------------------------------
Confidence            6899999999999999999999999999853221110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus       190 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  242 (362)
T 3pg1_A          190 ---------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ  242 (362)
T ss_dssp             ---------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------------------cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       012358899999999987 5689999999999999999999999999888877


Q ss_pred             HHHHHHhccCCCC------------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          161 LANIVARALEFPK------------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       161 ~~~i~~~~~~~p~------------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      +..+.........                              ...++..+.+||.+||+.||++|||    ++++++||
T Consensus       243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp  318 (362)
T 3pg1_A          243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRIS----TEQALRHP  318 (362)
T ss_dssp             HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSG
T ss_pred             HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCC----HHHHHcCc
Confidence            7777653322110                              1346788999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||+++.
T Consensus       319 ~f~~~~  324 (362)
T 3pg1_A          319 YFESLF  324 (362)
T ss_dssp             GGTTTC
T ss_pred             hhhhcc
Confidence            999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.95  E-value=1.7e-29  Score=217.65  Aligned_cols=144  Identities=30%  Similarity=0.429  Sum_probs=113.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++......                                             
T Consensus       151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------  185 (360)
T 3eqc_A          151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------  185 (360)
T ss_dssp             HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---------------------------------------------
T ss_pred             CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---------------------------------------------
Confidence            38999999999999999999999999987332100                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       186 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  239 (360)
T 3eqc_A          186 --------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE  239 (360)
T ss_dssp             --------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHH
T ss_pred             --------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                                      001236899999999999988999999999999999999999999876544321


Q ss_pred             ------------------------------------------HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC
Q 025601          162 ------------------------------------------ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS  199 (250)
Q Consensus       162 ------------------------------------------~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~  199 (250)
                                                                ..+............++.++.+||.+||+.||++||| 
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-  318 (360)
T 3eqc_A          240 LMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD-  318 (360)
T ss_dssp             HHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCC-
T ss_pred             HHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCC-
Confidence                                                      1222222222223457899999999999999999999 


Q ss_pred             ccChHHHhcCCCCCCCCcccc
Q 025601          200 TKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       200 ~~~a~~ll~hp~~~~~~~~~~  220 (250)
                         ++++++||||++.+|..+
T Consensus       319 ---~~ell~hp~~~~~~~~~~  336 (360)
T 3eqc_A          319 ---LKQLMVHAFIKRSDAEEV  336 (360)
T ss_dssp             ---HHHHHTSHHHHHHHHSCC
T ss_pred             ---HHHHhhChHhhcchHhhh
Confidence               999999999998877654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.95  E-value=3.4e-29  Score=213.45  Aligned_cols=144  Identities=31%  Similarity=0.475  Sum_probs=114.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  180 (331)
T 4aaa_A          143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV------------------------------------------  180 (331)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------------------------------
T ss_pred             CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc------------------------------------------
Confidence            68999999999999999999999999998543321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+......
T Consensus       181 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  233 (331)
T 4aaa_A          181 ---------------------------YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ  233 (331)
T ss_dssp             ------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---------------------------cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence                                       0012588999999999875 589999999999999999999999999888777


Q ss_pred             HHHHHHhccCCC-------------------C----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFP-------------------K----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p-------------------~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..++.......                   .          ...++..+.+||.+||+.||++|||    ++++|+|||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~  309 (331)
T 4aaa_A          234 LYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHDF  309 (331)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHH
T ss_pred             HHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC----HHHHhcCch
Confidence            776654322211                   0          1257899999999999999999999    999999999


Q ss_pred             CCCCCcc
Q 025601          212 FQGVNWA  218 (250)
Q Consensus       212 ~~~~~~~  218 (250)
                      |+..++.
T Consensus       310 f~~~~~~  316 (331)
T 4aaa_A          310 FQMDGFA  316 (331)
T ss_dssp             HHGGGHH
T ss_pred             hccCChh
Confidence            9987664

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.95  E-value=2.7e-29  Score=213.92  Aligned_cols=141  Identities=32%  Similarity=0.539  Sum_probs=94.9

Q ss_pred             ccceeecCCCCcEEeCCCC---CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG---HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++   .+||+|||+++........                                       
T Consensus       125 ~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------  165 (325)
T 3kn6_A          125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP---------------------------------------  165 (325)
T ss_dssp             TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------------------------
T ss_pred             CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc---------------------------------------
Confidence            6999999999999998665   7999999998543321110                                       


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-  157 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~-  157 (250)
                                                    ....++|+.|+|||++.+..++.++|||||||++|+|++|..||.+... 
T Consensus       166 ------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  215 (325)
T 3kn6_A          166 ------------------------------LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS  215 (325)
T ss_dssp             ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----
T ss_pred             ------------------------------ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                                          0123578999999999998999999999999999999999999986542 


Q ss_pred             ------HHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ------ELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ------~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                            .+.+..+..+...++..  ..++.++.+||.+||+.||++||+    +++++.||||++.
T Consensus       216 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~h~w~~~~  277 (325)
T 3kn6_A          216 LTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK----MSGLRYNEWLQDG  277 (325)
T ss_dssp             --CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC----TTTSTTCGGGCTT
T ss_pred             cccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC----HHHHhcChhhccC
Confidence                  34444444444333222  358999999999999999999999    9999999999874

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.95  E-value=7e-29  Score=210.67  Aligned_cols=144  Identities=25%  Similarity=0.406  Sum_probs=114.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  184 (326)
T 2x7f_A          148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-------------------------------------------  184 (326)
T ss_dssp             TTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------------------------------------------
T ss_pred             CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......||+.|+|||++.     +..++.++|||||||++|+|++|..||.+..
T Consensus       185 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  238 (326)
T 2x7f_A          185 --------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH  238 (326)
T ss_dssp             --------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             --------------------------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence                                      001236889999999987     4558999999999999999999999999888


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      .......+............++..+.+||.+||..||++||+    +++++.||||++..+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~  296 (326)
T 2x7f_A          239 PMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRDQPNE  296 (326)
T ss_dssp             HHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC----HHHHHTSHHHHCCTTH
T ss_pred             HHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCC----HHHHhhChHHhhCccc
Confidence            777776666554444445678999999999999999999999    9999999999987664

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=6.6e-29  Score=214.77  Aligned_cols=139  Identities=41%  Similarity=0.649  Sum_probs=115.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.......                                            
T Consensus       219 ~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~--------------------------------------------  254 (365)
T 2y7j_A          219 NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--------------------------------------------  254 (365)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--------------------------------------------
T ss_pred             CCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc--------------------------------------------
Confidence            699999999999999999999999999875433211                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC------CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG------EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                ......||+.|+|||++.+      ..++.++|||||||++|+|++|..||.+.
T Consensus       255 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  308 (365)
T 2y7j_A          255 --------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR  308 (365)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC
Confidence                                      0012368999999999863      34788999999999999999999999988


Q ss_pred             ChHHHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          156 DHELTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .....+..+......++.+  ..++..+.+||.+||+.||++||+    ++++++||||+.
T Consensus       309 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~r  365 (365)
T 2y7j_A          309 RQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFER  365 (365)
T ss_dssp             SHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCC
T ss_pred             CHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCcccCC
Confidence            8777777777665544322  467899999999999999999999    999999999973

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=6.5e-29  Score=214.51  Aligned_cols=138  Identities=28%  Similarity=0.476  Sum_probs=105.5

Q ss_pred             cceeecCCCCcEEeCC------CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            3 GIVYRDLKPENVLVRS------DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         3 giiHrDIKp~Nill~~------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      ||+||||||+|||++.      .+.+||+|||++......                                        
T Consensus       152 ~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----------------------------------------  191 (373)
T 1q8y_A          152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----------------------------------------  191 (373)
T ss_dssp             CEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----------------------------------------
T ss_pred             CEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC----------------------------------------
Confidence            9999999999999953      347999999988543211                                        


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                      .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus       192 --------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          192 --------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             --------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             --------------------------------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence                                            001258899999999999889999999999999999999999998654


Q ss_pred             ------hHHHHHHHHHhccCCCC----------------------------------------CCCCChHHHHHHHHhcc
Q 025601          157 ------HELTLANIVARALEFPK----------------------------------------EPAVPATAKDLISQLLA  190 (250)
Q Consensus       157 ------~~~~~~~i~~~~~~~p~----------------------------------------~~~~~~~~~~ll~~~L~  190 (250)
                            ....+.++....+..|.                                        +..++.++.+||.+||+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  319 (373)
T 1q8y_A          240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQ  319 (373)
T ss_dssp             -----CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGC
T ss_pred             ccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhc
Confidence                  33444444443322211                                        12345678899999999


Q ss_pred             cCccccCCCccChHHHhcCCCCCCCC
Q 025601          191 KDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       191 ~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .||++|||    ++++|+||||++..
T Consensus       320 ~dP~~Rpt----~~ell~hp~f~~~~  341 (373)
T 1q8y_A          320 LDPRKRAD----AGGLVNHPWLKDTL  341 (373)
T ss_dssp             SSTTTCBC----HHHHHTCGGGTTCT
T ss_pred             cCccccCC----HHHHhhChhhhccc
Confidence            99999999    99999999999853

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=3.5e-30  Score=223.55  Aligned_cols=132  Identities=19%  Similarity=0.308  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.....                                             
T Consensus       225 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------------------------------  259 (377)
T 3byv_A          225 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------------------------------  259 (377)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE---------------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEechhheecCCc---------------------------------------------
Confidence            69999999999999999999999999998532110                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-----------CCCchhHHHHHHHHHHHHHhCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-----------GHGSPVDWWTLGIFLFELFYGVT  150 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DiwSlG~vl~elltg~~  150 (250)
                                                 .....| +.|+|||++.+.           .++.++|||||||++|+|++|..
T Consensus       260 ---------------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~  311 (377)
T 3byv_A          260 ---------------------------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL  311 (377)
T ss_dssp             ---------------------------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------------------ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCC
Confidence                                       012357 899999999887           79999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          151 PFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       151 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ||.+.........+.      .....++.++.+||.+||+.||++||+    +.++++||||+++.
T Consensus       312 Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~f~~~~  367 (377)
T 3byv_A          312 PITKDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLL----PLQAMETPEYEQLR  367 (377)
T ss_dssp             CC------CCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCC----HHHHHTSHHHHHHH
T ss_pred             CCcccccccchhhhh------hhccCCCHHHHHHHHHHcCCCchhCCC----HHHHhhChHHHHHH
Confidence            997755433322221      123468999999999999999999999    99999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=1.6e-28  Score=205.09  Aligned_cols=138  Identities=31%  Similarity=0.534  Sum_probs=109.9

Q ss_pred             ccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++   .++.+||+|||++........                                        
T Consensus       143 ~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------  182 (285)
T 3is5_A          143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH----------------------------------------  182 (285)
T ss_dssp             TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------------------------------------------
T ss_pred             CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc----------------------------------------
Confidence            6899999999999994   457899999999854332110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++. ..++.++|||||||++|+|++|..||.+....
T Consensus       183 ------------------------------~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~  231 (285)
T 3is5_A          183 ------------------------------STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE  231 (285)
T ss_dssp             ----------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH
Confidence                                          01235889999999875 45899999999999999999999999998877


Q ss_pred             HHHHHHHHhccCCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .....+......... ...+++++.+||.+||+.||++||+    ++++++||||++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~f~~  284 (285)
T 3is5_A          232 EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPS----AAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCC----HHHHHTSGGGGC
T ss_pred             HHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHhhc
Confidence            776665554433322 2457899999999999999999999    999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=4.1e-29  Score=207.41  Aligned_cols=139  Identities=30%  Similarity=0.566  Sum_probs=116.8

Q ss_pred             ccceeecCCCCcEEe---CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLV---RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||++   +.++.+||+|||++........                                        
T Consensus       125 ~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------  164 (277)
T 3f3z_A          125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM----------------------------------------  164 (277)
T ss_dssp             TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred             CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc----------------------------------------
Confidence            689999999999999   6788999999998854332110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+....
T Consensus       165 ------------------------------~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  213 (277)
T 3f3z_A          165 ------------------------------MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS  213 (277)
T ss_dssp             ------------------------------BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence                                          0123589999999998765 899999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +....+.......+..  ..++..+.+||.+||+.||++||+    +.++++||||++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l~h~~~~~~  268 (277)
T 3f3z_A          214 EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHHH
T ss_pred             HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhcc
Confidence            8888887766554432  268999999999999999999999    9999999999863

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=9.5e-29  Score=211.43  Aligned_cols=141  Identities=29%  Similarity=0.487  Sum_probs=111.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       149 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------------  185 (335)
T 3dls_A          149 KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL-------------------------------------------  185 (335)
T ss_dssp             TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCC-------------------------------------------
T ss_pred             CCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCc-------------------------------------------
Confidence            6899999999999999999999999998854332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.....   
T Consensus       186 ---------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---  235 (335)
T 3dls_A          186 ---------------------------FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---  235 (335)
T ss_dssp             ---------------------------BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---
T ss_pred             ---------------------------eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---
Confidence                                       012368999999999998876 8899999999999999999999976321   


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC------CCccccccCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG------VNWALLRCTT  224 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~------~~~~~~~~~~  224 (250)
                         .....  ...+..++.++.+||.+||+.||++||+    ++++++||||++      .+|..+....
T Consensus       236 ---~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~~~~~~~~~~~~~~~  296 (335)
T 3dls_A          236 ---TVEAA--IHPPYLVSKELMSLVSGLLQPVPERRTT----LEKLVTDPWVTQPVNLADYTWEEVFRVN  296 (335)
T ss_dssp             ---GTTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHHCTTTTCCCCGGGCCHHHHC---
T ss_pred             ---HHhhc--cCCCcccCHHHHHHHHHHccCChhhCcC----HHHHhcCccccCCccccccCHHHHhhhc
Confidence               11222  2334468999999999999999999999    999999999975      4565554443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.95  E-value=2.3e-28  Score=204.31  Aligned_cols=135  Identities=21%  Similarity=0.401  Sum_probs=107.8

Q ss_pred             ceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            4 IVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         4 iiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      |+||||||+||+++ .++.+||+|||++.......                                             
T Consensus       152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------  186 (290)
T 1t4h_A          152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---------------------------------------------  186 (290)
T ss_dssp             CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS---------------------------------------------
T ss_pred             EEECCCCHHHEEEECCCCCEEEeeCCCcccccccc---------------------------------------------
Confidence            99999999999997 78999999999874322110                                             


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA  162 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~  162 (250)
                                                .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+........
T Consensus       187 --------------------------~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  239 (290)
T 1t4h_A          187 --------------------------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY  239 (290)
T ss_dssp             --------------------------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH
T ss_pred             --------------------------cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH
Confidence                                      002358899999998875 48999999999999999999999998866555554


Q ss_pred             HHHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          163 NIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       163 ~i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ..+... .........++++.+||.+||+.||++||+    ++++++||||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~f~~  288 (290)
T 1t4h_A          240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE  288 (290)
T ss_dssp             HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred             HHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCC----HHHHhhCccccc
Confidence            444333 222233457789999999999999999999    999999999986

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=9e-29  Score=221.52  Aligned_cols=140  Identities=33%  Similarity=0.549  Sum_probs=117.1

Q ss_pred             ccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++   .++.+||+|||++........                                        
T Consensus       140 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------  179 (486)
T 3mwu_A          140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK----------------------------------------  179 (486)
T ss_dssp             TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------------------------------------------
T ss_pred             CCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc----------------------------------------
Confidence            6999999999999995   456799999999854332110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    ....+||+.|+|||++.+. ++.++||||+||++|+|++|..||.+....
T Consensus       180 ------------------------------~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~  228 (486)
T 3mwu_A          180 ------------------------------MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (486)
T ss_dssp             --------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------cCCCcCCCCCCCHHHhCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                          0123689999999998864 899999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      +.+..+......++.+  ..++.++.+||.+||+.||++|||    +.++|+||||+...
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYS  284 (486)
T ss_dssp             HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHHHCHHHHHTC
T ss_pred             HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCHhhccCc
Confidence            8888887776554332  468999999999999999999999    99999999998754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.95  E-value=6.5e-29  Score=206.35  Aligned_cols=140  Identities=32%  Similarity=0.556  Sum_probs=91.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       131 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  168 (278)
T 3cok_A          131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK------------------------------------------  168 (278)
T ss_dssp             TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc------------------------------------------
Confidence            68999999999999999999999999988554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....||+.|+|||++.+..++.++|||||||++|+|++|..||........+
T Consensus       169 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  221 (278)
T 3cok_A          169 ---------------------------HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL  221 (278)
T ss_dssp             --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred             ---------------------------ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence                                       01235889999999999888899999999999999999999999877655555


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+.....  ..+..++.++.+||.+||+.||++||+    ++++++||||.+..
T Consensus       222 ~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~  270 (278)
T 3cok_A          222 NKVVLADY--EMPSFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFMSRNS  270 (278)
T ss_dssp             --CCSSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSTTTC---
T ss_pred             HHHhhccc--CCccccCHHHHHHHHHHcccCHhhCCC----HHHHhcCccccCCC
Confidence            44433322  334468999999999999999999999    99999999998744

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=6.7e-29  Score=222.83  Aligned_cols=142  Identities=35%  Similarity=0.559  Sum_probs=118.5

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.   ++.+||+|||++.......                                         
T Consensus       155 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-----------------------------------------  193 (494)
T 3lij_A          155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-----------------------------------------  193 (494)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-----------------------------------------
T ss_pred             CCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-----------------------------------------
Confidence            68999999999999975   4569999999985432211                                         


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   .....+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+....
T Consensus       194 -----------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  243 (494)
T 3lij_A          194 -----------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ  243 (494)
T ss_dssp             -----------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -----------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                         0112368999999998864 5899999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      +.+..+......++.+  ..++..+.+||.+||+.||++|||    ++++|+||||+.....
T Consensus       244 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~hp~~~~~~~~  301 (494)
T 3lij_A          244 EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIKEMCSK  301 (494)
T ss_dssp             HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCcc----HHHHhcCcccccCccc
Confidence            8888888776655443  468999999999999999999999    9999999999875443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=9.6e-29  Score=208.75  Aligned_cols=148  Identities=24%  Similarity=0.389  Sum_probs=114.5

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++ .++.+||+|||+++..........                                       
T Consensus       139 ~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~---------------------------------------  179 (320)
T 2i6l_A          139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG---------------------------------------  179 (320)
T ss_dssp             TTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC-----------------------------------------------
T ss_pred             CCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccccc---------------------------------------
Confidence            6899999999999997 567999999999865432110000                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 ......+|..|+|||++.+ ..++.++|||||||++|+|++|..||.+.....
T Consensus       180 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  232 (320)
T 2i6l_A          180 ---------------------------HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE  232 (320)
T ss_dssp             ---------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---------------------------ccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       0011257899999999876 568999999999999999999999999988777


Q ss_pred             HHHHHHHhccCC----------------------C------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          160 TLANIVARALEF----------------------P------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       160 ~~~~i~~~~~~~----------------------p------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      ....+.......                      +      ....++.++.+||.+||+.||++||+    ++++++|||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~  308 (320)
T 2i6l_A          233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT----AEEALSHPY  308 (320)
T ss_dssp             HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHTSHH
T ss_pred             HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC----HHHHhCCcc
Confidence            766665432111                      0      01358999999999999999999999    999999999


Q ss_pred             CCCCCccc
Q 025601          212 FQGVNWAL  219 (250)
Q Consensus       212 ~~~~~~~~  219 (250)
                      |+..+|+.
T Consensus       309 ~~~~~~p~  316 (320)
T 2i6l_A          309 MSIYSFPM  316 (320)
T ss_dssp             HHTTCC--
T ss_pred             cccccCcc
Confidence            99988764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.95  E-value=6.1e-29  Score=206.89  Aligned_cols=146  Identities=34%  Similarity=0.556  Sum_probs=118.5

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||+++.++    .+||+|||++........                                       
T Consensus       127 ~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------  167 (283)
T 3bhy_A          127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE---------------------------------------  167 (283)
T ss_dssp             TTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-------------------------------------------
T ss_pred             CCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc---------------------------------------
Confidence            6899999999999998776    899999998854332110                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                     .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus       168 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  216 (283)
T 3bhy_A          168 -------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK  216 (283)
T ss_dssp             -----------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             -------------------------------ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch
Confidence                                           0013588999999999988899999999999999999999999999887


Q ss_pred             HHHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          158 ELTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      ...+..+.......+.  ...++..+.+||.+||..||++||+    +.++++||||+.+++....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~~  278 (283)
T 3bhy_A          217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT----IAQSLEHSWIKAIRRRNVR  278 (283)
T ss_dssp             HHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHHCHHHHHHHHCCC-
T ss_pred             HHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcC----HHHHHhCHHHHHHHHHhhh
Confidence            7777776655443322  1467899999999999999999999    9999999999988765543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=1.1e-28  Score=217.19  Aligned_cols=144  Identities=35%  Similarity=0.567  Sum_probs=107.5

Q ss_pred             ccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.+   +.+||+|||+++.......                                        
T Consensus       258 ~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~----------------------------------------  297 (419)
T 3i6u_A          258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL----------------------------------------  297 (419)
T ss_dssp             TTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------------------------------------
T ss_pred             CCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc----------------------------------------
Confidence            689999999999999754   4599999999865432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                    ....+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.+.
T Consensus       298 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          298 ------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             -------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             ------------------------------ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence                                          012368999999999864   45789999999999999999999999876


Q ss_pred             ChHHHHHH-HHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          156 DHELTLAN-IVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       156 ~~~~~~~~-i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .....+.. +......+..  ...++..+.+||.+||+.||++||+    ++++|+||||++.+|..
T Consensus       348 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~~~  410 (419)
T 3i6u_A          348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMKR  410 (419)
T ss_dssp             SSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCCHHHHH
T ss_pred             cchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcC----HHHHhCCcccCChhHHH
Confidence            54433333 3333322211  1458999999999999999999999    99999999999887753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.95  E-value=7.6e-29  Score=210.42  Aligned_cols=149  Identities=25%  Similarity=0.465  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++...............                                   
T Consensus       183 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~-----------------------------------  227 (332)
T 3qd2_B          183 KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM-----------------------------------  227 (332)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC---------------------------------------------
T ss_pred             CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccc-----------------------------------
Confidence            699999999999999999999999999987655432211100000                                   


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                            ..........||+.|+|||++.+..++.++|||||||++|+|++|..|+..  .....
T Consensus       228 ----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~  283 (332)
T 3qd2_B          228 ----------------------PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRII  283 (332)
T ss_dssp             --------------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHH
T ss_pred             ----------------------cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHH
Confidence                                  000011234689999999999998899999999999999999998766521  11122


Q ss_pred             HHHHHhccCCCC-CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          162 ANIVARALEFPK-EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       162 ~~i~~~~~~~p~-~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ..+...  ..+. ....++++.+||.+||+.||++||+    ++++++||||+++
T Consensus       284 ~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~~l~~~~f~~~  332 (332)
T 3qd2_B          284 TDVRNL--KFPLLFTQKYPQEHMMVQDMLSPSPTERPE----ATDIIENAIFENL  332 (332)
T ss_dssp             HHHHTT--CCCHHHHHHCHHHHHHHHHHHCSSGGGSCC----HHHHHHSTTCCCC
T ss_pred             HHhhcc--CCCcccccCChhHHHHHHHHccCCCCcCCC----HHHHhhchhhhcC
Confidence            222211  1111 1245678899999999999999999    9999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.95  E-value=3.2e-28  Score=201.69  Aligned_cols=143  Identities=23%  Similarity=0.439  Sum_probs=112.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       124 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  161 (276)
T 2yex_A          124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE------------------------------------------  161 (276)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE------------------------------------------
T ss_pred             CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch------------------------------------------
Confidence            68999999999999999999999999987543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChH-H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHE-L  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~-~  159 (250)
                                               .......||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... .
T Consensus       162 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  216 (276)
T 2yex_A          162 -------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ  216 (276)
T ss_dssp             -------------------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH
T ss_pred             -------------------------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence                                     00112368899999999988765 78999999999999999999999876543 2


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ....+.......+....++..+.+||.+||+.||++|||    ++++++||||++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~  268 (276)
T 2yex_A          217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred             HHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCC----HHHHhcCccccCh
Confidence            333333333333334568999999999999999999999    9999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=3.9e-28  Score=201.33  Aligned_cols=137  Identities=30%  Similarity=0.497  Sum_probs=108.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.+||+|||++........                                           
T Consensus       130 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------  166 (276)
T 2h6d_A          130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF-------------------------------------------  166 (276)
T ss_dssp             HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----------------------------------------------
T ss_pred             CCCccCCCChhhEEECCCCCEEEeecccccccCCCcc-------------------------------------------
Confidence            5899999999999999999999999998754332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+..+ +.++|||||||++|+|++|..||.+......
T Consensus       167 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  219 (276)
T 2h6d_A          167 ---------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL  219 (276)
T ss_dssp             -------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------------------------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence                                       001257899999999988765 6899999999999999999999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      ...+.......  +..++..+.+||.+||+.||++||+    ++++++||||++
T Consensus       220 ~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps----~~~~l~h~~~~~  267 (276)
T 2h6d_A          220 FKKIRGGVFYI--PEYLNRSVATLLMHMLQVDPLKRAT----IKDIREHEWFKQ  267 (276)
T ss_dssp             HHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHT
T ss_pred             HHHhhcCcccC--chhcCHHHHHHHHHHccCChhhCCC----HHHHHhChhhcc
Confidence            76665554433  4468999999999999999999999    999999999976

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.95  E-value=2.3e-29  Score=221.13  Aligned_cols=132  Identities=21%  Similarity=0.335  Sum_probs=108.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.....                                             
T Consensus       230 ~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---------------------------------------------  264 (413)
T 3dzo_A          230 YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---------------------------------------------  264 (413)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE---------------------------------------------
T ss_pred             CCcccCCcccceEEEecCCeEEEEeccceeecCCc---------------------------------------------
Confidence            69999999999999999999999999997542211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCcee----------cCCCCCchhHHHHHHHHHHHHHhCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIV----------SGEGHGSPVDWWTLGIFLFELFYGVTP  151 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DiwSlG~vl~elltg~~p  151 (250)
                                                 ....+| +.|+|||++          .+..++.++|||||||++|+|++|+.|
T Consensus       265 ---------------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P  316 (413)
T 3dzo_A          265 ---------------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             ---------------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ---------------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence                                       012357 999999999          444578999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          152 FRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       152 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      |.+.........+      +.....++..+.+||.+||+.||++||+    +.++++||||+.+.
T Consensus       317 f~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dP~~Rpt----~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          317 NTDDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRLL----PLQAMETPEYEQLR  371 (413)
T ss_dssp             CCTTGGGSCSGGG------GSSCCCCCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHH
T ss_pred             CCCcchhhhHHHH------HhhcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHHHHH
Confidence            9876544333222      2233468999999999999999999999    99999999999764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=2.7e-28  Score=206.92  Aligned_cols=154  Identities=21%  Similarity=0.293  Sum_probs=109.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       156 ~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------------------  195 (323)
T 3qup_A          156 RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ----------------------------------------  195 (323)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred             CCcccCCCCcceEEEcCCCCEEEeeccccccccccccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       196 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  248 (323)
T 3qup_A          196 ---------------------------GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI  248 (323)
T ss_dssp             --------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---------------------------cccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH
Confidence                                       001246788999999999889999999999999999999 9999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc---ChHHHhcCCCCCCCCccccccC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK---GASAIKHHPFFQGVNWALLRCT  223 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~---~a~~ll~hp~~~~~~~~~~~~~  223 (250)
                      ...+.... ..+.+..++.++.+||.+||+.||++||++.+   .+++++.|+|+.+..+.-+...
T Consensus       249 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~~~  313 (323)
T 3qup_A          249 YNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYIN  313 (323)
T ss_dssp             HHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--------------
T ss_pred             HHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCCCC
Confidence            76665443 44556689999999999999999999999664   3577899999998776655443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=2.6e-28  Score=204.92  Aligned_cols=145  Identities=30%  Similarity=0.441  Sum_probs=116.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++......      ..                                     
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~-------------------------------------  172 (302)
T 2j7t_A          136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT------LQ-------------------------------------  172 (302)
T ss_dssp             TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH------HH-------------------------------------
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEECCCCcccccc------cc-------------------------------------
Confidence            68999999999999999999999999976321000      00                                     


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                ......||+.|+|||++.     +..++.++|||||||++|+|++|..||.+..
T Consensus       173 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  226 (302)
T 2j7t_A          173 --------------------------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN  226 (302)
T ss_dssp             --------------------------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             --------------------------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence                                      001236889999999984     5668999999999999999999999999988


Q ss_pred             hHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          157 HELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       157 ~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      .......+...... ......++..+.+||.+||+.||++|||    ++++++||||.++.|..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~  286 (302)
T 2j7t_A          227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS----AAQLLEHPFVSSITSNK  286 (302)
T ss_dssp             HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHTTSTTTTTCCCCH
T ss_pred             HHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCC----HHHHhcChHHhhhccch
Confidence            77777776665433 2234567899999999999999999999    99999999999988754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=1.6e-27  Score=201.58  Aligned_cols=134  Identities=24%  Similarity=0.334  Sum_probs=106.7

Q ss_pred             cc--ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LG--IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~g--iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|  |+||||||+||+++.++.+||+|||+++.......                                         
T Consensus       156 ~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~-----------------------------------------  194 (309)
T 3p86_A          156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL-----------------------------------------  194 (309)
T ss_dssp             SSSCCCCTTCCGGGEEECTTCCEEECCCC---------------------------------------------------
T ss_pred             CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc-----------------------------------------
Confidence            57  99999999999999999999999998853221100                                         


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus       195 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~  246 (309)
T 3p86_A          195 ----------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ  246 (309)
T ss_dssp             -----------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred             ----------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                        0112368999999999999889999999999999999999999999988887


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+.........+..++.++.+||.+||+.||++||+    ++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~  291 (309)
T 3p86_A          247 VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS----FATIMD  291 (309)
T ss_dssp             HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            777776666666667789999999999999999999999    777664

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=4.5e-28  Score=203.26  Aligned_cols=150  Identities=27%  Similarity=0.405  Sum_probs=108.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       140 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~----------------------------------------  179 (303)
T 2vwi_A          140 NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR----------------------------------------  179 (303)
T ss_dssp             TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-----------------------------------------------
T ss_pred             CCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccc----------------------------------------
Confidence            6899999999999999999999999998754332111000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                              ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+......
T Consensus       180 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  235 (303)
T 2vwi_A          180 ------------------------NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV  235 (303)
T ss_dssp             --------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH
T ss_pred             ------------------------hhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH
Confidence                                    000112368999999999876 4589999999999999999999999988776655


Q ss_pred             HHHHHHhccCC--------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          161 LANIVARALEF--------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       161 ~~~i~~~~~~~--------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      ...........        .....++..+.+||.+||+.||++||+    +++++.||||++..+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~  298 (303)
T 2vwi_A          236 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQKAKNKE  298 (303)
T ss_dssp             HHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSTTC-------
T ss_pred             HHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcC----HHHHhhChhhhcCCCCc
Confidence            55444432221        112457899999999999999999999    99999999999877644

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.95  E-value=6.5e-28  Score=203.67  Aligned_cols=146  Identities=27%  Similarity=0.482  Sum_probs=118.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+|+||||+||+++.++.+||+|||++........                                           
T Consensus       144 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  180 (314)
T 3com_A          144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-------------------------------------------  180 (314)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-------------------------------------------
T ss_pred             CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-------------------------------------------
Confidence            6899999999999999999999999998744322100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       181 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  234 (314)
T 3com_A          181 --------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAI  234 (314)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             --------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                                      011236889999999999888999999999999999999999999988766665


Q ss_pred             HHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcccc
Q 025601          162 ANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALL  220 (250)
Q Consensus       162 ~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~  220 (250)
                      ..+..... .+..+..++..+.+||.+||..||++||+    +.++++||||++..+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt----~~~ll~~~~~~~~~~~~~  290 (314)
T 3com_A          235 FMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT----ATQLLQHPFVRSAKGVSI  290 (314)
T ss_dssp             HHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHTCCCGGG
T ss_pred             HHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhcCCcchH
Confidence            55444322 22233457899999999999999999999    999999999998876543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=2.4e-28  Score=206.51  Aligned_cols=144  Identities=26%  Similarity=0.445  Sum_probs=111.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       135 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  173 (311)
T 3ork_A          135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV-----------------------------------------  173 (311)
T ss_dssp             TTCCCCCCCGGGEEEETTSCEEECCCSCC---------------------------------------------------
T ss_pred             CCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccccc-----------------------------------------
Confidence            689999999999999999999999999986543321100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       174 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~  228 (311)
T 3ork_A          174 -------------------------TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA  228 (311)
T ss_dssp             ---------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             -------------------------ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                                     0111246899999999999988999999999999999999999999998887777


Q ss_pred             HHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          162 ANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       162 ~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      .++.......+.  ...++.++.+||.+||+.||++||+    +.+++.|+|++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~~  280 (311)
T 3ork_A          229 YQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChh----hHHHHHHHHHHHh
Confidence            776655433221  2458999999999999999999999    8888999988753

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.95  E-value=4.2e-28  Score=218.11  Aligned_cols=139  Identities=27%  Similarity=0.457  Sum_probs=116.9

Q ss_pred             ccceeecCCCCcEEeCCCC---CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG---HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++   .+||+|||++.......                                         
T Consensus       165 ~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-----------------------------------------  203 (504)
T 3q5i_A          165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-----------------------------------------  203 (504)
T ss_dssp             TTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS-----------------------------------------
T ss_pred             CCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC-----------------------------------------
Confidence            6899999999999998765   69999999985432210                                         


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   .....+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+....
T Consensus       204 -----------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  253 (504)
T 3q5i_A          204 -----------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ  253 (504)
T ss_dssp             -----------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -----------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                         0112368999999999874 5899999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +.+..+..+...++..  ..++.++.+||.+||+.||++|||    ++++|+||||+..
T Consensus       254 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~~~  308 (504)
T 3q5i_A          254 DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCT----AEEALNSRWIKKY  308 (504)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHT
T ss_pred             HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCC----HHHHhcCHhhhhc
Confidence            8888887766554322  468999999999999999999999    9999999999864

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=1.4e-27  Score=198.16  Aligned_cols=138  Identities=25%  Similarity=0.413  Sum_probs=112.8

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      +|+||||||+||+++.++.+||+|||++..........                                          
T Consensus       136 ~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------  173 (279)
T 2w5a_A          136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA------------------------------------------  173 (279)
T ss_dssp             --CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHH------------------------------------------
T ss_pred             eeEEeccchhhEEEcCCCCEEEecCchheeeccccccc------------------------------------------
Confidence            39999999999999999999999999875433211100                                          


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA  162 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~  162 (250)
                                                 ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+........
T Consensus       174 ---------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  226 (279)
T 2w5a_A          174 ---------------------------KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG  226 (279)
T ss_dssp             ---------------------------HHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ---------------------------cccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH
Confidence                                       01257899999999999889999999999999999999999999888777776


