Citrus Sinensis ID: 025619

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Protein Sequence
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHcccccccccEEEEEEcccccccHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccccHHHcccccccccccccccccccccccccccccccccccccEEEHHHHHHHcccccccccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccccccccEEEEEccccccccHHHHHcccEEEEEEccccccccccccccccccEEcHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcEEEEEc
Coil and Loop (DISEMBL)
MATELFFFtsipnlpfplikfpkhhqslplfslapptissrfktvssskarpssstVVVHAVQEEvvqtpnsdskvtpassSKLVLVAGGSGGVGQLVVASLLSRNiksrlllrdpekattlfgkqdeetlqvckgdtrnpkdldpaifEGVTHVIcctgttafpsrrwdgdntpekvdWEGVRNLVSALPSSLKRIVLVSSVgvtkfnelpWSIMNLFGVLKYKKMGEdfvqksglpftIISLCIYCIL
Flexible Loop (DISEMBL)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFktvssskarpssstvVVHAVQEEvvqtpnsdskvtpaSSSKLVLVAGGSGGVGQLVVASLLSrniksrlllrdpekattlfgkqdeetlqvckgdtrnpkdldpAIFEGVTHVICCTGttafpsrrwdgdnTPEKVDWEGVRNLVSalpsslkrIVLVSSvgvtkfnelpwSIMNLFGVLKYKKMGEDFVqksglpftiiSLCIYCIL
Low Complexity Region (SEG)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTvvvhavqeevvqTPNSDSKVTPAsssklvlvaggsggvgqlvvasllsRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Disordered region (IsUnstruct)
****LFFFTSIPNLPFPLIKFPKHHQSLPLFSL**************************************************LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP**ATTLF*******LQVCK*******DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCI*
Disordered Region (DISOPRED)
*********SIPNLPFPLIKFPKH************************************************************VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK*******QDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Disordered Region (DISEMBL)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISS******************VHAVQEEV**************SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Disordered Region (DISPRO)
*ATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFK**********SSTVV*HAVQEEVV**************SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYCIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	250	2.2.26 [Sep-21-2011]
Q8H124	280	Uncharacterized protein A	no	no	0.628	0.560	0.360	3e-13
Q8H0U5	641	Protein TIC 62, chloropla	no	no	0.612	0.238	0.32	8e-13
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.64	0.299	0.318	9e-13
O80934	325	Uncharacterized protein A	no	no	0.596	0.458	0.331	4e-12
Q94EG6	253	Uncharacterized protein A	no	no	0.596	0.588	0.285	2e-08
P48279	321	Uncharacterized protein y	N/A	no	0.568	0.442	0.283	3e-06
P51238	319	Uncharacterized protein y	N/A	no	0.564	0.442	0.273	0.0004

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 88/172 (51%), Gaps = 15/172 (8%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD- 137
           A  +K V VAG +G  G+ +V  LLSR    +  +RD EKA T F  +D+ +LQ+ + D 
Sbjct: 43  AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF--KDDPSLQIVRADV 100

Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKR 196
           T  P  L   I +    VIC TG      R      TP KVD  G  NLV A     +++
Sbjct: 101 TEGPDKLAEVIGDDSQAVICATGF-----RPGFDIFTPWKVDNFGTVNLVDACRKQGVEK 155

Query: 197 IVLVSSVGVT-----KFNELPWSIMNLFGV-LKYKKMGEDFVQKSGLPFTII 242
            VLVSS+ V      +     +  +NLFG+ L  K   E +++KSG+ +TI+
Sbjct: 156 FVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIV 207

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score = 74.3 bits (181), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 22/175 (12%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-------------GKQDEET 130
           LV VAG +G VG   V  LL    + R  +R  ++A +L              G Q  E 
Sbjct: 83  LVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEK 142

Query: 131 LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEGVRNLVSA 189
           L++ + D      + PA+    + +ICC G     S +   D T P ++D+   +NLV A
Sbjct: 143 LEIVECDLEKKDSIQPALG-NASVIICCIGA----SEKEISDITGPYRIDYLATKNLVDA 197

Query: 190 LPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFTII 242
             S+ +   +LV+S+G  KF   P +I+NLF GVL +K+  E+ + +SGL + I+
Sbjct: 198 ATSAKVNNFILVTSLGTNKFG-FPAAILNLFWGVLCWKRKAEEALIESGLNYAIV 251

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score = 73.9 bits (180), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 22/182 (12%)

Query: 77  TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF------------- 123
           T +    LV VAG +G VG   V  L+    K R  +R+ +KA  L              
Sbjct: 83  TDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASG 142

Query: 124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
           G +  E L++ + D      +  A+    T VIC  G     S +   D T P ++D+  
Sbjct: 143 GGEAVEKLEIVECDLEKADQIGSALGNAST-VICAIGA----SEKEIFDITGPCRIDYRA 197

Query: 183 VRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFT 240
            +NLV A   + +   +LV+S+G  KF  LP +I+NLF GVL +K+  E+ +  SG+P+T
Sbjct: 198 TKNLVDAATVAKVNHFILVTSLGTNKFG-LPAAILNLFWGVLIWKRKAEEALLASGIPYT 256

Query: 241 II 242
           I+
Sbjct: 257 IV 258

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 72.0 bits (175), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 26/175 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV G  G  GQ+V   L  R+ +  +R L+R  E    + G +DE    V  GD R+  
Sbjct: 79  VLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKING-EDE----VFIGDIRDTA 133

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
            + PA+ EG+  ++  T  +A P  +              +D    PE+VDW G +N + 
Sbjct: 134 SIAPAV-EGIDALVILT--SAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190

Query: 189 ALPSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           A  ++ +K+IVLV S+G T  N    SI N   +L +K+  E ++  SG+P+TII
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA-NILVWKRKAEQYLADSGIPYTII 244

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 26/175 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV G SG  GQ+V   L   + K  ++ L+R  +    + G+ D     V  GD  +  
Sbjct: 7   VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD-----VFIGDITDAD 61

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
            ++PA F+G+  ++  T  +A P  +              ++    PE+VDW G +N + 
Sbjct: 62  SINPA-FQGIDALVILT--SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query: 189 ALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TII
Sbjct: 119 AAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTII 172

Arabidopsis thaliana (taxid: 3702)

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 20/162 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V S L    + R L+R+  KA  L     E   ++  GD   P+ L
Sbjct: 3   ILVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFL----KEWGAKLIWGDLSQPESL 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSV 203
            PA+  G+  VI  T T    SR  D     + VD +G + L+ A  +  +++ +  S +
Sbjct: 59  LPAL-TGI-RVIIDTST----SRPTDPAGVYQ-VDLKGKKALIDAAKAMKIEKFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLC 245
              K++++P        +++ K + E+ +++SGL +TI  LC
Sbjct: 112 NSEKYSQVP--------LMRIKTVTEELLKESGLNYTIFKLC 145

Cyanophora paradoxa (taxid: 2762)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1

 Score = 45.1 bits (105), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 20/161 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V   L      + ++R+  K+  L     E   ++  GD + P+ +
Sbjct: 3   LLVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFL----KEWGAELVYGDLKLPESI 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             + F GVT VI    +T+ PS   D  NT E++D +G   L+ A  ++ ++R +  S +
Sbjct: 59  LQS-FCGVTAVI--DASTSRPS---DPYNT-EQIDLDGKIALIEAAKAAKVQRFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISL 244
              ++ ++P  +MNL      K    +++QKS + +T+ SL
Sbjct: 112 NADQYPKVP--LMNL------KSQVVNYLQKSSISYTVFSL 144

Porphyra purpurea (taxid: 2787)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
225436583	336	PREDICTED: uncharacterized protein At2g3	0.964	0.717	0.727	4e-83
449442565	340	PREDICTED: uncharacterized protein At2g3	0.924	0.679	0.704	3e-82
449518143	340	PREDICTED: uncharacterized protein At2g3	0.924	0.679	0.700	2e-81
224054522	286	predicted protein [Populus trichocarpa]	0.756	0.660	0.840	3e-78
255551331	385	hypothetical protein RCOM_1245600 [Ricin	0.848	0.550	0.700	1e-74
356560673	324	PREDICTED: uncharacterized protein At2g3	0.892	0.688	0.662	3e-74
356504448	334	PREDICTED: uncharacterized protein At5g0	0.92	0.688	0.659	2e-70
293332867	336	uncharacterized protein LOC100381586 [Ze	0.732	0.544	0.770	8e-69
297802876	324	catalytic/ coenzyme binding protein [Ara	0.828	0.638	0.714	9e-69
242035733	337	hypothetical protein SORBIDRAFT_01g03510	0.572	0.424	0.832	7e-68

>gi|225436583|ref|XP_002274972.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic [Vitis vinifera] gi|296083822|emb|CBI24210.3| unnamed protein product [Vitis vinifera]

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 179/246 (72%), Positives = 194/246 (78%), Gaps = 5/246 (2%)

Query: 1   MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVH 60
           MAT L     I   P    K PK+ Q +P+FSL P            S         V H
Sbjct: 1   MATNLQLL-PIHGFPLSSWKCPKYPQRVPVFSLQPLNPPPPPPPSPKSILSSRRRASVAH 59

Query: 61  AVQEEVVQTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116
           AV+EEV+Q+PNSD    SK +P +SSKLVLV GGSGGVGQL+VASLL RNIKSRLLLRDP
Sbjct: 60  AVKEEVIQSPNSDPALDSKTSPPASSKLVLVVGGSGGVGQLIVASLLDRNIKSRLLLRDP 119

Query: 117 EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPE 176
           EKAT+LFGKQDEETLQV KGDTRN +DL+ +IFEGVTHVICCTGTTAFPS+RWDGDNTPE
Sbjct: 120 EKATSLFGKQDEETLQVYKGDTRNLEDLNSSIFEGVTHVICCTGTTAFPSKRWDGDNTPE 179

Query: 177 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG 236
           KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF+  SG
Sbjct: 180 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFLCSSG 239

Query: 237 LPFTII 242
           LPFTII
Sbjct: 240 LPFTII 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442565|ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus]

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/244 (70%), Positives = 198/244 (81%), Gaps = 13/244 (5%)

Query: 8   FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
            + IP+ P P   F K  Q+LPLF+L P   SS F     KT+SS +  PS +   + A+
Sbjct: 9   LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            +EVVQTP+S    DSK  P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65  NQEVVQTPSSKSTRDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           ATTLFG+QDE+ LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 ATTLFGEQDEKLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKK GEDF++ SGLP
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRDSGLP 244

Query: 239 FTII 242
           FTII
Sbjct: 245 FTII 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518143|ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus]

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 171/244 (70%), Positives = 196/244 (80%), Gaps = 13/244 (5%)

Query: 8   FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
            + IP+ P P   F K  Q+LPLF+L P   SS F     KT+SS +  PS +   + A+
Sbjct: 9   LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            +EVVQTP+S    DSK  P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65  NQEVVQTPSSESTHDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           A TLFG+QDE  LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 AATLFGEQDENLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKK GEDF++ SGLP
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRDSGLP 244