Q ss_pred             HHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          163 NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       163 ~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+...... ..+..++.++.+||.+||+.||++||+    ++++++|+|+.+
T Consensus       227 ~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~~~~~~  273 (279)
T 2w5a_A          227 KIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLILE  273 (279)
T ss_dssp             HHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTCCG
T ss_pred             HHhhcccc-cCCcccCHHHHHHHHHHcCCCcccCCC----HHHHHhChhhhh
Confidence            66655432 344578999999999999999999999    999999999986

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=6.8e-28  Score=204.56  Aligned_cols=143  Identities=34%  Similarity=0.564  Sum_probs=111.1

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++.   +||+|||+++.........                                      
T Consensus       133 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~--------------------------------------  174 (322)
T 2ycf_A          133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR--------------------------------------  174 (322)
T ss_dssp             TTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHH--------------------------------------
T ss_pred             CCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccc--------------------------------------
Confidence            68999999999999987654   9999999986543221100                                      


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                      ...||+.|+|||++.   +..++.++|||||||++|+|++|..||.+.
T Consensus       175 --------------------------------~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          175 --------------------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             --------------------------------HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             --------------------------------cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence                                            125889999999974   455899999999999999999999999876


Q ss_pred             ChHHH-HHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          156 DHELT-LANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       156 ~~~~~-~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                      ..... ...+.........  ...++..+.+||.+||+.||++||+    ++++++||||++.+|.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~~~l~h~~~~~~~~~  284 (322)
T 2ycf_A          223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMK  284 (322)
T ss_dssp             TCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGCCHHHH
T ss_pred             chHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC----HHHHhhCcCcCCHHHH
Confidence            54322 3333333322211  1457999999999999999999999    9999999999988774

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=1.6e-27  Score=200.44  Aligned_cols=140  Identities=28%  Similarity=0.401  Sum_probs=116.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       138 ~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  174 (303)
T 3a7i_A          138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-------------------------------------------  174 (303)
T ss_dssp             TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-------------------------------------------
T ss_pred             CCCccCCCChheEEECCCCCEEEeecccceecCcccc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       175 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  228 (303)
T 3a7i_A          175 --------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL  228 (303)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             --------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence                                      011236889999999999888999999999999999999999999988777666


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ..+.... .......++..+.+||.+||+.||++||+    +++++.||||...
T Consensus       229 ~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~  277 (303)
T 3a7i_A          229 FLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFILRN  277 (303)
T ss_dssp             HHHHHSC-CCCCCSSCCHHHHHHHHHHCCSSGGGSCC----HHHHTTCHHHHHH
T ss_pred             HHhhcCC-CCCCccccCHHHHHHHHHHcCCChhhCcC----HHHHhhChhhhcC
Confidence            5554433 33344578999999999999999999999    9999999999653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=6.1e-28  Score=201.57  Aligned_cols=141  Identities=33%  Similarity=0.523  Sum_probs=115.6

Q ss_pred             ccceeecCCCCcEEeCCC---CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSD---GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.+   +.+||+|||++........                                        
T Consensus       140 ~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------  179 (287)
T 2wei_A          140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK----------------------------------------  179 (287)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS----------------------------------------
T ss_pred             CCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc----------------------------------------
Confidence            689999999999999754   4699999998754322100                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+....
T Consensus       180 ------------------------------~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  228 (287)
T 2wei_A          180 ------------------------------MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (287)
T ss_dssp             ------------------------------CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence                                          0112578899999998764 899999999999999999999999998888


Q ss_pred             HHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          159 LTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      .....+.......+.  ...++.++.+||.+||+.||++|||    ++++++||||++..|
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~  285 (287)
T 2wei_A          229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYSS  285 (287)
T ss_dssp             HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHHHCC
T ss_pred             HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcC----HHHHhcCHHHhcccc
Confidence            777777766544332  2568999999999999999999999    999999999987654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=201.58  Aligned_cols=141  Identities=26%  Similarity=0.456  Sum_probs=107.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       144 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------  180 (318)
T 2dyl_A          144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA-------------------------------------------  180 (318)
T ss_dssp             HCCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------------------------------
T ss_pred             CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-------------------------------------------
Confidence            4899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                 .....+|+.|+|||++.     +..++.++|||||||++|+|++|..||....
T Consensus       181 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (318)
T 2dyl_A          181 ---------------------------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK  233 (318)
T ss_dssp             ---------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ---------------------------ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC
Confidence                                       00125889999999985     4457899999999999999999999998744


Q ss_pred             -hHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          157 -HELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       157 -~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                       ....+..+...... .+....++..+.+||.+||+.||++||+    ++++++||||++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          234 TDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPK----YNKLLEHSFIKRYE  291 (318)
T ss_dssp             SHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHHHH
T ss_pred             ccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcC----HHHHhhCHHHHhcc
Confidence             44555555554332 3333468999999999999999999999    99999999998653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=8.8e-28  Score=212.21  Aligned_cols=144  Identities=31%  Similarity=0.469  Sum_probs=103.6

Q ss_pred             ccceeecCCCCcEEeCC---C--CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---D--GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~--~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +|||||||||+||+++.   +  ..+||+|||+++.........                                    
T Consensus       137 ~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~------------------------------------  180 (432)
T 3p23_A          137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF------------------------------------  180 (432)
T ss_dssp             TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------------------------------------------
T ss_pred             CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce------------------------------------
Confidence            68999999999999953   2  357899999986543221100                                    


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHh-CCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFY-GVTPF  152 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~ellt-g~~pf  152 (250)
                                                    .......||+.|+|||++.+   ..++.++|||||||++|+|++ |..||
T Consensus       181 ------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf  230 (432)
T 3p23_A          181 ------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF  230 (432)
T ss_dssp             -----------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTT
T ss_pred             ------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence                                          00112468999999999984   457889999999999999999 99999


Q ss_pred             CCCChHHHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCc
Q 025601          153 RGVDHELTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW  217 (250)
Q Consensus       153 ~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~  217 (250)
                      .........  +.........   ....+..+.+||.+||+.||++||+    ++++++||||.+++|
T Consensus       231 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~evl~hp~f~~~~~  292 (432)
T 3p23_A          231 GKSLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS----AKHVLKHPFFWSLEK  292 (432)
T ss_dssp             BSTTTHHHH--HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC----HHHHHTSTTTCCHHH
T ss_pred             chhhHHHHH--HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC----HHHHHhCccccChHH
Confidence            665443332  2222222111   1223455889999999999999999    999999999999887

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.94  E-value=2.1e-27  Score=209.94  Aligned_cols=143  Identities=30%  Similarity=0.484  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCC-------------CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCc
Q 025601            2 LGIVYRDLKPENVLVRSD-------------GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSAS   68 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~-------------~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (250)
                      +||+||||||+|||++.+             +.+||+|||+++..........                           
T Consensus       134 ~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~---------------------------  186 (434)
T 2rio_A          134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR---------------------------  186 (434)
T ss_dssp             TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC---------------------------------
T ss_pred             CCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccce---------------------------
Confidence            699999999999999754             4799999999866443211000                           


Q ss_pred             cccCCCCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-------CCCCchhHHHHHHHH
Q 025601           69 CIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-------EGHGSPVDWWTLGIF  141 (250)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~v  141 (250)
                                                            .......||+.|+|||++.+       ..++.++|||||||+
T Consensus       187 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~i  228 (434)
T 2rio_A          187 --------------------------------------TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV  228 (434)
T ss_dssp             ----------------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHH
T ss_pred             --------------------------------------eeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHH
Confidence                                                  00012368999999999976       558999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHHhccCCCCCC-----CCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          142 LFELFY-GVTPFRGVDHELTLANIVARALEFPKEP-----AVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       142 l~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~-----~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +|+|++ |..||.+.....  ..++......+...     .++.++.+||.+||+.||++||+    +.++++||||...
T Consensus       229 l~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~hp~f~~~  302 (434)
T 2rio_A          229 FYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT----AMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSCH
T ss_pred             HHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCC----HHHHHhCCccCCc
Confidence            999998 999997665443  34455444433321     23478999999999999999999    9999999999753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=4e-28  Score=207.53  Aligned_cols=139  Identities=32%  Similarity=0.491  Sum_probs=88.9

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.   ++.+||+|||+++.......                                        
T Consensus       147 ~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------  186 (336)
T 3fhr_A          147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL----------------------------------------  186 (336)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------------------------
T ss_pred             CCeecCCCCHHHEEEEecCCCceEEEeccccceecccccc----------------------------------------
Confidence            68999999999999976   45699999998854321110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                     ....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       187 -------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  235 (336)
T 3fhr_A          187 -------------------------------QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ  235 (336)
T ss_dssp             ------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred             -------------------------------ccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch
Confidence                                           0125789999999998888899999999999999999999999776544


Q ss_pred             HHH----HHHHHhccC--CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTL----ANIVARALE--FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~----~~i~~~~~~--~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ...    ..+......  .+....++.++.+||.+||+.||++|||    ++++++||||.+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~  294 (336)
T 3fhr_A          236 AISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWINQS  294 (336)
T ss_dssp             ---------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHHSHHHHTG
T ss_pred             hhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCcccccc
Confidence            331    222222222  2233578999999999999999999999    9999999999873

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=1e-27  Score=203.52  Aligned_cols=134  Identities=30%  Similarity=0.506  Sum_probs=109.2

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++ .++.+||+|||++.......                                           
T Consensus       168 ~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~-------------------------------------------  204 (320)
T 3a99_A          168 CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-------------------------------------------  204 (320)
T ss_dssp             TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC-------------------------------------------
T ss_pred             CCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc-------------------------------------------
Confidence            6899999999999998 67899999999875432210                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||....   
T Consensus       205 ----------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~---  253 (320)
T 3a99_A          205 ----------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---  253 (320)
T ss_dssp             ----------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred             ----------------------------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---
Confidence                                        012358899999999987765 788999999999999999999997532   


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                         .+......  ....++.++.+||.+||+.||++||+    ++++++||||+++.+.
T Consensus       254 ---~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~  303 (320)
T 3a99_A          254 ---EIIRGQVF--FRQRVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVLLP  303 (320)
T ss_dssp             ---HHHHCCCC--CSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCCCH
T ss_pred             ---hhhccccc--ccccCCHHHHHHHHHHccCChhhCcC----HHHHhcCHhhcCccCc
Confidence               23333322  34578999999999999999999999    9999999999998654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.94  E-value=1e-27  Score=206.07  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=112.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       212 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------  249 (359)
T 3vhe_A          212 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------------------  249 (359)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC------------------------------------------
T ss_pred             CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc------------------------------------------
Confidence            68999999999999999999999999998654321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       250 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  304 (359)
T 3vhe_A          250 -------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  304 (359)
T ss_dssp             -------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             -------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH
Confidence                                     00112357899999999999889999999999999999998 9999998876666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +...+........+..++.++.+||.+||+.||++||+    ++++++|
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~  349 (359)
T 3vhe_A          305 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  349 (359)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHHH
Confidence            66666666666667789999999999999999999999    7777654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1.6e-27  Score=201.35  Aligned_cols=142  Identities=30%  Similarity=0.506  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++ ++.+||+|||++..........                                         
T Consensus       146 ~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~-----------------------------------------  183 (313)
T 3cek_A          146 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV-----------------------------------------  183 (313)
T ss_dssp             TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------------------------------------------------
T ss_pred             CCceecCCCcccEEEE-CCeEEEeeccccccccCccccc-----------------------------------------
Confidence            6899999999999995 5899999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-----------CCCCchhHHHHHHHHHHHHHhCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-----------EGHGSPVDWWTLGIFLFELFYGVT  150 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~vl~elltg~~  150 (250)
                                                ......||+.|+|||++.+           ..++.++|||||||++|+|++|..
T Consensus       184 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~  237 (313)
T 3cek_A          184 --------------------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT  237 (313)
T ss_dssp             --------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------------------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCC
Confidence                                      0012358999999999876           357899999999999999999999


Q ss_pred             CCCCCChH-HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          151 PFRGVDHE-LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       151 pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ||...... ..+..++........+...+..+.+||.+||+.||++||+    ++++++||||+..
T Consensus       238 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~~~~~  299 (313)
T 3cek_A          238 PFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ  299 (313)
T ss_dssp             TTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHCC
T ss_pred             chhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC----HHHHhcCccccCC
Confidence            99876433 3444455444444555567899999999999999999999    9999999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=2.2e-27  Score=198.46  Aligned_cols=142  Identities=27%  Similarity=0.441  Sum_probs=109.9

Q ss_pred             ccceeecCCCCcEEeCC-CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~-~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++. ++.+||+|||++........                                          
T Consensus       141 ~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------  178 (295)
T 2clq_A          141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------  178 (295)
T ss_dssp             TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---------------------------------------------
T ss_pred             CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC------------------------------------------
Confidence            68999999999999987 89999999998855332110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                 ......||+.|+|||++.+..  ++.++|||||||++|+|++|..||.+....
T Consensus       179 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  231 (295)
T 2clq_A          179 ---------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP  231 (295)
T ss_dssp             -----------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH
T ss_pred             ---------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch
Confidence                                       001235889999999997643  789999999999999999999999765433


Q ss_pred             HH-HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LT-LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~-~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .. .............+..++.++.+||.+||+.||++||+    +++++.||||+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~  286 (295)
T 2clq_A          232 QAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRAC----ANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCC----HHHHHTSGGGCC--
T ss_pred             hHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhhcc
Confidence            32 22222223333445678999999999999999999999    99999999998754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=1.6e-27  Score=202.68  Aligned_cols=135  Identities=16%  Similarity=0.236  Sum_probs=107.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.........                                         
T Consensus       134 ~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  172 (325)
T 3kex_A          134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL-----------------------------------------  172 (325)
T ss_dssp             TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC-----------------------------------------
T ss_pred             CCCCCCccchheEEECCCCeEEECCCCcccccCcccccc-----------------------------------------
Confidence            689999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       173 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  226 (325)
T 3kex_A          173 --------------------------LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV  226 (325)
T ss_dssp             --------------------------C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH
T ss_pred             --------------------------cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH
Confidence                                      0012357789999999998889999999999999999999 9999998776666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+. .......+..++..+.+||.+||+.||++||+    ++++++
T Consensus       227 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~el~~  269 (325)
T 3kex_A          227 PDLLE-KGERLAQPQICTIDVYMVMVKCWMIDENIRPT----FKELAN  269 (325)
T ss_dssp             HHHHH-TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCC----HHHHHH
T ss_pred             HHHHH-cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            55544 44445556678999999999999999999999    555544

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=3e-27  Score=196.46  Aligned_cols=95  Identities=21%  Similarity=0.253  Sum_probs=75.4

Q ss_pred             ccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhccc
Q 025601          113 VGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAK  191 (250)
Q Consensus       113 ~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~  191 (250)
                      .||+.|+|||++.+. .++.++|||||||++|+|++|..++....   ....+..... ...+..++..+.+||.+||+.
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~  266 (289)
T 1x8b_A          191 EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRL-PRIPQVLSQEFTELLKVMIHP  266 (289)
T ss_dssp             CCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCC-CCCSSCCCHHHHHHHHHHTCS
T ss_pred             CCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCC-CCCCcccCHHHHHHHHHHhCC
Confidence            478999999999876 46789999999999999999988775543   2333333332 233457899999999999999


Q ss_pred             CccccCCCccChHHHhcCCCCCCC
Q 025601          192 DPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       192 dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      ||++||+    +.++++||||.+.
T Consensus       267 dp~~Rps----~~~ll~h~~~~~~  286 (289)
T 1x8b_A          267 DPERRPS----AMALVKHSVLLSA  286 (289)
T ss_dssp             SGGGSCC----HHHHHTCTTC---
T ss_pred             CcccCCC----HHHHhhChHhhhh
Confidence            9999999    9999999999874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.94  E-value=4.7e-27  Score=203.55  Aligned_cols=135  Identities=19%  Similarity=0.305  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       222 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------------------------------------------  259 (370)
T 2psq_A          222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------------------  259 (370)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT------------------------------------------
T ss_pred             CCeeccccchhhEEECCCCCEEEccccCCcccCcccce------------------------------------------
Confidence            68999999999999999999999999998644321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       260 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~  314 (370)
T 2psq_A          260 -------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  314 (370)
T ss_dssp             -------------------------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             -------------------------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                                     00111246789999999999889999999999999999999 9999998887666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.. ......+..++.++.+||.+||+.||++||+    ++++++
T Consensus       315 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt----~~ell~  357 (370)
T 2psq_A          315 FKLLKE-GHRMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVE  357 (370)
T ss_dssp             HHHHHT-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            655443 3344556679999999999999999999999    666654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.94  E-value=7.1e-28  Score=204.78  Aligned_cols=142  Identities=30%  Similarity=0.455  Sum_probs=92.8

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+||+++.++.+||+|||+++.......                                            
T Consensus       146 ~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------  181 (327)
T 3aln_A          146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--------------------------------------------  181 (327)
T ss_dssp             SCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------------------------
T ss_pred             CEeECCCCHHHEEEcCCCCEEEccCCCceecccccc--------------------------------------------
Confidence            899999999999999999999999999855432110                                            


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCcee----cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIV----SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                .....||+.|+|||++    .+..++.++|||||||++|+|++|..||.+....
T Consensus       182 --------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  235 (327)
T 3aln_A          182 --------------------------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV  235 (327)
T ss_dssp             --------------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---
T ss_pred             --------------------------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH
Confidence                                      0012588999999998    4556899999999999999999999999875432


Q ss_pred             -HHHHHHHHhccC-C--CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCcc
Q 025601          159 -LTLANIVARALE-F--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWA  218 (250)
Q Consensus       159 -~~~~~i~~~~~~-~--p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~  218 (250)
                       +.+..+...... .  .....++..+.+||.+||+.||++||+    ++++++||||...++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~~  295 (327)
T 3aln_A          236 FDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK----YKELLKHPFILMYEER  295 (327)
T ss_dssp             ----CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHHHS
T ss_pred             HHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcC----HHHHHhChHHHHhHhh
Confidence             222222221111 1  112358899999999999999999999    9999999999876654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=3.2e-27  Score=197.45  Aligned_cols=157  Identities=18%  Similarity=0.288  Sum_probs=111.9

Q ss_pred             ccceeecCCCCcEEe---CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLV---RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||++   +.++.+||+|||+++...........                                    
T Consensus       124 ~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~------------------------------------  167 (296)
T 4hgt_A          124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI------------------------------------  167 (296)
T ss_dssp             TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC------------------------------------
T ss_pred             CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccC------------------------------------
Confidence            689999999999999   68899999999998654332110000                                    


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       168 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  221 (296)
T 4hgt_A          168 --------------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA  221 (296)
T ss_dssp             --------------------------CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred             --------------------------CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh
Confidence                                      000111346899999999999988999999999999999999999999875422


Q ss_pred             ---HHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHH------hcCCCCCCCCcccc
Q 025601          159 ---LTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAI------KHHPFFQGVNWALL  220 (250)
Q Consensus       159 ---~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l------l~hp~~~~~~~~~~  220 (250)
                         ..+..+.......+.   ...++..+.+||.+||+.||++||++.+.++.+      ....|-..++|..+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~  295 (296)
T 4hgt_A          222 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML  295 (296)
T ss_dssp             SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred             hhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhhc
Confidence               233333333322221   246799999999999999999999944322211      11466667788765

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=7.8e-27  Score=195.40  Aligned_cols=139  Identities=19%  Similarity=0.276  Sum_probs=103.6

Q ss_pred             CccceeecCCCCcEEeCCCCC-----eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~-----~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      ++||+||||||+||+++.++.     +||+|||+++...........                                 
T Consensus       124 ~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---------------------------------  170 (298)
T 1csn_A          124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI---------------------------------  170 (298)
T ss_dssp             TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC---------------------------------
T ss_pred             hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccc---------------------------------
Confidence            479999999999999987765     999999998654332110000                                 


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       171 -----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          171 -----------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             -----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             -----------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence                                         000112346899999999999988999999999999999999999999874


Q ss_pred             ---ChHHHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          156 ---DHELTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       156 ---~~~~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                         .....+..+.......+.   ...++.++.+||.+||+.||++||++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~  273 (298)
T 1csn_A          222 KAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY  273 (298)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred             hccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHH
Confidence               344444444433322221   2368999999999999999999999444

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=3.5e-27  Score=199.86  Aligned_cols=149  Identities=20%  Similarity=0.307  Sum_probs=117.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       157 ~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  194 (322)
T 1p4o_A          157 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------------  194 (322)
T ss_dssp             TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE------------------------------------------
T ss_pred             CCCccCCCccceEEEcCCCeEEECcCcccccccccccc------------------------------------------
Confidence            68999999999999999999999999988543211100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       195 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  249 (322)
T 1p4o_A          195 -------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV  249 (322)
T ss_dssp             -------------------------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred             -------------------------ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence                                     00011257889999999998889999999999999999999 8999999887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC------CCCCCCCcccccc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH------PFFQGVNWALLRC  222 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h------p~~~~~~~~~~~~  222 (250)
                      ...+..... .+.+..++..+.+||.+||+.||++||+    +.+++.+      ++|+.++|.....
T Consensus       250 ~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~e~l~~L~~~~~~~~~~~~~~~~~~  312 (322)
T 1p4o_A          250 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPS----FLEIISSIKEEMEPGFREVSFYYSEE  312 (322)
T ss_dssp             HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHGGGSCTTHHHHCSTTSTT
T ss_pred             HHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcC----HHHHHHHHHHhhccCCcccccccccc
Confidence            766655433 3445678999999999999999999999    5555544      7887777665443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3e-27  Score=202.15  Aligned_cols=137  Identities=21%  Similarity=0.314  Sum_probs=113.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       191 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------------  228 (344)
T 1rjb_A          191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY------------------------------------------  228 (344)
T ss_dssp             TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS------------------------------------------
T ss_pred             CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccc------------------------------------------
Confidence            69999999999999999999999999998543211100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       229 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          229 -------------------------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             -------------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             -------------------------eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence                                     00112357889999999998889999999999999999998 9999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +..++......+.+..++.++.+||.+||..||++||+    +.+++.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~~  328 (344)
T 1rjb_A          284 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF  328 (344)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHHH
Confidence            77777776666667789999999999999999999999    7777654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=9.1e-27  Score=198.33  Aligned_cols=155  Identities=21%  Similarity=0.285  Sum_probs=109.8

Q ss_pred             ccceeecCCCCcEEeCCCCC-----eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIV   76 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~-----~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (250)
                      +||+||||||+|||++.++.     +||+|||+++...........                                  
T Consensus       124 ~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~----------------------------------  169 (330)
T 2izr_A          124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI----------------------------------  169 (330)
T ss_dssp             TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC----------------------------------
T ss_pred             CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc----------------------------------
Confidence            68999999999999998877     999999998654322110000                                  


Q ss_pred             CCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           77 PAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                  .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus       170 ----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          170 ----------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             ----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ----------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence                                        0001123479999999999999989999999999999999999999998743


Q ss_pred             ---hHHHHHHHHHhccCCCC---CCCCChHHHHHHHHhcccCccccCCCccChHHH------hcCCCCCCCCccc
Q 025601          157 ---HELTLANIVARALEFPK---EPAVPATAKDLISQLLAKDPERRLGSTKGASAI------KHHPFFQGVNWAL  219 (250)
Q Consensus       157 ---~~~~~~~i~~~~~~~p~---~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l------l~hp~~~~~~~~~  219 (250)
                         ..+.+..+.......+.   ...+| ++.+||..||..||.+||++.+..+.+      +...+....+|..
T Consensus       222 ~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~  295 (330)
T 2izr_A          222 ADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG  295 (330)
T ss_dssp             CSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred             cccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence               33444444433332221   12355 999999999999999999944422211      1234455778873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.94  E-value=7e-27  Score=208.96  Aligned_cols=159  Identities=18%  Similarity=0.289  Sum_probs=117.0

Q ss_pred             ccceeecCCCCcEEe---CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLV---RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill---~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +|||||||||+|||+   +.++.+||+|||+++...........                                    
T Consensus       122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~------------------------------------  165 (483)
T 3sv0_A          122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI------------------------------------  165 (483)
T ss_dssp             TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC------------------------------------
T ss_pred             CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccc------------------------------------
Confidence            699999999999999   57899999999998654432111000                                    


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH-  157 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~-  157 (250)
                                                .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... 
T Consensus       166 --------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~  219 (483)
T 3sv0_A          166 --------------------------PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG  219 (483)
T ss_dssp             --------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred             --------------------------ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch
Confidence                                      00011134799999999999999999999999999999999999999987543 


Q ss_pred             --HHHHHHHHHhccCCC---CCCCCChHHHHHHHHhcccCccccCCCccChH------HHhcCCCCCCCCcccccc
Q 025601          158 --ELTLANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGAS------AIKHHPFFQGVNWALLRC  222 (250)
Q Consensus       158 --~~~~~~i~~~~~~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~------~ll~hp~~~~~~~~~~~~  222 (250)
                        ...+..+........   ....++.++.+||.+||+.+|++||++.+..+      .-+.++|+..++|..+..
T Consensus       220 ~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~  295 (483)
T 3sv0_A          220 TKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKY  295 (483)
T ss_dssp             SHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC
T ss_pred             hHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhcc
Confidence              333444333322111   11468999999999999999999999554322      123479999999987644

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=3.2e-27  Score=203.93  Aligned_cols=159  Identities=12%  Similarity=0.106  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeC--CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVR--SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~--~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|||||||||+|||++  .++.+||+|||+++...........                                     
T Consensus       171 ~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~-------------------------------------  213 (364)
T 3op5_A          171 HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-------------------------------------  213 (364)
T ss_dssp             TTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCS-------------------------------------
T ss_pred             CCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCccccc-------------------------------------
Confidence            6999999999999999  7899999999998654422110000                                     


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus       214 -------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          214 -------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             -------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             -------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence                                     0001123469999999999999889999999999999999999999998643222


Q ss_pred             HHHHHHHhcc---------CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH------hcCCCCCCCCcccccc
Q 025601          160 TLANIVARAL---------EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI------KHHPFFQGVNWALLRC  222 (250)
Q Consensus       160 ~~~~i~~~~~---------~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l------l~hp~~~~~~~~~~~~  222 (250)
                      ..........         .......++.++.+||..||+.||++||++.+..+.+      +...+-..++|.....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~~~~  346 (364)
T 3op5_A          269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVEN  346 (364)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC-----
T ss_pred             HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccceEeccC
Confidence            2111111000         0011246899999999999999999999955432221      1235666778876543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=1.2e-26  Score=191.79  Aligned_cols=130  Identities=28%  Similarity=0.522  Sum_probs=106.7

Q ss_pred             ceeecCCCCcEEeCC--------CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            4 IVYRDLKPENVLVRS--------DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         4 iiHrDIKp~Nill~~--------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      |+||||||+||+++.        ++.+||+|||++........                                     
T Consensus       129 i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------  171 (271)
T 3dtc_A          129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-------------------------------------  171 (271)
T ss_dssp             CCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------------------------------------
T ss_pred             eeecCCchHHEEEecccccccccCcceEEccCCcccccccccc-------------------------------------
Confidence            999999999999985        67899999998854322110                                     


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                        ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       172 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  217 (271)
T 3dtc_A          172 ----------------------------------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI  217 (271)
T ss_dssp             --------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             ----------------------------------cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                                              0125889999999999888999999999999999999999999998


Q ss_pred             ChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          156 DHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ........+.......+.+..++..+.+||.+||+.||++||+    ++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~  266 (271)
T 3dtc_A          218 DGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPS----FTNILD  266 (271)
T ss_dssp             CHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             CHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHHH
Confidence            8888777777776666777789999999999999999999999    777765

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=3.8e-27  Score=200.60  Aligned_cols=136  Identities=21%  Similarity=0.314  Sum_probs=108.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.........                                         
T Consensus       136 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  174 (327)
T 3poz_A          136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY-----------------------------------------  174 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------------------------------------------
T ss_pred             CCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc-----------------------------------------
Confidence            689999999999999999999999999885432211100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       175 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  228 (327)
T 3poz_A          175 --------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             -------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             --------------------------cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH
Confidence                                      0011246789999999999999999999999999999999 9999998776655


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .. ++......+.+..++..+.+|+.+||+.||++||+    +++++.+
T Consensus       229 ~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~  272 (327)
T 3poz_A          229 SS-ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE  272 (327)
T ss_dssp             HH-HHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCC----HHHHHHH
T ss_pred             HH-HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCC----HHHHHHH
Confidence            44 44555556667789999999999999999999999    6665543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.93  E-value=9.8e-27  Score=196.38  Aligned_cols=132  Identities=32%  Similarity=0.515  Sum_probs=106.5

Q ss_pred             ccceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++ .++.+||+|||++.......                                           
T Consensus       158 ~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------  194 (312)
T 2iwi_A          158 RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-------------------------------------------  194 (312)
T ss_dssp             HTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-------------------------------------------
T ss_pred             CCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-------------------------------------------
Confidence            5899999999999999 78999999999875433211                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....||..|+|||++.+..+ +.++|||||||++|+|++|..||.+..   
T Consensus       195 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---  243 (312)
T 2iwi_A          195 ----------------------------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---  243 (312)
T ss_dssp             ----------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred             ----------------------------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---
Confidence                                        012358899999999987665 458999999999999999999997531   


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                         .+......+  ...++..+.+||.+||+.||++||+    ++++++||||+...
T Consensus       244 ---~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          244 ---EILEAELHF--PAHVSPDCCALIRRCLAPKPSSRPS----LEEILLDPWMQTPA  291 (312)
T ss_dssp             ---HHHHTCCCC--CTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSTTTCC--
T ss_pred             ---HHhhhccCC--cccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhcCch
Confidence               233333333  3468999999999999999999999    99999999999854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.93  E-value=8.1e-27  Score=196.60  Aligned_cols=136  Identities=23%  Similarity=0.371  Sum_probs=112.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       164 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  201 (313)
T 1t46_A          164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY------------------------------------------  201 (313)
T ss_dssp             TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS------------------------------------------
T ss_pred             CCeecCCCccceEEEcCCCCEEEccccccccccccccc------------------------------------------
Confidence            68999999999999999999999999988554322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       202 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  256 (313)
T 1t46_A          202 -------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (313)
T ss_dssp             -------------------------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             -------------------------eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence                                     00012357789999999998889999999999999999998 9999998877666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...++........+..++..+.+||.+||+.||++||+    ++++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~  300 (313)
T 1t46_A          257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQ  300 (313)
T ss_dssp             HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence            76777766666666789999999999999999999999    766664

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=7.7e-27  Score=196.98  Aligned_cols=137  Identities=20%  Similarity=0.335  Sum_probs=110.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       167 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  204 (316)
T 2xir_A          167 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------------------  204 (316)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------------------------------------------
T ss_pred             CCcccccCccceEEECCCCCEEECCCccccccccCccc------------------------------------------
Confidence            68999999999999999999999999998554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       205 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  259 (316)
T 2xir_A          205 -------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  259 (316)
T ss_dssp             -------------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH
T ss_pred             -------------------------eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH
Confidence                                     00112357889999999998889999999999999999998 9999988776555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +...+........+..++..+.++|.+||+.||++||+    +++++.|
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~  304 (316)
T 2xir_A          260 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  304 (316)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence            55555555555566678999999999999999999999    7777754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.93  E-value=5.1e-26  Score=189.65  Aligned_cols=131  Identities=24%  Similarity=0.381  Sum_probs=103.6

Q ss_pred             cc--ceeecCCCCcEEeCCCCC-----eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCC
Q 025601            2 LG--IVYRDLKPENVLVRSDGH-----IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNC   74 (250)
Q Consensus         2 ~g--iiHrDIKp~Nill~~~~~-----~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (250)
                      +|  |+||||||+||+++.++.     +||+|||+++.....                                      
T Consensus       141 ~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------  182 (287)
T 4f0f_A          141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS--------------------------------------  182 (287)
T ss_dssp             SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC--------------------------------------
T ss_pred             CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc--------------------------------------
Confidence            56  999999999999987776     999999987532211                                      


Q ss_pred             CCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 025601           75 IVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPF  152 (250)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf  152 (250)
                                                        .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||
T Consensus       183 ----------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  228 (287)
T 4f0f_A          183 ----------------------------------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF  228 (287)
T ss_dssp             ----------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ----------------------------------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence                                              012368999999999843  44789999999999999999999999


Q ss_pred             CCCChHH--HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          153 RGVDHEL--TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       153 ~~~~~~~--~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+.....  ....+.........+..++..+.+||.+||+.||++||+    ++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~  282 (287)
T 4f0f_A          229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH----FSYIVK  282 (287)
T ss_dssp             TTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             ccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence            8765333  244445555555566789999999999999999999999    666653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=3.6e-26  Score=191.34  Aligned_cols=156  Identities=26%  Similarity=0.432  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.................                                  
T Consensus       135 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~----------------------------------  180 (303)
T 1zy4_A          135 QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL----------------------------------  180 (303)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC----------------------------------------------
T ss_pred             CCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccc----------------------------------
Confidence            6899999999999999999999999999866543221100000000                                  


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDH-EL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~-~~  159 (250)
                                           ...........||+.|+|||++.+. .++.++|||||||++|+|++   ||..... ..
T Consensus       181 ---------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~  236 (303)
T 1zy4_A          181 ---------------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN  236 (303)
T ss_dssp             ----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             ---------------------cccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence                                 0000011124689999999999875 58999999999999999998   5643322 23


Q ss_pred             HHHHHHHhccCCC--CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccc
Q 025601          160 TLANIVARALEFP--KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       160 ~~~~i~~~~~~~p--~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~  219 (250)
                      ....+......++  ....++..+.+||.+||+.||++|||    ++++++||||....+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~  294 (303)
T 1zy4_A          237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG----ARTLLNSGWLPVKHQDE  294 (303)
T ss_dssp             HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC----HHHHHHSSCSCCCCHHH
T ss_pred             HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC----HHHHhCCCCcCCCChHH
Confidence            3333333332322  23456778999999999999999999    99999999999876653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.4e-26  Score=197.04  Aligned_cols=135  Identities=26%  Similarity=0.385  Sum_probs=108.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       170 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------------------  209 (325)
T 3kul_A          170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY----------------------------------------  209 (325)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE----------------------------------------
T ss_pred             CCeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee----------------------------------------
Confidence            6899999999999999999999999999865433211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       210 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  263 (325)
T 3kul_A          210 --------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV  263 (325)
T ss_dssp             --------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH
T ss_pred             --------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence                                      0001246778999999998889999999999999999998 9999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.. ....+.+..++..+.+||.+||+.||++||+    +++++
T Consensus       264 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~eil  305 (325)
T 3kul_A          264 ISSVEE-GYRLPAPMGCPHALHQLMLDCWHKDRAQRPR----FSQIV  305 (325)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHHc-CCCCCCCCCcCHHHHHHHHHHccCChhhCcC----HHHHH
Confidence            766654 4455666789999999999999999999999    55554