Query: 239 FTII 242
           FTII
Sbjct: 245 FTII 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054522|ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|222845560|gb|EEE83107.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 163/194 (84%), Positives = 178/194 (91%), Gaps = 5/194 (2%)

Query: 54  SSTVVVHAVQEEVV-QTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIK 108
           +S +V HAV+EEV+ Q+PNS+    S+ TP SSSKLVLV GGSGGVGQLVVA+LL+RNIK
Sbjct: 2   TSPLVAHAVKEEVIDQSPNSEATLGSETTPPSSSKLVLVVGGSGGVGQLVVAALLNRNIK 61

Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRR 168
           SRLLLRDPEKA  LFGKQDEE +QV KGDTRNP+DLDP++FEGVTHVICCTGTTAFPSRR
Sbjct: 62  SRLLLRDPEKAVALFGKQDEEKMQVYKGDTRNPEDLDPSLFEGVTHVICCTGTTAFPSRR 121

Query: 169 WDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG 228
           WDGDNTPE+ DWEGVRNLVSALPS+LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG
Sbjct: 122 WDGDNTPERTDWEGVRNLVSALPSTLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG 181

Query: 229 EDFVQKSGLPFTII 242
           EDFV KSGLPFTII
Sbjct: 182 EDFVLKSGLPFTII 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551331|ref|XP_002516712.1| hypothetical protein RCOM_1245600 [Ricinus communis] gi|223544207|gb|EEF45731.1| hypothetical protein RCOM_1245600 [Ricinus communis]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/224 (70%), Positives = 181/224 (80%), Gaps = 12/224 (5%)

Query: 1   MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-------KTVSSSKARPS 53
           MA +LFF   IPN P    K  K  Q +PL  L P  ISS +       ++VSSS +  S
Sbjct: 1   MACKLFF-APIPNCPLSHTKLSKFPQRIPLHFLPPFNISSGYYSSSRTVQSVSSSSSSSS 59

Query: 54  SSTVVVHAVQEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKS 109
           SS++VVHA++EEV+Q+PNS    DS  TP SSSKLVLV GGSGGVGQLVVASLL+RNIKS
Sbjct: 60  SSSLVVHALKEEVIQSPNSEATYDSITTPPSSSKLVLVIGGSGGVGQLVVASLLNRNIKS 119

Query: 110 RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
           RLLLR+P KAT LFGKQDEE LQV +GDTRNP DLDP+IF+G+THVICCTGTTAFPSRRW
Sbjct: 120 RLLLREPAKATALFGKQDEEMLQVFEGDTRNPGDLDPSIFKGITHVICCTGTTAFPSRRW 179

Query: 170 DGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
           +GDNTPE+VDWEGVRNL+SA+PS+LKR+VLVSSVGVTKFNELPW
Sbjct: 180 NGDNTPERVDWEGVRNLISAMPSTLKRVVLVSSVGVTKFNELPW 223

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560673|ref|XP_003548614.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Glycine max]

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/234 (66%), Positives = 184/234 (78%), Gaps = 11/234 (4%)

Query: 19  IKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTV------VVHAVQEEVVQTPNS 72
           + F + H S+    +   T  S   ++SSS A   S           +A+ EE V+T +S
Sbjct: 1   MAFAQRHHSVTQRQVLFFTKFSNRVSLSSSLASKRSCNYNCFYAKAQNALNEEAVETKSS 60

Query: 73  ----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
               D++ TP SSSKLVLVAGGSGGVGQLVVASLL +NIKSRL+LR+P+KAT LFG+QD+
Sbjct: 61  ELKKDTQRTP-SSSKLVLVAGGSGGVGQLVVASLLQQNIKSRLILRNPDKATELFGEQDK 119

Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS 188
           E LQV KGDTR   DLDP++FEGVTHVICCTGTTAFPSRRWD DNTPE+VDW GV+NLVS
Sbjct: 120 EKLQVFKGDTRKQGDLDPSMFEGVTHVICCTGTTAFPSRRWDDDNTPERVDWMGVKNLVS 179

Query: 189 ALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           ALPSS+K +VLVSS+GVTKFNELPWSIMNLFGVLKYKKMGEDF+++SG+PFTII
Sbjct: 180 ALPSSVKSVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRRSGIPFTII 233

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504448|ref|XP_003521008.1| PREDICTED: uncharacterized protein At5g02240-like [Glycine max]

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/244 (65%), Positives = 191/244 (78%), Gaps = 14/244 (5%)

Query: 9   TSIPNLPFPLIKFPKHHQSLP----LFSLAPPTISSRFKTVSSSKARPSSS--TVVVHAV 62
           ++ P LP   + FP+ H S+     LF        S   +V+S ++  S      V +A+
Sbjct: 4   STTPTLP---LAFPQRHHSVSHRQVLFFAKFSNKVSLSSSVASKRSCKSKCFYAKVQNAL 60

Query: 63  QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
            EE V+T +S    D++ TP SSSKLVLV GGSGGVGQLVVASLL +NIKSRL+LR+PEK
Sbjct: 61  NEEAVETQSSELEEDTQSTP-SSSKLVLVVGGSGGVGQLVVASLLQQNIKSRLILRNPEK 119

Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
           AT LFG+QD+E LQV KGDTR  +DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 120 ATELFGEQDKEKLQVFKGDTRKQEDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPERV 179

Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP 238
           DW G++NLVSALPSS+KR+VLVSS+GVTKFNELPWSIMNLFGVLKYKKMGEDF++ SGLP
Sbjct: 180 DWVGLKNLVSALPSSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKMGEDFLRNSGLP 239

Query: 239 FTII 242
           FTII
Sbjct: 240 FTII 243

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293332867|ref|NP_001167879.1| uncharacterized protein LOC100381586 [Zea mays] gi|223944601|gb|ACN26384.1| unknown [Zea mays] gi|413955704|gb|AFW88353.1| hypothetical protein ZEAMMB73_697631 [Zea mays]

 Score =  266 bits (679), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 141/183 (77%), Positives = 160/183 (87%)

Query: 60  HAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119
            AVQE+  +   +       +SSKLVLV GG+GGVGQLVVASLLSRNIKSRLLLRDPEKA
Sbjct: 63  QAVQEQPARAEEAGGAGAAEASSKLVLVVGGTGGVGQLVVASLLSRNIKSRLLLRDPEKA 122

Query: 120 TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD 179
           ++LFGKQDE  LQV K DTRNP DLDP +FEGVTHVICCTGTTAFPS+RWDGDNTPE+VD
Sbjct: 123 SSLFGKQDESVLQVYKADTRNPNDLDPQMFEGVTHVICCTGTTAFPSKRWDGDNTPERVD 182

Query: 180 WEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF 239
           W+G+RNLVSALP ++KR+VLVSS+GVTK+NE+PWSIMNLFGVLKYKKMGEDFV  SG+PF
Sbjct: 183 WDGIRNLVSALPQTVKRLVLVSSIGVTKYNEIPWSIMNLFGVLKYKKMGEDFVCNSGIPF 242

Query: 240 TII 242
           TII
Sbjct: 243 TII 245

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802876|ref|XP_002869322.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297315158|gb|EFH45581.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/214 (71%), Positives = 177/214 (82%), Gaps = 7/214 (3%)

Query: 29  PLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVA 88
           PLF+ +P T+ S F  V + +A  SSS   V A  EE V T +       +SSSKLVLV 
Sbjct: 27  PLFT-SPLTLPSSFFLVRN-EASLSSSITPVQAFTEEAVDTSD-----LASSSSKLVLVV 79

Query: 89  GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148
           GG+GGVGQL+VASLL RNI+SRLLLRD +KAT LFGKQDE +LQV KGDTRN +DLDP++
Sbjct: 80  GGTGGVGQLLVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSM 139

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208
           FEGVTHVIC TGTTAFPS+RW+ +NTPEKVDWEGV+NL+SALPSS+KR+VLVSSVGVTK 
Sbjct: 140 FEGVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSSVKRVVLVSSVGVTKS 199

Query: 209 NELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           NELPWSIMNLFGVLKYKKMGEDF++ SGLPFTII
Sbjct: 200 NELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTII 233

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242035733|ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor] gi|241919115|gb|EER92259.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor]

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 119/143 (83%), Positives = 134/143 (93%)

Query: 100 ASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159
           ASLLSRNIKSRLLLRDPEKA++LFGKQD+  LQV K DTRN  DLDP +FEGVTHVICCT
Sbjct: 106 ASLLSRNIKSRLLLRDPEKASSLFGKQDDSVLQVYKADTRNSNDLDPQMFEGVTHVICCT 165

Query: 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLF 219
           GTTAFPS+RWDGDNTPE+VDW+G+RNLVSALP ++KR+VLVSSVGVTK+NE+PWSIMNLF
Sbjct: 166 GTTAFPSKRWDGDNTPERVDWDGIRNLVSALPQTIKRLVLVSSVGVTKYNEIPWSIMNLF 225

Query: 220 GVLKYKKMGEDFVQKSGLPFTII 242
           GVLKYKKMGEDFV+ SG+PFTII
Sbjct: 226 GVLKYKKMGEDFVRNSGIPFTII 248

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	250
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.452	0.176	0.336	1.8e-09
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.492	0.439	0.369	2.5e-08
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.508	0.390	0.333	3.9e-08
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.42	0.415	0.283	0.00018

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 41/122 (33%), Positives = 67/122 (54%)

Query:   124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
             G Q  E L++ + D      + PA+    + +ICC G     S +   D T P ++D+  
Sbjct:   136 GTQPVEKLEIVECDLEKKDSIQPAL-GNASVIICCIGA----SEKEISDITGPYRIDYLA 190

Query:   183 VRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDFVQKSGLPFT 240
              +NLV A  S+ +   +LV+S+G  KF   P +I+NLF GVL +K+  E+ + +SGL + 
Sbjct:   191 TKNLVDAATSAKVNNFILVTSLGTNKFG-FPAAILNLFWGVLCWKRKAEEALIESGLNYA 249

Query:   241 II 242
             I+
Sbjct:   250 IV 251

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 51/138 (36%), Positives = 74/138 (53%)

Query:   113 LRDPEKATTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDG 171
             +RD EKA T F  +D+ +LQ+ + D T  P  L   I +    VIC TG    P   +D 
Sbjct:    77 VRDVEKAKTSF--KDDPSLQIVRADVTEGPDKLAEVIGDDSQAVICATGFR--PG--FD- 129

Query:   172 DNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT--KFNEL--P-WSIMNLFGV-LKY 224
               TP KVD  G  NLV A     +++ VLVSS+ V      ++  P +  +NLFG+ L  
Sbjct:   130 IFTPWKVDNFGTVNLVDACRKQGVEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVA 189

Query:   225 KKMGEDFVQKSGLPFTII 242
             K   E +++KSG+ +TI+
Sbjct:   190 KLQAEKYIKKSGINYTIV 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 49/147 (33%), Positives = 76/147 (51%)