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=2.6e-26  Score=199.58  Aligned_cols=135  Identities=21%  Similarity=0.303  Sum_probs=109.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       210 ~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~------------------------------------------  247 (382)
T 3tt0_A          210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY------------------------------------------  247 (382)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT------------------------------------------
T ss_pred             CCEecCCCCcceEEEcCCCcEEEcccCccccccccccc------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       248 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~  302 (382)
T 3tt0_A          248 -------------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  302 (382)
T ss_dssp             -------------------------CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             -------------------------ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     00011246789999999999889999999999999999999 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+. .......+..++.++.+||.+||+.||++||+    ++++++
T Consensus       303 ~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~  345 (382)
T 3tt0_A          303 FKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVE  345 (382)
T ss_dssp             HHHHH-TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            65554 44445556689999999999999999999999    666665

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.93  E-value=2.8e-26  Score=192.45  Aligned_cols=129  Identities=25%  Similarity=0.480  Sum_probs=101.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       130 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  167 (294)
T 4eqm_A          130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT------------------------------------------  167 (294)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------------------------------------------------
T ss_pred             CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc------------------------------------------
Confidence            68999999999999999999999999998654321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.......
T Consensus       168 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~  221 (294)
T 4eqm_A          168 --------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA  221 (294)
T ss_dssp             ---------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH
T ss_pred             --------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                                      011236899999999999988999999999999999999999999998877766


Q ss_pred             HHHHHhccCC---CCCCCCChHHHHHHHHhcccCccccCC
Q 025601          162 ANIVARALEF---PKEPAVPATAKDLISQLLAKDPERRLG  198 (250)
Q Consensus       162 ~~i~~~~~~~---p~~~~~~~~~~~ll~~~L~~dP~~R~t  198 (250)
                      .+.+......   .....++..+.++|.+||+.||++||+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~  261 (294)
T 4eqm_A          222 IKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYK  261 (294)
T ss_dssp             HHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred             HHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence            6555443221   123568999999999999999999996

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=1.2e-26  Score=197.67  Aligned_cols=135  Identities=20%  Similarity=0.302  Sum_probs=104.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       136 ~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~----------------------------------------  175 (327)
T 3lzb_A          136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----------------------------------------  175 (327)
T ss_dssp             TTCCCSCCCGGGEEEEETTEEEECCTTC----------------------------------------------------
T ss_pred             CCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       176 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  228 (327)
T 3lzb_A          176 ---------------------------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             -------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---------------------------ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                       001246788999999999989999999999999999999 9999998876665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ... +......+.+..++.++.+||.+||+.||++||+    +++++.
T Consensus       229 ~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~  271 (327)
T 3lzb_A          229 SSI-LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPK----FRELII  271 (327)
T ss_dssp             HHH-HHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHH-HHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            544 4455556667789999999999999999999999    666554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.7e-27  Score=206.07  Aligned_cols=141  Identities=18%  Similarity=0.288  Sum_probs=112.2

Q ss_pred             ccceeecCCCCcEEeCCCC---CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG---HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.++   .+||+|||+++.......                                        
T Consensus       200 ~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~----------------------------------------  239 (367)
T 3l9p_A          200 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY----------------------------------------  239 (367)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSS----------------------------------------
T ss_pred             CCeeCCCCChhhEEEecCCCCceEEECCCccccccccccc----------------------------------------
Confidence            6899999999999999554   599999998743211000                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDH  157 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~  157 (250)
                                                 ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       240 ---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~  292 (367)
T 3l9p_A          240 ---------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN  292 (367)
T ss_dssp             ---------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ---------------------------cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                                       000112357889999999998889999999999999999998 9999999887


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .+....+... .....+..++..+.+||.+||+.||++||+    +.+++++.++-.
T Consensus       293 ~~~~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~eil~~l~~~~  344 (367)
T 3l9p_A          293 QEVLEFVTSG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYCT  344 (367)
T ss_dssp             HHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHH
T ss_pred             HHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCCHhHCcC----HHHHHHHHHHHh
Confidence            7777666544 344556679999999999999999999999    888888876543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=3.2e-26  Score=191.43  Aligned_cols=136  Identities=24%  Similarity=0.426  Sum_probs=100.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..........                                         
T Consensus       139 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  177 (289)
T 3og7_A          139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH-----------------------------------------  177 (289)
T ss_dssp             TTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------------------
T ss_pred             CCcccccCccceEEECCCCCEEEccceeccccccccccc-----------------------------------------
Confidence            689999999999999999999999999885433211100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS---GEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                ......||+.|+|||++.   +..++.++|||||||++|+|++|..||.+....
T Consensus       178 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  231 (289)
T 3og7_A          178 --------------------------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR  231 (289)
T ss_dssp             --------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH
T ss_pred             --------------------------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH
Confidence                                      001235899999999987   456889999999999999999999999987777


Q ss_pred             HHHHHHHHhccCCCC----CCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          159 LTLANIVARALEFPK----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~----~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ..+..++......+.    ...++..+.+||.+||+.||++||+    ++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~  281 (289)
T 3og7_A          232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPS----FPRILA  281 (289)
T ss_dssp             HHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCC----HHHHHH
Confidence            666666554433222    2368899999999999999999999    666553

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=1e-26  Score=193.61  Aligned_cols=134  Identities=31%  Similarity=0.471  Sum_probs=101.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++.........                                         
T Consensus       135 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  173 (281)
T 1mp8_A          135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-----------------------------------------  173 (281)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECC-------------------------------------------------------
T ss_pred             CCeecccccHHHEEECCCCCEEECccccccccCcccccc-----------------------------------------
Confidence            689999999999999999999999999986543211000                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       174 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~  226 (281)
T 1mp8_A          174 ---------------------------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV  226 (281)
T ss_dssp             --------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---------------------------cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH
Confidence                                       001246778999999998889999999999999999996 9999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... ...+.+..++..+.+||.+||+.||++||+    +.++++
T Consensus       227 ~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~  269 (281)
T 1mp8_A          227 IGRIENG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKA  269 (281)
T ss_dssp             HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            7666544 334556689999999999999999999999    666654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=1.6e-26  Score=191.06  Aligned_cols=135  Identities=21%  Similarity=0.343  Sum_probs=110.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       125 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  162 (269)
T 4hcu_A          125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT------------------------------------------  162 (269)
T ss_dssp             TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH------------------------------------------
T ss_pred             CCeecCCcchheEEEcCCCCEEeccccccccccccccc------------------------------------------
Confidence            68999999999999999999999999988654321110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+......
T Consensus       163 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~  216 (269)
T 4hcu_A          163 --------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV  216 (269)
T ss_dssp             --------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --------------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence                                      0001246788999999998889999999999999999999 9999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+... .....+..++..+.+|+.+||+.||++||+    +++++++
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~  260 (269)
T 4hcu_A          217 VEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ  260 (269)
T ss_dssp             HHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHhcC-ccCCCCCcCCHHHHHHHHHHccCCcccCcC----HHHHHHH
Confidence            7766544 344455678999999999999999999999    7777653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=2.5e-26  Score=204.06  Aligned_cols=131  Identities=21%  Similarity=0.363  Sum_probs=108.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       303 ~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~------------------------------------------  340 (454)
T 1qcf_A          303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT------------------------------------------  340 (454)
T ss_dssp             TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH------------------------------------------
T ss_pred             CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee------------------------------------------
Confidence            68999999999999999999999999998654321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       341 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~  394 (454)
T 1qcf_A          341 --------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV  394 (454)
T ss_dssp             --------------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             --------------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001235778999999998889999999999999999999 9999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+. .....+.+..++.++.+||.+||+.||++|||+.+
T Consensus       395 ~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~  434 (454)
T 1qcf_A          395 IRALE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY  434 (454)
T ss_dssp             HHHHH-HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            76654 44566777789999999999999999999999444

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=1.1e-26  Score=193.84  Aligned_cols=137  Identities=22%  Similarity=0.359  Sum_probs=112.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       140 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  179 (291)
T 1u46_A          140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV----------------------------------------  179 (291)
T ss_dssp             TTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE----------------------------------------
T ss_pred             CCcccCCCchheEEEcCCCCEEEccccccccccccccchh----------------------------------------
Confidence            6899999999999999999999999999855432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       180 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  233 (291)
T 1u46_A          180 --------------------------MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI  233 (291)
T ss_dssp             --------------------------C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --------------------------hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH
Confidence                                      0011246788999999988888999999999999999999 9999999988888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.......+....++..+.++|.+||..||++||+    +.++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~  277 (291)
T 1u46_A          234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALRD  277 (291)
T ss_dssp             HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence            88777766667777789999999999999999999999    777664

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=4.8e-26  Score=190.60  Aligned_cols=137  Identities=20%  Similarity=0.270  Sum_probs=105.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       143 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  182 (298)
T 3pls_A          143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV----------------------------------------  182 (298)
T ss_dssp             TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS----------------------------------------
T ss_pred             CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCC-CCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTP-FRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~p-f~~~~~~~~  160 (250)
                                               .......+|..|+|||++.+..++.++|||||||++|+|++|..| |........
T Consensus       183 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~  237 (298)
T 3pls_A          183 -------------------------QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL  237 (298)
T ss_dssp             -------------------------CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH
T ss_pred             -------------------------ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH
Confidence                                     001123578899999999998899999999999999999995555 555444444


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      . ..+......+.+..++..+.+||.+||+.||++|||    ++++++
T Consensus       238 ~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~  280 (298)
T 3pls_A          238 T-HFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPT----FRVLVG  280 (298)
T ss_dssp             H-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             H-HHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            4 444455556667789999999999999999999999    655543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.93  E-value=9.8e-27  Score=198.10  Aligned_cols=136  Identities=20%  Similarity=0.325  Sum_probs=111.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       183 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  220 (333)
T 2i1m_A          183 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY------------------------------------------  220 (333)
T ss_dssp             TTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTS------------------------------------------
T ss_pred             CCcccCCcccceEEECCCCeEEECccccccccccccce------------------------------------------
Confidence            68999999999999999999999999988543211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       221 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  275 (333)
T 2i1m_A          221 -------------------------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK  275 (333)
T ss_dssp             -------------------------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH
T ss_pred             -------------------------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH
Confidence                                     00012357789999999998889999999999999999998 9999998877777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      +..++......+.+..++..+.+||.+||+.||++||+    +.+++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~  319 (333)
T 2i1m_A          276 FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT----FQQICS  319 (333)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence            77777776666667778999999999999999999999    766654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.2e-25  Score=188.09  Aligned_cols=131  Identities=24%  Similarity=0.435  Sum_probs=99.1

Q ss_pred             ccceeecCCCCcEEeCCCCC-eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGH-IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~-~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      +||+||||||+||+++.++. +||+|||++.......                                           
T Consensus       124 ~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~-------------------------------------------  160 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM-------------------------------------------  160 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTTTEEEECCCCC---------------------------------------------------
T ss_pred             CCeecCCCChhHEEEeCCCCEEEEccccccccccccc-------------------------------------------
Confidence            68999999999999998886 7999999874322110                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-H
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE-L  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~-~  159 (250)
                                                   ....||+.|+|||++.+..++.++|||||||++|+|++|..||...... .
T Consensus       161 -----------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  211 (307)
T 2eva_A          161 -----------------------------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF  211 (307)
T ss_dssp             ---------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH
T ss_pred             -----------------------------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH
Confidence                                         0125889999999999988999999999999999999999999865422 2


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ............+....++..+.+||.+||+.||++||+    ++++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~  256 (307)
T 2eva_A          212 RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPS----MEEIVK  256 (307)
T ss_dssp             HHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence            222222333344455678999999999999999999999    666554

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=3.4e-26  Score=190.36  Aligned_cols=135  Identities=19%  Similarity=0.318  Sum_probs=110.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  176 (283)
T 3gen_A          139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT------------------------------------------  176 (283)
T ss_dssp             TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH------------------------------------------
T ss_pred             CCccCCCCccceEEEcCCCCEEEccccccccccccccc------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       177 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~  230 (283)
T 3gen_A          177 --------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET  230 (283)
T ss_dssp             --------------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             --------------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH
Confidence                                      0001246788999999998889999999999999999998 9999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+... .....+..++..+.+||.+||+.||++||+    +++++.|
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~  274 (283)
T 3gen_A          231 AEHIAQG-LRLYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN  274 (283)
T ss_dssp             HHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHhcc-cCCCCCCcCCHHHHHHHHHHccCChhHCcC----HHHHHHH
Confidence            7766554 344455678999999999999999999999    7777653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=2.9e-26  Score=191.71  Aligned_cols=138  Identities=19%  Similarity=0.289  Sum_probs=102.4

Q ss_pred             ccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++   .++.+||+|||++............                                    
T Consensus       124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~------------------------------------  167 (296)
T 3uzp_A          124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI------------------------------------  167 (296)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC------------------------------------
T ss_pred             CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccc------------------------------------
Confidence            6899999999999994   7889999999998654332110000                                    


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD--  156 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~--  156 (250)
                                                .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+..  
T Consensus       168 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  221 (296)
T 3uzp_A          168 --------------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA  221 (296)
T ss_dssp             --------------------------CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred             --------------------------ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch
Confidence                                      0001113468999999999999889999999999999999999999998743  


Q ss_pred             -hHHHHHHHHHhccCCC---CCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          157 -HELTLANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       157 -~~~~~~~i~~~~~~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                       ....+..+.......+   ....++.++.+||.+||+.||++||++.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  270 (296)
T 3uzp_A          222 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY  270 (296)
T ss_dssp             SSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHH
T ss_pred             hhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHH
Confidence             2233333433333322   12468999999999999999999999444

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=5.7e-26  Score=201.56  Aligned_cols=127  Identities=21%  Similarity=0.377  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.......                                           
T Consensus       308 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------------------------------------  344 (450)
T 1k9a_A          308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-------------------------------------------  344 (450)
T ss_dssp             TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCeeCCCCCHhhEEECCCCCEEEeeCCCccccccccc-------------------------------------------
Confidence            6899999999999999999999999999853221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                   ...++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       345 -----------------------------~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~  395 (450)
T 1k9a_A          345 -----------------------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  395 (450)
T ss_dssp             -------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH
T ss_pred             -----------------------------CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                         1135788999999999999999999999999999998 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+. ....++.+..++..+.+||.+||+.||++|||+.+
T Consensus       396 ~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~  435 (450)
T 1k9a_A          396 VPRVE-KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQ  435 (450)
T ss_dssp             HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            66554 44556667789999999999999999999999444

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=3.2e-26  Score=189.11  Aligned_cols=135  Identities=20%  Similarity=0.271  Sum_probs=109.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------------  160 (268)
T 3sxs_A          123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV------------------------------------------  160 (268)
T ss_dssp             TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE------------------------------------------
T ss_pred             CCeecCCcCcceEEECCCCCEEEccCccceecchhhhh------------------------------------------
Confidence            68999999999999999999999999988554322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       161 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  214 (268)
T 3sxs_A          161 --------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV  214 (268)
T ss_dssp             --------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             --------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH
Confidence                                      0011246778999999998889999999999999999998 9999998888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+.... ....+..++..+.+||.+||+.||++|||    +.+++++
T Consensus       215 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~  258 (268)
T 3sxs_A          215 VLKVSQGH-RLYRPHLASDTIYQIMYSCWHELPEKRPT----FQQLLSS  258 (268)
T ss_dssp             HHHHHTTC-CCCCCTTSCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcCC-CCCCCCcChHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence            76665443 34445568999999999999999999999    7777654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=2.6e-26  Score=199.24  Aligned_cols=134  Identities=25%  Similarity=0.354  Sum_probs=107.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~------------------------------------------  269 (377)
T 3cbl_A          232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA------------------------------------------  269 (377)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE------------------------------------------
T ss_pred             CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee------------------------------------------
Confidence            68999999999999999999999999998543221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       270 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~  324 (377)
T 3cbl_A          270 -------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT  324 (377)
T ss_dssp             -------------------------CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH
T ss_pred             -------------------------ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     00001135678999999998889999999999999999998 9999998887666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+ ......+.+..++..+.+||.+||+.||++|||    +++++
T Consensus       325 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~  366 (377)
T 3cbl_A          325 REFV-EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPS----FSTIY  366 (377)
T ss_dssp             HHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHH
Confidence            5444 455566677789999999999999999999999    55554

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.93  E-value=3.8e-26  Score=189.99  Aligned_cols=134  Identities=21%  Similarity=0.333  Sum_probs=107.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       132 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  169 (281)
T 3cc6_A          132 INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY------------------------------------------  169 (281)
T ss_dssp             TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------------------------------------------------
T ss_pred             CCcccCCCccceEEECCCCcEEeCccCCCccccccccc------------------------------------------
Confidence            68999999999999999999999999988554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       170 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~  223 (281)
T 3cc6_A          170 --------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV  223 (281)
T ss_dssp             -----------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH
T ss_pred             --------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH
Confidence                                      0001246788999999988889999999999999999998 9999988777666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... ...+.+..++..+.+||.+||..||++||+    +.+++.
T Consensus       224 ~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~  266 (281)
T 3cc6_A          224 IGVLEKG-DRLPKPDLCPPVLYTLMTRCWDYDPSDRPR----FTELVC  266 (281)
T ss_dssp             HHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhcC-CCCCCCCCCCHHHHHHHHHHccCCchhCcC----HHHHHH
Confidence            6555443 345556678999999999999999999999    777664

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.93  E-value=2.8e-26  Score=193.38  Aligned_cols=135  Identities=21%  Similarity=0.333  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..........                                         
T Consensus       169 ~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  207 (314)
T 2ivs_A          169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV-----------------------------------------  207 (314)
T ss_dssp             TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE-----------------------------------------
T ss_pred             CCCcccccchheEEEcCCCCEEEccccccccccccccce-----------------------------------------
Confidence            689999999999999999999999999885543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       208 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          208 --------------------------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             --------------------------CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             --------------------------eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0011246788999999998889999999999999999999 9999998877666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+. .......+..++..+.+||.+||+.||++||+    +.+++.
T Consensus       262 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~l~~  304 (314)
T 2ivs_A          262 FNLLK-TGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV----FADISK  304 (314)
T ss_dssp             HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHhh-cCCcCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            55443 34444556689999999999999999999999    766654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=2.8e-26  Score=196.59  Aligned_cols=138  Identities=15%  Similarity=0.183  Sum_probs=99.5

Q ss_pred             ccceeecCCCCcEEeCCCC--CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSDG--HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~--~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+|||++.++  .+||+|||+++..........                                      
T Consensus       170 ~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~--------------------------------------  211 (345)
T 2v62_A          170 NEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQ--------------------------------------  211 (345)
T ss_dssp             TTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCC--------------------------------------
T ss_pred             CCeeCCCcCHHHEEEccCCCCcEEEEeCCCceeccccccccc--------------------------------------
Confidence            6899999999999999877  999999999866432211000                                      


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-HE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-~~  158 (250)
                                              ..........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. ..
T Consensus       212 ------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~  267 (345)
T 2v62_A          212 ------------------------YQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP  267 (345)
T ss_dssp             ------------------------CCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred             ------------------------chhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence                                    00001113468999999999999889999999999999999999999996532 22


Q ss_pred             HHHHHHHHh-ccCCCC-------CCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          159 LTLANIVAR-ALEFPK-------EPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       159 ~~~~~i~~~-~~~~p~-------~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ......... ....+.       ...++.++.+||.+||..||++||++.+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  318 (345)
T 2v62_A          268 VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQA  318 (345)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence            222221111 111111       1268999999999999999999999433

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=2.7e-26  Score=195.94  Aligned_cols=135  Identities=22%  Similarity=0.326  Sum_probs=108.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       193 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  230 (343)
T 1luf_A          193 RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY------------------------------------------  230 (343)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB------------------------------------------
T ss_pred             CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc------------------------------------------
Confidence            68999999999999999999999999987443211000                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       231 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  285 (343)
T 1luf_A          231 -------------------------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV  285 (343)
T ss_dssp             -------------------------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred             -------------------------cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH
Confidence                                     00011257889999999998889999999999999999999 9999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+..... ...+..++..+.+||.+||+.||++||+    +.+++.
T Consensus       286 ~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~~~~  328 (343)
T 1luf_A          286 IYYVRDGNI-LACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR  328 (343)
T ss_dssp             HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhCCCc-CCCCCCCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence            776655443 3445678999999999999999999999    655543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.92  E-value=8.8e-26  Score=190.61  Aligned_cols=136  Identities=20%  Similarity=0.291  Sum_probs=105.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||++..........                                        
T Consensus       165 ~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------------  204 (313)
T 3brb_A          165 NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR----------------------------------------  204 (313)
T ss_dssp             TTTCCCCCCSGGGEEECTTSCEEECSCSCC--------------------------------------------------
T ss_pred             hCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccC----------------------------------------
Confidence            4699999999999999999999999999985543211000                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.....
T Consensus       205 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  257 (313)
T 3brb_A          205 ---------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE  257 (313)
T ss_dssp             ---------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             ---------------------------cccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH
Confidence                                       0001246788999999999889999999999999999999 999999888777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+.... ....+..++..+.+||.+||..||++||+    +++++.
T Consensus       258 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~  301 (313)
T 3brb_A          258 MYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPT----FSVLRL  301 (313)
T ss_dssp             HHHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            666665443 34455678999999999999999999999    776664

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=2.9e-26  Score=192.19  Aligned_cols=138  Identities=28%  Similarity=0.452  Sum_probs=98.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.........                                         
T Consensus       132 ~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-----------------------------------------  170 (301)
T 3q4u_A          132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQL-----------------------------------------  170 (301)
T ss_dssp             CEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE-----------------------------------------
T ss_pred             CCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccc-----------------------------------------
Confidence            589999999999999999999999999985433211100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC------CCCchhHHHHHHHHHHHHHhC-------
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYG-------  148 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~vl~elltg-------  148 (250)
                                              ........||+.|+|||++.+.      .++.++|||||||++|+|++|       
T Consensus       171 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~  226 (301)
T 3q4u_A          171 ------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV  226 (301)
T ss_dssp             ------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             ------------------------cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence                                    0011123689999999999876      345799999999999999999       


Q ss_pred             ---CCCCCCCC----hHHHHHHHHHhccCCCCC------CCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          149 ---VTPFRGVD----HELTLANIVARALEFPKE------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       149 ---~~pf~~~~----~~~~~~~i~~~~~~~p~~------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                         ..||....    .......+.......+..      ..++..+.+||.+||+.||++|||    ++++++
T Consensus       227 ~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~~  295 (301)
T 3q4u_A          227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT----ALRIKK  295 (301)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC----HHHHHH
T ss_pred             ccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC----HHHHHH
Confidence               88886532    223333333222222211      124467999999999999999999    666653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4e-26  Score=197.93  Aligned_cols=137  Identities=18%  Similarity=0.259  Sum_probs=99.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       211 ~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------------------  250 (373)
T 3c1x_A          211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------------------------------------  250 (373)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECCC------------------------------------------------------
T ss_pred             CCEecCccchheEEECCCCCEEEeeccccccccccccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       251 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~  305 (373)
T 3c1x_A          251 -------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  305 (373)
T ss_dssp             --------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH
T ss_pred             -------------------------cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH
Confidence                                     00011246789999999999889999999999999999999 7888887766555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... .....+..++..+.+||.+||+.||++||+    ++++++
T Consensus       306 ~~~~~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~RPs----~~ell~  348 (373)
T 3c1x_A          306 TVYLLQG-RRLLQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVS  348 (373)
T ss_dssp             HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            5555443 344455678999999999999999999999    555543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.92  E-value=7.8e-26  Score=200.79  Aligned_cols=133  Identities=27%  Similarity=0.404  Sum_probs=106.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       299 ~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------  336 (452)
T 1fmk_A          299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT------------------------------------------  336 (452)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------------------------------------------
T ss_pred             CCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee------------------------------------------
Confidence            68999999999999999999999999998654321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       337 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~  390 (452)
T 1fmk_A          337 --------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV  390 (452)
T ss_dssp             --------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001246788999999998889999999999999999999 9999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+. .....+.+..++..+.+||.+||+.||++|||    +++++
T Consensus       391 ~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~~l~  432 (452)
T 1fmk_A          391 LDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQ  432 (452)
T ss_dssp             HHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHH
Confidence            76654 44556667789999999999999999999999    55554

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.92  E-value=2.1e-25  Score=183.94  Aligned_cols=129  Identities=18%  Similarity=0.308  Sum_probs=108.2

Q ss_pred             cc--ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LG--IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~g--iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|  |+||||||+||+++.++.++|+|||+......                                            
T Consensus       130 ~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~--------------------------------------------  165 (271)
T 3kmu_A          130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS--------------------------------------------  165 (271)
T ss_dssp             SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC--------------------------------------------
T ss_pred             CCCceecCCCccceEEEcCCcceeEEeccceeeecc--------------------------------------------
Confidence            46  99999999999999999999998887532111                                            


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCC---chhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHG---SPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                                    ....+|+.|+|||++.+..++   .++|||||||++|+|++|..||.+..
T Consensus       166 ------------------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  215 (271)
T 3kmu_A          166 ------------------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS  215 (271)
T ss_dssp             ------------------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred             ------------------------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence                                          012578999999999876543   38999999999999999999999998


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .......+.........+..++..+.+||.+||+.||++|||    ++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~  263 (271)
T 3kmu_A          216 NMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK----FDMIVP  263 (271)
T ss_dssp             HHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            888878877776666667789999999999999999999999    666653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.92  E-value=3.6e-26  Score=193.69  Aligned_cols=136  Identities=25%  Similarity=0.476  Sum_probs=103.5

Q ss_pred             ccceeecCCCCcEEe----CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLV----RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||++    +.++.+||+|||+++.......                                       
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~---------------------------------------  171 (319)
T 4euu_A          131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------------------------------------  171 (319)
T ss_dssp             TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC---------------------------------------
T ss_pred             CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc---------------------------------------
Confidence            689999999999999    6778899999999855432110                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec--------CCCCCchhHHHHHHHHHHHHHhCC
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS--------GEGHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                     .....||+.|+|||++.        +..++.++|||||||++|+|++|.
T Consensus       172 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~  220 (319)
T 4euu_A          172 -------------------------------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS  220 (319)
T ss_dssp             -------------------------------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred             -------------------------------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                           01236899999999986        466899999999999999999999


Q ss_pred             CCCCCCC----hHHHHHHHHHhcc-------------------CCCCC----CCCChHHHHHHHHhcccCccccCCCccC
Q 025601          150 TPFRGVD----HELTLANIVARAL-------------------EFPKE----PAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       150 ~pf~~~~----~~~~~~~i~~~~~-------------------~~p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      .||.+..    ..+.+.+++....                   .++..    ..++..+.+||.+||+.||++|||    
T Consensus       221 ~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s----  296 (319)
T 4euu_A          221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG----  296 (319)
T ss_dssp             CSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC----
T ss_pred             CCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhcc----
Confidence            9997543    3445555554432                   11111    123456889999999999999999    


Q ss_pred             hHHHhcCCC
Q 025601          203 ASAIKHHPF  211 (250)
Q Consensus       203 a~~ll~hp~  211 (250)
                      ++++|+||-
T Consensus       297 ~~ell~h~~  305 (319)
T 4euu_A          297 FDQFFAETS  305 (319)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHhhhccH
Confidence            999998863

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=4.8e-26  Score=190.02  Aligned_cols=137  Identities=22%  Similarity=0.269  Sum_probs=110.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..........                                         
T Consensus       129 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  167 (287)
T 1u59_A          129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY-----------------------------------------  167 (287)
T ss_dssp             TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE-----------------------------------------
T ss_pred             CCEeeCCCchheEEEcCCCCEEECcccceeeeccCccee-----------------------------------------
Confidence            689999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       168 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  222 (287)
T 1u59_A          168 -------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV  222 (287)
T ss_dssp             -------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH
T ss_pred             -------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence                                     00011246789999999988889999999999999999998 9999998887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+... .....+..++..+.+||.+||+.||++||+    +.+++++
T Consensus       223 ~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~~  266 (287)
T 1u59_A          223 MAFIEQG-KRMECPPECPPELYALMSDCWIYKWEDRPD----FLTVEQR  266 (287)
T ss_dssp             HHHHHTT-CCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHhcC-CcCCCCCCcCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence            6655443 334455689999999999999999999999    7777764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.92  E-value=7.3e-26  Score=189.55  Aligned_cols=136  Identities=18%  Similarity=0.303  Sum_probs=102.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       133 ~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  172 (295)
T 3ugc_A          133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK----------------------------------------  172 (295)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCCCSCC--------------------------------------------------
T ss_pred             CCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceee----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE---  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~---  158 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++|..||......   
T Consensus       173 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~  226 (295)
T 3ugc_A          173 --------------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR  226 (295)
T ss_dssp             -----------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHH
T ss_pred             --------------------------eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHh
Confidence                                      000124677899999999988999999999999999999999988643211   


Q ss_pred             ------------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 ------------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 ------------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                                  ......+......+.+..++.++.+||.+||+.||++|||    +++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~el~  283 (295)
T 3ugc_A          227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS----FRDLA  283 (295)
T ss_dssp             HHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred             hhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCC----HHHHH
Confidence                        1223334445566667789999999999999999999999    66654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.4e-25  Score=191.46  Aligned_cols=133  Identities=24%  Similarity=0.365  Sum_probs=102.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       166 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  205 (333)
T 1mqb_A          166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY----------------------------------------  205 (333)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECCCCC----------------------------------------------------
T ss_pred             CCeeCCCCChheEEECCCCcEEECCCCcchhhcccccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       206 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~  259 (333)
T 1mqb_A          206 --------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV  259 (333)
T ss_dssp             -------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence                                      0001235788999999998889999999999999999998 9999998887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+.. ....+.+..++..+.+||.+||+.||++||++.+
T Consensus       260 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  299 (333)
T 1mqb_A          260 MKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD  299 (333)
T ss_dssp             HHHHHT-TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHC-CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence            665544 3455566789999999999999999999999433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=1.2e-25  Score=195.00  Aligned_cols=134  Identities=23%  Similarity=0.346  Sum_probs=98.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       166 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------------------  205 (373)
T 2qol_A          166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY----------------------------------------  205 (373)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECCC------------------------------------------------------
T ss_pred             CCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccce----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|||++ |..||.+......
T Consensus       206 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~  259 (373)
T 2qol_A          206 --------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV  259 (373)
T ss_dssp             ----------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH
T ss_pred             --------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001135778999999998889999999999999999997 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                      ...+. .....+.+..++..+.+||.+||+.||++||++.+.
T Consensus       260 ~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i  300 (373)
T 2qol_A          260 IKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI  300 (373)
T ss_dssp             HHHHH-TTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHHH-cCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHH
Confidence            65554 444555666899999999999999999999995443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.92  E-value=1.2e-25  Score=188.47  Aligned_cols=137  Identities=18%  Similarity=0.256  Sum_probs=106.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++..........                                        
T Consensus       147 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------------------  186 (298)
T 3f66_A          147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------------------------------------  186 (298)
T ss_dssp             TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC----------------------------------------
T ss_pred             CCccCCCCchheEEECCCCCEEECcccccccccccchhcc----------------------------------------
Confidence            6899999999999999999999999999865433211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       187 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~  241 (298)
T 3f66_A          187 -------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  241 (298)
T ss_dssp             ------------------------------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH
T ss_pred             -------------------------ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH
Confidence                                     00112357889999999998889999999999999999999 6677777766666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.... ....+..++..+.+|+.+||+.||++||+    ++++++
T Consensus       242 ~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~  284 (298)
T 3f66_A          242 TVYLLQGR-RLLQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVS  284 (298)
T ss_dssp             HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence            65555443 33445678999999999999999999999    666553

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=4.8e-26  Score=193.55  Aligned_cols=133  Identities=21%  Similarity=0.259  Sum_probs=106.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++......                                            
T Consensus       161 ~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------  196 (327)
T 1fvr_A          161 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------------------------------------------  196 (327)
T ss_dssp             TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC--------------------------------------------
T ss_pred             CCccCCCCccceEEEcCCCeEEEcccCcCccccccc--------------------------------------------
Confidence            689999999999999999999999999874321100                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       197 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~  250 (327)
T 1fvr_A          197 --------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL  250 (327)
T ss_dssp             --------------------------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --------------------------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH
Confidence                                      0001246789999999988888999999999999999998 9999999887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+.. ......+..++..+.+||.+||..||++||+    +++++.+
T Consensus       251 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~  294 (327)
T 1fvr_A          251 YEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS  294 (327)
T ss_dssp             HHHGGG-TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHhhc-CCCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            665543 3344555678999999999999999999999    7666653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=1.2e-25  Score=191.73  Aligned_cols=135  Identities=19%  Similarity=0.301  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       176 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------------------------------------------  213 (334)
T 2pvf_A          176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY------------------------------------------  213 (334)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSE------------------------------------------
T ss_pred             CCeeCCCCccceEEEcCCCCEEEccccccccccccccc------------------------------------------
Confidence            68999999999999999999999999998543321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       214 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  268 (334)
T 2pvf_A          214 -------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  268 (334)
T ss_dssp             -------------------------ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             -------------------------cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence                                     00011246788999999988889999999999999999999 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... .....+..++..+.+||.+||+.||++||+    ++++++
T Consensus       269 ~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~  311 (334)
T 2pvf_A          269 FKLLKEG-HRMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVE  311 (334)
T ss_dssp             HHHHHHT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhcC-CCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            6655443 344555678999999999999999999999    666554

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.92  E-value=2.4e-25  Score=188.20  Aligned_cols=138  Identities=22%  Similarity=0.239  Sum_probs=104.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++ ++.+||+|||++...........                                        
T Consensus       149 ~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~----------------------------------------  187 (319)
T 2y4i_B          149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR----------------------------------------  187 (319)
T ss_dssp             TTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------------------------------------
T ss_pred             CCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc----------------------------------------
Confidence            6899999999999998 78999999998754322111000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---------CCCCchhHHHHHHHHHHHHHhCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---------EGHGSPVDWWTLGIFLFELFYGVTPF  152 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlG~vl~elltg~~pf  152 (250)
                                              ........||+.|+|||++.+         ..++.++|||||||++|+|++|..||
T Consensus       188 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~  243 (319)
T 2y4i_B          188 ------------------------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF  243 (319)
T ss_dssp             ------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------------------------ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                                    000112358899999999875         34789999999999999999999999