Query:   109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT-----A 163
             +R L+R  E    + G +DE    V  GD R+   + PA+ EG+  ++  T         
Sbjct:   105 ARGLVRTKESKEKING-EDE----VFIGDIRDTASIAPAV-EGIDALVILTSAVPQMKPG 158

Query:   164 F-PSRR------WDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSI 215
             F PS+       +D    PE+VDW G +N + A  ++ +K+IVLV S+G T  N    SI
Sbjct:   159 FDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTNINHPLNSI 218

Query:   216 MNLFGVLKYKKMGEDFVQKSGLPFTII 242
              N   +L +K+  E ++  SG+P+TII
Sbjct:   219 GNA-NILVWKRKAEQYLADSGIPYTII 244

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 34/120 (28%), Positives = 61/120 (50%)

Query:   136 GDTRNPKDLDPAIFEGVTHVICCTGTT-----AF-PSRR------WDGDNTPEKVDWEGV 183
             GD  +   ++PA F+G+  ++  T         F P++       ++    PE+VDW G 
Sbjct:    55 GDITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 113

Query:   184 RNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
             +N + A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TII
Sbjct:   114 KNQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTII 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      250       213   0.00084  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  172 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.38u 0.12s 17.50t   Elapsed:  00:00:00
  Total cpu time:  17.39u 0.12s 17.51t   Elapsed:  00:00:00
  Start:  Fri May 10 18:30:04 2013   End:  Fri May 10 18:30:04 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022236001 SubName- Full=Chromosome chr6 scaffold_25, whole genome shotgun sequence; (347 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	250
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-42
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	6e-23
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-19
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-17
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	3e-15
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-14
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	8e-13
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	4e-11
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-09
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	7e-09
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	7e-09
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-08
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-08
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-08
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	4e-07
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	1e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-06
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	4e-06
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	1e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	3e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-05
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-05
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	6e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	6e-05
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	4e-04
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	4e-04
pfam05368	232	pfam05368, NmrA, NmrA-like family	5e-04
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	5e-04
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	7e-04
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.001
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	0.001
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.001
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	0.004
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.004

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  143 bits (362), Expect = 1e-42
 Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 15/159 (9%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           VLV G +G VG+ VV  LL R  + R L+RDP +A     K +    +V  GD  + + L
Sbjct: 2   VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQA----EKLEAAGAEVVVGDLTDAESL 57

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             A  EG+  VI   G+         G    E VD++G  NL+ A   + +KR VLVSS+
Sbjct: 58  AAA-LEGIDAVISAAGSGG------KGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSI 110

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           G  K +     +  L   L  K+  ED+++ SGL +TI+
Sbjct: 111 GADKPSH---PLEALGPYLDAKRKAEDYLRASGLDYTIV 146

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 91.6 bits (228), Expect = 6e-23
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 26/163 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + V G +G  G+ +V  LL+R  +   L R+P KA           +   + D  +  DL
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-------APGVTPVQKDLFDLADL 53

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
             A+  GV  V+   G                  D +GV++L+ A   + ++RIV+VS+ 
Sbjct: 54  AEAL-AGVDAVVDAFGARPD--------------DSDGVKHLLDAAARAGVRRIVVVSAA 98

Query: 204 GVTKFNE--LPWSIMNLFG-VLKYKKMGEDFVQKSGLPFTIIS 243
           G+ +            LF    + K   E+ ++ SGL +TI+ 
Sbjct: 99  GLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVR 141

Length = 182

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 83.2 bits (206), Expect = 1e-19
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 13/159 (8%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+ G +G +G+ +   LL +  +  LL+R+ ++ +    +       V +GD R+   L
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA----VVEGDLRDLDSL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A  +GV  VI   G         D  +   +VD EG RN++ A   + +K  + +SS+
Sbjct: 57  SDA-VQGVDVVIHLAGA------PRDTRD-FCEVDVEGTRNVLEAAKEAGVKHFIFISSL 108

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           G                 L  K   E  ++++ LP+TI+
Sbjct: 109 GAYGDLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIV 147

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 79.5 bits (196), Expect = 1e-17
 Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 15/177 (8%)

Query: 74  SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQV 133
            +      +K V VAG +G  G+ +V  LL++    +  +RD +KA T      + +LQ+
Sbjct: 9   EEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL--PQDPSLQI 66

Query: 134 CKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-P 191
            + D T     L  AI +    VIC TG      R +D    P KVD  G  NLV A   
Sbjct: 67  VRADVTEGSDKLVEAIGDDSDAVICATGF----RRSFD-PFAPWKVDNFGTVNLVEACRK 121

Query: 192 SSLKRIVLVSSVGVT-----KFNELPWSIMNLFG-VLKYKKMGEDFVQKSGLPFTII 242
           + + R +LVSS+ V      +     +  +NLFG  L  K   E +++KSG+ +TI+
Sbjct: 122 AGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIV 178

Length = 251

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 74.2 bits (182), Expect = 3e-15
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 31/251 (12%)

Query: 9   TSIPNLPFP---LIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEE 65
           T+IP        + K   H Q L     +    S + +++   KA+ S +T    A  E 
Sbjct: 12  TTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDI-KAQASGATKFSSAAIE- 69

Query: 66  VVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-- 123
                 +  K        L  VAG +G VG   V  LL    + R  +R  ++A +L   
Sbjct: 70  ------AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQS 123

Query: 124 ---------GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT 174
                    G Q  E L++ + D   P  + PA+    + VICC G     S +   D T
Sbjct: 124 VKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL-GNASVVICCIGA----SEKEVFDVT 178

Query: 175 -PEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLF-GVLKYKKMGEDF 231
            P ++D+   +NLV A   + +   +LV+S+G  K    P +I+NLF GVL +K+  E+ 
Sbjct: 179 GPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG-FPAAILNLFWGVLCWKRKAEEA 237

Query: 232 VQKSGLPFTII 242
           +  SGLP+TI+
Sbjct: 238 LIASGLPYTIV 248

Length = 576

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 70.3 bits (172), Expect = 3e-14
 Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 21/160 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             +LV G +G VG  VV  LL+R  + R  +R+PE A  L G      ++V  GD R+PK
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-----VEVVLGDLRDPK 55

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
            L     +GV  V+  +G         DG +    V    V     A  + +K  V +S 
Sbjct: 56  SLVAG-AKGVDGVLLISGLL-------DGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSV 107

Query: 203 VGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           +G         S      + + K   E  ++ SG+P+T +
Sbjct: 108 LGA-----DAAS---PSALARAKAAVEAALRSSGIPYTTL 139

Length = 275

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 65.0 bits (159), Expect = 8e-13
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 28/170 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G  +V   L+R  +   L+RDP K        + E L+V +GD  + +D+
Sbjct: 2   IAIIGATGRTGSAIVREALARGHEVTALVRDPAKLP-----AEHEKLKVVQGDVLDLEDV 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A+ EG   VI   GT          D +P  +  EG RN+VSA+  + +KR+++V   
Sbjct: 57  KEAL-EGQDAVISALGT--------RNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107

Query: 204 G----------VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
           G          V      P     L  V +        +++SGL +T + 
Sbjct: 108 GSLDDRPKVTLVLDTLLFP---PALRRVAEDHARMLKVLRESGLDWTAVR 154

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G+ +V   L    + R L+R+  KA+ L     E   ++  GD   P+ L
Sbjct: 3   LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KEWGAELVYGDLSLPETL 58

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
            P+ F+GVT +I    T+     R       +++DW+G   L+ +A  + +KR +  S +
Sbjct: 59  PPS-FKGVTAIID-ASTS-----RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLC 245
              ++  +P  +M L    K     E  ++KSG+P+TI  L 
Sbjct: 112 NAEQYPYIP--LMKL----KSDI--EQKLKKSGIPYTIFRLA 145

Length = 317

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 27/158 (17%)

Query: 86  LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD 145
           LV G +G +G  VV  LL++      L+R+PEKA         + ++V +GD  +P+ L+
Sbjct: 2   LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFA----ADGVEVRQGDYDDPETLE 57

Query: 146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVG 204
            A FEGV  ++  + +          D   +       +N + A   + +K IV +S+ G
Sbjct: 58  RA-FEGVDRLLLISPSDLE-------DRIQQ------HKNFIDAAKQAGVKHIVYLSASG 103

Query: 205 VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
             + +    +  +           E +++ SG+P+TI+
Sbjct: 104 ADEDSPFLLARDHG--------ATEKYLEASGIPYTIL 133

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 28/178 (15%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             VLV G +G VG  VV  LL +  + R+L+R       L G   E    + +GD R+P 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVE----IVEGDLRDPA 56

Query: 143 DLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLV-SALPSSLKRIV 198
            L  A+     + HV       A   R W  D       + EG RNL+ +AL + ++R+V
Sbjct: 57  SLRKAVAGCRALFHV-------AADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVV 109

Query: 199 LVSSVGVTKFNE--------LPWSIMNLFGVLKYKK-MGE----DFVQKSGLPFTIIS 243
             SSV                P S+ ++ G  K  K + E    +   + GLP  I++
Sbjct: 110 YTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVN 167

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 54.9 bits (132), Expect = 7e-09
 Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 25/176 (14%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
             +LV GG+G +G  +V  LL+     R L R  +             ++    D  +  
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL-----DPLLSGVEFVVLDLTDRD 55

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRNLV-SALPSSLKRI 197
            +D         VI      A  S   D + +      +    G  NL+ +A  + +KR 
Sbjct: 56  LVDELAKGVPDAVIHL----AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRF 111

Query: 198 VLVSSVGV-------TKFNE--LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTII 242
           V  SSV V          +E   P   +N +GV K    ++   + +  GLP  I+
Sbjct: 112 VFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVIL 167

Length = 314

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 38/190 (20%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT----TLFGKQDEETLQVCKGD-T 138
           LVLV G +G +   +V  LL    K R  +R   K+      L      + L+    D  
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP--S 192
             P   D A+ +GV +VI       F           E        EG  N++ A     
Sbjct: 61  TAPNAWDEAL-KGVDYVIHVASPFPFT------GPDAEDDVIDPAVEGTLNVLEAAKAAG 113

Query: 193 SLKRIVLVSSV----GVTK------FNELPWSIMNLF---GVLKY---KKMGE----DFV 232
           S+KR+VL SSV      T       F E  W+ + +    G+  Y   K + E    +FV
Sbjct: 114 SVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFV 173

Query: 233 QKSGLPFTII 242
           +++   F +I
Sbjct: 174 KENKPKFELI 183

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 22/171 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G  +V +LL++  + R L+R    A  L G      ++V +GD  +   L
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG----LPVEVVEGDLTDAASL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLV-SALPSSLKRIVLVSS 202
             A  +G   V      T+     W  D     + + EG RN++ +AL + ++R+V  SS
Sbjct: 57  AAA-MKGCDRVFHLAAFTSL----WAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 203 VGV------TKFNE-LPWSIMNLFGV-LKYKKMGEDFV---QKSGLPFTII 242
           +         + +E  PW+         + K + E  V      GL   I+
Sbjct: 112 IAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIV 162

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 17/162 (10%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
            +V V G +G +G+ VV  L  R  +  +  R    A  L    D   +   + D R+ +
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDN-TPEKVDWEGVRNLVS-ALPSSLKRIVLV 200
            +  A+ EG   VI   G      R ++  N + E V  EG   L   A  + ++R++ +
Sbjct: 61  SIRKAL-EGSDVVINLVG------RLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           S++G    +   +        L+ K  GE+ V+++    TI+
Sbjct: 114 SALGADANSPSKY--------LRSKAEGEEAVREAFPEATIV 147

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 43/164 (26%), Positives = 61/164 (37%), Gaps = 22/164 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSR--LLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           K  LV G +G VG+ ++  LL     S+   ++R          K     L     D   
Sbjct: 1   KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVRRKLTFPEAKEK-----LVQIVVDFER 55

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLVS-ALPSSLKRIV 198
             +   A F+      CC GTT    R+  G      KVD + V  L   A  + ++  +
Sbjct: 56  LDEYLEA-FQNPDVGFCCLGTT----RKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFL 110

Query: 199 LVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           LVSS+G            + F  LK K   E  +QK G     I
Sbjct: 111 LVSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTI 146

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 26/167 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNP 141
           +LV G +G  G  VV +LL     K R L RDP    A  L     E    V +GD  +P
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVE----VVQGDLDDP 56

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVS 201
           + L+ A  +GV  V   T         W+     E    +G   + +A  + ++  V  S
Sbjct: 57  ESLEAA-LKGVYGVFLVTDF-------WEAGGEDE--IAQGKNVVDAAKRAGVQHFVF-S 105

Query: 202 SVG-VTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
           SV  V K         +   V       E++++ SGLP TI+    +
Sbjct: 106 SVPDVEKLTLAVPHFDSKAEV-------EEYIRASGLPATILRPAFF 145

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 23/147 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT------LFGKQDEETLQVCKGDT 138
           V V G SG +G  +V  LL R    R  +RDP           L G   +E L++ K D 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEG--AKERLKLFKADL 58

Query: 139 RNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE--GVRNLVSA--LPS 192
            +    D AI   +GV H        A P      D   E ++    G  N++ A     
Sbjct: 59  LDYGSFDAAIDGCDGVFH-------VASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAK 111

Query: 193 SLKRIVLVSSVG--VTKFNELPWSIMN 217
           S+KR+V  SSV   V   N     +++
Sbjct: 112 SVKRVVFTSSVAAVVWNPNRGEGKVVD 138

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 16/136 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEET-LQVCKGDTRN 140
           VLV G SG V   VV  LL R  K R  +RDP   +K   L     +   L++   D  +
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 141 PKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALPS--SLK 195
            +  D  I    GV HV       A P      D N   K    G  N + A  +  S+K
Sbjct: 61  EQSFDEVIKGCAGVFHV-------ATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVK 113

Query: 196 RIVLVSSVGVTKFNEL 211
           R VL SS G     + 
Sbjct: 114 RFVLTSSAGSVLIPKP 129

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS-------RLLLRDPEKATTLFGKQDEETLQVCKGD 137
            LV GGSG +G+ +V  LL R   +            DP              +Q   GD
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDP---------SSSGRVQFHTGD 52

Query: 138 TRNPKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLK 195
             +P+DL+ A   +G   V      TA P      D+   KV+ +G RN++ A     +K
Sbjct: 53  LTDPQDLEKAFNEKGPNVVF----HTASPDHG-SNDDLYYKVNVQGTRNVIEACRKCGVK 107

Query: 196 RIVLVSSVGV 205
           ++V  SS  V
Sbjct: 108 KLVYTSSASV 117

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           + +AG +G +G  +V++LL+       +L R    ++  F       ++V   D  + + 
Sbjct: 2   IAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEF---QPSGVKVVPVDYASHES 58

Query: 144 LDPAIFEGVTHVICCTGTTAFPS 166
           L  A  +GV  VI   G  A   
Sbjct: 59  LV-AALKGVDAVISALGGAAIGD 80

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 23/163 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRN-IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           VLV GGSG  G+ +V  LL R     R   +  P +A + +   +   ++  KGD  +  
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN---IEFLKGDITDRN 58

Query: 143 DLDPAIFEGVTHVICCT--GTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVL 199
           D++ A+  G   V         A P   +       +V+  G +N++ A     +++ V 
Sbjct: 59  DVEQAL-SGADCVFHTAAIVPLAGPRDLYW------EVNVGGTQNVLDACQRCGVQKFVY 111

Query: 200 VSSVGV--------TKFNELPWSIMNLFGVLKYKKMGEDFVQK 234
            SS  V             LP+  ++     + K + E  V +
Sbjct: 112 TSSSSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLE 154

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 21/181 (11%)

Query: 86  LVAGGSGGVGQLVVASLLSRNIKS--RLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           LV GG G +G+ +V  LL        R+  LR   +    F K   + +   +GD  + +
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKL--QVITYIEGDVTDKQ 58

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVLVS 201
           DL  A+ +G   VI                +T  KV+ +G +N++ A + + ++ +V  S
Sbjct: 59  DLRRAL-QGSDVVIHTAA--IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115

Query: 202 SVGVTKFN-----------ELPWSIMNLFGVLKYKKMGEDFVQKS-GLPFTIISLCIYCI 249
           S+ V   N             P+   +     + K + E  V K+ G           C 
Sbjct: 116 SMEVVGPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYTCA 175

Query: 250 L 250
           L
Sbjct: 176 L 176

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 43.3 bits (102), Expect = 6e-05
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 87  VAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLD 145
           V G +G +G  +V  LL R       LRDP K+  L  K  E + L++ + D +     D
Sbjct: 15  VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74

Query: 146 PAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD-------WEGVRNLV-SALPS-SL 194
            A+   +GV HV     +  F     D +N  E V         +G  N++ S L S ++
Sbjct: 75  EAVKGCDGVFHV---AASMEF-DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTV 130

Query: 195 KRIVLVSSV 203
           KR+V  SS+
Sbjct: 131 KRVVFTSSI 139

Length = 353

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 25  HQSLPLFSL--APPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSS 82
           H S  LFSL  A    SS    +++S            +          + S  +     
Sbjct: 1   HLSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKD 60

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE----ETLQVCKGDT 138
             VLV G +G +G+ VV  L+ R      + R+        GK+D        +V  GD 
Sbjct: 61  VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDV 120

Query: 139 RNPKDLDPAIFE---GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRN-LVSALPSSL 194
            +   L   +F     V  V+ C       + R  G     K+D++  +N L +      
Sbjct: 121 TDADSLRKVLFSEGDPVDVVVSCL------ASRTGGVKDSWKIDYQATKNSLDAGREVGA 174

Query: 195 KRIVLVSSVGVTK 207
           K  VL+S++ V K
Sbjct: 175 KHFVLLSAICVQK 187

Length = 390

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 34/156 (21%), Positives = 46/156 (29%), Gaps = 24/156 (15%)

Query: 67  VQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFG 124
                 +    P       L+ GG GG+G LV   L +R  +  L+L  R          
Sbjct: 135 APAAALELAAAPGGLDGTYLITGGLGGLGLLVARWLAARGAR-HLVLLSRRGPAPRAAAR 193

Query: 125 KQDEE----TLQVCKGDTRNPKDLDPAIFE------GVTHVICCTGTTAFPSRRWDGDNT 174
                     + V + D  +P  L  A+         +  VI   G           + T
Sbjct: 194 AALLRAGGARVSVVRCDVTDPAALA-ALLAELAAGGPLAGVIHAAGVLRDALLA---ELT 249

Query: 175 PEKVD------WEGVRNLVSALP-SSLKRIVLVSSV 203
           P            G  NL    P   L   VL SSV
Sbjct: 250 PAAFAAVLAAKVAGALNLHELTPDLPLDFFVLFSSV 285

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
             V G SG +G+ V   L  R    RL+ R   K   L        +++   D  +   +
Sbjct: 2   AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWL------PGVEIVAADAMDASSV 55

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
             A   G   +  C         RW+    P       + N+V+A  ++  ++VL  +V
Sbjct: 56  IAAA-RGADVIYHCANP---AYTRWEELFPPL------MENVVAAAEANGAKLVLPGNV 104

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV GG+G +G  +V  LL    +  +L R     +   G+         +GD  +P  L
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR-----FHEGDLTDPDAL 55

Query: 145 DPAIFEGV--THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
           +  +   V    VI     +      ++      + +  G   L+ A   + +KR V  S
Sbjct: 56  E-RLLAEVQPDAVIHLAAQSGVG-ASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS 113

Query: 202 SVGV 205
           S  V
Sbjct: 114 SSEV 117

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 18/124 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +G +G  V  +LL      R L+R  E+A  L  +  E    V  GD  +P  L
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAE----VVVGDLDDPAVL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW--EGVRNLVSALPSS-LKRIVLVS 201
             A   GV  V         P        T +      +      SAL  + +KR+V +S
Sbjct: 57  AAA-LAGVDAVFFLA-----P-----PAPTADARPGYVQAAEAFASALREAGVKRVVNLS 105

Query: 202 SVGV 205
           SVG 
Sbjct: 106 SVGA 109

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ----VCKGDTRN 140
           V V GG+G +G+ +V  LL    K  +L+R           ++         V +GD   
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 141 PK-DLDPAIF----EGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP 191
           P   L  A        V HVI C  +  F          P +  W    +G  +++    
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCAASYDF--------QAPNEDAWRTNIDGTEHVLELAA 112

Query: 192 SS-LKRIVLVSSVGVTKFNE 210
              ++R   VS+  V    E
Sbjct: 113 RLDIQRFHYVSTAYVAGNRE 132

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 26/167 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKD 143
           +LV G +G  G  VV + L      R L+RDP+            E ++   GD  + + 
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVE---GDLDDHES 57

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL---KRIVLV 200
           L  A  +GV  V   TG         DG    +     GV++ +   PS           
Sbjct: 58  LVEA-LKGVDVVFSVTGFWLSKEIE-DGKKLADAAKEAGVKHFI---PSEFGNDVDRSNG 112

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
               V  F+             K +   E +++  G+P+T +    +
Sbjct: 113 VEPAVPHFDS------------KAEV--ERYIRALGIPYTFVYAGFF 145

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 22/119 (18%)

Query: 90  GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD-PAI 148
           G G +GQ +   LL++  +     R PEK                        DL  P +
Sbjct: 5   GCGYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAA----------DLTQPGL 54

Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGV 205
              V H++        P                G+R L+ AL    +++R++ +SS GV
Sbjct: 55  LADVDHLVISLP----PPAGSYRGGYDP-----GLRALLDALAQLPAVQRVIYLSSTGV 104

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 35/171 (20%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+ GG+  +G+ +V  LL+      +  R   K         E    +  GD  +   L
Sbjct: 3   ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDL-----PEGVEHI-VGDRNDRDAL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG 204
           +  +      V+    T A+         TP +V        + A    +K+ + +SS  
Sbjct: 57  EELLGGEDFDVVV--DTIAY---------TPRQV-----ERALDAFKGRVKQYIFISSAS 100