Q ss_pred             CCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          153 RGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       153 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+.........+............++.++.+||.+||..||++||+    ++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~l~~  295 (319)
T 2y4i_B          244 KTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPT----FTKLMD  295 (319)
T ss_dssp             SSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCC----HHHHHH
T ss_pred             CCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence            9988887777776655544444568999999999999999999999    666654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=1.9e-25  Score=185.41  Aligned_cols=133  Identities=21%  Similarity=0.332  Sum_probs=107.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       128 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  165 (279)
T 1qpc_A          128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------------------------------------------  165 (279)
T ss_dssp             TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE------------------------------------------
T ss_pred             CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc------------------------------------------
Confidence            68999999999999999999999999988554322100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus       166 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  219 (279)
T 1qpc_A          166 --------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV  219 (279)
T ss_dssp             --------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH
Confidence                                      0001246788999999988888999999999999999999 9999999887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.. ......+..++.++.+|+.+||..||++||+    +++++
T Consensus       220 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~  261 (279)
T 1qpc_A          220 IQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPT----FDYLR  261 (279)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHhc-ccCCCCcccccHHHHHHHHHHhccChhhCCC----HHHHH
Confidence            666544 3444556688999999999999999999999    65554

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.2e-25  Score=185.37  Aligned_cols=134  Identities=21%  Similarity=0.342  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       123 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------  160 (267)
T 3t9t_A          123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT------------------------------------------  160 (267)
T ss_dssp             TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH------------------------------------------
T ss_pred             CCcccCCCchheEEECCCCCEEEccccccccccccccc------------------------------------------
Confidence            68999999999999999999999999988554321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       161 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  214 (267)
T 3t9t_A          161 --------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV  214 (267)
T ss_dssp             --------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --------------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH
Confidence                                      0001246788999999998889999999999999999999 8999998887777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+... .....+..++..+.+|+.+||+.||++||+    ++++++
T Consensus       215 ~~~i~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~  257 (267)
T 3t9t_A          215 VEDISTG-FRLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLR  257 (267)
T ss_dssp             HHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhcC-CcCCCCccCcHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence            7666544 334445578999999999999999999999    777664

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=2e-25  Score=185.38  Aligned_cols=129  Identities=20%  Similarity=0.367  Sum_probs=102.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       136 ~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-------------------------------------------  172 (278)
T 1byg_A          136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-------------------------------------------  172 (278)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred             CCccccCCCcceEEEeCCCcEEEeecccccccccccc-------------------------------------------
Confidence            6899999999999999999999999998743221100                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                   ...+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       173 -----------------------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  223 (278)
T 1byg_A          173 -----------------------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  223 (278)
T ss_dssp             --------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH
T ss_pred             -----------------------------CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                         1146788999999998889999999999999999998 9999998876666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.. ......+..++..+.++|.+||+.||++||+    +.+++
T Consensus       224 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~  265 (278)
T 1byg_A          224 VPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS----FLQLR  265 (278)
T ss_dssp             HHHHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHhc-CCCCCCcccCCHHHHHHHHHHhcCChhhCCC----HHHHH
Confidence            655543 3344556678999999999999999999999    66554

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=1.6e-25  Score=205.73  Aligned_cols=133  Identities=22%  Similarity=0.258  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++..........                                        
T Consensus       455 ~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~----------------------------------------  494 (613)
T 2ozo_A          455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT----------------------------------------  494 (613)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------------------------------------------
T ss_pred             CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       495 --------------------------~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~  548 (613)
T 2ozo_A          495 --------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV  548 (613)
T ss_dssp             ---------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH
T ss_pred             --------------------------eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                      0001135688999999998889999999999999999998 9999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+.. ....+.+..++.++.+||.+||+.||++||++.+
T Consensus       549 ~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~  588 (613)
T 2ozo_A          549 MAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDRPDFLT  588 (613)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHH
T ss_pred             HHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHH
Confidence            766544 4455666789999999999999999999999554

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=2.2e-25  Score=189.46  Aligned_cols=143  Identities=27%  Similarity=0.402  Sum_probs=88.2

Q ss_pred             cc--ceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LG--IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~g--iiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +|  |+||||||+|||++.++.+||+|||+++...............                                 
T Consensus       155 ~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~---------------------------------  201 (337)
T 3ll6_A          155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRR---------------------------------  201 (337)
T ss_dssp             SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------------------------------------------
T ss_pred             CCCCEEEccCCcccEEECCCCCEEEecCccceeccccCccccccccc---------------------------------
Confidence            46  9999999999999999999999999986654332111000000                                 


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCcee---cCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIV---SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD  156 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~  156 (250)
                                              ..........+|+.|+|||++   .+..++.++|||||||++|+|++|..||.+..
T Consensus       202 ------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  257 (337)
T 3ll6_A          202 ------------------------ALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA  257 (337)
T ss_dssp             ----------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             ------------------------ccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence                                    000001123689999999998   45568999999999999999999999997654


Q ss_pred             hHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       157 ~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ..    .++......+....++..+.+||.+||+.||++||+    +++++++
T Consensus       258 ~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~  302 (337)
T 3ll6_A          258 KL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS----IAEVVHQ  302 (337)
T ss_dssp             ------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred             HH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence            33    233444555666678899999999999999999999    7777765

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=9.6e-26  Score=207.88  Aligned_cols=133  Identities=24%  Similarity=0.339  Sum_probs=105.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++..........                                        
T Consensus       488 ~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~----------------------------------------  527 (635)
T 4fl3_A          488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----------------------------------------  527 (635)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------------------------------------------
T ss_pred             CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       528 --------------------------~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~  581 (635)
T 4fl3_A          528 --------------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV  581 (635)
T ss_dssp             ---------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001246788999999999889999999999999999998 9999999887776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ...+. .....+.+..++.++.+||.+||+.||++||++.+
T Consensus       582 ~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~  621 (635)
T 4fl3_A          582 TAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAA  621 (635)
T ss_dssp             HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHH
Confidence            66554 44455666789999999999999999999999443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.4e-25  Score=192.75  Aligned_cols=138  Identities=15%  Similarity=0.247  Sum_probs=101.2

Q ss_pred             ccceeecCCCCcEEeCCCC--CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            2 LGIVYRDLKPENVLVRSDG--HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~--~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      +||+||||||+||+++.++  .+||+|||+++...........                                     
T Consensus       178 ~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-------------------------------------  220 (352)
T 2jii_A          178 NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY-------------------------------------  220 (352)
T ss_dssp             TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC-------------------------------------
T ss_pred             CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc-------------------------------------
Confidence            6999999999999999988  8999999998665432110000                                     


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD-HE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~-~~  158 (250)
                                               .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. ..
T Consensus       221 -------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  275 (352)
T 2jii_A          221 -------------------------VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT  275 (352)
T ss_dssp             -------------------------CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             -------------------------cccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence                                     0001112468999999999999889999999999999999999999998764 33


Q ss_pred             HHHHHHHHh----ccCCCC----CCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          159 LTLANIVAR----ALEFPK----EPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       159 ~~~~~i~~~----~~~~p~----~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ..+......    ...+..    ...++.++.+||.+||..||++||++.+
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  326 (352)
T 2jii_A          276 EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAM  326 (352)
T ss_dssp             HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred             HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHH
Confidence            333332221    111111    1246899999999999999999999443

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=1.2e-25  Score=187.47  Aligned_cols=128  Identities=16%  Similarity=0.242  Sum_probs=98.9

Q ss_pred             ccceeecCCCCcEEeCCCCC--------eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH--------IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPN   73 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~--------~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (250)
                      +||+||||||+||+++.++.        +||+|||++.......                                    
T Consensus       132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------  175 (289)
T 4fvq_A          132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------------------------------------  175 (289)
T ss_dssp             TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH------------------------------------
T ss_pred             CCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCcc------------------------------------
Confidence            68999999999999998876        9999999874432211                                    


Q ss_pred             CCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCC
Q 025601           74 CIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPF  152 (250)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf  152 (250)
                                                           ...+|+.|+|||++.+ ..++.++|||||||++|+|++|..|+
T Consensus       176 -------------------------------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (289)
T 4fvq_A          176 -------------------------------------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP  218 (289)
T ss_dssp             -------------------------------------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             -------------------------------------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                                                 1247888999999988 56899999999999999999965544


Q ss_pred             CCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          153 RGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       153 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...........+.......  +..++.++.+||.+||+.||++||+    ++++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~  268 (289)
T 4fvq_A          219 LSALDSQRKLQFYEDRHQL--PAPKAAELANLINNCMDYEPDHRPS----FRAIIR  268 (289)
T ss_dssp             TTTSCHHHHHHHHHTTCCC--CCCSSCTTHHHHHHHSCSSGGGSCC----HHHHHH
T ss_pred             ccccchHHHHHHhhccCCC--CCCCCHHHHHHHHHHcCCChhHCcC----HHHHHH
Confidence            4443344444444444333  3457899999999999999999999    777765

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.92  E-value=1.1e-25  Score=201.93  Aligned_cols=131  Identities=19%  Similarity=0.343  Sum_probs=106.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       337 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------------------------------------------  374 (495)
T 1opk_A          337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------  374 (495)
T ss_dssp             TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE------------------------------------------
T ss_pred             CCcccCCCChhhEEECCCCcEEEeecccceeccCCcee------------------------------------------
Confidence            68999999999999999999999999998654321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|||++ |..||.+......
T Consensus       375 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~  428 (495)
T 1opk_A          375 --------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  428 (495)
T ss_dssp             --------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             --------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001245778999999998889999999999999999998 9999998887665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ... +.....++.+..++..+.+||.+||+.||++||++.+
T Consensus       429 ~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  468 (495)
T 1opk_A          429 YEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE  468 (495)
T ss_dssp             HHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHH-HHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHH
Confidence            544 4555566667789999999999999999999999444

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.92  E-value=1.3e-25  Score=187.87  Aligned_cols=135  Identities=24%  Similarity=0.346  Sum_probs=106.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       136 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  175 (291)
T 1xbb_A          136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----------------------------------------  175 (291)
T ss_dssp             TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE----------------------------------------
T ss_pred             CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc----------------------------------------
Confidence            6899999999999999999999999999855432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       176 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~  229 (291)
T 1xbb_A          176 --------------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV  229 (291)
T ss_dssp             --------------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence                                      0001136788999999988888999999999999999999 9999998887766


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.. ......+..++..+.+||.+||+.||++||+    +.+++
T Consensus       230 ~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~  271 (291)
T 1xbb_A          230 TAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPG----FAAVE  271 (291)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCC----HHHHH
T ss_pred             HHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence            655544 3344555678999999999999999999999    55554

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.92  E-value=6.1e-26  Score=192.73  Aligned_cols=135  Identities=28%  Similarity=0.392  Sum_probs=96.2

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+||+++.++.+||+|||+++........                                           
T Consensus       151 ~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~-------------------------------------------  187 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA-------------------------------------------  187 (322)
T ss_dssp             EEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC-------------------------------------------
T ss_pred             CEEeCCCChHhEEECCCCeEEEccCCcccccccccCc-------------------------------------------
Confidence            9999999999999999999999999998554321110                                           


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-----GHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                              .......||+.|+|||++.+.     .++.++|||||||++|+|++|..||.+...
T Consensus       188 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          188 ------------------------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             ------------------------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             ------------------------cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence                                    001123689999999999873     356788999999999999999999976421


Q ss_pred             ---------------HHHHHHHHHhccCCCCCC------CCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          158 ---------------ELTLANIVARALEFPKEP------AVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       158 ---------------~~~~~~i~~~~~~~p~~~------~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                                     ...+...+......+...      ..+..+.+||.+||+.||++|||    ++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~  311 (322)
T 3soc_A          244 EYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS----AGCVGE  311 (322)
T ss_dssp             CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             hhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence                           122222222222212111      12345999999999999999999    666553

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=2e-25  Score=202.17  Aligned_cols=133  Identities=27%  Similarity=0.404  Sum_probs=109.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       382 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~------------------------------------------  419 (535)
T 2h8h_A          382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT------------------------------------------  419 (535)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH------------------------------------------
T ss_pred             CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee------------------------------------------
Confidence            68999999999999999999999999998654321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       420 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~  473 (535)
T 2h8h_A          420 --------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV  473 (535)
T ss_dssp             --------------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH
T ss_pred             --------------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0001246778999999998889999999999999999999 9999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +..+. ....++.+..++..+.+||.+||+.||++||+    +++|+
T Consensus       474 ~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~~l~  515 (535)
T 2h8h_A          474 LDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQ  515 (535)
T ss_dssp             HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence            76654 44556667789999999999999999999999    55544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.92  E-value=1.9e-25  Score=186.23  Aligned_cols=134  Identities=20%  Similarity=0.358  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       130 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~------------------------------------------  167 (288)
T 3kfa_A          130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------  167 (288)
T ss_dssp             HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE------------------------------------------
T ss_pred             CCccCCCCCcceEEEcCCCCEEEccCccceeccCCccc------------------------------------------
Confidence            58999999999999999999999999988554322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+......
T Consensus       168 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~  221 (288)
T 3kfa_A          168 --------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  221 (288)
T ss_dssp             --------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             --------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0011246788999999998889999999999999999999 9999998776665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+ ........+..++..+.+||.+||..||++||+    ++++++
T Consensus       222 ~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~~~~  264 (288)
T 3kfa_A          222 YELL-EKDYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ  264 (288)
T ss_dssp             HHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHH-hccCCCCCCCCCCHHHHHHHHHHhCCChhhCcC----HHHHHH
Confidence            5544 444455666789999999999999999999999    666543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.92  E-value=5.7e-26  Score=193.10  Aligned_cols=146  Identities=25%  Similarity=0.318  Sum_probs=107.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       146 ~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~----------------------------------------  185 (327)
T 3lxl_A          146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV----------------------------------------  185 (327)
T ss_dssp             TTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEE----------------------------------------
T ss_pred             CCccCCCCChhhEEECCCCCEEEcccccceecccCCccce----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE---  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~---  158 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++|..||......   
T Consensus       186 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~  239 (327)
T 3lxl_A          186 --------------------------VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR  239 (327)
T ss_dssp             --------------------------CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             --------------------------eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh
Confidence                                      011125788899999999888899999999999999999999998654321   


Q ss_pred             -----------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHH---hcCCCCCCCCc
Q 025601          159 -----------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAI---KHHPFFQGVNW  217 (250)
Q Consensus       159 -----------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l---l~hp~~~~~~~  217 (250)
                                 ..+...+......+.+..++..+.+||.+||+.||++||+    ++++   |+..|.....+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~L~~~~~~~~~~  308 (327)
T 3lxl_A          240 MMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPS----FSALGPQLDMLWSGSRGC  308 (327)
T ss_dssp             HCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHC-------
T ss_pred             hcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcC----HHHHHHHHHHHHhhhcCc
Confidence                       2333444555556667789999999999999999999999    5555   44455544443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.92  E-value=4.9e-25  Score=185.79  Aligned_cols=134  Identities=25%  Similarity=0.389  Sum_probs=95.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       155 ~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  191 (310)
T 2wqm_A          155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------  191 (310)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEECCC------------------------------------------------------
T ss_pred             CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc-------------------------------------------
Confidence            6899999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH--EL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~--~~  159 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+...  ..
T Consensus       192 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  245 (310)
T 2wqm_A          192 --------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS  245 (310)
T ss_dssp             ---------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH
T ss_pred             --------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH
Confidence                                      00123588999999999998899999999999999999999999976532  23


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+............++.++.+||.+||..||++||+    ++++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~il~  290 (310)
T 2wqm_A          246 LCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD----VTYVYD  290 (310)
T ss_dssp             HHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCC----HHHHHH
Confidence            333333333332233568999999999999999999999    776664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.92  E-value=8e-26  Score=190.70  Aligned_cols=144  Identities=24%  Similarity=0.387  Sum_probs=101.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++...............                                   
T Consensus       127 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~-----------------------------------  171 (310)
T 3s95_A          127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL-----------------------------------  171 (310)
T ss_dssp             TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----------------------------------------------
T ss_pred             CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccc-----------------------------------
Confidence            689999999999999999999999999986654332211000000                                   


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH--
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL--  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~--  159 (250)
                                          ............||+.|+|||++.+..++.++|||||||++|+|++|..||.......  
T Consensus       172 --------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~  231 (310)
T 3s95_A          172 --------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD  231 (310)
T ss_dssp             ----------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT
T ss_pred             --------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH
Confidence                                0000011123579999999999999889999999999999999999999986532111  


Q ss_pred             ---HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 ---TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ---~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                         ........    ..+..++..+.+||.+||+.||++||+    ++++++
T Consensus       232 ~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~l~~  275 (310)
T 3s95_A          232 FGLNVRGFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPS----FVKLEH  275 (310)
T ss_dssp             SSBCHHHHHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             Hhhhhhccccc----cCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence               11122221    123468999999999999999999999    776664

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=3.7e-25  Score=188.25  Aligned_cols=138  Identities=24%  Similarity=0.405  Sum_probs=96.8

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+||+++.++.+||+|||+++..........                                         
T Consensus       162 ~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~-----------------------------------------  200 (337)
T 3mdy_A          162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD-----------------------------------------  200 (337)
T ss_dssp             CEECSCCCGGGEEECTTSCEEECCCTTCEECC------------------------------------------------
T ss_pred             CEEecccchHHEEECCCCCEEEEeCCCceeecccccccc-----------------------------------------
Confidence            999999999999999999999999999865433211100                                         


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCch------hHHHHHHHHHHHHHhC--------
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSP------VDWWTLGIFLFELFYG--------  148 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DiwSlG~vl~elltg--------  148 (250)
                                              .......||+.|+|||++.+...+..      +|||||||++|+|++|        
T Consensus       201 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~  256 (337)
T 3mdy_A          201 ------------------------IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE  256 (337)
T ss_dssp             --------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred             ------------------------CCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence                                    00112468999999999987765544      9999999999999999        


Q ss_pred             --CCCCCCCC----hHHHHHHHHHhc-cCCCCC-----CCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          149 --VTPFRGVD----HELTLANIVARA-LEFPKE-----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       149 --~~pf~~~~----~~~~~~~i~~~~-~~~p~~-----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                        ..||....    .......++... .....+     ..++.++.+||.+||+.||++||+    +.+++++
T Consensus       257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~  325 (337)
T 3mdy_A          257 EYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT----ALRVKKT  325 (337)
T ss_dssp             CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred             cccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCC----HHHHHHH
Confidence              77775532    222333322221 111111     235567999999999999999999    7776653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=1.7e-25  Score=190.51  Aligned_cols=148  Identities=28%  Similarity=0.368  Sum_probs=98.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+|||++.++.+||+|||+++............                                       
T Consensus       140 ~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~---------------------------------------  180 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE---------------------------------------  180 (336)
T ss_dssp             CEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC-------------------------------------------
T ss_pred             ceeecccccceEEEcCCCcEEEeeccceeecccccccCccc---------------------------------------
Confidence            99999999999999999999999999986654321110000                                       


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-------CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-------EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                            .........||+.|+|||++.+       ..++.++|||||||++|+|++|..||...
T Consensus       181 ----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  238 (336)
T 3g2f_A          181 ----------------------EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG  238 (336)
T ss_dssp             ---------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred             ----------------------cccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence                                  0001113468999999999987       34567899999999999999997766332


Q ss_pred             C-----------------hHHHHHHHHHhccC-CCCCCC------CChHHHHHHHHhcccCccccCCCccChHHH-----
Q 025601          156 D-----------------HELTLANIVARALE-FPKEPA------VPATAKDLISQLLAKDPERRLGSTKGASAI-----  206 (250)
Q Consensus       156 ~-----------------~~~~~~~i~~~~~~-~p~~~~------~~~~~~~ll~~~L~~dP~~R~t~~~~a~~l-----  206 (250)
                      .                 .......++..... ...+..      ++..+.+||.+||+.||++|||    ++++     
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~e~l~~L~  314 (336)
T 3g2f_A          239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT----AQXAEERMA  314 (336)
T ss_dssp             SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCC----HHHHHHHHH
T ss_pred             cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcc----hHHHHHHHH
Confidence            1                 11122222222211 111111      3347999999999999999999    6666     


Q ss_pred             -hcCCCCCCC
Q 025601          207 -KHHPFFQGV  215 (250)
Q Consensus       207 -l~hp~~~~~  215 (250)
                       +.++|-++-
T Consensus       315 ~ll~~~~~~~  324 (336)
T 3g2f_A          315 ELMMIWERNK  324 (336)
T ss_dssp             HHHHCCCC--
T ss_pred             HHHHHHHhcc
Confidence             446776653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.92  E-value=1.9e-25  Score=187.46  Aligned_cols=137  Identities=21%  Similarity=0.255  Sum_probs=106.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++..........                                         
T Consensus       145 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-----------------------------------------  183 (302)
T 4e5w_A          145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY-----------------------------------------  183 (302)
T ss_dssp             TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEE-----------------------------------------
T ss_pred             CCcccCCCchheEEEcCCCCEEECcccccccccCCCcce-----------------------------------------
Confidence            689999999999999999999999999986543321100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCC-------
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRG-------  154 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~-------  154 (250)
                                               .......+|..|+|||++.+..++.++|||||||++|+|++|..|+..       
T Consensus       184 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  238 (302)
T 4e5w_A          184 -------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLK  238 (302)
T ss_dssp             -------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             -------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhh
Confidence                                     001123578889999999988899999999999999999999887532       


Q ss_pred             -------CChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          155 -------VDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       155 -------~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                             ......+...+......+.+..++..+.+||.+||+.||++|||    ++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~  295 (302)
T 4e5w_A          239 MIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTS----FQNLIE  295 (302)
T ss_dssp             HHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHH
T ss_pred             ccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCC----HHHHHH
Confidence                   22333344444555566667789999999999999999999999    666653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=6.3e-26  Score=192.83  Aligned_cols=140  Identities=17%  Similarity=0.281  Sum_probs=110.4

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.   +..+||+|||++.........                                       
T Consensus       159 ~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------  199 (327)
T 2yfx_A          159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY---------------------------------------  199 (327)
T ss_dssp             TTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------------------------------
T ss_pred             CCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc---------------------------------------
Confidence            68999999999999984   446999999987432111000                                       


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDH  157 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~  157 (250)
                                                  .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       200 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  251 (327)
T 2yfx_A          200 ----------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN  251 (327)
T ss_dssp             ------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ----------------------------ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH
Confidence                                        00012357889999999988889999999999999999998 9999998887


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      ......+... .....+..++..+.+||.+||+.||++||+    +.+++++.|+-
T Consensus       252 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~l~~~  302 (327)
T 2yfx_A          252 QEVLEFVTSG-GRMDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYC  302 (327)
T ss_dssp             HHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHH
T ss_pred             HHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHHHHHHH
Confidence            7666655543 334455678999999999999999999999    99999887754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=7.2e-25  Score=185.01  Aligned_cols=128  Identities=30%  Similarity=0.475  Sum_probs=92.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       153 ~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  190 (309)
T 2h34_A          153 AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT------------------------------------------  190 (309)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECSCCC----------------------------------------------------
T ss_pred             CcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc------------------------------------------
Confidence            68999999999999999999999999987543321100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .+
T Consensus       191 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~  243 (309)
T 2h34_A          191 --------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-VM  243 (309)
T ss_dssp             --------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-HH
T ss_pred             --------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-HH
Confidence                                      001235889999999999888999999999999999999999999886655 33


Q ss_pred             HHHHHhccCC--CCCCCCChHHHHHHHHhcccCccccC-C
Q 025601          162 ANIVARALEF--PKEPAVPATAKDLISQLLAKDPERRL-G  198 (250)
Q Consensus       162 ~~i~~~~~~~--p~~~~~~~~~~~ll~~~L~~dP~~R~-t  198 (250)
                      ...+......  .....++..+.+||.+||+.||++|| +
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s  283 (309)
T 2h34_A          244 GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT  283 (309)
T ss_dssp             HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSS
T ss_pred             HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHh
Confidence            3333433222  22356899999999999999999999 5

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=2.8e-25  Score=188.30  Aligned_cols=136  Identities=20%  Similarity=0.283  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       153 ~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------------------  192 (318)
T 3lxp_A          153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR----------------------------------------  192 (318)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE----------------------------------------
T ss_pred             CCccCCCCchheEEEcCCCCEEECCccccccccccccccc----------------------------------------
Confidence            6899999999999999999999999999865433211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH---
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE---  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~---  158 (250)
                                                ......+|..|+|||++.+..++.++|||||||++|+|++|..||......   
T Consensus       193 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~  246 (318)
T 3lxp_A          193 --------------------------VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE  246 (318)
T ss_dssp             --------------------------C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH
T ss_pred             --------------------------cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh
Confidence                                      001124778899999999888999999999999999999999999653211   


Q ss_pred             -----------HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          159 -----------LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       159 -----------~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                                 ..+...+......+.+..++..+.+||.+||+.||++||+    +++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell  302 (318)
T 3lxp_A          247 LIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT----FENLI  302 (318)
T ss_dssp             HHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             hhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcC----HHHHH
Confidence                       1233344455566667789999999999999999999999    66665

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.91  E-value=8.1e-25  Score=202.39  Aligned_cols=133  Identities=31%  Similarity=0.484  Sum_probs=107.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++.........                                         
T Consensus       510 ~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~-----------------------------------------  548 (656)
T 2j0j_A          510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK-----------------------------------------  548 (656)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------------------------------------------
T ss_pred             CCccccccchHhEEEeCCCCEEEEecCCCeecCCCccee-----------------------------------------
Confidence            699999999999999999999999999986643221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                 .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       549 ---------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~  601 (656)
T 2j0j_A          549 ---------------------------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV  601 (656)
T ss_dssp             --------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             ---------------------------ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence                                       001246788999999998889999999999999999997 9999999888887


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...+.... ..+.+..++..+.+||.+||..||++||+    +.+++
T Consensus       602 ~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~RPs----~~el~  643 (656)
T 2j0j_A          602 IGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELK  643 (656)
T ss_dssp             HHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence            77766543 44556689999999999999999999999    66554

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.91  E-value=3.9e-26  Score=193.85  Aligned_cols=136  Identities=22%  Similarity=0.269  Sum_probs=98.0

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||+||||||+||+++.++.+||+|||+++........                                           
T Consensus       154 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------  190 (326)
T 3uim_A          154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------------  190 (326)
T ss_dssp             CEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC-------------------------------------------
T ss_pred             CeEeCCCchhhEEECCCCCEEeccCccccccCccccc-------------------------------------------
Confidence            9999999999999999999999999998654321110                                           


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC----ChH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV----DHE  158 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~----~~~  158 (250)
                                               ......||+.|+|||++.+..++.++|||||||++|+|++|..||...    ...
T Consensus       191 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  245 (326)
T 3uim_A          191 -------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD  245 (326)
T ss_dssp             -------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred             -------------------------ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc
Confidence                                     011235899999999998888999999999999999999999999521    111


Q ss_pred             HHHHHHHHhccCC-------------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          159 LTLANIVARALEF-------------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       159 ~~~~~i~~~~~~~-------------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ......+......             ......+..+.+|+.+||+.||++|||    ++++++|-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~L  306 (326)
T 3uim_A          246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK----MSEVVRML  306 (326)
T ss_dssp             SBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCC----HHHHHHHH
T ss_pred             hhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCC----HHHHHHHh
Confidence            1111111111110             011122367899999999999999999    77776654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.91  E-value=1.4e-25  Score=190.23  Aligned_cols=137  Identities=20%  Similarity=0.205  Sum_probs=98.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       158 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  195 (321)
T 2qkw_B          158 RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT------------------------------------------  195 (321)
T ss_dssp             TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC------------------------------------------
T ss_pred             CCeecCCCCHHHEEECCCCCEEEeeccccccccccccc------------------------------------------
Confidence            68999999999999999999999999988543211100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH-
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT-  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~-  160 (250)
                                               .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...... 
T Consensus       196 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~  250 (321)
T 2qkw_B          196 -------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV  250 (321)
T ss_dssp             -------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC
T ss_pred             -------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH
Confidence                                     001123589999999999888899999999999999999999999976432211 


Q ss_pred             --HH--HHHHhccCC----------CCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 --LA--NIVARALEF----------PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 --~~--~i~~~~~~~----------p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                        ..  .........          .....++..+.+|+.+||+.||++||+    +++++.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~  309 (321)
T 2qkw_B          251 NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS----MGDVLWK  309 (321)
T ss_dssp             CHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence              00  000111110          111224567889999999999999999    7777653

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=6.2e-25  Score=182.44  Aligned_cols=131  Identities=25%  Similarity=0.376  Sum_probs=103.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++........                                           
T Consensus       141 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------  177 (284)
T 2a19_B          141 KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-------------------------------------------  177 (284)
T ss_dssp             TTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC-------------------------------------------
T ss_pred             CCeeeccCCHHHEEEcCCCCEEECcchhheecccccc-------------------------------------------
Confidence            6899999999999999999999999998754332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                 .....+|+.|+|||++.+..++.++|||||||++|+|++|..||...  ....
T Consensus       178 ---------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~  228 (284)
T 2a19_B          178 ---------------------------RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFF  228 (284)
T ss_dssp             ---------------------------CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHH
T ss_pred             ---------------------------ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHH
Confidence                                       00125889999999999988999999999999999999999887431  1222


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      ..+...    .....++..+.+||.+||+.||++||+    +.+++++.+.
T Consensus       229 ~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~~l~~  271 (284)
T 2a19_B          229 TDLRDG----IISDIFDKKEKTLLQKLLSKKPEDRPN----TSEILRTLTV  271 (284)
T ss_dssp             HHHHTT----CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHH
T ss_pred             HHhhcc----cccccCCHHHHHHHHHHccCChhhCcC----HHHHHHHHHH
Confidence            222221    223468999999999999999999999    9999888664

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.90  E-value=4.4e-25  Score=188.28  Aligned_cols=139  Identities=22%  Similarity=0.350  Sum_probs=97.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       166 ~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~----------------------------------------  205 (342)
T 1b6c_B          166 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----------------------------------------  205 (342)
T ss_dssp             CEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEE----------------------------------------
T ss_pred             CCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccc----------------------------------------
Confidence            5899999999999999999999999999854322110000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC------CCchhHHHHHHHHHHHHHhC-------
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG------HGSPVDWWTLGIFLFELFYG-------  148 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~vl~elltg-------  148 (250)
                                               .......||+.|+|||++.+..      ++.++|||||||++|+|++|       
T Consensus       206 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~  260 (342)
T 1b6c_B          206 -------------------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  260 (342)
T ss_dssp             -------------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred             -------------------------cccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence                                     0011236899999999998753      23789999999999999999       


Q ss_pred             ---CCCCCCCC----hHHHHHHHH-HhccCCCCC-----CCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          149 ---VTPFRGVD----HELTLANIV-ARALEFPKE-----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       149 ---~~pf~~~~----~~~~~~~i~-~~~~~~p~~-----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                         ..||....    ....+...+ ........+     ..++..+.+||.+||+.||++||+    +++++++
T Consensus       261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i~~~  330 (342)
T 1b6c_B          261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKKT  330 (342)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC----HHHHHHH
T ss_pred             cccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC----HHHHHHH
Confidence               78987642    223333332 222221111     123457899999999999999999    7666653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=3.3e-25  Score=203.59  Aligned_cols=142  Identities=25%  Similarity=0.418  Sum_probs=104.4

Q ss_pred             ccceeecCCCCcEEeCCCCC---eeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGH---IMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~---~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+||+++.++.   +||+|||++.......                                         
T Consensus       140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-----------------------------------------  178 (676)
T 3qa8_A          140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-----------------------------------------  178 (676)
T ss_dssp             TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC-----------------------------------------
T ss_pred             CCCccCCCCHHHeEeecCCCceeEEEccccccccccccc-----------------------------------------
Confidence            68999999999999997664   8999999985432211                                         


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus       179 -----------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~  229 (676)
T 3qa8_A          179 -----------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP  229 (676)
T ss_dssp             -----------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH
T ss_pred             -----------------------------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch
Confidence                                         001246899999999999888999999999999999999999999875433


Q ss_pred             HHHHHHH--------------HhccCC----CCC----CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIV--------------ARALEF----PKE----PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~--------------~~~~~~----p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ..+....              .+...+    +.+    ..++..+.+||.+||..||++|||    +++++.||||+.++
T Consensus       230 ~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPT----a~elL~hp~F~~l~  305 (676)
T 3qa8_A          230 VQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGT----DPQNPNVGCFQALD  305 (676)
T ss_dssp             HHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---C----CTTCCCCTTHHHHH
T ss_pred             hhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcC----HHHHhcCHHHHHHH
Confidence            2211100              000001    111    225678999999999999999999    99999999999864


Q ss_pred             c
Q 025601          217 W  217 (250)
Q Consensus       217 ~  217 (250)
                      .
T Consensus       306 ~  306 (676)
T 3qa8_A          306 S  306 (676)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.90  E-value=3.8e-25  Score=186.91  Aligned_cols=144  Identities=24%  Similarity=0.359  Sum_probs=103.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...............                                    
T Consensus       153 ~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~------------------------------------  196 (317)
T 2buj_A          153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT------------------------------------  196 (317)
T ss_dssp             TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHH------------------------------------
T ss_pred             CCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccccc------------------------------------
Confidence            68999999999999999999999999987554322111000000                                    


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCh-
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG---HGSPVDWWTLGIFLFELFYGVTPFRGVDH-  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~vl~elltg~~pf~~~~~-  157 (250)
                                              ........||+.|+|||++.+..   ++.++|||||||++|+|++|..||..... 
T Consensus       197 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  252 (317)
T 2buj_A          197 ------------------------LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK  252 (317)
T ss_dssp             ------------------------HHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT
T ss_pred             ------------------------ccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc
Confidence                                    00000125789999999987654   68999999999999999999999953210 


Q ss_pred             HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .......+......+....++..+.+||.+||+.||++||+    +++++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~  300 (317)
T 2buj_A          253 GDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH----IPLLLSQ  300 (317)
T ss_dssp             TSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             cchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCC----HHHHHHH
Confidence            01122233344455666778999999999999999999999    7777753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.5e-24  Score=184.26  Aligned_cols=136  Identities=17%  Similarity=0.294  Sum_probs=103.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++...........                                        
T Consensus       164 ~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~----------------------------------------  203 (326)
T 2w1i_A          164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYK----------------------------------------  203 (326)
T ss_dssp             TTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEE----------------------------------------
T ss_pred             CCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccc----------------------------------------
Confidence            6899999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh----
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH----  157 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~----  157 (250)
                                                ......++..|+|||++.+..++.++|||||||++|+|++|..||.....    
T Consensus       204 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~  257 (326)
T 2w1i_A          204 --------------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR  257 (326)
T ss_dssp             --------------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHH
T ss_pred             --------------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                                      00012467789999999988889999999999999999999998864211    


Q ss_pred             -----------HHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          158 -----------ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       158 -----------~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                                 ...+...+......+.+..++.++.+||.+||+.||++||+    +++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~el~  314 (326)
T 2w1i_A          258 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS----FRDLA  314 (326)
T ss_dssp             HHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCC----HHHHH
T ss_pred             hhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcC----HHHHH
Confidence                       11222334444455666789999999999999999999999    66655

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.90  E-value=1.2e-24  Score=182.73  Aligned_cols=85  Identities=25%  Similarity=0.496  Sum_probs=61.7

Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH----hccCCCCC--CCCChHHHHHHHHhcccCccccCCCcc
Q 025601          128 GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA----RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       128 ~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~----~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .++.++|||||||++|+|++|..||.+.........+..    .....+..  ..++.++.+||.+||+.||++||+   
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps---  250 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT---  250 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC---
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCC---
Confidence            367899999999999999999999987654433211111    11111110  468999999999999999999999   


Q ss_pred             ChHHHhcCCCCCCCC
Q 025601          202 GASAIKHHPFFQGVN  216 (250)
Q Consensus       202 ~a~~ll~hp~~~~~~  216 (250)
                       ++++++||||.+..
T Consensus       251 -~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          251 -ITEFMNHPWIMQST  264 (299)
T ss_dssp             -HHHHHTSHHHHTGG
T ss_pred             -HHHHhcChhhcccc
Confidence             99999999998743

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.90  E-value=7e-25  Score=184.48  Aligned_cols=135  Identities=22%  Similarity=0.338  Sum_probs=97.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||++.........                                          
T Consensus       152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------  189 (307)
T 2nru_A          152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------  189 (307)
T ss_dssp             TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred             CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence            68999999999999999999999999987543221100                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               .......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+......+
T Consensus       190 -------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  243 (307)
T 2nru_A          190 -------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL  243 (307)
T ss_dssp             -------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred             -------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence                                     001123689999999988754 789999999999999999999999875533222


Q ss_pred             HHHHHhcc------------C-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          162 ANIVARAL------------E-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       162 ~~i~~~~~------------~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ..+.....            . ......++..+.+++.+||+.||++||+    ++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~l~~  299 (307)
T 2nru_A          244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD----IKKVQQ  299 (307)
T ss_dssp             THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred             HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence            22211100            0 0111234567899999999999999999    766654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.89  E-value=2.2e-24  Score=186.08  Aligned_cols=128  Identities=13%  Similarity=0.146  Sum_probs=95.3

Q ss_pred             CccceeecCCCCcEEeCC-----------CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCcc
Q 025601            1 MLGIVYRDLKPENVLVRS-----------DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASC   69 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-----------~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (250)
                      ++|||||||||+|||++.           ++.+||+|||+++.+......                              
T Consensus       190 ~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------  239 (365)
T 3e7e_A          190 DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKG------------------------------  239 (365)
T ss_dssp             TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTT------------------------------
T ss_pred             hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCC------------------------------
Confidence            479999999999999988           899999999998543211100                              


Q ss_pred             ccCCCCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCC
Q 025601           70 IIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                           ......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       240 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  282 (365)
T 3e7e_A          240 -------------------------------------TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT  282 (365)
T ss_dssp             -------------------------------------EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred             -------------------------------------ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence                                                 0111346899999999999998999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          150 TPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       150 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .||........     .....+. ....++.+.+++..||..+|.+|+...+
T Consensus       283 ~pf~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~  328 (365)
T 3e7e_A          283 YMKVKNEGGEC-----KPEGLFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLD  328 (365)
T ss_dssp             CCCEEEETTEE-----EECSCCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHH
T ss_pred             CccccCCCCce-----eechhcc-ccCcHHHHHHHHHHHcCCCCCCcchHHH
Confidence            99965332110     0001111 1134678899999999999999977433

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.89  E-value=5.9e-25  Score=191.89  Aligned_cols=129  Identities=26%  Similarity=0.499  Sum_probs=96.2

Q ss_pred             ccceeecCCCCcEEe----CCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLV----RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill----~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +||+||||||+||++    +.++.+||+|||+++.......                                       
T Consensus       131 ~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------------------  171 (396)
T 4eut_A          131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------------------------------------  171 (396)
T ss_dssp             TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG---------------------------------------
T ss_pred             CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc---------------------------------------
Confidence            689999999999999    6777899999999855432110                                       


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--------CCCCchhHHHHHHHHHHHHHhCC
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--------EGHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                     .....||+.|+|||++.+        ..++.++|||||||++|+|++|.
T Consensus       172 -------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~  220 (396)
T 4eut_A          172 -------------------------------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS  220 (396)
T ss_dssp             -------------------------------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             -------------------------------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCC
Confidence                                           112368999999999865        44788999999999999999999


Q ss_pred             CCCCCC----ChHHHHHHHHHhccC-------------------CCCC----CCCChHHHHHHHHhcccCccccCCCc
Q 025601          150 TPFRGV----DHELTLANIVARALE-------------------FPKE----PAVPATAKDLISQLLAKDPERRLGST  200 (250)
Q Consensus       150 ~pf~~~----~~~~~~~~i~~~~~~-------------------~p~~----~~~~~~~~~ll~~~L~~dP~~R~t~~  200 (250)
                      .||.+.    ...+.+.+++.+...                   .+..    ..++..+.+||.+||+.||++|+++.
T Consensus       221 ~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~  298 (396)
T 4eut_A          221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD  298 (396)
T ss_dssp             CSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHH
T ss_pred             CCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHH
Confidence            999643    344555555554321                   1111    12345678999999999999999944

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.88  E-value=3.1e-24  Score=183.14  Aligned_cols=128  Identities=17%  Similarity=0.231  Sum_probs=95.0

Q ss_pred             ccceeecCCCCcEEeCCCC--------------------CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDG--------------------HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH   61 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~--------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (250)
                      +|||||||||+|||++.++                    .+||+|||+++.....                         
T Consensus       181 ~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------------------------  235 (336)
T 2vuw_A          181 LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------------------------  235 (336)
T ss_dssp             HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------------------------
T ss_pred             CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------------------------
Confidence            6999999999999999887                    8999999998543210                         


Q ss_pred             CCccCCccccCCCCCCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHH
Q 025601           62 PPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIF  141 (250)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~v  141 (250)
                                                                       ..+||+.|+|||++.+.. +.++||||++++
T Consensus       236 -------------------------------------------------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~  265 (336)
T 2vuw_A          236 -------------------------------------------------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKK  265 (336)
T ss_dssp             -------------------------------------------------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHH
T ss_pred             -------------------------------------------------cEEEeecccChhhhcCCC-ccceehhhhhCC
Confidence                                                             126899999999998876 899999998776


Q ss_pred             -HHHHHhCCCCCCCCCh-HHHHHHHHHhcc-CCCC----CCCCChHHHHHHHHhcccCccccCCCccChHHHh-cCCCCC
Q 025601          142 -LFELFYGVTPFRGVDH-ELTLANIVARAL-EFPK----EPAVPATAKDLISQLLAKDPERRLGSTKGASAIK-HHPFFQ  213 (250)
Q Consensus       142 -l~elltg~~pf~~~~~-~~~~~~i~~~~~-~~p~----~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll-~hp~~~  213 (250)
                       .+++++|..||.+... ......+..... ....    ...+++++.+||.+||++|     |    |+++| +||||+
T Consensus       266 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----s----a~e~l~~Hp~f~  336 (336)
T 2vuw_A          266 ENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----S----ATDLLCQHSLFK  336 (336)
T ss_dssp             HHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----S----HHHHHHHCGGGC
T ss_pred             CCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----C----HHHHHhcCCCcC
Confidence             6778889999854211 112223332211 1111    1236788999999999987     6    99999 999995

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.1e-22  Score=189.09  Aligned_cols=126  Identities=23%  Similarity=0.298  Sum_probs=95.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+ .+||+|||+++.....                                             
T Consensus       201 ~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---------------------------------------------  234 (681)
T 2pzi_A          201 IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---------------------------------------------  234 (681)
T ss_dssp             TTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC---------------------------------------------
T ss_pred             CCCeecccChHHeEEeCC-cEEEEecccchhcccC---------------------------------------------
Confidence            699999999999999875 8999999988543211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                  ....||+.|+|||++.+. .+.++|||||||++|+|++|..||.+.....  
T Consensus       235 ----------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--  283 (681)
T 2pzi_A          235 ----------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--  283 (681)
T ss_dssp             ----------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--
T ss_pred             ----------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--
Confidence                                        123689999999998765 4899999999999999999998887532110  


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                            .........++..+.+||.+||+.||++||+    ..+.+.|+|+..
T Consensus       284 ------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~  326 (681)
T 2pzi_A          284 ------LPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT----TAEEMSAQLTGV  326 (681)
T ss_dssp             ------CCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHH
T ss_pred             ------ccccccccccCHHHHHHHhhhccCChhhCCC----HHHHHHHHHHHH
Confidence                  0000000123578999999999999999999    666667777643

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.78  E-value=3.2e-20  Score=155.09  Aligned_cols=75  Identities=17%  Similarity=0.138  Sum_probs=54.2

Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHhccCC--CCCCCCChHHHHHHHHhcccCccccCCCccCh
Q 025601          129 HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA---NIVARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGA  203 (250)
Q Consensus       129 ~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~---~i~~~~~~~--p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a  203 (250)
                      ++.++|||||||++|+|++|+.||.+......+.   +.+......  .....++.++.+||.+||+.||++| |    +
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s----~  253 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-S----A  253 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-C----H
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-C----H
Confidence            6899999999999999999999998765432110   111111110  0124689999999999999999999 9    6


Q ss_pred             HHHhc
Q 025601          204 SAIKH  208 (250)
Q Consensus       204 ~~ll~  208 (250)
                      +++++
T Consensus       254 ~el~~  258 (286)
T 3uqc_A          254 STLLN  258 (286)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.63  E-value=2.5e-18  Score=156.46  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=47.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       357 ~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~------------------------------------------  394 (569)
T 4azs_A          357 KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS------------------------------------------  394 (569)
T ss_dssp             HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C------------------------------------------
T ss_pred             HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc------------------------------------------
Confidence            37999999999999999999999999999865432211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV  149 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~  149 (250)
                                                 ...+.+||+.|+|||++.+. +..++|+||+|++++++.++.
T Consensus       395 ---------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          395 ---------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ---------------------------CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             ---------------------------cccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence                                       01134799999999999875 567899999999988765543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.10  E-value=5.2e-12  Score=114.20  Aligned_cols=87  Identities=21%  Similarity=0.242  Sum_probs=64.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.  .+||+|||+++.............                                     
T Consensus       450 ~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~-------------------------------------  490 (540)
T 3en9_A          450 NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLI-------------------------------------  490 (540)
T ss_dssp             TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHH-------------------------------------
T ss_pred             CcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchh-------------------------------------
Confidence            69999999999999988  999999999977654322110000                                     


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC--CCCCchhHHHHHHHHHHHHHhCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPF  152 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~vl~elltg~~pf  152 (250)
                                               ....++.||+.|+|||++.+  ..|+..+|+|+..+-..+.+.++.++
T Consensus       491 -------------------------~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          491 -------------------------VFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             -------------------------HHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             -------------------------hhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                                     00012479999999999987  55788889999888877776665544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.77  E-value=5.1e-10  Score=92.95  Aligned_cols=28  Identities=46%  Similarity=0.551  Sum_probs=27.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      +|||||||||+|||++ ++.+||+|||++
T Consensus       212 ~giiHrDlkp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          212 RGIVHGDLSQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             TTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred             CCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence            6999999999999999 999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.27  E-value=4.2e-07  Score=74.19  Aligned_cols=33  Identities=15%  Similarity=0.234  Sum_probs=29.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCC
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      ++|||||||||+|||++.  .++|+|||++.....
T Consensus       189 ~~givHrDlkp~NILl~~--~~~liDFG~a~~~~~  221 (258)
T 1zth_A          189 EAELVHADLSEYNIMYID--KVYFIDMGQAVTLRH  221 (258)
T ss_dssp             TSCEECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred             HCCEEeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence            369999999999999987  999999999976543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.23  E-value=7.3e-05  Score=64.48  Aligned_cols=30  Identities=20%  Similarity=0.428  Sum_probs=25.6

Q ss_pred             ccceeecCCCCcEEeCCCC----------CeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDG----------HIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----------~~kl~dfgl~~   31 (250)
                      +|||||||||.|||++.+|          .+.|.||+=+-
T Consensus       224 ~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          224 HGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             TTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             CCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            6999999999999998766          37899998553

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.39  E-value=0.00089  Score=53.56  Aligned_cols=28  Identities=14%  Similarity=0.046  Sum_probs=24.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      +++|+|++|.||+++.++.+.|.||+.+
T Consensus       185 ~l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             EEECCCCCCCcEEEECCcEEEEEcchhc
Confidence            5999999999999977666779999986

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.29  E-value=0.00044  Score=57.31  Aligned_cols=31  Identities=13%  Similarity=0.231  Sum_probs=26.1

Q ss_pred             ccceeecCCCCcEEeCC--CCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~--~~~~kl~dfgl~~~   32 (250)
                      ..++|+|+++.||+++.  ++.+.|.||+.+..
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            36899999999999987  45678999998744

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.69  E-value=0.004  Score=50.08  Aligned_cols=29  Identities=24%  Similarity=0.232  Sum_probs=24.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      .+++|+|+++.||+++.++.+.|.||+.+
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence            46899999999999976556679999876

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.37  E-value=0.0071  Score=51.09  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=26.2

Q ss_pred             ccceeecCCCCcEEeCCCCC--eeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGH--IMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~--~kl~dfgl~~~   32 (250)
                      .++||+|+++.||+++.++.  +.|.||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            47999999999999987653  68999998754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.81  E-value=0.013  Score=48.64  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=27.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+++.||+++.++.+.|.||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            4799999999999998888999999997643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=93.74  E-value=0.027  Score=48.72  Aligned_cols=30  Identities=23%  Similarity=0.369  Sum_probs=26.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+++.||+++.++ +.+.||+.+..
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            4689999999999998776 99999987744

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=93.25  E-value=0.026  Score=46.73  Aligned_cols=30  Identities=30%  Similarity=0.388  Sum_probs=25.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .++||+|+.+.||+++.++.+.|.||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            478999999999999876666899998763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.11  E-value=0.038  Score=44.36  Aligned_cols=29  Identities=14%  Similarity=0.060  Sum_probs=25.0

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .++|+|+.+.||+++.++.+-|.||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            47999999999999877777899998763

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.46  E-value=0.42  Score=37.58  Aligned_cols=55  Identities=13%  Similarity=0.076  Sum_probs=34.9

Q ss_pred             CCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhccCCCCCCCCChHHHHHHHHhccc
Q 025601          117 EYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAK  191 (250)
Q Consensus       117 ~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~  191 (250)
                      .+.+||... ...+.+.-|||||+++|.-+.-..                   +...+..+++.+.+||..|..-
T Consensus       102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL-------------------~e~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL-------------------KENEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTC-------------------CTTEEECCCHHHHHHHHHHTTC
T ss_pred             CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC-------------------CcccchhhCHHHHHHHHHHHhc
Confidence            456777653 234688899999999998764221                   2223346788888888888766

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.27  E-value=0.056  Score=44.61  Aligned_cols=31  Identities=19%  Similarity=0.290  Sum_probs=25.4

Q ss_pred             cceeecCCCCcEEeCC---CCC-eeeccccCCccC
Q 025601            3 GIVYRDLKPENVLVRS---DGH-IMLTDFDLSLKC   33 (250)
Q Consensus         3 giiHrDIKp~Nill~~---~~~-~kl~dfgl~~~~   33 (250)
                      +++|+|+++.||+++.   ++. +.|.||+.+..-
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence            6899999999999987   355 489999977543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=92.18  E-value=0.054  Score=45.08  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=27.6

Q ss_pred             ccceeecCCCCcEEeCCC----CCeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSD----GHIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~----~~~kl~dfgl~~~~~~   35 (250)
                      .+++|+|+.+.||+++.+    +.+.|.||+.+..-..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            368999999999999864    6789999998754433

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=92.12  E-value=0.041  Score=46.25  Aligned_cols=31  Identities=19%  Similarity=0.290  Sum_probs=25.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++.++.+.|.||+.+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            3689999999999998544578999987743

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=90.90  E-value=0.094  Score=43.36  Aligned_cols=29  Identities=28%  Similarity=0.277  Sum_probs=24.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+++.||+++ + .+.|.||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            3689999999999998 5 889999987643

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.75  E-value=0.1  Score=44.11  Aligned_cols=29  Identities=24%  Similarity=0.376  Sum_probs=23.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .+++|+|+++.||+++.++ +.|.||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            3689999999999997544 8999998764

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.05  E-value=0.11  Score=43.66  Aligned_cols=31  Identities=26%  Similarity=0.412  Sum_probs=26.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++.++.+.|.||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3689999999999998888899999987643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=88.88  E-value=0.14  Score=44.50  Aligned_cols=29  Identities=24%  Similarity=0.446  Sum_probs=24.0

Q ss_pred             cceeecCCCCcEEeCCC----------------------------CCeeeccccCCc
Q 025601            3 GIVYRDLKPENVLVRSD----------------------------GHIMLTDFDLSL   31 (250)
Q Consensus         3 giiHrDIKp~Nill~~~----------------------------~~~kl~dfgl~~   31 (250)
                      +++|+|+.+.||+++.+                            +.+.|.||..+.
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~  306 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  306 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence            68999999999999875                            678999998763

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=88.84  E-value=0.18  Score=42.97  Aligned_cols=30  Identities=10%  Similarity=0.212  Sum_probs=24.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .+++|+|+.+.||+++.++ +.+.||..+..
T Consensus       227 ~~L~HGDl~~~Nil~~~~~-~~lID~e~a~~  256 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  256 (397)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CceeeCCCCcCcEEEeCCC-eEEEeCccccc
Confidence            3689999999999997654 88999987644

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=88.64  E-value=0.2  Score=43.93  Aligned_cols=15  Identities=20%  Similarity=0.215  Sum_probs=14.1

Q ss_pred             cceeecCCCCcEEeC
Q 025601            3 GIVYRDLKPENVLVR   17 (250)
Q Consensus         3 giiHrDIKp~Nill~   17 (250)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            689999999999998

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=88.48  E-value=0.17  Score=41.33  Aligned_cols=29  Identities=21%  Similarity=0.195  Sum_probs=24.5

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .++|+|+.+.||+ ..++.+.+.||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            5899999999999 5667789999987744

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=88.02  E-value=0.22  Score=42.60  Aligned_cols=30  Identities=30%  Similarity=0.514  Sum_probs=26.1

Q ss_pred             ccceeecCCCCcEEeCCC----CCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSD----GHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~----~~~kl~dfgl~~   31 (250)
                      ..++|+|+.+.||+++.+    +.+.+.||..+.
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            368999999999999876    789999998773

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.37  E-value=0.57  Score=40.11  Aligned_cols=29  Identities=28%  Similarity=0.426  Sum_probs=24.3

Q ss_pred             cceeecCCCCcEEe------CCCCCeeeccccCCc
Q 025601            3 GIVYRDLKPENVLV------RSDGHIMLTDFDLSL   31 (250)
Q Consensus         3 giiHrDIKp~Nill------~~~~~~kl~dfgl~~   31 (250)
                      .++|.|+.+.||++      +.++.+.+.||.++.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46899999999999      345779999998873

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=81.30  E-value=0.59  Score=40.52  Aligned_cols=29  Identities=28%  Similarity=0.502  Sum_probs=25.3

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      ..++|+|+.+.||+ +.++.+.+.||..+.
T Consensus       262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             ceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            36899999999999 777889999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-35
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-05
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-34
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.001
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-32
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-31
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-30
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-28
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-27
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-07
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-27
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-04
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-26
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-26
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-26
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.002
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-24
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-23
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-23
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-23
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-21
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	0.001
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.002
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-20
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	8e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.002
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-17
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-17
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-16
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-16
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-16
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-04
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-15
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-07
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-15
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-14
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-14
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.001
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-14
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-14
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-13
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-13
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-04
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-12
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-12
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-08

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 7e-35
 Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 4/124 (3%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R+ SFVGT +Y++PE+++ +      D W LG  +++L  G+ PFR  +  L    I+  
Sbjct: 166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK--GASAIKHHPFFQGVNWALLRCTTP 225
             +FP++      A+DL+ +LL  D  +RLG  +  G   +K HPFF+ V W  L   TP
Sbjct: 226 EYDFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTP 283

Query: 226 PFVP 229
           P + 
Sbjct: 284 PKLT 287

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 4   IVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
           I++RDLKPEN+L+  D HI +TDF  +      +  A+
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 9e-34
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 7/144 (4%)

Query: 97  GPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVD 156
           G        D ++ +F GT +Y+APEI+ G+ +   VDWW+ G+ L+E+  G +PF G D
Sbjct: 148 GMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 207

Query: 157 HELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN 216
            E    +I      +P+   +   AKDL+ +L  ++PE+RLG       I+ HP F+ +N
Sbjct: 208 EEELFHSIRMDNPFYPRW--LEKEAKDLLVKLFVREPEKRLGV---RGDIRQHPLFREIN 262

Query: 217 WALL--RCTTPPFVPPPFNRELVS 238
           W  L  +   PPF P   +    S
Sbjct: 263 WEELERKEIDPPFRPKVKSPFDCS 286

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 16/28 (57%), Positives = 21/28 (75%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLS 30
           GIVYRDLK +N+L+  DGHI + DF + 
Sbjct: 123 GIVYRDLKLDNILLDKDGHIKIADFGMC 150

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 2e-32
 Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
              +F GT EYLAPE++    +G  VDWW LG+ ++E+  G  PF   DHE     I+  
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 220

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTT 224
            + FP+   +   AK L++ LL KDP++RLG     A  +  H FF  +NW  +  +   
Sbjct: 221 EIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLL 278

Query: 225 PPFVPPPFNRELVS-------DESCPETPVEYY 250
           PPF P   +             +S   TP + Y
Sbjct: 279 PPFKPQVTSEVDTRYFDDEFTAQSITITPPDRY 311

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQII 43
            +VYRD+K EN+++  DGHI +TDF L  +     +  +  
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 165

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  115 bits (290), Expect = 1e-31
 Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           V   + +  GT +Y+APE+VS + +   +DWW+ GI ++E+  G TPF   +   T   I
Sbjct: 154 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 213

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           +   L FP  P      KDL+S+L+ +D  +RLG+ + G   +K+HP+F+ V W  L  R
Sbjct: 214 LNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSR 271

Query: 222 CTTPPFVPPPFNRE 235
               P+ PP    +
Sbjct: 272 NIETPYEPPIQQGQ 285

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.0 bits (111), Expect = 8e-07
 Identities = 21/55 (38%), Positives = 27/55 (49%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
            I+YRDLKPEN+L+  +GHI +TDF  +    D         D   P  V    Y
Sbjct: 124 DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPY 178

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 3e-30
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
              +  GT E++APEIV+ E  G   D W++G+  + L  G +PF G   + TLAN+ A 
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231

Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
             EF  E      A AKD I +LL KDP++R+           HP+ +  +    +  + 
Sbjct: 232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM----TIQDSLQHPWIKPKDTQ--QALSS 285

Query: 226 PFVPPPF 232
            +  P F
Sbjct: 286 AWSHPQF 292

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 4e-28
 Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 7/129 (5%)

Query: 109 SMSFVGTHEYLAPEIVSG--EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +  F GT EY+AP+IV G   GH   VDWW+LG+ ++EL  G +PF     + + A I  
Sbjct: 187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 246

Query: 167 RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--R 221
           R L+        + A AKDLI +LL KDP++RLG     A  IK H FFQ +NW  L  +
Sbjct: 247 RILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAK 306

Query: 222 CTTPPFVPP 230
               PF P 
Sbjct: 307 KVPAPFKPV 315

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  107 bits (269), Expect = 4e-28
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 5/137 (3%)

Query: 108 RSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
           +  + VGTH Y+APE +  G  + S  DW++LG  LF+L  G +PFR    +        
Sbjct: 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM 220

Query: 167 RALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RC 222
                 + P       + L+  LL +D  RRLG    GA  +K  PFF+ ++W ++  + 
Sbjct: 221 TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQK 280

Query: 223 TTPPFVPPPFNRELVSD 239
             PP +PP         
Sbjct: 281 YPPPLIPPRGEVNAADA 297

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
            +VYRDLKP N+L+   GH+ ++D  L+        +A + +       VLQ     D  
Sbjct: 127 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSS 186

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (264), Expect = 1e-27
 Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 5/134 (3%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R+ +  GT E LAPEI+  +G+   VDWW LG+ ++E+  G  PF           IV+ 
Sbjct: 194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTT 224
            + FP      +  KDL+  LL  D  +R G+ K G + IK+H +F   +W  +  R   
Sbjct: 254 KVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVE 311

Query: 225 PPFVPPPFNRELVS 238
            PF+P        S
Sbjct: 312 APFIPKFKGPGDTS 325

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.9 bits (113), Expect = 4e-07
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY--LV 59
           L ++YRDLKPEN+L+   G+I +TDF  + +            +   P  +L   Y   V
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219

Query: 60  DHPPF 64
           D    
Sbjct: 220 DWWAL 224

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  105 bits (263), Expect = 2e-27
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 6/143 (4%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
                 GT E+ APE+  G+  G   D W++G+  + L  G++PF G + + TL N+ + 
Sbjct: 181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC 240

Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTP 225
                      +    KD I +LL  DP  R+           HP+    N        P
Sbjct: 241 DWNMDDSAFSGISEDGKDFIRKLLLADPNTRM----TIHQALEHPWLTPGNAPGRDSQIP 296

Query: 226 PFVPPPFNRELVSDESCPETPVE 248
                     + +       P+ 
Sbjct: 297 SSRYTKIRDSIKTKYDAWPEPLP 319

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 3   GIVYRDLKPENVLVRSD--GHIMLTDFDLSLKCDDS 36
             V+ DLKPEN++  +     + L DF L+   D  
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 179

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (254), Expect = 1e-26
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           R  +  GT +YL PE++ G  H   VD W+LG+  +E   G  PF    ++ T   I   
Sbjct: 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 219

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG 214
              FP    V   A+DLIS+LL  +P +R         +  HP+   
Sbjct: 220 EFTFPDF--VTEGARDLISRLLKHNPSQRP----MLREVLEHPWITA 260

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 22/35 (62%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
             +++RD+KPEN+L+ S G + + DF  S+    S
Sbjct: 125 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 159

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 4e-26
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
              +  GT  Y+APE+++ + +   VD W++G+  + L  G  PF   +       I+  
Sbjct: 165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA 224

Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
             EF       +  +AKD I  L+ KDPE+R            HP+  G   
Sbjct: 225 EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF----TCEQALQHPWIAGDTA 272

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  102 bits (254), Expect = 5e-26
 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 7/123 (5%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D        T E+ APEIV  E  G   D W +G+  + L  G++PF G D   TL N+ 
Sbjct: 182 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 241

Query: 166 ARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCT 223
               EF ++   +V   AKD I  LL K+P +RL           HP+ +G + + L   
Sbjct: 242 RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL----TVHDALEHPWLKG-DHSNLTSR 296

Query: 224 TPP 226
            P 
Sbjct: 297 IPS 299

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 2   LGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDS 36
             IV+ D+KPEN++  +     + + DF L+ K +  
Sbjct: 146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (239), Expect = 2e-24
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 102 VEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL 161
           + P   +  + VGT  ++APE+V+ + +G  VD W+LGI   E+  G  P+   +    L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225

Query: 162 ANIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
             I      E      + A  +D +++ L  D E+R      A  +  H F +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG----SAKELLQHQFLK 274

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCD 34
            +++RD+K +N+L+  DG + LTDF    +  
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 1e-23
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
            + + +GT E++APE+     +   VD +  G+ + E+     P+    +   +   V  
Sbjct: 169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 227

Query: 168 ALEFPKEPA-VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            ++            K++I   + ++ + R         + +H FFQ
Sbjct: 228 GVKPASFDKVAIPEVKEIIEGCIRQNKDERY----SIKDLLNHAFFQ 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 3   GIVYRDLKPENVLVRS-DGHIMLTDFDLSLKCDDSASNAQI 42
            I++RDLK +N+ +    G + + D  L+     S + A I
Sbjct: 134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI 174

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 94.0 bits (233), Expect = 2e-23
 Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 12/116 (10%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGE------GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
             +     GT  YLAPEI+         G+G  VD W+ G+ ++ L  G  PF      L
Sbjct: 163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 222

Query: 160 TLANIVARALEF--PKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            L  I++   +F  P+      T KDL+S+ L   P++R      A     HPFFQ
Sbjct: 223 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQII-SDQNPPIAVLQNEYLVD 60
           L IV+RDLKPEN+L+  D +I LTDF  S + D      ++  +       +++     +
Sbjct: 129 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDN 188

Query: 61  HPPFTSASCI 70
           HP +     +
Sbjct: 189 HPGYGKEVDM 198

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.6 bits (232), Expect = 3e-23
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
                    EY APE+   +   +  D W+LG  ++ L  G+ PF    ++  + NI+  
Sbjct: 159 NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNA 218

Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
              F +E    +   A D + +LL K+ + R+     AS    HP+ +
Sbjct: 219 EYTFDEEAFKEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 4e-22
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 108 RSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGV-DHELTLANIV 165
                 GT  Y+APE++     H  PVD W+ GI L  +  G  P+    D     ++  
Sbjct: 161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
            +         + +    L+ ++L ++P  R+        IK   ++ 
Sbjct: 221 EKKTYLNPWKKIDSAPLALLHKILVENPSARI----TIPDIKKDRWYN 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 12/38 (31%), Positives = 23/38 (60%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
           +GI +RD+KPEN+L+    ++ ++DF L+     +   
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.7 bits (222), Expect = 9e-22
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHG---SPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
            + SFVGT  ++APE++     G     VD W+LGI   EL     P   ++    L +I
Sbjct: 167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
                   +        ++ +   L K P+ R      +  +  H F  
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP----TSEVLLKHRFVL 271

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            +++RD+K  N+L+   G + L DF  +     +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 2e-21
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           D     F GT  Y  PE +     HG     W+LGI L+++  G  PF   +       I
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI 216

Query: 165 VARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV 215
           +   + F +   V +  + LI   LA  P  R         I++HP+ Q V
Sbjct: 217 IRGQVFFRQR--VSSECQHLIRWCLALRPSDRP----TFEEIQNHPWMQDV 261

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 3   GIVYRDLKPENVLV-RSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDH 61
           G+++RD+K EN+L+  + G + L DF       D+       +    P   ++       
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 189

Query: 62  P 62
            
Sbjct: 190 S 190

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.3 bits (218), Expect = 2e-21
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
           ++ + +GT +YL+PE   G+   +  D ++LG  L+E+  G  PF G          V  
Sbjct: 170 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 229

Query: 168 ALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKH 208
               P      + A    ++ + LAK+PE R  +   A+ ++ 
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMRA 269

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 13/60 (21%), Positives = 27/60 (45%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI++RD+KP N+++ +   + + DF ++    DS ++    +        L  E      
Sbjct: 131 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 190

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 2e-21
 Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 17/140 (12%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
              +   T  Y+APE++  E +    D W+LG+ ++ L  G  PF           +  R
Sbjct: 169 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 228

Query: 168 ALE------FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
                     P+   V    K LI  LL  +P +R+      +   +HP+         +
Sbjct: 229 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWIM-------Q 277

Query: 222 CTTPPFVPPPFNRELVSDES 241
            T  P  P   +R L  D+ 
Sbjct: 278 STKVPQTPLHTSRVLKEDKE 297

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 1e-20
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 10/120 (8%)

Query: 108 RSMSFVGTHEYLAPEIV-----SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA 162
           R  SF+GT  ++APE+V         +    D W+LGI L E+     P   ++    L 
Sbjct: 166 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 225

Query: 163 NIV-ARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR 221
            I  +      +     +  KD + + L K+ + R       S +  HPF    +   +R
Sbjct: 226 KIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARW----TTSQLLQHPFVTVDSNKPIR 281

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNA 40
            I++RDLK  N+L   DG I L DF +S K   +    
Sbjct: 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 167

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 5e-20
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 5/111 (4%)

Query: 101 VVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT 160
           ++      + +FVGT  Y++PE ++   +    D W+LG  L+EL   + PF     +  
Sbjct: 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 222

Query: 161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
              I                  ++I+++L      R         I  +P 
Sbjct: 223 AGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHRP----SVEEILENPL 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
            +++RDLKP NV +    ++ L DF L+   +   S A+
Sbjct: 134 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 172

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 8e-20
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVAR 167
                   ++ APE ++     S  D W+ G+ ++E F YG  P+RG+     +  ++ +
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-EVTAMLEK 225

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
                     P    DL++     D E R            + ++  VN 
Sbjct: 226 GERMGCPAGCPREMYDLMNLCWTYDVENRP-GFAAVELRLRNYYYDVVNE 274

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 13/67 (19%), Positives = 27/67 (40%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
               V+RDL   NVL+ +  +  ++DF LS       +  +  +    P+     E +  
Sbjct: 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184

Query: 61  HPPFTSA 67
           +   + +
Sbjct: 185 YKFSSKS 191

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 2e-19
 Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 29/133 (21%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARAL 169
            S V T  Y APE++    + +PVD W++G    E+F     FRG      L  I+    
Sbjct: 173 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 232

Query: 170 EFPKE-------------------------PAVPATAKDLISQLLAKDPERRLGSTKGAS 204
              +E                           +    KDL+ + L  +P +R+     A 
Sbjct: 233 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI----SAY 288

Query: 205 AIKHHPFFQGVNW 217
           +   HP+FQ +  
Sbjct: 289 SALSHPYFQDLER 301

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-19
 Identities = 26/154 (16%), Positives = 45/154 (29%), Gaps = 46/154 (29%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIV 165
           D  + SFVGT  Y++PE + G  +    D W++G+ L E+  G  P    D +       
Sbjct: 157 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216

Query: 166 ARALEFPKEP------------------------------------------AVPATAKD 183
            +      E                                                 +D
Sbjct: 217 CQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD 276

Query: 184 LISQLLAKDPERRLGSTKGASAIKHHPFFQGVNW 217
            +++ L K+P  R         +  H F +  + 
Sbjct: 277 FVNKCLIKNPAERA----DLKQLMVHAFIKRSDA 306

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 5e-18
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 1/91 (1%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV 165
           V          + APE +         D W  G+ L+E+F YG  P+ G++    L  I 
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 228

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
                 P+    P    +++ Q  A  PE R
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
             ++RDL   N+L+ +   + + DF L      +  +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 3e-17
 Identities = 37/165 (22%), Positives = 53/165 (32%), Gaps = 35/165 (21%)

Query: 108 RSMSFVGTHEYLAP-EIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
            ++S++ +  Y AP  I     + S +D W+ G  L EL  G   F G      L  I+ 
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237

Query: 167 RALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGS 199
                 +E                           P  P  A  L S+LL   P  RL  
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-- 295

Query: 200 TKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFN---RELVSDES 241
                    H FF  +    ++       P  FN   +EL S+  
Sbjct: 296 --TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPP 338

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (188), Expect = 4e-17
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHG---SPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
           +     G+  ++APE++  +         D +  GI L+EL  G  P+  +++   +  +
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

Query: 165 VARALEFPK----EPAVPATAKDLISQLLAKDPERR 196
           V R    P         P   K L+++ L K  + R
Sbjct: 222 VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 6e-17
 Identities = 31/143 (21%), Positives = 40/143 (27%), Gaps = 31/143 (21%)