Query: 205 VTKFNELPW---------SIMNLFGVLKY---KKMGEDFVQKS-GLPFTII 242
           V                   + L     Y   K+  ED + ++   P+TI+
Sbjct: 101 VYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPYTIV 151

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 21/144 (14%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVC 134
             K+V V G SG +   +V  LL R    +  +RDP      E    L G +  E L + 
Sbjct: 3   EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAK--ERLHLF 60

Query: 135 KGDTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVS-- 188
           K +       D  +   EGV H       TA P      D   E +D   +G  N++   
Sbjct: 61  KANLLEEGSFDSVVDGCEGVFH-------TASPFYHDVTDPQAELIDPAVKGTLNVLRSC 113

Query: 189 ALPSSLKRIVLVSSVGVTKFNELP 212
           A   S+KR+V+ SS+    +N  P
Sbjct: 114 AKVPSVKRVVVTSSMAAVAYNGKP 137

Length = 322

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 39.5 bits (92), Expect = 0.001
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 8/135 (5%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDT 138
            K   V GG+G +  L++  LL +       +RDPE   K   L   Q+   L++   D 
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADL 68

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL--PSSLKR 196
            + +  + A   G   V        F S   D +N   K   +GV N++ A     S+KR
Sbjct: 69  TDEESFE-APIAGCDLVFHVATPVNFASE--DPENDMIKPAIQGVHNVLKACAKAKSVKR 125

Query: 197 IVLVSSVGVTKFNEL 211
           ++L SS      N+L
Sbjct: 126 VILTSSAAAVSINKL 140

Length = 338

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +++ GG+G +G+ +   L +   +  +L R P KA    G  +  T             L
Sbjct: 2   IVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAE---GLAEVITWD--------GLSL 50

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVSALPSSLKR-IVLVS 201
            P    G   VI   G      RRW   N  E +    E  R LV A+ ++     VL+S
Sbjct: 51  GPWELPGADAVINLAGEPIA-CRRWTEANKKEILSSRIESTRVLVEAIANAPAPPKVLIS 109

Query: 202 SVGVT 206
           +  V 
Sbjct: 110 ASAVG 114

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 38.2 bits (90), Expect = 0.001
 Identities = 37/144 (25%), Positives = 49/144 (34%), Gaps = 34/144 (23%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLL-----RDPEKATTLFGKQDE--ETLQVCKGD 137
            L+ GG GG+G   +A  L+     RL+L      D   A  L  + +     + V   D
Sbjct: 3   YLITGGLGGLG-RALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 138 TRNPKDLD------PAIFEGVTHVICCTGTTAFPSRRWDG---DNTPE--------KVDW 180
             +   L       PA+   +T VI   G         DG     TPE        K   
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAGVLD------DGVLASLTPERFAAVLAPKAA- 114

Query: 181 EGVRNLVSAL-PSSLKRIVLVSSV 203
            G  NL        L   VL SS+
Sbjct: 115 -GAWNLHELTADLPLDFFVLFSSI 137

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 16/125 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +LV G +GG+G+L+   L +      +   D  +      K     ++  + D R+P   
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPPK-----VEYVRLDIRDPAAA 55

Query: 145 DPAIFEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVLV 200
           D         V+        P   + R         ++ +G +N++ A   + + R+V+ 
Sbjct: 56  DVFREREADAVVHLAFILDPPRDGAERHR-------INVDGTQNVLDACAAAGVPRVVVT 108

Query: 201 SSVGV 205
           SSV V
Sbjct: 109 SSVAV 113

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNP 141
           K+ LV G S G+G  +  +L     +  L LR+PE  A       D E +     D R+P
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPY---DARDP 57

Query: 142 ------KDLDPAIFEGVTHVICCTG 160
                  D     F  +  ++   G
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAG 82

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 9/138 (6%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEET-LQVC 134
            S  + V V G SG +G  +V  LL R    R  +RDP   +K   L       T L + 
Sbjct: 2   GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLW 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS- 193
           K D       D AI  G T V        F S+  D +N   K    G+ +++ A   + 
Sbjct: 62  KADLAVEGSFDDAI-RGCTGVFHVATPMDFESK--DPENEVIKPTVNGMLSIMKACAKAK 118

Query: 194 -LKRIVLVSSVGVTKFNE 210
            ++RIV  SS G     E
Sbjct: 119 TVRRIVFTSSAGTVNVEE 136

Length = 351

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 15/125 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+ GG+G +G+ +   L  R  +  +L R P        +  +           +   L
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKP------WAGEDADSL 54

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVSALPSSLKRI-VLVS 201
                EG   VI   G      +RW  +   E  D   +  R LV A+ ++ ++  V +S
Sbjct: 55  -----EGADAVINLAGEPIA-DKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFIS 108