Query: 110 MSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
              V T  Y APE++ G   +G  VD W +G  L EL   V    G      L  I    
Sbjct: 158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 217

Query: 169 LEFPKE--------------------------PAVPATAKDLISQLLAKDPERRLGSTKG 202
               +E                           A      DLI  L   +P  R+     
Sbjct: 218 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARI----T 273

Query: 203 ASAIKHHPFFQGVNWALLRCTTP 225
           A+      +F         C  P
Sbjct: 274 ATQALKMKYFSNRPGPTPGCQLP 296

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 2e-16
 Identities = 35/135 (25%), Positives = 46/135 (34%), Gaps = 32/135 (23%)

Query: 110 MSFVGTHEYLAPEIVSGEGHGSP-VDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
              V T  Y APEI+ G  + S  VD W+LG    E+      F G      L  I    
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219

Query: 169 LEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTK 201
               +                            P +    + L+SQ+L  DP +R+    
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI---- 275

Query: 202 GASAIKHHPFFQGVN 216
            A A   HPFFQ V 
Sbjct: 276 SAKAALAHPFFQDVT 290

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 5e-16
 Identities = 24/112 (21%), Positives = 36/112 (32%), Gaps = 1/112 (0%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
            + +             ++ APE           D W+ GI L EL              
Sbjct: 162 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 221

Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF 211
            + + V R    P  P  P +  DL+ Q   K+PE R  + +   A     F
Sbjct: 222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDYF 272

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
            +  V+RDL+  N+LV  +    + DF L+   +D+   A+
Sbjct: 131 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 171

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.2 bits (179), Expect = 5e-16
 Identities = 16/99 (16%), Positives = 35/99 (35%)

Query: 98  PEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH 157
             FV++     S       ++ +PE+ S   + S  D W+ G+ ++E+F           
Sbjct: 148 TRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 207

Query: 158 ELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
              +   ++      K          +++    + PE R
Sbjct: 208 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDR 246

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
            +++RDL   N LV  +  I ++DF ++    D 
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.8 bits (180), Expect = 6e-16
 Identities = 38/166 (22%), Positives = 57/166 (34%), Gaps = 34/166 (20%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN 163
            D     +V T  Y APEI+    H    VD W++G  + EL  G T F G DH   L  
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230

Query: 164 IVARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPE 194
           I+        E                                   A DL+ ++L  D +
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290

Query: 195 RRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
           +R+     A+    H +F   +         P+     +R+L+ DE
Sbjct: 291 KRI----TAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDE 332

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 8e-16
 Identities = 30/135 (22%), Positives = 45/135 (33%), Gaps = 35/135 (25%)

Query: 110 MSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
            + V T  Y  PE++ GE  +G P+D W  G  + E++      +G   +  LA I    
Sbjct: 179 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238

Query: 169 LEFPKE------------------------------PAVPATAKDLISQLLAKDPERRLG 198
                E                                    A DLI +LL  DP +R+ 
Sbjct: 239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI- 297

Query: 199 STKGASAIKHHPFFQ 213
               +    +H FF 
Sbjct: 298 ---DSDDALNHDFFW 309

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 9e-16
 Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 34/166 (20%)

Query: 105 VDVRSMSFVGTHEYLAPE-IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN 163
            D     +V T  Y APE I++   +   VD W++G  + E+  G T F+G DH   L  
Sbjct: 171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 230

Query: 164 IVARALEFPKE-----------------------------PAVPATAKDLISQLLAKDPE 194
           I+      P E                                   A +L+ ++L  D E
Sbjct: 231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE 290

Query: 195 RRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDE 240
           +R+     A     HP+F+ ++          +     + +   DE
Sbjct: 291 QRV----TAGEALAHPYFESLHDTEDEPQVQKYDDSFDDVDRTLDE 332

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 2/98 (2%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHE 158
           +V++     S+       +  PE++      S  D W  G+ ++E++  G  P+    + 
Sbjct: 149 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 208

Query: 159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
            T  +I  + L   +          ++     +  + R
Sbjct: 209 ETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADER 245

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLS 30
               ++RDL   N LV   G + ++DF LS
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 14/93 (15%), Positives = 35/93 (37%), Gaps = 2/93 (2%)

Query: 105 VDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLAN 163
                 +     ++ APE +  +   +  D W+ GI L+E++ +G  P+  +  +  +  
Sbjct: 153 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 212

Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
           +  +  +       P    +++      D   R
Sbjct: 213 VE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 244

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEY 57
             V+RDL   NVLV  D    ++DF L+ +   +    ++      P A+ + ++
Sbjct: 123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF 177

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 3e-15
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV 165
           V   +     +++APE +    +    D W+ GI L+E+F  GV P+ G+  +     ++
Sbjct: 221 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 280

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
               +  +          ++    A D  +R
Sbjct: 281 QNGFKMDQPFYATEEIYIIMQSCWAFDSRKR 311

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
             V+RDL   NVLV     + + DF L+ +   S SN  +  +   P+  +  E L +  
Sbjct: 184 SCVHRDLAARNVLVTHGKVVKICDFGLA-RDIMSDSNYVVRGNARLPVKWMAPESLFEG- 241

Query: 63  PFTSASCIIPNCIV 76
            +T  S +    I+
Sbjct: 242 IYTIKSDVWSYGIL 255

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 5e-15
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 5/142 (3%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVA 166
            +       +++A E +    +    D W+ G+ ++EL  +G  P+ G+     +++I+ 
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSILE 227

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGST---KGASAIKHHPFFQGVNWALLRCT 223
           +    P+ P        ++ +    D + R          S +   P    V     R  
Sbjct: 228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 287

Query: 224 TPPFVPPPFNRELVSDESCPET 245
            P      F R L+ +E   + 
Sbjct: 288 LPSPTDSNFYRALMDEEDMDDV 309

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 9e-06
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
              +V+RDL   NVLV++  H+ +TDF L+               + P    +  E +  
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMALESI-L 186

Query: 61  HPPFTSASCI 70
           H  +T  S +
Sbjct: 187 HRIYTHQSDV 196

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.6 bits (172), Expect = 5e-15
 Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 8/117 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
            + +  GT  Y +     G       D  +LG  L     G  P++G+            
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228

Query: 168 ALEFPKEPA------VPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF-QGVNW 217
           + +    P        P+     ++   +   + +         +  + F  QG ++
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKP-DYSYLRQLFRNLFHRQGFSY 284

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.9 bits (170), Expect = 8e-15
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 32/136 (23%)

Query: 106 DVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANI 164
             +    + T  Y AP+++ G   + + +D W++G    E+  G   F GV     L  I
Sbjct: 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213

Query: 165 VARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRL 197
                    +                             +  +  DL+S++L  DP +R+
Sbjct: 214 FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273

Query: 198 GSTKGASAIKHHPFFQ 213
                A     H +F+
Sbjct: 274 ----TAKQALEHAYFK 285

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 8e-15
 Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 38/165 (23%)

Query: 110 MSFVGTHEYLAPEIV-SGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
             +V T  Y APEI+ + +G+   +D W++G  L E+      F G  +   L +I+   
Sbjct: 170 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 229

Query: 169 LEFPKE-----------------------------PAVPATAKDLISQLLAKDPERRLGS 199
               +E                             P   + A DL+ ++L  +P +R+  
Sbjct: 230 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI-- 287

Query: 200 TKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESCPE 244
                    HP+ +         +  P    PF  ++  D+   E
Sbjct: 288 --EVEQALAHPYLEQ----YYDPSDEPIAEAPFKFDMELDDLPKE 326

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 1e-14
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 3/112 (2%)

Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTL 161
           +       +     ++ APE ++     S  D W+ G+ ++E   YG  P++ +     +
Sbjct: 163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM 222

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ 213
           A I  +       P  P     L+S       E R         ++   ++ 
Sbjct: 223 AFIE-QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR-ACYYS 272

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 15/67 (22%), Positives = 25/67 (37%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVD 60
               V+RDL   NVL+ +  +  ++DF LS       S     S    P+     E +  
Sbjct: 127 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 186

Query: 61  HPPFTSA 67
               + +
Sbjct: 187 RKFSSRS 193

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 91  KTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGV 149
           K G      ++ +    ++       +++APE ++     S  D W  G+ ++E+  +GV
Sbjct: 148 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207

Query: 150 TPFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
            PF+GV +   +  I       P  P  P T   L+++  A DP RR
Sbjct: 208 KPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS 36
             V+RD+   NVLV S+  + L DF LS   +DS
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 1e-14
 Identities = 12/89 (13%), Positives = 30/89 (33%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
                    +++A E +  +   +  D W+ G+ L+EL     P     +   +   + +
Sbjct: 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 249

Query: 168 ALEFPKEPAVPATAKDLISQLLAKDPERR 196
                +    P    +++ +      E R
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMR 278

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 1/68 (1%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNP-PIAVLQNEYLV 59
               V+RDL   N ++     + + DF L+    D   ++         P+  +  E L 
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 207

Query: 60  DHPPFTSA 67
                T +
Sbjct: 208 TQKFTTKS 215

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 25/147 (17%), Positives = 42/147 (28%), Gaps = 41/147 (27%)

Query: 108 RSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA 166
                V +  +  PE++   + +   +D W+LG  L  + +   PF            +A
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244

Query: 167 RALEFP------------------------------------KEPAVPATAKDLISQLLA 190
           + L                                        +  V   A D + +LL 
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304

Query: 191 KDPERRLGSTKGASAIKHHPFFQGVNW 217
            D + RL     A     HP+F  V  
Sbjct: 305 YDHQSRL----TAREAMEHPYFYTVVK 327

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 16/88 (18%), Positives = 29/88 (32%)

Query: 109 SMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARA 168
           +        + APE +S     S  D W+ GI ++E+               +   +   
Sbjct: 170 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 229

Query: 169 LEFPKEPAVPATAKDLISQLLAKDPERR 196
              P     P+    L+ Q   ++  RR
Sbjct: 230 FRLPTPMDCPSAIYQLMMQCWQQERARR 257

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 17/65 (26%), Positives = 27/65 (41%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
             V+RDL   N+LV S+    ++DF LS   +D        S    PI     E +    
Sbjct: 130 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 189

Query: 63  PFTSA 67
             +++
Sbjct: 190 FTSAS 194

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 6e-14
 Identities = 16/93 (17%), Positives = 31/93 (33%)

Query: 104 PVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLAN 163
            V V+         ++A E ++   + +  D W+ G+ L+E+               L  
Sbjct: 178 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 237

Query: 164 IVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
            + +     K         DL+ Q   + P  R
Sbjct: 238 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYER 270

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSAS 38
              ++RDL   N+LV  +    + DF LS   +    
Sbjct: 146 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 182

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 7e-14
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 2/90 (2%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVA 166
           ++ +     +++APE +    +    D W+ G+ L+E+F  G +P+ GV  E  L  ++ 
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-ELFKLLK 251

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERR 196
                 K          ++       P +R
Sbjct: 252 EGHRMDKPSNCTNELYMMMRDCWHAVPSQR 281

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.1 bits (163), Expect = 1e-13
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 11/139 (7%)

Query: 59  VDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEY 118
             H    + + ++ + +V  VS F   R  +  T   +            ++       +
Sbjct: 149 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY---------TSALGGKIPIRW 199

Query: 119 LAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVARALEFPKEPAV 177
            APE +      S  D W+ GI ++E+  YG  P+  + ++  + N + +    P     
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMDC 258

Query: 178 PATAKDLISQLLAKDPERR 196
           P+    L+     KD   R
Sbjct: 259 PSALHQLMLDCWQKDRNHR 277

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 1   MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
            +  V+RDL   N+LV S+    ++DF LS   +D  S+
Sbjct: 146 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 2e-13
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 33/131 (25%)

Query: 112 FVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTP-FRGVDHELTLANIVARAL 169
            V T  Y  P+++ G   + + +D W+ G    EL     P F G D +  L  I     
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220

Query: 170 EFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKG 202
              +E                           P + AT +DL+  LL  +P +R+     
Sbjct: 221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI----S 276

Query: 203 ASAIKHHPFFQ 213
           A     HP+F 
Sbjct: 277 AEEALQHPYFS 287

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.0 bits (160), Expect = 2e-13
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV- 165
              +      ++ PE +    + +  D W  G+ L+E+F YG+ P+ G+ HE  +  +  
Sbjct: 198 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD 257

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
              L  P+    P    +L+    +K P  R
Sbjct: 258 GNILACPEN--CPLELYNLMRLCWSKLPADR 286

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 3e-13
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIVA 166
           +    +    +++PE +      +  D W+ G+ L+E+      P++G+ +E  L  ++ 
Sbjct: 191 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 250

Query: 167 RALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH--HPFFQGVN 216
             L   K    P    +L+      +P+ R    +  S+IK    P F+ V+
Sbjct: 251 GGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 301

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-13
 Identities = 15/97 (15%), Positives = 28/97 (28%)

Query: 100 FVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL 159
            + +             ++ APE ++        D W+ GI L E+              
Sbjct: 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217

Query: 160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
            +   + R     +    P     L+     + PE R
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 3e-05
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQ 41
             ++RDL+  N+LV       + DF L+   +D+   A+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 65.6 bits (159), Expect = 3e-13
 Identities = 12/95 (12%), Positives = 21/95 (22%), Gaps = 6/95 (6%)

Query: 108 RSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVAR 167
              +  GT  Y++     G       D   LG        G  P++G+            
Sbjct: 169 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 228

Query: 168 ALEFPKEPA------VPATAKDLISQLLAKDPERR 196
             +    P        P      +        +  
Sbjct: 229 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDAT 263

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 3   GIVYRDLKPENVLVRS-----DGHIMLTDFDLSLKCDDSASNAQIISDQ 46
            +VYRD+KP+N L+          I + DF +     D  +   I   +
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 169

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 2e-12
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 47/165 (28%)

Query: 112 FVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVA----- 166
           +V T  Y APE++ G G+   VD W++G  + E+      F G D+      ++      
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Query: 167 ----------------------RALEFPK-------------EPAVPATAKDLISQLLAK 191
                                   L FPK                  + A+DL+S++L  
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297

Query: 192 DPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNREL 236
           DP +R+           HP+   V +       PP  P  ++++L
Sbjct: 298 DPAKRI----SVDDALQHPYIN-VWYDPAEVEAPP--PQIYDKQL 335

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 6e-12
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 107 VRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELF-YGVTPFRGVDHELTLANIV 165
           V   +     +++APE +    +    D W+ GIFL+ELF  G +P+ G+  +     ++
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261

Query: 166 ARALEFPKEPAVPATAKDLISQLLAKDPERR 196
                       PA   D++      DP +R
Sbjct: 262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKR 292

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 8e-05
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASN 39
             ++RDL   N+L+       + DF L+    + ++ 
Sbjct: 165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.6 bits (148), Expect = 1e-11
 Identities = 32/242 (13%), Positives = 61/242 (25%), Gaps = 31/242 (12%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
           GI++ D+KPENVL+                  ++    +  ++          E L+  P
Sbjct: 146 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAP 205

Query: 63  PFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPE 122
               A      C++  +                          +          +    +
Sbjct: 206 WGCGADIWSTACLIFELITGDF-------------------LFEPDEGHSYTKDDDHIAQ 246

Query: 123 IVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLANIVARALEFPKEPAVPATAK 182
           I+   G   P      G +    F      R +              ++           
Sbjct: 247 IIELLGE-LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 305

Query: 183 DLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLRCTTPPFVPPPFNRELVSDESC 242
           D +S +L  DP +R      A  + +HP+ +              +  P      S    
Sbjct: 306 DFLSPMLQLDPRKRA----DAGGLVNHPWLKDTLG-------MEEIRVPDRELYGSGSDI 354

Query: 243 PE 244
           P 
Sbjct: 355 PG 356

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 1e-11
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 103 EPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV-TPFRGVDHELTL 161
           +P  VR        +++APE +    +    D W+ G+ L+E+F    +P+ GV  +   
Sbjct: 187 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246

Query: 162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
              +                   +      +P +R
Sbjct: 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 281

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 1e-05
 Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 1/82 (1%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
             ++RDL   N+L+     + + DF L+          +    + P    +  E + D  
Sbjct: 154 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL-KWMAPETIFDRV 212

Query: 63  PFTSASCIIPNCIVPAVSCFRP 84
               +       ++  +     
Sbjct: 213 YTIQSDVWSFGVLLWEIFSLGA 234

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 13/106 (12%), Positives = 29/106 (27%)

Query: 91  KTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVT 150
           K         +               ++ APE ++        D W  G+ L+E+     
Sbjct: 155 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214

Query: 151 PFRGVDHELTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERR 196
                     +  ++ +     +    P    +L+      +P  R
Sbjct: 215 SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDR 260

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 3   GIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHP 62
             ++RDL   N LV  +  + + DF LS         A   +              + + 
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA---PESLAYN 191

Query: 63  PFTSASCIIPNCIV 76
            F+  S +    ++
Sbjct: 192 KFSIKSDVWAFGVL 205

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 9e-08
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 6/128 (4%)

Query: 2   LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDS------ASNAQIISDQNPPIAVLQN 55
             I +RDLK +N+LV+ +G   + D  L+++ D +      A N ++ + +     VL +
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD 186

Query: 56  EYLVDHPPFTSASCIIPNCIVPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGT 115
              + H      + I    +V      R       +  Q    + V     V  M  V  
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246

Query: 116 HEYLAPEI 123
            + L P I
Sbjct: 247 EQKLRPNI 254

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 9e-08
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 26/131 (19%)

Query: 93  GQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH------GSPVDWWTLGIFLFELF 146
           G     +   + +D+     VGT  Y+APE++    +          D + +G+  +E+ 
Sbjct: 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212

Query: 147 YGVTPFRG-----------VDHELTLANIVARALEFPKEPAVPAT---------AKDLIS 186
              +               V  + ++  +     E    P +P              ++ 
Sbjct: 213 RRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272

Query: 187 QLLAKDPERRL 197
           +    +   RL
Sbjct: 273 ECWYANGAARL 283

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.98
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.98
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.98
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.98
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.75
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.95
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	92.48
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	88.77
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	87.98

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-40  Score=274.47  Aligned_cols=159  Identities=36%  Similarity=0.687  Sum_probs=133.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       127 ~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~------------------------------------------  164 (288)
T d1uu3a_         127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------------------------------------------  164 (288)
T ss_dssp             TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----------------------------------------------
T ss_pred             ccEEcCcCCccccccCCCceEEecccccceecccCCcc------------------------------------------
Confidence            69999999999999999999999999998664432111                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                               ......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+..
T Consensus       165 -------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~  219 (288)
T d1uu3a_         165 -------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIF  219 (288)
T ss_dssp             ------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------------------------cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHH
Confidence                                     0111347999999999999999999999999999999999999999999888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccC--hHHHhcCCCCCCCCccccccCCCCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKG--ASAIKHHPFFQGVNWALLRCTTPPFVP  229 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~--a~~ll~hp~~~~~~~~~~~~~~~~~~~  229 (250)
                      .++......+|  ..+++++.+||.+||+.||++|||+.+.  ...+++||||++++|..+...+||.+|
T Consensus       220 ~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~~~~pP~l~  287 (288)
T d1uu3a_         220 QKIIKLEYDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT  287 (288)
T ss_dssp             HHHHTTCCCCC--TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCCC
T ss_pred             HHHHcCCCCCC--ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhhcCCCCCCC
Confidence            88887766554  4799999999999999999999995442  234799999999999999998888776

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-39  Score=275.52  Aligned_cols=164  Identities=34%  Similarity=0.653  Sum_probs=138.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.....                                            
T Consensus       159 ~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--------------------------------------------  194 (350)
T d1rdqe_         159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--------------------------------------------  194 (350)
T ss_dssp             HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------
T ss_pred             hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--------------------------------------------
Confidence            369999999999999999999999999998654321                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       195 ----------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         195 ----------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             ----------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----------------------------cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence                                        1124799999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccC-CCccChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRL-GSTKGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRELV  237 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~-t~~~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~  237 (250)
                      +.++......++  ..+++++.+||.+||++||++|+ +..+.+++++.||||++++|..+  .+..+|++|........
T Consensus       247 ~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~d~  324 (350)
T d1rdqe_         247 YEKIVSGKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDT  324 (350)
T ss_dssp             HHHHHHCCCCCC--TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCC
T ss_pred             HHHHhcCCCCCC--ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCcchh
Confidence            888887765554  47999999999999999999995 22234999999999999999876  44678999887665444


Q ss_pred             C
Q 025601          238 S  238 (250)
Q Consensus       238 ~  238 (250)
                      +
T Consensus       325 s  325 (350)
T d1rdqe_         325 S  325 (350)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-39  Score=272.80  Aligned_cols=162  Identities=38%  Similarity=0.738  Sum_probs=138.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       123 ~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~------------------------------------------  160 (337)
T d1o6la_         123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA------------------------------------------  160 (337)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC------------------------------------------
T ss_pred             hcCccccccCHHHeEecCCCCEEEeecccccccccCCc------------------------------------------
Confidence            36999999999999999999999999999865432211                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....++||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+..+.
T Consensus       161 ---------------------------~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~  213 (337)
T d1o6la_         161 ---------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  213 (337)
T ss_dssp             ---------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------------------------ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH
Confidence                                       11135799999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc-ChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK-GASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~-~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      ...+......+|  ..+++++++||.+||++||++|+++.. .++++++||||++++|..+  ++..||+.|....
T Consensus       214 ~~~i~~~~~~~p--~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~  287 (337)
T d1o6la_         214 FELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTS  287 (337)
T ss_dssp             HHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSS
T ss_pred             HHHHhcCCCCCC--ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCC
Confidence            888887766654  479999999999999999999997543 4899999999999999877  4567888876644

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.2e-39  Score=269.45  Aligned_cols=159  Identities=39%  Similarity=0.794  Sum_probs=135.7

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.....                                            
T Consensus       122 ~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--------------------------------------------  157 (316)
T d1fota_         122 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--------------------------------------------  157 (316)
T ss_dssp             TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------
T ss_pred             cCcEEccccCchheeEcCCCCEEEecCccceEeccc--------------------------------------------
Confidence            479999999999999999999999999998553221                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  ..+.+||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..+.
T Consensus       158 ----------------------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         158 ----------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             ----------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------------------------cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence                                        1124799999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      ..++......+|  ..+++++.++|.+||++||++|++.. ..++++|+||||++++|..+  +...+|+.|+...
T Consensus       210 ~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~  283 (316)
T d1fota_         210 YEKILNAELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQ  283 (316)
T ss_dssp             HHHHHHCCCCCC--TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC--
T ss_pred             HHHHHcCCCCCC--CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCC
Confidence            888887765554  47899999999999999999997322 24999999999999999977  4677888887533

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.3e-38  Score=271.78  Aligned_cols=166  Identities=32%  Similarity=0.634  Sum_probs=128.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|.+||+|||+++......                                            
T Consensus       126 ~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~--------------------------------------------  161 (364)
T d1omwa3         126 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------------------------------------------  161 (364)
T ss_dssp             TTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC--------------------------------------------
T ss_pred             CCccceeeccceeEEcCCCcEEEeeeceeeecCCCc--------------------------------------------
Confidence            699999999999999999999999999985433211                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+......
T Consensus       162 ---------------------------~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  214 (364)
T d1omwa3         162 ---------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK  214 (364)
T ss_dssp             ---------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH
T ss_pred             ---------------------------ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                                       112369999999999975 5689999999999999999999999987653322


Q ss_pred             HHHHHH--hccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCcC
Q 025601          161 LANIVA--RALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNRE  235 (250)
Q Consensus       161 ~~~i~~--~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~~  235 (250)
                      .. +..  .......+..+++++.+||.+||++||++|||+. ..|+++++||||++++|..+  ....||++|+.....
T Consensus       215 ~~-~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~  293 (364)
T d1omwa3         215 HE-IDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVN  293 (364)
T ss_dssp             HH-HHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC---
T ss_pred             HH-HHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCCCC
Confidence            21 222  2223344557999999999999999999999953 45899999999999999866  557789999876655


Q ss_pred             CCCC
Q 025601          236 LVSD  239 (250)
Q Consensus       236 ~~~~  239 (250)
                      ..+.
T Consensus       294 ~~~~  297 (364)
T d1omwa3         294 AADA  297 (364)
T ss_dssp             ----
T ss_pred             cCCc
Confidence            4443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=261.97  Aligned_cols=158  Identities=39%  Similarity=0.783  Sum_probs=128.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.......                                          
T Consensus       121 ~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~------------------------------------------  158 (320)
T d1xjda_         121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA------------------------------------------  158 (320)
T ss_dssp             HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC------------------------------------------
T ss_pred             hCCeeeccCcccceeecCCCceeccccchhhhcccccc------------------------------------------
Confidence            36999999999999999999999999999865332110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+..+.
T Consensus       159 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~  211 (320)
T d1xjda_         159 ---------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL  211 (320)
T ss_dssp             ---------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---------------------------cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH
Confidence                                       01124689999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChH-HHhcCCCCCCCCcccc--ccCCCCCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGAS-AIKHHPFFQGVNWALL--RCTTPPFVPPPFN  233 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~-~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~  233 (250)
                      ..++......+|  ..++.++.+||.+||++||++||+    +. ++++||||++++|..+  ..+.||+.|....
T Consensus       212 ~~~i~~~~~~~p--~~~s~~~~dli~~~L~~dP~~R~s----~~~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~  281 (320)
T d1xjda_         212 FHSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKS  281 (320)
T ss_dssp             HHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC--------
T ss_pred             HHHHHcCCCCCC--ccCCHHHHHHHHHhcccCCCCCcC----HHHHHHhCchhccCCHHHHHhcCCCCCCCCCCCC
Confidence            888877655444  478999999999999999999999    74 7999999999999876  4567788876544

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-37  Score=251.85  Aligned_cols=137  Identities=34%  Similarity=0.633  Sum_probs=119.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++......                                           
T Consensus       124 ~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~-------------------------------------------  160 (263)
T d2j4za1         124 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------------------------------------------  160 (263)
T ss_dssp             HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC-------------------------------------------
T ss_pred             HCCeeeeeeccccceecCCCCEeecccceeeecCCCc-------------------------------------------
Confidence            3699999999999999999999999999985433211                                           


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       161 ----------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  212 (263)
T d2j4za1         161 ----------------------------RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET  212 (263)
T ss_dssp             ----------------------------CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ----------------------------ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH
Confidence                                        0123699999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.++......+|  ..+++++.+||.+||+.||++|||    ++++|+||||.+
T Consensus       213 ~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dp~~R~t----~~eil~hp~~~~  260 (263)
T d2j4za1         213 YKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITA  260 (263)
T ss_dssp             HHHHHTTCCCCC--TTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTCHHHHH
T ss_pred             HHHHHcCCCCCC--ccCCHHHHHHHHHHccCCHhHCcC----HHHHHcCcCcCC
Confidence            888777665544  468999999999999999999999    999999999964

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-36  Score=252.34  Aligned_cols=141  Identities=29%  Similarity=0.502  Sum_probs=120.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+||+|||+++.......                                          
T Consensus       134 ~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~------------------------------------------  171 (293)
T d1yhwa1         134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------  171 (293)
T ss_dssp             HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC------------------------------------------
T ss_pred             HCCCcccCCcHHHeEECCCCcEeeccchhheeeccccc------------------------------------------
Confidence            36999999999999999999999999999865432110                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus       172 ---------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  224 (293)
T d1yhwa1         172 ---------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (293)
T ss_dssp             ---------------------------CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             ---------------------------cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH
Confidence                                       11134799999999999999899999999999999999999999999888877


Q ss_pred             HHHHHHhcc-CCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARAL-EFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~-~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +..+..... ..+.+..++.++++||.+||+.||++|||    ++++|+||||+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~Hp~~~~  275 (293)
T d1yhwa1         225 LYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS----AKELLQHQFLKI  275 (293)
T ss_dssp             HHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHTTCGGGGG
T ss_pred             HHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhCC
Confidence            777766543 34445678999999999999999999999    999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-36  Score=247.79  Aligned_cols=137  Identities=25%  Similarity=0.413  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       133 ~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-------------------------------------------  169 (269)
T d2java1         133 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-------------------------------------------  169 (269)
T ss_dssp             -------CCGGGEEECTTSCEEECCHHHHHHC------------------------------------------------
T ss_pred             CCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCC-------------------------------------------
Confidence            3599999999999999999999999999865432110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+..
T Consensus       170 --------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~  223 (269)
T d2java1         170 --------------------------FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA  223 (269)
T ss_dssp             --------------------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --------------------------ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHH
Confidence                                      011246899999999999999999999999999999999999999998888888


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .++...... +.+..+++++.+||.+||+.||++|||    ++++|+|||+
T Consensus       224 ~~i~~~~~~-~~~~~~s~~l~~li~~~L~~dp~~Rps----~~ell~hp~i  269 (269)
T d2java1         224 GKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLI  269 (269)
T ss_dssp             HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTC
T ss_pred             HHHHcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcC----HHHHHhCCcC
Confidence            777766543 344579999999999999999999999    9999999996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=248.59  Aligned_cols=142  Identities=32%  Similarity=0.459  Sum_probs=119.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++......                                            
T Consensus       135 ~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~--------------------------------------------  170 (305)
T d1blxa_         135 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------  170 (305)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG--------------------------------------------
T ss_pred             CCEEecCCCccEEEEcCCCCeeecchhhhhhhcccc--------------------------------------------
Confidence            699999999999999999999999999875432111                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+++
T Consensus       171 --------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~  224 (305)
T d1blxa_         171 --------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL  224 (305)
T ss_dssp             --------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --------------------------cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                      111347999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHhccCCC-------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          162 ANIVARALEFP-------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       162 ~~i~~~~~~~p-------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .+++...+...                         ....+++.+.+||.+||++||++|||    |+|+|+||||++++
T Consensus       225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s----a~e~L~Hpff~~i~  300 (305)
T d1blxa_         225 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGTTCC
T ss_pred             HHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHhcChhhcCch
Confidence            88776432211                         12356888999999999999999999    99999999999987


Q ss_pred             c
Q 025601          217 W  217 (250)
Q Consensus       217 ~  217 (250)
                      +
T Consensus       301 ~  301 (305)
T d1blxa_         301 R  301 (305)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=246.27  Aligned_cols=143  Identities=29%  Similarity=0.357  Sum_probs=118.4

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       119 ~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-------------------------------------------  155 (299)
T d1ua2a_         119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-------------------------------------------  155 (299)
T ss_dssp             TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-------------------------------------------
T ss_pred             cceecccCCcceEEecCCCccccccCccccccCCCcc-------------------------------------------
Confidence            6999999999999999999999999999855332110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                .....+||+.|+|||++.+. .++.++||||+||++|||++|..||.+.+..++
T Consensus       156 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~  209 (299)
T d1ua2a_         156 --------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ  209 (299)
T ss_dssp             --------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             --------------------------cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHH
Confidence                                      01124689999999998765 479999999999999999999999999998888


Q ss_pred             HHHHHHhccCCCCC--------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          161 LANIVARALEFPKE--------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~--------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.+|.+..+.....                          ..+++++.+||.+||+.||++|||    |+|+|+||||++
T Consensus       210 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s----a~e~L~Hp~f~~  285 (299)
T d1ua2a_         210 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYFSN  285 (299)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGGTS
T ss_pred             HHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC----HHHHhCCHhhCC
Confidence            88887653322111                          246789999999999999999999    999999999998


Q ss_pred             CCc
Q 025601          215 VNW  217 (250)
Q Consensus       215 ~~~  217 (250)
                      ...
T Consensus       286 ~p~  288 (299)
T d1ua2a_         286 RPG  288 (299)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            664

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-36  Score=247.24  Aligned_cols=143  Identities=23%  Similarity=0.418  Sum_probs=113.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++........                                         
T Consensus       121 ~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~-----------------------------------------  159 (271)
T d1nvra_         121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-----------------------------------------  159 (271)
T ss_dssp             HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE-----------------------------------------
T ss_pred             HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcc-----------------------------------------
Confidence            369999999999999999999999999998654321100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.....
T Consensus       160 --------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~  213 (271)
T d1nvra_         160 --------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  213 (271)
T ss_dssp             --------------------------CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS
T ss_pred             --------------------------ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH
Confidence                                      01113479999999999998875 678999999999999999999998765444


Q ss_pred             HHHH-HHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          160 TLAN-IVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       160 ~~~~-i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .... +.......+....+++++.+||.+||+.||++|||    ++++|+||||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~eil~hpwf~~  265 (271)
T d1nvra_         214 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNK  265 (271)
T ss_dssp             HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTC
T ss_pred             HHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCc
Confidence            3333 33333333333568999999999999999999999    999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.1e-35  Score=251.99  Aligned_cols=147  Identities=29%  Similarity=0.495  Sum_probs=125.0

Q ss_pred             CccceeecCCCCcEEeCC--CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRS--DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~--~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      ++|||||||||+|||++.  ++.+||+|||+++.......                                        
T Consensus       142 ~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~----------------------------------------  181 (350)
T d1koaa2         142 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS----------------------------------------  181 (350)
T ss_dssp             HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred             hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccc----------------------------------------
Confidence            369999999999999964  58899999999865432211                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       182 ------------------------------~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~  231 (350)
T d1koaa2         182 ------------------------------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD  231 (350)
T ss_dssp             ------------------------------EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------------------------cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH
Confidence                                          01236899999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      +.+.++......++..  ..+++++++||.+||+.||++|||    ++++|+||||...+|....
T Consensus       232 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~eil~hp~~~~~~~~~~~  292 (350)
T d1koaa2         232 ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAPGRD  292 (350)
T ss_dssp             HHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCC----HHHHHHSTTTSCTTCCSCC
T ss_pred             HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCCCCCch
Confidence            8888888776655433  468999999999999999999999    9999999999988875443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-35  Score=249.91  Aligned_cols=136  Identities=25%  Similarity=0.361  Sum_probs=119.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.....                                             
T Consensus       134 ~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~---------------------------------------------  168 (309)
T d1u5ra_         134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---------------------------------------------  168 (309)
T ss_dssp             TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---------------------------------------------
T ss_pred             CCEeccCCCcceEEECCCCCEEEeecccccccCCC---------------------------------------------
Confidence            69999999999999999999999999998543211                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG---EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ....||+.|+|||++.+   ..|+.++|||||||++|||++|..||.+....
T Consensus       169 ----------------------------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~  220 (309)
T d1u5ra_         169 ----------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  220 (309)
T ss_dssp             ----------------------------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             ----------------------------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH
Confidence                                        12369999999999975   34899999999999999999999999999888


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.+.++.....+......+++++.+||.+||+.||++|||    ++++|+||||..
T Consensus       221 ~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~Hp~~~~  272 (309)
T d1u5ra_         221 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLR  272 (309)
T ss_dssp             HHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHS
T ss_pred             HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcC----HHHHHhCHHhcC
Confidence            8888888877666666778999999999999999999999    999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-35  Score=246.79  Aligned_cols=141  Identities=35%  Similarity=0.610  Sum_probs=111.7