Query: 202 SVGVT 206
           +  V 
Sbjct: 109 ASAVG 113

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	250
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.96
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.96
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.94
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.93
PRK08339	263	short chain dehydrogenase; Provisional	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.91
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.91
PRK06196	315	oxidoreductase; Provisional	99.91
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.91
PRK07825	273	short chain dehydrogenase; Provisional	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.91
PRK06180	277	short chain dehydrogenase; Provisional	99.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK07063	260	short chain dehydrogenase; Provisional	99.91
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.91
PRK06179	270	short chain dehydrogenase; Provisional	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK05854	313	short chain dehydrogenase; Provisional	99.9
PLN00198	338	anthocyanidin reductase; Provisional	99.9
PLN02650	351	dihydroflavonol-4-reductase	99.9
PRK07024	257	short chain dehydrogenase; Provisional	99.9
PRK05993	277	short chain dehydrogenase; Provisional	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.9
PRK07478	254	short chain dehydrogenase; Provisional	99.9
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.9
PRK05872	296	short chain dehydrogenase; Provisional	99.9
PRK08265	261	short chain dehydrogenase; Provisional	99.9
PLN02253	280	xanthoxin dehydrogenase	99.9
PRK07062	265	short chain dehydrogenase; Provisional	99.9
PLN02214	342	cinnamoyl-CoA reductase	99.9
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK07890	258	short chain dehydrogenase; Provisional	99.9
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.9
PLN02427	386	UDP-apiose/xylose synthase	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
PLN02572	442	UDP-sulfoquinovose synthase	99.89
PRK06197	306	short chain dehydrogenase; Provisional	99.89
PRK08589	272	short chain dehydrogenase; Validated	99.89
PRK08263	275	short chain dehydrogenase; Provisional	99.89
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.89
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.89
PRK05866	293	short chain dehydrogenase; Provisional	99.89
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.89
PRK06139	330	short chain dehydrogenase; Provisional	99.89
PRK05867	253	short chain dehydrogenase; Provisional	99.89
CHL00194	317	ycf39 Ycf39; Provisional	99.89
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.89
PRK07067	257	sorbitol dehydrogenase; Provisional	99.89
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.89
PRK07109	334	short chain dehydrogenase; Provisional	99.89
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.89
PRK09291	257	short chain dehydrogenase; Provisional	99.89
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.89
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.89
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.88
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.88
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.88
PRK08267	260	short chain dehydrogenase; Provisional	99.88
PRK07985	294	oxidoreductase; Provisional	99.88
PRK06138	252	short chain dehydrogenase; Provisional	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.88
PRK06398	258	aldose dehydrogenase; Validated	99.88
PRK08643	256	acetoin reductase; Validated	99.88
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.88
PRK05717	255	oxidoreductase; Validated	99.88
PRK06523	260	short chain dehydrogenase; Provisional	99.88
PRK06128	300	oxidoreductase; Provisional	99.88
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.88
PRK05693	274	short chain dehydrogenase; Provisional	99.88
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.88
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06172	253	short chain dehydrogenase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK08628	258	short chain dehydrogenase; Provisional	99.88
PRK08303	305	short chain dehydrogenase; Provisional	99.88
PRK06101	240	short chain dehydrogenase; Provisional	99.88
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06114	254	short chain dehydrogenase; Provisional	99.88
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK09242	257	tropinone reductase; Provisional	99.88
PRK07035	252	short chain dehydrogenase; Provisional	99.88
PRK10538	248	malonic semialdehyde reductase; Provisional	99.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK06914	280	short chain dehydrogenase; Provisional	99.88
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.88
PRK12747	252	short chain dehydrogenase; Provisional	99.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.88
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.88
PLN02780	320	ketoreductase/ oxidoreductase	99.88
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PLN02583	297	cinnamoyl-CoA reductase	99.88
PRK06841	255	short chain dehydrogenase; Provisional	99.87
PRK06194	287	hypothetical protein; Provisional	99.87
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.87
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.87
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.87
KOG0725	270	consensus Reductases with broad range of substrate	99.87
PRK07454	241	short chain dehydrogenase; Provisional	99.87
KOG1208	314	consensus Dehydrogenases with different specificit	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
PLN02686	367	cinnamoyl-CoA reductase	99.87
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.87
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.87
PRK08251	248	short chain dehydrogenase; Provisional	99.87
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.87
PRK08862	227	short chain dehydrogenase; Provisional	99.87
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.87
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.87
PRK06125	259	short chain dehydrogenase; Provisional	99.87
PRK06500	249	short chain dehydrogenase; Provisional	99.87
PRK06484	520	short chain dehydrogenase; Validated	99.87
PRK07677	252	short chain dehydrogenase; Provisional	99.87
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.87
PRK09072	263	short chain dehydrogenase; Provisional	99.87
PRK07791	286	short chain dehydrogenase; Provisional	99.87
PRK07856	252	short chain dehydrogenase; Provisional	99.87
PRK05650	270	short chain dehydrogenase; Provisional	99.87
PRK07814	263	short chain dehydrogenase; Provisional	99.87
PRK05875	276	short chain dehydrogenase; Provisional	99.87
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK12743	256	oxidoreductase; Provisional	99.87
PRK07576	264	short chain dehydrogenase; Provisional	99.87
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.87
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.87
PRK05599	246	hypothetical protein; Provisional	99.87
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.87
PRK12939	250	short chain dehydrogenase; Provisional	99.86
PRK07102	243	short chain dehydrogenase; Provisional	99.86
PRK07326	237	short chain dehydrogenase; Provisional	99.86
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.86
PRK05855	582	short chain dehydrogenase; Validated	99.86
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.86
PRK06949	258	short chain dehydrogenase; Provisional	99.86
PRK07806	248	short chain dehydrogenase; Provisional	99.86
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.86
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.86
PRK12742	237	oxidoreductase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PRK07775	274	short chain dehydrogenase; Provisional	99.86
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.86
PRK08278	273	short chain dehydrogenase; Provisional	99.86
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.86
PRK06057	255	short chain dehydrogenase; Provisional	99.86
PLN02240	352	UDP-glucose 4-epimerase	99.86
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.86
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.86
PLN02260	668	probable rhamnose biosynthetic enzyme	99.86
PRK07831	262	short chain dehydrogenase; Provisional	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.86
PRK07060	245	short chain dehydrogenase; Provisional	99.86
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK07201	657	short chain dehydrogenase; Provisional	99.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.85
PRK12746	254	short chain dehydrogenase; Provisional	99.85
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.85
PRK12827	249	short chain dehydrogenase; Provisional	99.85
PRK06484	520	short chain dehydrogenase; Validated	99.85
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.85
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK09134	258	short chain dehydrogenase; Provisional	99.85
PRK08226	263	short chain dehydrogenase; Provisional	99.85
PRK06483	236	dihydromonapterin reductase; Provisional	99.85
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06181	263	short chain dehydrogenase; Provisional	99.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06701	290	short chain dehydrogenase; Provisional	99.85
PRK05884	223	short chain dehydrogenase; Provisional	99.85
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.85
PRK07832	272	short chain dehydrogenase; Provisional	99.85
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.85
PRK06940	275	short chain dehydrogenase; Provisional	99.85
PRK12937	245	short chain dehydrogenase; Provisional	99.85
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.85
PRK08703	239	short chain dehydrogenase; Provisional	99.85
PRK09135	249	pteridine reductase; Provisional	99.84
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.84
PLN00015	308	protochlorophyllide reductase	99.84
PRK12744	257	short chain dehydrogenase; Provisional	99.84
PLN02206	442	UDP-glucuronate decarboxylase	99.84
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.84
PRK08177	225	short chain dehydrogenase; Provisional	99.84
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.84
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.84
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.84
PRK12367	245	short chain dehydrogenase; Provisional	99.84
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07023	243	short chain dehydrogenase; Provisional	99.84
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.84
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.83
PRK06123	248	short chain dehydrogenase; Provisional	99.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.83
PRK06198	260	short chain dehydrogenase; Provisional	99.83
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.82
PRK07577	234	short chain dehydrogenase; Provisional	99.82
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.82
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.82
PRK08324	681	short chain dehydrogenase; Validated	99.82
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.82
PRK07069	251	short chain dehydrogenase; Validated	99.82
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.82
PRK07201	657	short chain dehydrogenase; Provisional	99.82
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.81
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.81
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.81
PRK06924	251	short chain dehydrogenase; Provisional	99.81
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.81
PRK08219	227	short chain dehydrogenase; Provisional	99.81
COG1028	251	FabG Dehydrogenases with different specificities (	99.81
PRK07041	230	short chain dehydrogenase; Provisional	99.81
PRK06953	222	short chain dehydrogenase; Provisional	99.81
PRK07578	199	short chain dehydrogenase; Provisional	99.8
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.8
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.8
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.79
PRK05865	854	hypothetical protein; Provisional	99.78
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.78
PLN00016	378	RNA-binding protein; Provisional	99.78
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.78
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.78
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.78
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.78
PLN02996	491	fatty acyl-CoA reductase	99.77
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.77
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.77
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.76
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.75
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.75
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.74
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.73
PLN02503	605	fatty acyl-CoA reductase 2	99.71
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.71
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.71
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.71
PLN02778	298	3,5-epimerase/4-reductase	99.7
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.69
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.68
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.68
PRK12320	699	hypothetical protein; Provisional	99.68
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.64
PRK06720	169	hypothetical protein; Provisional	99.64
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.62
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.59
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.58
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.58
PLN02260	668	probable rhamnose biosynthetic enzyme	99.58
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.56
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.55
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.54
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.51
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.48
COG2910	211	Putative NADH-flavin reductase [General function p	99.45
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.41
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.36
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.33
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.33
PTZ00325	321	malate dehydrogenase; Provisional	99.2
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.19
PRK08309	177	short chain dehydrogenase; Provisional	99.17
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.08
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.97
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.84
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.82
PLN00106	323	malate dehydrogenase	98.81
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.81
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.8
KOG2774	366	consensus NAD dependent epimerase [General functio	98.78
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.73
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.71
PRK09620	229	hypothetical protein; Provisional	98.66
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.65
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.65
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.59
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.51
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.48
PRK14982	340	acyl-ACP reductase; Provisional	98.47
PRK05086	312	malate dehydrogenase; Provisional	98.47
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.31
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.25
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.13
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.12
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	98.01
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.01
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.0
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.98
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.96
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.95
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.95
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.94
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.89
COG3268	382	Uncharacterized conserved protein [Function unknow	97.86
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.84
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.84
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.77
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.77
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.76
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.75
PRK09496	453	trkA potassium transporter peripheral membrane com	97.75
PRK09496	453	trkA potassium transporter peripheral membrane com	97.69
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.65
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.65
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.57
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.55
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.55
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.54
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.52
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.46
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.45
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.44
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.44
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.44
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.43
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.42
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.42
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.39
PRK05442	326	malate dehydrogenase; Provisional	97.38
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.37
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.37
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.37
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.36
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.36
PLN02602	350	lactate dehydrogenase	97.36
PRK10669	558	putative cation:proton antiport protein; Provision	97.33
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.27
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.26
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.26
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.24
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.24
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.22
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.22
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.21
PLN00203	519	glutamyl-tRNA reductase	97.21
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.21
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.2
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.2
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.19
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.18
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.18
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.17
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.14
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.13
PLN02928	347	oxidoreductase family protein	97.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.12
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.1
PRK04148	134	hypothetical protein; Provisional	97.09
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.07
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.07
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.06
PRK06223	307	malate dehydrogenase; Reviewed	97.05
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.03
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.01
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.01
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.0
PTZ00117	319	malate dehydrogenase; Provisional	97.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.99
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.98
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.97
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.96
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.96
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.96
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.93
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.92
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	96.91
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.91
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.86
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.86
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.85
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.84
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.83
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.83
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.83
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.82
PRK08655	437	prephenate dehydrogenase; Provisional	96.81
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.81
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	96.79
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.77
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.76
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.76
PLN02740	381	Alcohol dehydrogenase-like	96.75
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.75
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.74
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.74
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.73
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.72
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.72
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.72
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.71
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.71
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.71
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	96.69
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	96.69
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.68
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.66
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.65
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.65
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.64
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.62
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.61
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.59
PRK06849	389	hypothetical protein; Provisional	96.56
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.56
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.56
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.55
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.55
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	96.54
PLN02827	378	Alcohol dehydrogenase-like	96.53
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.53
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.52
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.51
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.48
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.48
PRK07574	385	formate dehydrogenase; Provisional	96.47
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.46
PRK08328	231	hypothetical protein; Provisional	96.44
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.42
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.41
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.39
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.38
PRK13243	333	glyoxylate reductase; Reviewed	96.38
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.38
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.38
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.37
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.37
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.36
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.35
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.34
PLN03139	386	formate dehydrogenase; Provisional	96.34
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.32
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.3
PRK08223	287	hypothetical protein; Validated	96.3
PRK12480	330	D-lactate dehydrogenase; Provisional	96.27
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.25
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.24
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.23
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.22
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.2
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	96.2
PLN02494	477	adenosylhomocysteinase	96.19
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.18
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.17
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.17
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.16
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	96.15
PRK10537	393	voltage-gated potassium channel; Provisional	96.14
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.14
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.13
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.12
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.1
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.1
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.09
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.06
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.05
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.05
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.02
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.02
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.01
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	96.0
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.99
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	95.96
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.93
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.92

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.96  E-value=7.1e-29  Score=202.60  Aligned_cols=165  Identities=18%  Similarity=0.211  Sum_probs=133.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+.+|+++|||||+|||.+++++|+++|++|++++|+.++++++++++....+..+..|++|.+++++++      ++++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            3467899999999999999999999999999999999999999998875567888999999999977654      7899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.+....   .+.++.+..+++|+.|..+..+++     +++.++||++||+++.    .+++..+.|+.+|+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----~~y~~~~vY~ATK~  158 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----YPYPGGAVYGATKA  158 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----ccCCCCccchhhHH
Confidence            99999999986422   122233456699999988887765     4566799999999988    45666677776665


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                           ...+++++...+||++.|.||.|
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v  186 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLV  186 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCcee
Confidence                 23344566678999999999988

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.96  E-value=2.4e-28  Score=204.47  Aligned_cols=166  Identities=17%  Similarity=0.224  Sum_probs=136.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++++++|||||+|||.++|++|+++|++|++++|+.++++++++++.   +..++++++|++|++++.+..      .
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3578899999999999999999999999999999999999999887664   345788999999999888643      1


Q ss_pred             CCCcEEEEcCcCCCcC---CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~---~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ..+|++|||||...+.   +.+|+..++.+++|+.+...+..++     +++.++||+++|.+++    .|.+....|+.
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~----~p~p~~avY~A  158 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL----IPTPYMAVYSA  158 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc----CCCcchHHHHH
Confidence            3699999999997653   3556666778899999988777765     4677899999999999    44455667776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|+     ...+..+++.+||+|++|+||.+.
T Consensus       159 TKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~  190 (265)
T COG0300         159 TKAFVLSFSEALREELKGTGVKVTAVCPGPTR  190 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Confidence            664     445667888999999999999874

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=2.8e-26  Score=193.46  Aligned_cols=166  Identities=17%  Similarity=0.184  Sum_probs=122.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc----CCCCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++.+|+|+|||||+|||.++|.+|+++|+++++++|+.++++.+.++    ....++.++++|++|.+++++++      
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999998887777665332    22225899999999999998764      


Q ss_pred             hCCCcEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||+......+.   ++....+++|++|+..+.+++    + .+.+|||.+||++++.    +++....|+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~----~~P~~~~Y~  164 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM----PLPFRSIYS  164 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc----CCCcccccc
Confidence            789999999999987322221   122447799999988888765    3 3458999999999984    344444665


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEE-EEecceEE
Q 025619          221 VLKYK-----KMGEDFVQKSGLPFT-IISLCIYC  248 (250)
Q Consensus       221 ~~k~k-----~~~e~~~~~~gi~~~-~vrPg~v~  248 (250)
                      .+|+.     ..+.+++...++.+. +|.||+|-
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~  198 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIIILVSPGPIE  198 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence            44432     122344555553332 79999984

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.93  E-value=4.2e-25  Score=188.72  Aligned_cols=166  Identities=28%  Similarity=0.396  Sum_probs=129.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh--hCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL--FGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~--~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .+++|+||||+|+||++++++|+++||.|+++.|++++.+..  ...++  ..++..+.+|++|+++++++ +.+||+||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a-i~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA-IDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHH-HhCCCEEE
Confidence            568999999999999999999999999999999998874331  22222  34688999999999999987 79999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCcccccC-----------CCCcch-------h
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKFN-----------ELPWSI-------M  216 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~~~-----------~~~~~~-------~  216 (250)
                      |.|....+...+  ++.+..+.++.|+.+++++++  +.++|||++||.++....           +..|+.       .
T Consensus        84 H~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   84 HTASPVDFDLED--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             EeCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            999987653332  334677999999999999995  358999999999887522           122322       2


Q ss_pred             hHHHHHHH--HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKY--KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~--k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|.++|.  ..++-++.++.|++.++|.|+.|+|
T Consensus       162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~G  196 (327)
T KOG1502|consen  162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFG  196 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceEC
Confidence            35776665  3334456778899999999999987