Q ss_pred             CccceeecCCCCcEEeC---CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVR---SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      ++|||||||||+||++.   .++.+||+|||+++......                                        
T Consensus       125 ~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~----------------------------------------  164 (307)
T d1a06a_         125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----------------------------------------  164 (307)
T ss_dssp             HTTCCCSCCCGGGEEESSSSTTCCEEECCC--------------------------------------------------
T ss_pred             hceeeeEEecccceeecccCCCceEEEeccceeEEccCCC----------------------------------------
Confidence            36999999999999995   46899999999985432211                                        


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                    .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.+...
T Consensus       165 ------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         165 ------------------------------VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             --------------------------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ------------------------------eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence                                          01124799999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          158 ELTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      .+....+......++.  ...+|+++.+||.+||++||++|||    ++++|+||||++.
T Consensus       215 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~~  270 (307)
T d1a06a_         215 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT----CEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTTSS
T ss_pred             HHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcC----HHHHhcCHhhCCC
Confidence            8888888877655433  3578999999999999999999999    9999999999863

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-36  Score=253.61  Aligned_cols=143  Identities=30%  Similarity=0.426  Sum_probs=110.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.+|.+||+|||+++.....                                             
T Consensus       124 ~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~---------------------------------------------  158 (322)
T d1s9ja_         124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------  158 (322)
T ss_dssp             HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---------------------------------------------
T ss_pred             CCEEccccCHHHeeECCCCCEEEeeCCCccccCCC---------------------------------------------
Confidence            48999999999999999999999999998532100                                             


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ...+++||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+.....
T Consensus       159 --------------------------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~  212 (322)
T d1s9ja_         159 --------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELE  212 (322)
T ss_dssp             --------------------------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHH
T ss_pred             --------------------------ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                                      011357999999999999999999999999999999999999999876532211


Q ss_pred             H------------------------------------------HHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCC
Q 025601          162 A------------------------------------------NIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGS  199 (250)
Q Consensus       162 ~------------------------------------------~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~  199 (250)
                      .                                          .+.....+......++.++.+||.+||+.||++||| 
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t-  291 (322)
T d1s9ja_         213 LMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD-  291 (322)
T ss_dssp             HHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCC-
T ss_pred             HHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcC-
Confidence            0                                          011110011111236789999999999999999999 


Q ss_pred             ccChHHHhcCCCCCCCCccc
Q 025601          200 TKGASAIKHHPFFQGVNWAL  219 (250)
Q Consensus       200 ~~~a~~ll~hp~~~~~~~~~  219 (250)
                         |+++|+||||++.+|..
T Consensus       292 ---a~e~L~Hpf~~~~~~~~  308 (322)
T d1s9ja_         292 ---LKQLMVHAFIKRSDAEE  308 (322)
T ss_dssp             ---HHHHHTSHHHHHHHHSC
T ss_pred             ---HHHHhhCHhhCcCCccc
Confidence               99999999999877654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=247.45  Aligned_cols=141  Identities=30%  Similarity=0.439  Sum_probs=117.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.......                                          
T Consensus       128 ~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~------------------------------------------  165 (288)
T d2jfla1         128 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ------------------------------------------  165 (288)
T ss_dssp             HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH------------------------------------------
T ss_pred             HCCEEEeecChhheeECCCCCEEEEechhhhccCCCcc------------------------------------------
Confidence            36999999999999999999999999999854321100                                          


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceec-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVS-----GEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                 .....+||+.|+|||++.     +..++.++||||+||++|+|++|..||.+.
T Consensus       166 ---------------------------~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~  218 (288)
T d2jfla1         166 ---------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL  218 (288)
T ss_dssp             ---------------------------HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ---------------------------cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence                                       011247999999999985     345799999999999999999999999998


Q ss_pred             ChHHHHHHHHHhccC-CCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          156 DHELTLANIVARALE-FPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~-~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +..+.+.++...... ...+..+++++.+||.+||+.||++|||    ++++|+||||..
T Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~ell~hp~~~~  274 (288)
T d2jfla1         219 NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWT----TSQLLQHPFVTV  274 (288)
T ss_dssp             CGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSGGGCC
T ss_pred             CHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCC
Confidence            888888888776543 3334578999999999999999999999    999999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-35  Score=245.82  Aligned_cols=146  Identities=36%  Similarity=0.547  Sum_probs=119.4

Q ss_pred             ccceeecCCCCcEEeCCCC----CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG----HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVP   77 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~----~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (250)
                      +|||||||||+||+++.++    .+||+|||+++......                                        
T Consensus       132 ~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~----------------------------------------  171 (293)
T d1jksa_         132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------------------------------  171 (293)
T ss_dssp             TTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC----------------------------------------
T ss_pred             cceeecccccceEEEecCCCcccceEecchhhhhhcCCCc----------------------------------------
Confidence            6999999999999998766    59999999985543211                                        


Q ss_pred             CccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q 025601           78 AVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDH  157 (250)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~  157 (250)
                                                    ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+.
T Consensus       172 ------------------------------~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  221 (293)
T d1jksa_         172 ------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK  221 (293)
T ss_dssp             ------------------------------BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ------------------------------cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH
Confidence                                          01123689999999999998899999999999999999999999999998


Q ss_pred             HHHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCCccccc
Q 025601          158 ELTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVNWALLR  221 (250)
Q Consensus       158 ~~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~~~~~~  221 (250)
                      .+.+.++......++.  ...++.++.+||.+||+.||++|||    ++++|+||||++.+|....
T Consensus       222 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~~~~~~~l  283 (293)
T d1jksa_         222 QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQAL  283 (293)
T ss_dssp             HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTCC-------
T ss_pred             HHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccCCCChhHhh
Confidence            8888888776655443  2568999999999999999999999    9999999999999987653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-35  Score=247.77  Aligned_cols=166  Identities=44%  Similarity=0.778  Sum_probs=130.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.+|.+||+|||+++.........                                         
T Consensus       148 ~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~-----------------------------------------  186 (322)
T d1vzoa_         148 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-----------------------------------------  186 (322)
T ss_dssp             TTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG-----------------------------------------
T ss_pred             CCEEeccCCccceeecCCCCEEEeeccchhhhccccccc-----------------------------------------
Confidence            689999999999999999999999999986544322110                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG--HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                 .....|++.|+|||++.+..  ++.++||||+||++|+|++|..||.+.....
T Consensus       187 ---------------------------~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~  239 (322)
T d1vzoa_         187 ---------------------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN  239 (322)
T ss_dssp             ---------------------------GCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC
T ss_pred             ---------------------------ccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                                       11236889999999998654  6889999999999999999999998765444


Q ss_pred             HHHHHHHh--ccCCCCCCCCChHHHHHHHHhcccCccccCCCc-cChHHHhcCCCCCCCCcccc--ccCCCCCCCCCCCc
Q 025601          160 TLANIVAR--ALEFPKEPAVPATAKDLISQLLAKDPERRLGST-KGASAIKHHPFFQGVNWALL--RCTTPPFVPPPFNR  234 (250)
Q Consensus       160 ~~~~i~~~--~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~-~~a~~ll~hp~~~~~~~~~~--~~~~~~~~~~~~~~  234 (250)
                      ....+...  ....+.+..+++++.+||.+||.+||++|+++. ..|+|+|+||||++++|..+  +++.+|++|...+.
T Consensus       240 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~  319 (322)
T d1vzoa_         240 SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDE  319 (322)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-
T ss_pred             HHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCC
Confidence            43333332  223344457999999999999999999999754 34999999999999999876  55778888887765


Q ss_pred             C
Q 025601          235 E  235 (250)
Q Consensus       235 ~  235 (250)
                      .
T Consensus       320 ~  320 (322)
T d1vzoa_         320 L  320 (322)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-35  Score=241.58  Aligned_cols=134  Identities=22%  Similarity=0.406  Sum_probs=109.1

Q ss_pred             ceeecCCCCcEEeC-CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcccc
Q 025601            4 IVYRDLKPENVLVR-SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSCF   82 (250)
Q Consensus         4 iiHrDIKp~Nill~-~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (250)
                      ||||||||+|||++ .++.+||+|||+++......                                             
T Consensus       135 IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~---------------------------------------------  169 (270)
T d1t4ha_         135 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---------------------------------------------  169 (270)
T ss_dssp             CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS---------------------------------------------
T ss_pred             EEeCCcChhhceeeCCCCCEEEeecCcceeccCCc---------------------------------------------
Confidence            99999999999997 57899999999985322110                                             


Q ss_pred             CccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 025601           83 RPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTLA  162 (250)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~~  162 (250)
                                                ..+.+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+......+.
T Consensus       170 --------------------------~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~  222 (270)
T d1t4ha_         170 --------------------------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY  222 (270)
T ss_dssp             --------------------------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH
T ss_pred             --------------------------cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHH
Confidence                                      112479999999999876 49999999999999999999999998876665554


Q ss_pred             HHHHhc-cCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          163 NIVARA-LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       163 ~i~~~~-~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      +.+... .+......+++++.+||.+||+.||++|||    ++|+|+||||+
T Consensus       223 ~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~ell~Hp~fk  270 (270)
T d1t4ha_         223 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQ  270 (270)
T ss_dssp             HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC
T ss_pred             HHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcC----HHHHhCCcccC
Confidence            444333 222334567899999999999999999999    99999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=9.7e-35  Score=248.01  Aligned_cols=141  Identities=34%  Similarity=0.568  Sum_probs=121.7

Q ss_pred             CccceeecCCCCcEEeC--CCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVR--SDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~--~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      ++|||||||||+|||++  .++.+||+|||+++.......                                        
T Consensus       145 ~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~----------------------------------------  184 (352)
T d1koba_         145 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI----------------------------------------  184 (352)
T ss_dssp             HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred             HCCeeecccccccccccccCCCeEEEeecccceecCCCCc----------------------------------------
Confidence            36999999999999998  568999999999865432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       185 ------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  234 (352)
T d1koba_         185 ------------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL  234 (352)
T ss_dssp             ------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ------------------------------eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence                                          01236899999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGV  215 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~  215 (250)
                      +.+.++......++..  ..++.++.+||.+||++||++|||    ++++|+||||++.
T Consensus       235 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil~Hp~~~~~  289 (352)
T d1koba_         235 ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGD  289 (352)
T ss_dssp             HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSC
T ss_pred             HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhCCC
Confidence            8888888876655443  578999999999999999999999    9999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=235.76  Aligned_cols=142  Identities=33%  Similarity=0.470  Sum_probs=116.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       121 ~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------  157 (298)
T d1gz8a_         121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-------------------------------------------  157 (298)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-------------------------------------------
T ss_pred             CCEEccccCchheeecccCcceeccCCcceeccCCcc-------------------------------------------
Confidence            6999999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......||+.|+|||++.... ++.++||||+||++|+|++|+.||.+.+..+.
T Consensus       158 --------------------------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~  211 (298)
T d1gz8a_         158 --------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ  211 (298)
T ss_dssp             --------------------------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHH
Confidence                                      111246899999999988766 58999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCCC---------------------------CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          161 LANIVARALEFPKE---------------------------PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p~~---------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      +.++....+.....                           ..++.++++||.+||+.||++|||    ++++|+||||+
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t----~~ell~H~ff~  287 (298)
T d1gz8a_         212 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQ  287 (298)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGT
T ss_pred             HHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcC----HHHHhCCHhhc
Confidence            88776543321111                           356788999999999999999999    99999999999


Q ss_pred             CCC
Q 025601          214 GVN  216 (250)
Q Consensus       214 ~~~  216 (250)
                      +++
T Consensus       288 ~~~  290 (298)
T d1gz8a_         288 DVT  290 (298)
T ss_dssp             TCC
T ss_pred             cCC
Confidence            874

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=233.83  Aligned_cols=133  Identities=31%  Similarity=0.523  Sum_probs=109.2

Q ss_pred             CccceeecCCCCcEEeCCC-CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSD-GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~-~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.+ +.+||+|||+++......                                          
T Consensus       128 ~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~------------------------------------------  165 (273)
T d1xwsa_         128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------  165 (273)
T ss_dssp             HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred             HCCCccccCcccceEEecCCCeEEECccccceeccccc------------------------------------------
Confidence            3699999999999999855 789999999985432110                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGH-GSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                   ...+.||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.   
T Consensus       166 -----------------------------~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~---  213 (273)
T d1xwsa_         166 -----------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD---  213 (273)
T ss_dssp             -----------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH---
T ss_pred             -----------------------------ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc---
Confidence                                         112469999999999987765 67799999999999999999999763   


Q ss_pred             HHHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          159 LTLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                         .++......+  ...+|+++.+||.+||+.||++|||    ++++|+||||+++.
T Consensus       214 ---~~i~~~~~~~--~~~~s~~~~~li~~~L~~dp~~R~s----~~eil~hp~~~~~~  262 (273)
T d1xwsa_         214 ---EEIIRGQVFF--RQRVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVL  262 (273)
T ss_dssp             ---HHHHHCCCCC--SSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCC
T ss_pred             ---hHHhhcccCC--CCCCCHHHHHHHHHHccCCHhHCcC----HHHHhcCHhhCCCC
Confidence               2344444444  4479999999999999999999999    99999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.98  E-value=3e-33  Score=231.35  Aligned_cols=139  Identities=40%  Similarity=0.645  Sum_probs=118.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.++.+||+|||+++......                                            
T Consensus       129 ~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~--------------------------------------------  164 (277)
T d1phka_         129 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--------------------------------------------  164 (277)
T ss_dssp             TTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC--------------------------------------------
T ss_pred             cCCcccccccceEEEcCCCCeEEccchheeEccCCC--------------------------------------------
Confidence            699999999999999999999999999986543211                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC------CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG------EGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                .....+||+.|+|||++.+      ..++.++||||+||++|+|++|+.||.+.
T Consensus       165 --------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~  218 (277)
T d1phka_         165 --------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR  218 (277)
T ss_dssp             --------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------------------ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCC
Confidence                                      0112468999999999863      34688999999999999999999999999


Q ss_pred             ChHHHHHHHHHhccCCCC--CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          156 DHELTLANIVARALEFPK--EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       156 ~~~~~~~~i~~~~~~~p~--~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.......+..+....+.  ...+|+++.+||.+||+.||++||+    ++++|+||||+.
T Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s----~~eil~h~~~~~  275 (277)
T d1phka_         219 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQ  275 (277)
T ss_dssp             SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCT
T ss_pred             CHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC----HHHHHcCHHHHH
Confidence            988888888877655433  3478999999999999999999999    999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.2e-32  Score=235.01  Aligned_cols=144  Identities=31%  Similarity=0.490  Sum_probs=116.9

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.++ .+||+|||+++......                                          
T Consensus       140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------  177 (350)
T d1q5ka_         140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------  177 (350)
T ss_dssp             TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS------------------------------------------
T ss_pred             hcCCcccCCCcceEEEecCCCceeEecccchhhccCCc------------------------------------------
Confidence            57999999999999999775 89999999985543211                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  ...+.+||+.|+|||++.+. .++.++||||+||++|||++|..||.+.+..
T Consensus       178 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~  229 (350)
T d1q5ka_         178 ----------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV  229 (350)
T ss_dssp             ----------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH
T ss_pred             ----------------------------ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH
Confidence                                        01124689999999998864 5899999999999999999999999998888


Q ss_pred             HHHHHHHHhccC-----------------CCC----------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          159 LTLANIVARALE-----------------FPK----------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       159 ~~~~~i~~~~~~-----------------~p~----------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +++.++.+..+.                 ++.          ...+++++.+||.+||++||++|||    |+|+|+|||
T Consensus       230 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~  305 (350)
T d1q5ka_         230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PLEACAHSF  305 (350)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGG
T ss_pred             HHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHh
Confidence            887777653221                 111          1346889999999999999999999    999999999


Q ss_pred             CCCCCcc
Q 025601          212 FQGVNWA  218 (250)
Q Consensus       212 ~~~~~~~  218 (250)
                      |+++...
T Consensus       306 f~~~~~~  312 (350)
T d1q5ka_         306 FDELRDP  312 (350)
T ss_dssp             GGGGGCT
T ss_pred             hccccCC
Confidence            9987543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.2e-33  Score=238.86  Aligned_cols=137  Identities=21%  Similarity=0.314  Sum_probs=116.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.++.+||+|||+++........                                          
T Consensus       183 ~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~------------------------------------------  220 (325)
T d1rjba_         183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY------------------------------------------  220 (325)
T ss_dssp             TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS------------------------------------------
T ss_pred             CCeeeccCchhccccccCCeEEEeeccccccccCCCce------------------------------------------
Confidence            68999999999999999999999999998653322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+....
T Consensus       221 -------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         221 -------------------------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             -------------------------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             -------------------------eeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     00112358999999999999999999999999999999997 8999999888788


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +.+++.....++.+..+++++.+||.+||+.||++|||    +++|++|
T Consensus       276 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt----~~ei~~~  320 (325)
T d1rjba_         276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTSF  320 (325)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            88888888777888889999999999999999999999    7777654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.98  E-value=5.6e-33  Score=230.73  Aligned_cols=140  Identities=26%  Similarity=0.445  Sum_probs=112.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||++........                                           
T Consensus       119 ~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~-------------------------------------------  155 (286)
T d1ob3a_         119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-------------------------------------------  155 (286)
T ss_dssp             TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------------------------------------------
T ss_pred             CcEEecCCCCceeeEcCCCCEEecccccceecccCcc-------------------------------------------
Confidence            6999999999999999999999999998754322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+++.|+|||++.+.. ++.++||||+||++|||++|+.||.+.+..++
T Consensus       156 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~  209 (286)
T d1ob3a_         156 --------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ  209 (286)
T ss_dssp             --------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH
Confidence                                      111236889999999998754 69999999999999999999999999988888


Q ss_pred             HHHHHHhccCCCC---------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          161 LANIVARALEFPK---------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p~---------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      +.++....+....                           ...+++.+.+||.+||++||++|||    |+|+|+||||+
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s----~~ell~Hp~f~  285 (286)
T d1ob3a_         210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFK  285 (286)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGG
T ss_pred             HHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcC----HHHHhcCcccC
Confidence            8777654332111                           1346788999999999999999999    99999999997


Q ss_pred             C
Q 025601          214 G  214 (250)
Q Consensus       214 ~  214 (250)
                      +
T Consensus       286 ~  286 (286)
T d1ob3a_         286 E  286 (286)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.5e-32  Score=227.03  Aligned_cols=137  Identities=23%  Similarity=0.378  Sum_probs=107.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.........                                         
T Consensus       123 ~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~-----------------------------------------  161 (276)
T d1uwha_         123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH-----------------------------------------  161 (276)
T ss_dssp             TTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------------------------------------------------
T ss_pred             CCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc-----------------------------------------
Confidence            699999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE---GHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                ...+..||+.|+|||++.+.   .++.++|||||||++|||++|+.||.+....
T Consensus       162 --------------------------~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~  215 (276)
T d1uwha_         162 --------------------------QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR  215 (276)
T ss_dssp             ------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred             --------------------------cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH
Confidence                                      11124689999999999753   3799999999999999999999999998877


Q ss_pred             HHHHHHHHhccCCC----CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          159 LTLANIVARALEFP----KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       159 ~~~~~i~~~~~~~p----~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ..+..++......|    ....+++++.+||.+||+.||++|||    +++++.+
T Consensus       216 ~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt----~~~il~~  266 (276)
T d1uwha_         216 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL----FPQILAS  266 (276)
T ss_dssp             HHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence            77766666554433    23568999999999999999999999    7776654

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-32  Score=229.94  Aligned_cols=146  Identities=30%  Similarity=0.418  Sum_probs=115.5

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.........                                        
T Consensus       135 ~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~----------------------------------------  174 (318)
T d3blha1         135 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ----------------------------------------  174 (318)
T ss_dssp             HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC---------------------------------------------
T ss_pred             cCCEEecCcCchheeecCCCcEEeeecceeeecccccccc----------------------------------------
Confidence            3699999999999999999999999999986543221100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGE-GHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                               .....+.+||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+.....
T Consensus       175 -------------------------~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~  229 (318)
T d3blha1         175 -------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH  229 (318)
T ss_dssp             -------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -------------------------cccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH
Confidence                                     0011124699999999999875 58999999999999999999999999988888


Q ss_pred             HHHHHHHhccCCCCCC------------------------------CCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEP------------------------------AVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~------------------------------~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .+..+....+.++...                              ..+..+.+||.+||++||++|+|    |+|+|.|
T Consensus       230 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~s----a~elL~H  305 (318)
T d3blha1         230 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID----SDDALNH  305 (318)
T ss_dssp             HHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCC----HHHHHHS
T ss_pred             HHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcC----HHHHHcC
Confidence            7777666544332220                              12567789999999999999999    9999999


Q ss_pred             CCCCCC
Q 025601          210 PFFQGV  215 (250)
Q Consensus       210 p~~~~~  215 (250)
                      |||+..
T Consensus       306 pff~~~  311 (318)
T d3blha1         306 DFFWSD  311 (318)
T ss_dssp             GGGSSS
T ss_pred             hhhccC
Confidence            999863

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-32  Score=232.00  Aligned_cols=141  Identities=31%  Similarity=0.491  Sum_probs=115.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++......                                            
T Consensus       140 ~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------  175 (346)
T d1cm8a_         140 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM--------------------------------------------  175 (346)
T ss_dssp             TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC--------------------------------------------
T ss_pred             CCCcccccCcchhhcccccccccccccceeccCCcc--------------------------------------------
Confidence            699999999999999999999999999985432110                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                  ....||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+....
T Consensus       176 ----------------------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~  227 (346)
T d1cm8a_         176 ----------------------------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ  227 (346)
T ss_dssp             ----------------------------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----------------------------ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH
Confidence                                        1236899999999998754 69999999999999999999999999887777


Q ss_pred             HHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCC
Q 025601          161 LANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPF  211 (250)
Q Consensus       161 ~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~  211 (250)
                      +..+....+..+.                             ...+++.+.+||.+||+.||++|||    |+++|+|||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~eiL~Hp~  303 (346)
T d1cm8a_         228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGEALAHPY  303 (346)
T ss_dssp             HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGG
T ss_pred             HHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcC----HHHHhcChh
Confidence            6665543322111                             1356889999999999999999999    999999999


Q ss_pred             CCCCCcc
Q 025601          212 FQGVNWA  218 (250)
Q Consensus       212 ~~~~~~~  218 (250)
                      |+++.+.
T Consensus       304 f~~~~~~  310 (346)
T d1cm8a_         304 FESLHDT  310 (346)
T ss_dssp             GTTTC--
T ss_pred             hCcCCCc
Confidence            9997643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-33  Score=235.97  Aligned_cols=139  Identities=29%  Similarity=0.510  Sum_probs=108.3

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +||+||||||+|||++.   ++.+||+|||+++.......                                        
T Consensus       130 ~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~----------------------------------------  169 (335)
T d2ozaa1         130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----------------------------------------  169 (335)
T ss_dssp             TTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC----------------------------------------
T ss_pred             cCCccccccccccccccccccccccccccceeeeccCCCc----------------------------------------
Confidence            69999999999999985   46799999999865432211                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+....
T Consensus       170 ------------------------------~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~  219 (335)
T d2ozaa1         170 ------------------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  219 (335)
T ss_dssp             ------------------------------CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC
T ss_pred             ------------------------------cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHH
Confidence                                          11236999999999999988999999999999999999999999876654


Q ss_pred             HHHHHHHH----hccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVA----RALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~----~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      .....+..    ....+|..  ..+++++.+||.+||+.||++|||    ++++|+||||.+
T Consensus       220 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~eil~hp~~~~  277 (335)
T d2ozaa1         220 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQ  277 (335)
T ss_dssp             --------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC----HHHHHcCHHhhC
Confidence            44433332    22223322  257899999999999999999999    999999999964

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-32  Score=229.43  Aligned_cols=138  Identities=19%  Similarity=0.302  Sum_probs=109.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++........                                         
T Consensus       152 ~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-----------------------------------------  190 (299)
T d1ywna1         152 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-----------------------------------------  190 (299)
T ss_dssp             HTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTS-----------------------------------------
T ss_pred             hCCCcCCcCCccceeECCCCcEEEccCcchhhccccccc-----------------------------------------
Confidence            368999999999999999999999999998654322110                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG-VTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg-~~pf~~~~~~~  159 (250)
                                                .......||+.|+|||++.+..++.++|||||||++|||++| ..||.+.....
T Consensus       191 --------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~  244 (299)
T d1ywna1         191 --------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  244 (299)
T ss_dssp             --------------------------CCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred             --------------------------cccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH
Confidence                                      011134689999999999999999999999999999999986 56888877666


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      .+.+++......+.+..+++++.+||.+||+.||++|||    ++++++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt----~~eil~~  290 (299)
T d1ywna1         245 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH  290 (299)
T ss_dssp             HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            777777766666777789999999999999999999999    7777765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-33  Score=234.11  Aligned_cols=140  Identities=24%  Similarity=0.474  Sum_probs=119.5

Q ss_pred             CccceeecCCCCcEEeCCC--CCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            1 MLGIVYRDLKPENVLVRSD--GHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~--~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      ++|||||||||+|||++.+  +.+||+|||+++.......                                        
T Consensus       120 ~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~----------------------------------------  159 (321)
T d1tkia_         120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN----------------------------------------  159 (321)
T ss_dssp             HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE----------------------------------------
T ss_pred             HcCCCcccccccceeecCCCceEEEEcccchhhccccCCc----------------------------------------
Confidence            3799999999999999854  4799999999855432110                                        


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                    .....+|+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..
T Consensus       160 ------------------------------~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~  209 (321)
T d1tkia_         160 ------------------------------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ  209 (321)
T ss_dssp             ------------------------------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ------------------------------ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH
Confidence                                          01236889999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCC--CCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCC
Q 025601          159 LTLANIVARALEFPKE--PAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQG  214 (250)
Q Consensus       159 ~~~~~i~~~~~~~p~~--~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~  214 (250)
                      +.+.++......++..  ..++.++.+||.+||+.||++|||    ++++|+||||++
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~eil~hp~~~~  263 (321)
T d1tkia_         210 QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQ  263 (321)
T ss_dssp             HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHS
T ss_pred             HHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCHhhcc
Confidence            9999998877665442  368999999999999999999999    999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-32  Score=224.71  Aligned_cols=139  Identities=22%  Similarity=0.346  Sum_probs=110.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       128 ~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~------------------------------------------  165 (272)
T d1qpca_         128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------------------------------------------  165 (272)
T ss_dssp             TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE------------------------------------------
T ss_pred             CCcccCccchhheeeecccceeeccccceEEccCCccc------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCC-CCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVT-PFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~-pf~~~~~~~~  160 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||+||.. ||......+.
T Consensus       166 --------------------------~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~  219 (272)
T d1qpca_         166 --------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV  219 (272)
T ss_dssp             --------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      0112358899999999998889999999999999999999655 4555555555


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc--CCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH--HPFFQ  213 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~--hp~~~  213 (250)
                      +..+ ......+.+..++.++.+||.+||+.||++|||    +++++.  ++||.
T Consensus       220 ~~~i-~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt----~~ei~~~L~~~ft  269 (272)
T d1qpca_         220 IQNL-ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT----FDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHH
T ss_pred             HHHH-HhcCCCCCcccChHHHHHHHHHHcCCCHhHCcC----HHHHHHHhhhhhh
Confidence            5554 445556667789999999999999999999999    777665  56653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-33  Score=229.11  Aligned_cols=148  Identities=23%  Similarity=0.312  Sum_probs=115.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++..........                                       
T Consensus       125 ~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~---------------------------------------  165 (277)
T d1xbba_         125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK---------------------------------------  165 (277)
T ss_dssp             HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE---------------------------------------
T ss_pred             hCCcccCCCcchhhcccccCcccccchhhhhhccccccccc---------------------------------------
Confidence            36899999999999999999999999999866433211100                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+
T Consensus       166 ---------------------------~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~  218 (277)
T d1xbba_         166 ---------------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  218 (277)
T ss_dssp             ---------------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ---------------------------cccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH
Confidence                                       0112358899999999998889999999999999999997 899999988777


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      ....+.. ....+.+..+|.++.+||.+||+.||++|||+.+ +.+.|+|+|++-++
T Consensus       219 ~~~~i~~-~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~-i~~~L~~~~~~~~~  273 (277)
T d1xbba_         219 VTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAA-VELRLRNYYYDVVN  273 (277)
T ss_dssp             HHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH-HHHHHHHHHHHHHH
T ss_pred             HHHHHHc-CCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHH-HHHHhhCHHhhcCC
Confidence            6665544 4455666789999999999999999999999444 22336677765444

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=9e-32  Score=227.54  Aligned_cols=144  Identities=25%  Similarity=0.393  Sum_probs=110.6

Q ss_pred             CccceeecCCCCcEEeCCCC-CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCc
Q 025601            1 MLGIVYRDLKPENVLVRSDG-HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAV   79 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~-~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (250)
                      ++|||||||||+|||++.++ .+||+|||+++......                                          
T Consensus       147 ~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~------------------------------------------  184 (328)
T d3bqca1         147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ------------------------------------------  184 (328)
T ss_dssp             HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC------------------------------------------
T ss_pred             hcccccccccccceEEcCCCCeeeecccccceeccCCC------------------------------------------
Confidence            37999999999999998755 68999999985433211                                          


Q ss_pred             cccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           80 SCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                  .....++|+.|+|||++.+.. ++.++||||+||+++++++|..||......
T Consensus       185 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         185 ----------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             ----------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ----------------------------cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence                                        011236899999999988765 799999999999999999999999765433


Q ss_pred             -HHHHHHHHhc-----------------------------------cCCCCCCCCChHHHHHHHHhcccCccccCCCccC
Q 025601          159 -LTLANIVARA-----------------------------------LEFPKEPAVPATAKDLISQLLAKDPERRLGSTKG  202 (250)
Q Consensus       159 -~~~~~i~~~~-----------------------------------~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~  202 (250)
                       .+...+....                                   ........+++++.+||.+||++||++|+|    
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----  312 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT----  312 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCC----
T ss_pred             HHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcC----
Confidence             2222222110                                   000111346788999999999999999999    


Q ss_pred             hHHHhcCCCCCCCCcc
Q 025601          203 ASAIKHHPFFQGVNWA  218 (250)
Q Consensus       203 a~~ll~hp~~~~~~~~  218 (250)
                      |+++|+||||+++.|+
T Consensus       313 a~e~L~Hp~F~~v~~~  328 (328)
T d3bqca1         313 AREAMEHPYFYTVVKD  328 (328)
T ss_dssp             HHHHHTSGGGTTSCCC
T ss_pred             HHHHhcCcccCCCCCC
Confidence            9999999999999985

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-32  Score=227.64  Aligned_cols=145  Identities=21%  Similarity=0.246  Sum_probs=116.2

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+||+++.++.+||+|||+++.........                                        
T Consensus       127 ~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~----------------------------------------  166 (285)
T d1u59a_         127 EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY----------------------------------------  166 (285)
T ss_dssp             HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE----------------------------------------
T ss_pred             hCCeecCcCchhheeeccCCceeeccchhhhccccccccc----------------------------------------
Confidence            3699999999999999999999999999986654321100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                .......||+.|+|||++.+..++.++|||||||++|||+| |..||.+.+..+
T Consensus       167 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~  220 (285)
T d1u59a_         167 --------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE  220 (285)
T ss_dssp             --------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH
T ss_pred             --------------------------ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence                                      00112358899999999998889999999999999999998 999999988877


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      ....+.. ....+.+..+|+++.+||.+||+.||++|||+.+ +.+.|+|+|+.
T Consensus       221 ~~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~-i~~~L~~~~~~  272 (285)
T d1u59a_         221 VMAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDRPDFLT-VEQRMRACYYS  272 (285)
T ss_dssp             HHHHHHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH-HHHHHHHHHHH
T ss_pred             HHHHHHc-CCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHH-HHHHHHHHHHH
Confidence            7666554 4445566789999999999999999999999655 33446777763

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=221.35  Aligned_cols=137  Identities=22%  Similarity=0.256  Sum_probs=102.4

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++..........                                       
T Consensus       128 ~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~---------------------------------------  168 (283)
T d1mqba_         128 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY---------------------------------------  168 (283)
T ss_dssp             HTTCCCSCCCGGGEEECTTCCEEECCCCC---------------------------------------------------
T ss_pred             ccccccCccccceEEECCCCeEEEcccchhhcccCCCccce---------------------------------------
Confidence            36899999999999999999999999999866433211100                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                 ......||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus       169 ---------------------------~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~  221 (283)
T d1mqba_         169 ---------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE  221 (283)
T ss_dssp             --------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---------------------------EeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH
Confidence                                       01123588999999999999999999999999999999996666554444444


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +.+.+......+.+..++.++.+||.+||+.||++|||    +.+++
T Consensus       222 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt----~~eil  264 (283)
T d1mqba_         222 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPK----FADIV  264 (283)
T ss_dssp             HHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCC----HHHHH
T ss_pred             HHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcC----HHHHH
Confidence            44555555666777789999999999999999999999    55554

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.8e-31  Score=222.96  Aligned_cols=135  Identities=24%  Similarity=0.362  Sum_probs=101.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++...........                                       
T Consensus       147 ~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~---------------------------------------  187 (299)
T d1jpaa_         147 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY---------------------------------------  187 (299)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECCC------------------------------------------------------
T ss_pred             CCCccCccccceEEECCCCcEEECCcccceEccCCCCccee---------------------------------------
Confidence            68999999999999999999999999998765432211100                                       


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.+....+.
T Consensus       188 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~  242 (299)
T d1jpaa_         188 -------------------------TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV  242 (299)
T ss_dssp             ---------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             -------------------------eecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     01112357899999999999899999999999999999998 8999999888777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      +..+.. ....+.+..++.++.+||.+||+.||++|||+.+
T Consensus       243 ~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~e  282 (299)
T d1jpaa_         243 INAIEQ-DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ  282 (299)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHHc-CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHH
Confidence            766544 4556667789999999999999999999999443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.9e-31  Score=227.13  Aligned_cols=146  Identities=26%  Similarity=0.430  Sum_probs=113.6

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.........                                        
T Consensus       127 ~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~----------------------------------------  166 (345)
T d1pmea_         127 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT----------------------------------------  166 (345)
T ss_dssp             HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC----------------------------------------
T ss_pred             HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccc----------------------------------------
Confidence            3699999999999999999999999999985543221100                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSG-EGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                ......+||+.|+|||++.. ..++.++||||+||++|+|++|+.||.+.....
T Consensus       167 --------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~  220 (345)
T d1pmea_         167 --------------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD  220 (345)
T ss_dssp             --------------------------CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             --------------------------eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH
Confidence                                      00112368999999999865 457999999999999999999999999887666