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.4e-25  Score=186.61  Aligned_cols=166  Identities=19%  Similarity=0.159  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh-----hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~-----~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++++|++|++++++++     ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            5788999999999999999999999999999999999887766554331   346788999999999888654     36


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|++|||||......   .+.++....+++|+.++..+++++     +++.++||++||..+..    +.+....|+.+
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~----~~~~~~~y~as  160 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE----PIPNIALSNVV  160 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC----CCCcchhhHHH
Confidence            7999999999754211   122223445688999977777654     24568999999988763    22233455544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++..+||++++|+||++.
T Consensus       161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~  191 (263)
T PRK08339        161 RISMAGLVRTLAKELGPKGITVNGIMPGIIR  191 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence            43     233445666789999999999874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=3.5e-24  Score=196.10  Aligned_cols=166  Identities=28%  Similarity=0.463  Sum_probs=128.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----------CCCeeEEEeeCCCccCcchh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EETLQVCKGDTRNPKDLDPA  147 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----------~~~~~~v~~Dl~d~~~~~~~  147 (250)
                      ..++|+||||||+||||++++++|+++|++|++++|+.++++.+.+.+.           ..+++++.+|++|.++++++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            3578999999999999999999999999999999999988765433211           13578999999999999865


Q ss_pred             hhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       148 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                       ++++|+||||+|.....   +.+....+++|+.|+.+++++++ .+++|||++||.++.............+++..+|+
T Consensus       157 -LggiDiVVn~AG~~~~~---v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kr  232 (576)
T PLN03209        157 -LGNASVVICCIGASEKE---VFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKR  232 (576)
T ss_pred             -hcCCCEEEEcccccccc---ccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHH
Confidence             79999999999875321   11233456889999999999984 57899999999876421100001113345667899


Q ss_pred             HHHHHHHhcCCCEEEEecceEE
Q 025619          227 MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|+++++.||+|++||||++.
T Consensus       233 aaE~~L~~sGIrvTIVRPG~L~  254 (576)
T PLN03209        233 KAEEALIASGLPYTIVRPGGME  254 (576)
T ss_pred             HHHHHHHHcCCCEEEEECCeec
Confidence            9999999999999999999985

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.91  E-value=1.2e-24  Score=186.55  Aligned_cols=160  Identities=27%  Similarity=0.295  Sum_probs=120.1

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCCC
Q 025619           86 LVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTA  163 (250)
Q Consensus        86 lVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~~  163 (250)
                      |||||+|+||++++++|+++|  ++|.++++.+..... .........+++.+|++|.+++.++ +.++|+|||+|+...
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~-~~~~~~~~~~~~~~Di~d~~~l~~a-~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL-KDLQKSGVKEYIQGDITDPESLEEA-LEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc-hhhhcccceeEEEeccccHHHHHHH-hcCCceEEEeCcccc
Confidence            699999999999999999999  789999987654221 0111122334899999999999986 799999999999764


Q ss_pred             cCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCccccc-----------CCCCcchhhHHHHHHHHHHHHHH
Q 025619          164 FPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF-----------NELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       164 ~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~-----------~~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      ...  ....+..+++|+.||+++++++ +.+++|+||+||..++.+           +..+++......|+++|..+|+.
T Consensus        79 ~~~--~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~  156 (280)
T PF01073_consen   79 PWG--DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKA  156 (280)
T ss_pred             ccC--cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHH
Confidence            321  1234557799999999999998 469999999999998764           12222222222466788888877


Q ss_pred             HHh-c--------CCCEEEEecceEEe
Q 025619          232 VQK-S--------GLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~~-~--------gi~~~~vrPg~v~~  249 (250)
                      +.+ .        .+++++|||+.|||
T Consensus       157 V~~a~~~~~~~g~~l~t~~lRP~~IyG  183 (280)
T PF01073_consen  157 VLEANGSELKNGGRLRTCALRPAGIYG  183 (280)
T ss_pred             HHhhcccccccccceeEEEEeccEEeC
Confidence            643 2        28899999999998

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.91  E-value=2.2e-24  Score=190.42  Aligned_cols=167  Identities=15%  Similarity=0.092  Sum_probs=124.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH----hhhhCcC---CCCCeeEEEeeCCCccCcchhhhCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~----~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~~  151 (250)
                      .+++|+||||||+|+||++++++|+++|++|++++|.....    +......   ...+++++.+|++|.+++.++ +++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~-~~~   90 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA-CKN   90 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-hhC
Confidence            35678999999999999999999999999999999864321    1111110   123578899999999888864 688


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------CCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k  223 (250)
                      +|+|||+|+....+ ..+.++...+++|+.|+.+++++++ .+++++|++||..+|+...       .+..|.+.|+.+ 
T Consensus        91 ~d~ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~s-  168 (348)
T PRK15181         91 VDYVLHQAALGSVP-RSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVT-  168 (348)
T ss_pred             CCEEEECccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHH-
Confidence            99999999975432 2223344567899999999999985 5788999999999887321       123345667754 


Q ss_pred             HHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          224 YKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                       |...|..    .++.|++++++||+.+||
T Consensus       169 -K~~~e~~~~~~~~~~~~~~~~lR~~~vyG  197 (348)
T PRK15181        169 -KYVNELYADVFARSYEFNAIGLRYFNVFG  197 (348)
T ss_pred             -HHHHHHHHHHHHHHhCCCEEEEEecceeC
Confidence             5555543    345699999999999997

>PRK06196 oxidoreductase; Provisional

Probab=99.91  E-value=4.7e-24  Score=185.83  Aligned_cols=169  Identities=19%  Similarity=0.170  Sum_probs=121.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+|+||||+||||++++++|+++|++|++++|++++.++..+.+  .++.++++|++|.+++++++      ++++
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI--DGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            467899999999999999999999999999999999988776654433  24788999999999887654      3679


Q ss_pred             cEEEEcCcCCCcCC-CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccC--------CCCcchhhH
Q 025619          153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN--------ELPWSIMNL  218 (250)
Q Consensus       153 D~vi~~Ag~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~--------~~~~~~~~~  218 (250)
                      |+||||||....+. ...+..+..+++|+.|+..+++++     +.+.++||++||.+.....        ..++.+...
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  180 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA  180 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHH
Confidence            99999999764221 111223445689999987777654     2345799999997654211        123334456


Q ss_pred             HHHHHHHH-----HHHHHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKYKK-----MGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k~-----~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|...     .+..++.+.||++++|+||++.+
T Consensus       181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t  216 (315)
T PRK06196        181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILT  216 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccC
Confidence            66554421     12233445799999999999854

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.91  E-value=6.1e-24  Score=185.88  Aligned_cols=159  Identities=23%  Similarity=0.340  Sum_probs=122.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +++|+||||||+|+||++++++|+++|  ++|++++|+..+...+.......+++++.+|++|.+++.++ ++++|+|||
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~-~~~iD~Vih   80 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRA-LRGVDYVVH   80 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHH-HhcCCEEEE
Confidence            467899999999999999999999986  78999999876544433333234688999999999999875 688999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHH----
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV----  232 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~----  232 (250)
                      +||....+... .++...+++|+.|+.++++++. .+.++||++||....       .+.+.|+.  +|...|..+    
T Consensus        81 ~Ag~~~~~~~~-~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-------~p~~~Y~~--sK~~~E~l~~~~~  150 (324)
T TIGR03589        81 AAALKQVPAAE-YNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-------NPINLYGA--TKLASDKLFVAAN  150 (324)
T ss_pred             CcccCCCchhh-cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-------CCCCHHHH--HHHHHHHHHHHHH
Confidence            99976433222 2234567899999999999885 577899999997544       23355664  555565443    


Q ss_pred             ---HhcCCCEEEEecceEEe
Q 025619          233 ---QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ---~~~gi~~~~vrPg~v~~  249 (250)
                         +..|++++++|||.|+|
T Consensus       151 ~~~~~~gi~~~~lR~g~v~G  170 (324)
T TIGR03589       151 NISGSKGTRFSVVRYGNVVG  170 (324)
T ss_pred             hhccccCcEEEEEeecceeC
Confidence               34699999999999986

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.91  E-value=5.4e-24  Score=181.47  Aligned_cols=164  Identities=14%  Similarity=0.100  Sum_probs=122.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++++.+.+.  .++++.+|++|++++++++      ++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999999999999988776554332  5778999999999876543      4689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |++|||||.......   +.+.....+++|+.|+.++++++     +.+.++||++||..+..    +.+....|+.+|.
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  155 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI----PVPGMATYCASKH  155 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC----CCCCCcchHHHHH
Confidence            999999998653211   11112335588999988888765     35678999999988774    2333445654443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           ...++.++++.|+++++|+||++.
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~  184 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVN  184 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCc
Confidence                 123344566789999999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.5e-24  Score=182.59  Aligned_cols=166  Identities=16%  Similarity=0.146  Sum_probs=123.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|.+++++++      ++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999999887766544332  235778999999999887643      46


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||.......   ..+..+..+++|+.|+.++++++     +.+ .++||++||..++.    +.+....|+.
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  158 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV----PNAGLGAYGV  158 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc----CCCCCchHHH
Confidence            79999999998542211   11122345589999999998876     233 57999999998873    3344556776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     ...+..+++..||++++++||++.
T Consensus       159 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  190 (275)
T PRK05876        159 AKYGVVGLAETLAREVTADGIGVSVLCPMVVE  190 (275)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence            554     223334456679999999999874

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=1.6e-23  Score=182.84  Aligned_cols=164  Identities=23%  Similarity=0.322  Sum_probs=119.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh---hCcC-CCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~---~~~~-~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .+|+||||||+|+||++++++|+++|++|+++.|+.++.+..   .... ...+++++.+|++|.++++++ +.++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQA-IEGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHH-HhCCCEEE
Confidence            568999999999999999999999999999999987543322   1110 124688999999999999875 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCcccc--cC----CCCc------c------hh
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTK--FN----ELPW------S------IM  216 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~--~~----~~~~------~------~~  216 (250)
                      |+|+.....  ..++....+++|+.|+.+++++++  .+++|||++||.+++.  ..    ..+.      .      +.
T Consensus        83 h~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  160 (322)
T PLN02986         83 HTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK  160 (322)
T ss_pred             EeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence            999975321  112223456899999999999885  3678999999987642  11    0001      0      12


Q ss_pred             hHHHHHHHHHHHH----HHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKYKKMGE----DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~k~~~e----~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.|+.+|  ..+|    .+.+++|++++++||+.+||
T Consensus       161 ~~Y~~sK--~~aE~~~~~~~~~~~~~~~~lrp~~v~G  195 (322)
T PLN02986        161 NWYPLSK--ILAENAAWEFAKDNGIDMVVLNPGFICG  195 (322)
T ss_pred             cchHHHH--HHHHHHHHHHHHHhCCeEEEEcccceeC
Confidence            4566554  4444    34456799999999999997

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-23  Score=178.77  Aligned_cols=161  Identities=16%  Similarity=0.114  Sum_probs=120.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|+++||||+||||++++++|+++|++|++++|++++++.+.+.. ..++..+.+|++|.+++.+++      ++++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999999998776654432 346788999999999887643      357999