Q ss_pred             HHHHHHHhccCC--------------------CC---------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEF--------------------PK---------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~--------------------p~---------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+.......                    +.         ...++.++.+||.+||+.||++|||    |+++|+||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----a~e~L~hp  296 (345)
T d1pmea_         221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQALAHP  296 (345)
T ss_dssp             HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSG
T ss_pred             HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcC----HHHHhcCH
Confidence            555544322111                    00         1356788999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||+...
T Consensus       297 f~~~~~  302 (345)
T d1pmea_         297 YLEQYY  302 (345)
T ss_dssp             GGTTTC
T ss_pred             hhccCC
Confidence            999653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.3e-31  Score=222.51  Aligned_cols=135  Identities=17%  Similarity=0.224  Sum_probs=110.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++........                                          
T Consensus       134 ~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~------------------------------------------  171 (287)
T d1opja_         134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------------------------  171 (287)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE------------------------------------------
T ss_pred             CCcccCccccCeEEECCCCcEEEccccceeecCCCCce------------------------------------------
Confidence            68999999999999999999999999998654332110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||++|..||........+
T Consensus       172 --------------------------~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~  225 (287)
T d1opja_         172 --------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  225 (287)
T ss_dssp             --------------------------EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             --------------------------eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHH
Confidence                                      001125788999999999999999999999999999999987776655555566


Q ss_pred             HHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          162 ANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       162 ~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .+++......+.+..+++++.+||.+||+.||++|||    ++++++
T Consensus       226 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ei~~  268 (287)
T d1opja_         226 YELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPS----FAEIHQ  268 (287)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcC----HHHHHH
Confidence            6667777677777789999999999999999999999    766654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=218.87  Aligned_cols=135  Identities=21%  Similarity=0.347  Sum_probs=101.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       120 ~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~------------------------------------------  157 (263)
T d1sm2a_         120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT------------------------------------------  157 (263)
T ss_dssp             TTCCCTTCSGGGEEECGGGCEEECSCC-----------------------------------------------------
T ss_pred             cceeecccchhheeecCCCCeEecccchheeccCCCce------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||++ |..||...+..+.
T Consensus       158 --------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~  211 (263)
T d1sm2a_         158 --------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV  211 (263)
T ss_dssp             ---------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHH
T ss_pred             --------------------------eecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                      0112368999999999999999999999999999999999 5666666666666


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      +..+.. ......+..+++++.+||.+||+.||++|||    ++++++|
T Consensus       212 ~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps----~~~il~~  255 (263)
T d1sm2a_         212 VEDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPA----FSRLLRQ  255 (263)
T ss_dssp             HHHHHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHh-cCCCCCccccCHHHHHHHHHHccCCHhHCcC----HHHHHHH
Confidence            665544 4455566788999999999999999999999    7776654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-31  Score=218.13  Aligned_cols=140  Identities=26%  Similarity=0.351  Sum_probs=108.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      .||+||||||+|||++.++.+||+|||+++........                                          
T Consensus       132 ~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~------------------------------------------  169 (285)
T d1fmka3         132 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT------------------------------------------  169 (285)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------------------------------------------
T ss_pred             hheecccccceEEEECCCCcEEEcccchhhhccCCCce------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCC-CCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPF-RGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf-~~~~~~~~  160 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||++|..|| .+....+.
T Consensus       170 --------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~  223 (285)
T d1fmka3         170 --------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV  223 (285)
T ss_dssp             --------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --------------------------eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHH
Confidence                                      001235899999999999999999999999999999999966555 45555445


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc--CCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH--HPFFQG  214 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~--hp~~~~  214 (250)
                      +.. +......+.+..+++++.+||.+||+.||++||+    +++++.  ++||..
T Consensus       224 ~~~-i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~~i~~~L~~~~~~  274 (285)
T d1fmka3         224 LDQ-VERGYRMPCPPECPESLHDLMCQCWRKEPEERPT----FEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHH-HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHTTTSC
T ss_pred             HHH-HHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcC----HHHHHHHHhhhhcC
Confidence            544 4455566777889999999999999999999999    888766  788866

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=228.04  Aligned_cols=151  Identities=29%  Similarity=0.433  Sum_probs=113.7

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+|++|||+++......                                            
T Consensus       138 ~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~--------------------------------------------  173 (355)
T d2b1pa1         138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------  173 (355)
T ss_dssp             TTCCCSCCCGGGEEECTTCCEEECCCCC----------------------------------------------------
T ss_pred             cccccccCCccccccccccceeeechhhhhcccccc--------------------------------------------
Confidence            699999999999999999999999999874432211                                            


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELTL  161 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~~  161 (250)
                                                .....++|+.|+|||++.+..++.++||||+||++++|++|+.||.+.+.....
T Consensus       174 --------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~  227 (355)
T d2b1pa1         174 --------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW  227 (355)
T ss_dssp             ---------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             --------------------------ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHH
Confidence                                      111236899999999999998999999999999999999999999998877776


Q ss_pred             HHHHHhccCCCCC----------------------------------------CCCChHHHHHHHHhcccCccccCCCcc
Q 025601          162 ANIVARALEFPKE----------------------------------------PAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       162 ~~i~~~~~~~p~~----------------------------------------~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      .+++.........                                        ...+.++.+||.+||.+||++|||   
T Consensus       228 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t---  304 (355)
T d2b1pa1         228 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS---  304 (355)
T ss_dssp             HHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC---
T ss_pred             HHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcC---
Confidence            6665433211000                                        012456899999999999999999   


Q ss_pred             ChHHHhcCCCCCCCCccccccCCCC
Q 025601          202 GASAIKHHPFFQGVNWALLRCTTPP  226 (250)
Q Consensus       202 ~a~~ll~hp~~~~~~~~~~~~~~~~  226 (250)
                       |+|+|+||||+...+.......+|
T Consensus       305 -a~elL~Hpw~~~~~~~~~~~~~~~  328 (355)
T d2b1pa1         305 -VDDALQHPYINVWYDPAEVEAPPP  328 (355)
T ss_dssp             -HHHHHTSTTTGGGCCHHHHTCCCC
T ss_pred             -HHHHhcCcccCCCCCcccccCCCC
Confidence             999999999998655555444444

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6e-31  Score=224.05  Aligned_cols=140  Identities=31%  Similarity=0.438  Sum_probs=112.8

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.+|.+|++|||++......                                            
T Consensus       139 ~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~--------------------------------------------  174 (348)
T d2gfsa1         139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------  174 (348)
T ss_dssp             HTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG--------------------------------------------
T ss_pred             hCCCcccccCCccccccccccccccccchhcccCcc--------------------------------------------
Confidence            369999999999999999999999999987432211                                            


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~~~~~~  159 (250)
                                                  .....||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+...
T Consensus       175 ----------------------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~  226 (348)
T d2gfsa1         175 ----------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID  226 (348)
T ss_dssp             ----------------------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ----------------------------cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHH
Confidence                                        11236889999999988765 6899999999999999999999999998887


Q ss_pred             HHHHHHHhccCCCC-----------------------------CCCCChHHHHHHHHhcccCccccCCCccChHHHhcCC
Q 025601          160 TLANIVARALEFPK-----------------------------EPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHP  210 (250)
Q Consensus       160 ~~~~i~~~~~~~p~-----------------------------~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp  210 (250)
                      ....+....+..+.                             ...+++++++||.+||+.||++|+|    |+++|+||
T Consensus       227 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~t----a~elL~Hp  302 (348)
T d2gfsa1         227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQALAHA  302 (348)
T ss_dssp             HHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSG
T ss_pred             HHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcC----HHHHhcCH
Confidence            77777654433211                             1357889999999999999999999    99999999


Q ss_pred             CCCCCC
Q 025601          211 FFQGVN  216 (250)
Q Consensus       211 ~~~~~~  216 (250)
                      ||++..
T Consensus       303 ~f~~~~  308 (348)
T d2gfsa1         303 YFAQYH  308 (348)
T ss_dssp             GGTTTC
T ss_pred             hhCCCC
Confidence            999854

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-30  Score=213.61  Aligned_cols=135  Identities=19%  Similarity=0.322  Sum_probs=112.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+||+++.++.+||+|||+++........                                          
T Consensus       119 ~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------  156 (258)
T d1k2pa_         119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT------------------------------------------  156 (258)
T ss_dssp             TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC------------------------------------------
T ss_pred             cCcccccccceeEEEcCCCcEEECcchhheeccCCCce------------------------------------------
Confidence            69999999999999999999999999998654332110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+..+.
T Consensus       157 --------------------------~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~  210 (258)
T d1k2pa_         157 --------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET  210 (258)
T ss_dssp             --------------------------CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH
T ss_pred             --------------------------eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH
Confidence                                      0012368899999999999999999999999999999998 8999999998887


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ..++.. ....+.+..++.++.+||.+||+.||++|||    +++++.|
T Consensus       211 ~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt----~~eil~~  254 (258)
T d1k2pa_         211 AEHIAQ-GLRLYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN  254 (258)
T ss_dssp             HHHHHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHh-CCCCCCcccccHHHHHHHHHHccCCHhHCcC----HHHHHHH
Confidence            777655 4455667789999999999999999999999    6666654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.2e-31  Score=222.49  Aligned_cols=136  Identities=20%  Similarity=0.298  Sum_probs=109.8

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.........                                         
T Consensus       130 ~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~-----------------------------------------  168 (317)
T d1xkka_         130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY-----------------------------------------  168 (317)
T ss_dssp             TTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-------------------------------------------
T ss_pred             cCcccCcchhhcceeCCCCCeEeeccccceecccccccc-----------------------------------------
Confidence            689999999999999999999999999986543221100                                         


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||+| |..||.+.+..+.
T Consensus       169 --------------------------~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~  222 (317)
T d1xkka_         169 --------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  222 (317)
T ss_dssp             --------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGH
T ss_pred             --------------------------cccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                      0112358999999999999999999999999999999998 8999988876665


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ... +......+.+..++.++.+||.+||+.||++|||    +.+++.|
T Consensus       223 ~~~-i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~eil~~  266 (317)
T d1xkka_         223 SSI-LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE  266 (317)
T ss_dssp             HHH-HHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHH-HHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcC----HHHHHHH
Confidence            544 4455556677789999999999999999999999    7777766

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-30  Score=214.82  Aligned_cols=141  Identities=27%  Similarity=0.419  Sum_probs=109.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||.++.......                                           
T Consensus       120 ~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------  156 (292)
T d1unla_         120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-------------------------------------------  156 (292)
T ss_dssp             TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-------------------------------------------
T ss_pred             CCEeeecccCcccccccCCceeeeecchhhcccCCCc-------------------------------------------
Confidence            6999999999999999999999999998855432211                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC-CCchhHHHHHHHHHHHHHhCCCCCCC-CChHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG-HGSPVDWWTLGIFLFELFYGVTPFRG-VDHEL  159 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~vl~elltg~~pf~~-~~~~~  159 (250)
                                                ......++..|+|||++.+.. ++.++||||+||++|+|++|..||.. .+..+
T Consensus       157 --------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~  210 (292)
T d1unla_         157 --------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD  210 (292)
T ss_dssp             --------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH
T ss_pred             --------------------------cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHH
Confidence                                      001124678899999988765 69999999999999999999998654 44444


Q ss_pred             HHHHHHHhccCCC---------------------------CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCC
Q 025601          160 TLANIVARALEFP---------------------------KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFF  212 (250)
Q Consensus       160 ~~~~i~~~~~~~p---------------------------~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~  212 (250)
                      .+..+........                           ....+++.+.+||.+||+.||++|||    |+|+|+||||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s----a~e~L~Hp~f  286 (292)
T d1unla_         211 QLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYF  286 (292)
T ss_dssp             HHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGG
T ss_pred             HHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcC----HHHHhcChhh
Confidence            5555443322211                           11346788999999999999999999    9999999999


Q ss_pred             CCC
Q 025601          213 QGV  215 (250)
Q Consensus       213 ~~~  215 (250)
                      ++.
T Consensus       287 ~~~  289 (292)
T d1unla_         287 SDF  289 (292)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            873

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.3e-30  Score=215.42  Aligned_cols=138  Identities=27%  Similarity=0.499  Sum_probs=105.9

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++..+++|||.++.........                                        
T Consensus       129 ~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~----------------------------------------  168 (277)
T d1o6ya_         129 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV----------------------------------------  168 (277)
T ss_dssp             HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------------------------------------
T ss_pred             hCCccCccccCcccccCccccceeehhhhhhhhccccccc----------------------------------------
Confidence            3699999999999999999999999999875443221110                                        


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHELT  160 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~~  160 (250)
                                                ......+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+..+.
T Consensus       169 --------------------------~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~  222 (277)
T d1o6ya_         169 --------------------------TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV  222 (277)
T ss_dssp             ------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             --------------------------cccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH
Confidence                                      011134799999999999998899999999999999999999999999988888


Q ss_pred             HHHHHHhccCCC--CCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFP--KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p--~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +.+++......+  ....+|+++.+||.+||++||++||++   +++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~s---a~~l~  268 (277)
T d1o6ya_         223 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQT---AAEMR  268 (277)
T ss_dssp             HHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSS---HHHHH
T ss_pred             HHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhH---HHHHH
Confidence            888877654433  235789999999999999999999941   55554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6e-31  Score=217.03  Aligned_cols=135  Identities=30%  Similarity=0.478  Sum_probs=104.2

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.++.+||+|||+++........                                          
T Consensus       127 ~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~------------------------------------------  164 (273)
T d1mp8a_         127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY------------------------------------------  164 (273)
T ss_dssp             TTCCCSCCSGGGEEEEETTEEEECC-------------------------------------------------------
T ss_pred             cCeeccccchhheeecCCCcEEEccchhheeccCCcce------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.
T Consensus       165 --------------------------~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~  218 (273)
T d1mp8a_         165 --------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV  218 (273)
T ss_dssp             --------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             --------------------------eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence                                      0011257899999999999999999999999999999997 8999999888877


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ..++..+ ...+.+..+|+++.+||.+||..||++|||    +++++.+
T Consensus       219 ~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~dp~~Rps----~~ei~~~  262 (273)
T d1mp8a_         219 IGRIENG-ERLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKAQ  262 (273)
T ss_dssp             HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence            7776654 344666789999999999999999999999    7777654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.2e-31  Score=216.55  Aligned_cols=137  Identities=22%  Similarity=0.355  Sum_probs=114.0

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++||+||||||+||+++.++.+||+|||+++..........                                       
T Consensus       129 ~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~---------------------------------------  169 (273)
T d1u46a_         129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV---------------------------------------  169 (273)
T ss_dssp             HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEE---------------------------------------
T ss_pred             hCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcce---------------------------------------
Confidence            36899999999999999999999999999866543321100                                       


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                 ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus       170 ---------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~  222 (273)
T d1u46a_         170 ---------------------------MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ  222 (273)
T ss_dssp             ---------------------------C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---------------------------ecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH
Confidence                                       0011246789999999999889999999999999999998 899999999999


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      ...++.......+.+..+|..+.+||.+||+.||++|||    +.+++
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt----~~ei~  266 (273)
T d1u46a_         223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALR  266 (273)
T ss_dssp             HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence            888888877777777889999999999999999999999    55553

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=4.4e-30  Score=214.70  Aligned_cols=133  Identities=21%  Similarity=0.255  Sum_probs=107.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++.+......                                         
T Consensus       158 ~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~-----------------------------------------  196 (301)
T d1lufa_         158 ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-----------------------------------------  196 (301)
T ss_dssp             HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-----------------------------------------
T ss_pred             cCCeEeeEEcccceEECCCCcEEEccchhheeccCCccc-----------------------------------------
Confidence            368999999999999999999999999998543221100                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV-TPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~-~pf~~~~~~~  159 (250)
                                                .......+|+.|+|||++.+..++.++|||||||++|||++|. .||.+.+..+
T Consensus       197 --------------------------~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         197 --------------------------KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             --------------------------C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             --------------------------cccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH
Confidence                                      0111235889999999999999999999999999999999985 6788888887


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCcc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTK  201 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~  201 (250)
                      ....+.++. ..+.+..+++++.+||.+||+.||++|||+.+
T Consensus       251 ~~~~v~~~~-~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~e  291 (301)
T d1lufa_         251 VIYYVRDGN-ILACPENCPLELYNLMRLCWSKLPADRPSFCS  291 (301)
T ss_dssp             HHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HHHHHHcCC-CCCCCccchHHHHHHHHHHcCCChhHCcCHHH
Confidence            777766544 44556689999999999999999999999433

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=212.73  Aligned_cols=147  Identities=21%  Similarity=0.306  Sum_probs=116.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      ++|+||||||+|||++.++.+||+|||+++........                                          
T Consensus       152 ~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~------------------------------------------  189 (308)
T d1p4oa_         152 NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------------  189 (308)
T ss_dssp             TTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE------------------------------------------
T ss_pred             CCeeeceEcCCceeecCCceEEEeecccceeccCCcce------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYG-VTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg-~~pf~~~~~~~~  160 (250)
                                               .......+|+.|+|||++.+..++.++|||||||++|||++| ..||.+.+..+.
T Consensus       190 -------------------------~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~  244 (308)
T d1p4oa_         190 -------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV  244 (308)
T ss_dssp             -------------------------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred             -------------------------eeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     011123689999999999999999999999999999999998 588888888888


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc--CCCCCCCC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH--HPFFQGVN  216 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~--hp~~~~~~  216 (250)
                      +..+.++. ..+.+..++..+.+||.+||+.+|++|||+.+.++.|..  +|+|++++
T Consensus       245 ~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~~  301 (308)
T d1p4oa_         245 LRFVMEGG-LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS  301 (308)
T ss_dssp             HHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHC
T ss_pred             HHHHHhCC-CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcCCC
Confidence            77776544 455567899999999999999999999994443333322  67776543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=8.7e-30  Score=217.71  Aligned_cols=139  Identities=27%  Similarity=0.450  Sum_probs=103.6

Q ss_pred             ccceeecCCCCcEEeCCCC------CeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            2 LGIVYRDLKPENVLVRSDG------HIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~------~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      +||+||||||+|||++.++      .++++|||.+......                                       
T Consensus       145 ~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~---------------------------------------  185 (362)
T d1q8ya_         145 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH---------------------------------------  185 (362)
T ss_dssp             TCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC---------------------------------------
T ss_pred             cCcccccCChhHeeeeccCcccccceeeEeecccccccccc---------------------------------------
Confidence            7899999999999998654      3899999987432211                                       


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                       ....+||+.|+|||++.+..++.++||||+||++++|++|+.||.+.
T Consensus       186 ---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~  232 (362)
T d1q8ya_         186 ---------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD  232 (362)
T ss_dssp             ---------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ---------------------------------cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCC
Confidence                                             01236899999999999999999999999999999999999999754


Q ss_pred             Ch------HHHHHHHHHhccCC----------------------------------------CCCCCCChHHHHHHHHhc
Q 025601          156 DH------ELTLANIVARALEF----------------------------------------PKEPAVPATAKDLISQLL  189 (250)
Q Consensus       156 ~~------~~~~~~i~~~~~~~----------------------------------------p~~~~~~~~~~~ll~~~L  189 (250)
                      ..      ...+..++...+..                                        ......++++.+||.+||
T Consensus       233 ~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL  312 (362)
T d1q8ya_         233 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML  312 (362)
T ss_dssp             ------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG
T ss_pred             ccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHC
Confidence            32      22222222211110                                        001123567899999999


Q ss_pred             ccCccccCCCccChHHHhcCCCCCCCC
Q 025601          190 AKDPERRLGSTKGASAIKHHPFFQGVN  216 (250)
Q Consensus       190 ~~dP~~R~t~~~~a~~ll~hp~~~~~~  216 (250)
                      .+||.+|||    |+|+|+||||+++.
T Consensus       313 ~~dP~~Rpt----a~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         313 QLDPRKRAD----AGGLVNHPWLKDTL  335 (362)
T ss_dssp             CSSTTTCBC----HHHHHTCGGGTTCT
T ss_pred             CCChhHCcC----HHHHhcCcccCCCC
Confidence            999999999    99999999999765

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1e-30  Score=218.21  Aligned_cols=149  Identities=17%  Similarity=0.256  Sum_probs=105.8

Q ss_pred             ccceeecCCCCcEEeCC---CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCC
Q 025601            2 LGIVYRDLKPENVLVRS---DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPA   78 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~---~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (250)
                      +|||||||||+|||++.   +..+||+|||+++...........                                    
T Consensus       122 ~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~------------------------------------  165 (299)
T d1ckia_         122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI------------------------------------  165 (299)
T ss_dssp             TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBC------------------------------------
T ss_pred             CCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccce------------------------------------
Confidence            69999999999999864   457999999998765432211000                                    


Q ss_pred             ccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q 025601           79 VSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHE  158 (250)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~  158 (250)
                                                .........||+.|+|||++.+..++.++|||||||++|||++|..||.+....
T Consensus       166 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~  219 (299)
T d1ckia_         166 --------------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA  219 (299)
T ss_dssp             --------------------------CCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC--
T ss_pred             --------------------------eccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchH
Confidence                                      000112357999999999999999999999999999999999999999876644


Q ss_pred             HHHHHHH---HhccCCC---CCCCCChHHHHHHHHhcccCccccCCCccChHHHhcCCCCC
Q 025601          159 LTLANIV---ARALEFP---KEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHHPFFQ  213 (250)
Q Consensus       159 ~~~~~i~---~~~~~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~hp~~~  213 (250)
                      .....+.   ......+   ....+|+++.+||.+||+.+|++||++.+ +.++|+|+|.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~-i~~~l~~~~~~  279 (299)
T d1ckia_         220 TKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY-LRQLFRNLFHR  279 (299)
T ss_dssp             -----HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHH-HHHHHHHHHHH
Confidence            4332221   1111111   12468999999999999999999999544 44667776543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-29  Score=212.40  Aligned_cols=138  Identities=16%  Similarity=0.213  Sum_probs=105.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +||+||||||+|||++.++.+||+|||+++..........                                        
T Consensus       149 ~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~----------------------------------------  188 (311)
T d1r0pa_         149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------------------------------------  188 (311)
T ss_dssp             TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT----------------------------------------
T ss_pred             cCcccCCccHHhEeECCCCCEEEecccchhhccccccccc----------------------------------------
Confidence            6899999999999999999999999999876543221100                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-H
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGVDHEL-T  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~~~~~-~  160 (250)
                                               .......||+.|+|||++.+..++.++|||||||++|||++|..||....... .
T Consensus       189 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~  243 (311)
T d1r0pa_         189 -------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  243 (311)
T ss_dssp             -------------------------TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------C
T ss_pred             -------------------------eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                     00112358899999999998889999999999999999999888876544333 3


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+. .....+.+..+++++.+||.+||+.||++||+    +.+++.|
T Consensus       244 ~~~i~-~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs----~~ei~~~  287 (311)
T d1r0pa_         244 TVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPS----FSELVSR  287 (311)
T ss_dssp             HHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHH-cCCCCCCcccCcHHHHHHHHHHcCCCHhHCcC----HHHHHHH
Confidence            44443 33455666789999999999999999999999    6666655

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.9e-29  Score=209.53  Aligned_cols=136  Identities=21%  Similarity=0.301  Sum_probs=111.1

Q ss_pred             CccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCcc
Q 025601            1 MLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVS   80 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (250)
                      ++|||||||||+|||++.++.+||+|||+++........                                         
T Consensus       153 ~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~-----------------------------------------  191 (299)
T d1fgka_         153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-----------------------------------------  191 (299)
T ss_dssp             HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT-----------------------------------------
T ss_pred             hCCEEeeeecccceeecCCCCeEeccchhhccccccccc-----------------------------------------
Confidence            368999999999999999999999999998554322110                                         


Q ss_pred             ccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH
Q 025601           81 CFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHEL  159 (250)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~  159 (250)
                                                .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+...
T Consensus       192 --------------------------~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~  245 (299)
T d1fgka_         192 --------------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  245 (299)
T ss_dssp             --------------------------CCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             --------------------------cccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH
Confidence                                      01113468899999999999999999999999999999998 788998887766


Q ss_pred             HHHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          160 TLANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       160 ~~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ....+ ......+.+..+++++.+||.+||+.||++|||    ++++++
T Consensus       246 ~~~~i-~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps----~~eil~  289 (299)
T d1fgka_         246 LFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVE  289 (299)
T ss_dssp             HHHHH-HTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHH-HcCCCCCCCccchHHHHHHHHHHccCCHhHCcC----HHHHHH
Confidence            65544 455566777789999999999999999999999    666654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.1e-29  Score=208.62  Aligned_cols=135  Identities=23%  Similarity=0.370  Sum_probs=113.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.++.+|++|||+++........                                          
T Consensus       164 ~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~------------------------------------------  201 (311)
T d1t46a_         164 KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY------------------------------------------  201 (311)
T ss_dssp             TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS------------------------------------------
T ss_pred             CCeeecccccccccccccCcccccccchheeccCCCcc------------------------------------------
Confidence            68999999999999999999999999998654322110                                          


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                               .......||+.|+|||++.+..++.++|||||||++|||++ |..+|.+......
T Consensus       202 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~  256 (311)
T d1t46a_         202 -------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (311)
T ss_dssp             -------------------------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             -------------------------eEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                     01112468999999999998889999999999999999998 6777778777777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHh
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIK  207 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll  207 (250)
                      +.+++........+..++..+.+||.+||+.||++|||    +++++
T Consensus       257 ~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs----~~~il  299 (311)
T d1t46a_         257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIV  299 (311)
T ss_dssp             HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred             HHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcC----HHHHH
Confidence            77888887777777789999999999999999999999    66655

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.2e-29  Score=210.16  Aligned_cols=133  Identities=20%  Similarity=0.225  Sum_probs=108.1

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++.......                                           
T Consensus       146 ~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~-------------------------------------------  182 (309)
T d1fvra_         146 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-------------------------------------------  182 (309)
T ss_dssp             TTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECC-------------------------------------------
T ss_pred             CCccccccccceEEEcCCCceEEcccccccccccccc-------------------------------------------
Confidence            6899999999999999999999999999854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCC-CCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGV-TPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~-~pf~~~~~~~~  160 (250)
                                                 .....||..|+|||.+.+..++.++|||||||++|||++|. .||.+.+..+.
T Consensus       183 ---------------------------~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~  235 (309)
T d1fvra_         183 ---------------------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL  235 (309)
T ss_dssp             ---------------------------C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             ---------------------------ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHH
Confidence                                       01235889999999999988999999999999999999965 57888777776


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhcC
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKHH  209 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~h  209 (250)
                      ...+.. ....+.+..+++++.+||.+||+.||++|||    +++++.+
T Consensus       236 ~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs----~~eil~~  279 (309)
T d1fvra_         236 YEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS  279 (309)
T ss_dssp             HHHGGG-TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred             HHHHHh-cCCCCCCccCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence            666544 3455566789999999999999999999999    7777765

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=3.8e-28  Score=202.08  Aligned_cols=137  Identities=19%  Similarity=0.284  Sum_probs=102.0

Q ss_pred             CccceeecCCCCcEEeCC-----CCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCC
Q 025601            1 MLGIVYRDLKPENVLVRS-----DGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCI   75 (250)
Q Consensus         1 ~~giiHrDIKp~Nill~~-----~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (250)
                      ++|||||||||+|||++.     ++.+||+|||+++...........                                 
T Consensus       119 ~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~---------------------------------  165 (293)
T d1csna_         119 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI---------------------------------  165 (293)
T ss_dssp             TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC---------------------------------
T ss_pred             HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccce---------------------------------
Confidence            479999999999999974     578999999999765433211100                                 


Q ss_pred             CCCccccCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           76 VPAVSCFRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                                   .......++||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       166 -----------------------------~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~  216 (293)
T d1csna_         166 -----------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  216 (293)
T ss_dssp             -----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             -----------------------------eecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCc
Confidence                                         001122457999999999999999999999999999999999999999865


Q ss_pred             C---hHHHHHHHHHhccCCC---CCCCCChHHHHHHHHhcccCccccCCC
Q 025601          156 D---HELTLANIVARALEFP---KEPAVPATAKDLISQLLAKDPERRLGS  199 (250)
Q Consensus       156 ~---~~~~~~~i~~~~~~~p---~~~~~~~~~~~ll~~~L~~dP~~R~t~  199 (250)
                      .   ......++.......+   ....+|+++.+|+..|+..+|++||+.
T Consensus       217 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y  266 (293)
T d1csna_         217 KAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDY  266 (293)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCH
T ss_pred             cchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence            4   2233333332221111   124689999999999999999999983

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.8e-28  Score=200.91  Aligned_cols=130  Identities=20%  Similarity=0.365  Sum_probs=104.0

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+||+++.++.+||+|||+++.......                                           
T Consensus       122 ~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~-------------------------------------------  158 (262)
T d1byga_         122 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-------------------------------------------  158 (262)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred             CceeccccchHhheecCCCCEeecccccceecCCCCc-------------------------------------------
Confidence            6899999999999999999999999998854322110                                           


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFLFELFY-GVTPFRGVDHELT  160 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~vl~ellt-g~~pf~~~~~~~~  160 (250)
                                                   ...+|..|+|||++.+..++.++|||||||++|||++ |..||...+..+.
T Consensus       159 -----------------------------~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~  209 (262)
T d1byga_         159 -----------------------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV  209 (262)
T ss_dssp             --------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH
T ss_pred             -----------------------------cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH
Confidence                                         1247889999999998889999999999999999998 7888888877777


Q ss_pred             HHHHHHhccCCCCCCCCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          161 LANIVARALEFPKEPAVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       161 ~~~i~~~~~~~p~~~~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      ...+.. ....+.+..+++++.+||.+||..||++|||    +.++++
T Consensus       210 ~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps----~~~l~~  252 (262)
T d1byga_         210 VPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS----FLQLRE  252 (262)
T ss_dssp             HHHHTT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred             HHHHHc-CCCCCCCccCCHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence            666544 4455666789999999999999999999999    655544

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8e-28  Score=201.01  Aligned_cols=138  Identities=21%  Similarity=0.313  Sum_probs=94.5

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCCCcchhhhhccCCCchhhcccccccCCCCccCCccccCCCCCCCccc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSASNAQIISDQNPPIAVLQNEYLVDHPPFTSASCIIPNCIVPAVSC   81 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (250)
                      +|||||||||+|||++.++.+||+|||+++..........                                        
T Consensus       127 ~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~----------------------------------------  166 (303)
T d1vjya_         127 PAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----------------------------------------  166 (303)
T ss_dssp             CEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEC----------------------------------------
T ss_pred             CCeeccccCccceEEcCCCCeEEEecCccccccCCCccee----------------------------------------
Confidence            5999999999999999999999999999865432211000                                        


Q ss_pred             cCccccccccCCCCCCCCccccccccccCCcccCCCCCCCceecCCC------CCchhHHHHHHHHHHHHHhCCCCCCCC
Q 025601           82 FRPKRKRKKKTGQHSGPEFVVEPVDVRSMSFVGTHEYLAPEIVSGEG------HGSPVDWWTLGIFLFELFYGVTPFRGV  155 (250)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~vl~elltg~~pf~~~  155 (250)
                                               .......||+.|+|||++.+..      ++.++|||||||++|||++|..||...
T Consensus       167 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~  221 (303)
T d1vjya_         167 -------------------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             -------------------------C----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             -------------------------ccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcc
Confidence                                     0111246999999999987642      577899999999999999998876322


Q ss_pred             C--------------hHHHHHHHHHh-ccCCCCCC-----CCChHHHHHHHHhcccCccccCCCccChHHHhc
Q 025601          156 D--------------HELTLANIVAR-ALEFPKEP-----AVPATAKDLISQLLAKDPERRLGSTKGASAIKH  208 (250)
Q Consensus       156 ~--------------~~~~~~~i~~~-~~~~p~~~-----~~~~~~~~ll~~~L~~dP~~R~t~~~~a~~ll~  208 (250)
                      .              ......+.... ......+.     .....+.+|+.+||+.||++|||    +.+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~ei~~  290 (303)
T d1vjya_         222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT----ALRIKK  290 (303)
T ss_dssp             CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCC----HHHHHH
T ss_pred             cccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcC----HHHHHH
Confidence            1              22223333222 22111111     12245889999999999999999    555543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.75  E-value=3.2e-10  Score=86.74  Aligned_cols=33  Identities=42%  Similarity=0.617  Sum_probs=27.9

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCccCCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDD   35 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~~~~~   35 (250)
                      +||+||||||+|||++.++ ++|+|||++.....
T Consensus       122 ~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~  154 (191)
T d1zara2         122 RGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGE  154 (191)
T ss_dssp             TTEECSCCSTTSEEEETTE-EEECCCTTCEETTS
T ss_pred             CCEEEccCChhheeeeCCC-EEEEECCCcccCCC
Confidence            6999999999999998554 88999999866543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.27  E-value=0.0023  Score=51.17  Aligned_cols=29  Identities=31%  Similarity=0.418  Sum_probs=26.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      .||||+|+.++||+++.++..-+.||+.+
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFA  211 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             cccccCCcchhhhhcccccceeEeccccc
Confidence            58999999999999998887889999976

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.95  E-value=0.019  Score=44.00  Aligned_cols=28  Identities=21%  Similarity=0.192  Sum_probs=24.4

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      .++|+|+.|.||+++.++..-|.||+.+
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEEeeccCcceeecCCceEEEeechhc
Confidence            4899999999999987666779999876

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=92.48  E-value=0.018  Score=43.87  Aligned_cols=28  Identities=14%  Similarity=0.046  Sum_probs=24.6

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCC
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLS   30 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~   30 (250)
                      .+||+|+.|.||+++.++.+-|.||+.+
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence            5899999999999987766789999876

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=88.77  E-value=0.088  Score=43.07  Aligned_cols=29  Identities=10%  Similarity=0.251  Sum_probs=24.5

Q ss_pred             cceeecCCCCcEEeCCCCCeeeccccCCcc
Q 025601            3 GIVYRDLKPENVLVRSDGHIMLTDFDLSLK   32 (250)
Q Consensus         3 giiHrDIKp~Nill~~~~~~kl~dfgl~~~   32 (250)
                      .++|+|+.+.|||++.++ ++|.||..+..
T Consensus       224 ~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             ceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            589999999999997654 89999987644

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=87.98  E-value=0.099  Score=41.48  Aligned_cols=28  Identities=32%  Similarity=0.373  Sum_probs=22.6

Q ss_pred             ccceeecCCCCcEEeCCCCCeeeccccCCc
Q 025601            2 LGIVYRDLKPENVLVRSDGHIMLTDFDLSL   31 (250)
Q Consensus         2 ~giiHrDIKp~Nill~~~~~~kl~dfgl~~   31 (250)
                      .|+||+|+.+.|||++ ++ ..+.||+-+.
T Consensus       192 ~~liHgDlh~~NvL~~-~~-~~~IDFdd~~  219 (325)
T d1zyla1         192 VLRLHGDCHAGNILWR-DG-PMFVDLDDAR  219 (325)
T ss_dssp             CEECCSSCSGGGEEES-SS-EEECCCTTCC
T ss_pred             ceeecCCCCcccEEEe-CC-ceEEechhcc
Confidence            4789999999999996 34 3578998763