Q ss_pred             EEEcCcCCCcCCCCCCC---CCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPSRRWDG---DNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~---~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      ||||||..........+   ....+++|+.|+.++++++     +.+.++||++||.++..+    .++...|+.+|.  
T Consensus        82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~----~~~~~~Y~~sK~--  155 (277)
T PRK06180         82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT----MPGIGYYCGSKF--  155 (277)
T ss_pred             EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC----CCCcchhHHHHH--
Confidence            99999986432211111   2334689999999999875     245679999999887642    233456665443  


Q ss_pred             HHH-------HHHHhcCCCEEEEecceEE
Q 025619          227 MGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .++       .+++..|+++++++||++.
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  184 (277)
T PRK06180        156 ALEGISESLAKEVAPFGIHVTAVEPGSFR  184 (277)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEecCCcc
Confidence            333       3344579999999999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.2e-23  Score=177.76  Aligned_cols=165  Identities=12%  Similarity=0.112  Sum_probs=118.5

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+. +.++..+++...++.++++|++|++++++++      ++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3678999999999  8999999999999999999999984 3333333332346788999999999888654      57


Q ss_pred             CCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          151 GVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++|+||||||....     +  ..+.++.+..+++|+.++..+++++.   ...++||++||.++..    +.+....|+
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----~~~~~~~Y~  158 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER----AIPNYNVMG  158 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc----cCCcchhhH
Confidence            89999999997531     1  11112234456899999888887662   1237899999987753    223344565


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||+|-
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~  191 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVK  191 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            5443     223334556789999999999884

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.1e-24  Score=179.43  Aligned_cols=166  Identities=16%  Similarity=0.113  Sum_probs=121.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++.    ..++.++++|++|++++++++      
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766554332    345778999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   ...++.+..+++|+.++.++++++     +.+.++||++||..+...    .+....|+
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~  159 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI----IPGCFPYP  159 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC----CCCchHHH
Confidence            468999999999753211   111122345688999999988876     235579999999877632    22334555


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||+++.|+||++-
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~  192 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIE  192 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence            4443     122223445579999999999873

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-23  Score=177.58  Aligned_cols=165  Identities=12%  Similarity=0.061  Sum_probs=118.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++.+|+++||||++|||++++++|+++|++|++++|+... ..+..+.. +.++.++.+|++|++++++++      +++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999886532 22211111 346788999999999988654      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|++|||||......   .+.++.+..+++|+.++..+.+++     +++ .++||++||..++.+.    .....|+.+
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----~~~~~Y~as  159 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG----IRVPSYTAS  159 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC----CCCcchHHH
Confidence            999999999764221   122234556799999998888765     223 4799999998877422    222355544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++..+||++++|+||++-
T Consensus       160 K~a~~~l~~~la~e~~~~girvn~v~PG~v~  190 (251)
T PRK12481        160 KSAVMGLTRALATELSQYNINVNAIAPGYMA  190 (251)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCCc
Confidence            43     222334556689999999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-23  Score=178.85  Aligned_cols=158  Identities=17%  Similarity=0.182  Sum_probs=119.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++++++||||+||||++++++|+++|++|++++|++++.+.      ..+++++++|++|++++++++      ++++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            45789999999999999999999999999999999766543      246789999999999988754      457999


Q ss_pred             EEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       155 vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      ||||||.......   .++..+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+|.. 
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~sK~a~  152 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP----APYMALYAASKHAV  152 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC----CCCccHHHHHHHHH
Confidence            9999998653221   12223456689999999988875     356789999999877642    2333456654432 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          ..+..++++.|+++++++||++.
T Consensus       153 ~~~~~~l~~el~~~gi~v~~v~pg~~~  179 (270)
T PRK06179        153 EGYSESLDHEVRQFGIRVSLVEPAYTK  179 (270)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeCCCcc
Confidence                12234456689999999999875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=9.1e-24  Score=178.28  Aligned_cols=170  Identities=16%  Similarity=0.094  Sum_probs=123.9

Q ss_pred             CCCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh----
Q 025619           75 KVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----  148 (250)
Q Consensus        75 ~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~----  148 (250)
                      |+..++++|++|||||+|+||++++++|+++|++|++++|++++.+++.+.+.  +.++..+++|++|.+++++++    
T Consensus         3 ~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          3 LNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHH
Confidence            44446789999999999999999999999999999999999887665543332  235778999999999888654    


Q ss_pred             --hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 --FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                        ++++|+||||||.......   .++..++.+++|+.++.++++++.     .+.++||++||.....    +.+....
T Consensus        83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~  158 (255)
T PRK07523         83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL----ARPGIAP  158 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc----CCCCCcc
Confidence              3579999999998642211   111123445789999999998772     3568999999987653    2333455


Q ss_pred             HHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|..     +....++.++||++++|+||++.
T Consensus       159 y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~  193 (255)
T PRK07523        159 YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFD  193 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECccc
Confidence            6654431     12223445679999999999875

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.7e-23  Score=181.01  Aligned_cols=169  Identities=17%  Similarity=0.125  Sum_probs=123.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++    ...++.++++|++|.+++++++     
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988766554332    1246788999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC--CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccC--------CCCc
Q 025619          149 -FEGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN--------ELPW  213 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~--~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~--------~~~~  213 (250)
                       ++++|+||||||....+.  ...+..+..+++|+.|+..+++.+    +.+.++||++||..+....        ..++
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~  169 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSY  169 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccC
Confidence             457999999999865322  223344556799999988877765    3455799999998765321        1123


Q ss_pred             chhhHHHHHHHHHHHHH---HH------HhcCCCEEEEecceEE
Q 025619          214 SIMNLFGVLKYKKMGED---FV------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       214 ~~~~~y~~~k~k~~~e~---~~------~~~gi~~~~vrPg~v~  248 (250)
                      .+...|+.+|.  +...   .+      ...||++++++||++.
T Consensus       170 ~~~~~Y~~SK~--a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~  211 (313)
T PRK05854        170 AGMRAYSQSKI--AVGLFALELDRRSRAAGWGITSNLAHPGVAP  211 (313)
T ss_pred             cchhhhHHHHH--HHHHHHHHHHHHhhcCCCCeEEEEEecceec
Confidence            44456665554  3221   12      1358999999999884

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.90  E-value=3.2e-23  Score=182.16  Aligned_cols=165  Identities=20%  Similarity=0.287  Sum_probs=120.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh--CcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF--GKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~--~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+......  ..+. .++++++.+|++|.+++.+. ++++|+||
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi   85 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAP-IAGCDLVF   85 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHH-HhcCCEEE
Confidence            46789999999999999999999999999999988865432211  1111 13578899999999988865 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccCcccccCC----------C----------Ccc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKFNE----------L----------PWS  214 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~~~~~~----------~----------~~~  214 (250)
                      |+|+.....  ..++....+++|+.|+.++++++. . ++++||++||.++++...          .          +..
T Consensus        86 h~A~~~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         86 HVATPVNFA--SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             EeCCCCccC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence            999854211  111222345889999999999884 3 578999999998876311          0          112


Q ss_pred             hhhHHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          215 IMNLFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ~~~~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+.|+  .+|.++|..    .++.|++++++||+.|||
T Consensus       164 p~~~Y~--~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyG  200 (338)
T PLN00198        164 PTWGYP--ASKTLAEKAAWKFAEENNIDLITVIPTLMAG  200 (338)
T ss_pred             ccchhH--HHHHHHHHHHHHHHHhcCceEEEEeCCceEC
Confidence            344566  455555544    345799999999999997

>PLN02650 dihydroflavonol-4-reductase

Probab=99.90  E-value=4e-23  Score=182.44  Aligned_cols=164  Identities=26%  Similarity=0.355  Sum_probs=120.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ..|+||||||+|+||++++++|+++|++|++++|+.++.+.+.....    ..+++++.+|++|.+.++++ +.++|+||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~-~~~~d~Vi   82 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDA-IRGCTGVF   82 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHH-HhCCCEEE
Confidence            35689999999999999999999999999999998765443321111    13578899999999998865 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C-CCeEEEEccCcccccC--CCC------c----------chh
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFN--ELP------W----------SIM  216 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~-~~~iV~iSS~~~~~~~--~~~------~----------~~~  216 (250)
                      |+|+.....  ..++....+++|+.|+.++++++.+ + .++||++||.++++..  ..+      +          .+.
T Consensus        83 H~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         83 HVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            999865321  1122235678999999999999853 4 6899999998765421  111      1          012


Q ss_pred             hHHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      +.|+  .+|...|.+    .+++|++++++||+.+||
T Consensus       161 ~~Y~--~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G  195 (351)
T PLN02650        161 WMYF--VSKTLAEKAAWKYAAENGLDFISIIPTLVVG  195 (351)
T ss_pred             chHH--HHHHHHHHHHHHHHHHcCCeEEEECCCceEC
Confidence            3555  555556544    355799999999999987

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-23  Score=177.39  Aligned_cols=161  Identities=14%  Similarity=0.135  Sum_probs=119.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      +|+++||||+||||++++++|+++|++|++++|+.++++++.+++.. .++.++.+|++|++++.+++      ++.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47999999999999999999999999999999998887766544322 26888999999999887653      356899


Q ss_pred             EEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       155 vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      ||||||......    .+++..+..+++|+.|+.++++++     +.+.++||++||..+..+    .+....|+.+|  
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~asK--  155 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG----LPGAGAYSASK--  155 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC----CCCCcchHHHH--
Confidence            999999754211    111223445689999998887743     345689999999877632    23334555444  


Q ss_pred             HHHH-------HHHHhcCCCEEEEecceEE
Q 025619          226 KMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ...+       .+++..|+++++++||++.
T Consensus       156 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  185 (257)
T PRK07024        156 AAAIKYLESLRVELRPAGVRVVTIAPGYIR  185 (257)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence            3333       3345679999999999874

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.1e-23  Score=176.69  Aligned_cols=158  Identities=18%  Similarity=0.165  Sum_probs=117.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------h-CCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~-~~~D  153 (250)
                      ++|+++||||+||||++++++|+++|++|++++|++++++++.+    .+++++.+|++|.+++++++      + +++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            46899999999999999999999999999999999988776553    35788999999998877643      1 4799


Q ss_pred             EEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHH----HHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNL----VSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l----~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      +||||||........   .+.....+++|+.|+..+    ++.++ .+.++||++||..++.    +......|+.+|  
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK--  152 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV----PMKYRGAYNASK--  152 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC----CCCccchHHHHH--
Confidence            999999976532111   111234568999995554    44443 5678999999987763    334445666544  


Q ss_pred             HHHH-------HHHHhcCCCEEEEecceEE
Q 025619          226 KMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+++       .++++.||++++|+||++-
T Consensus       153 ~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~  182 (277)
T PRK05993        153 FAIEGLSLTLRMELQGSGIHVSLIEPGPIE  182 (277)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence            3333       3456789999999999874

>PRK06182 short chain dehydrogenase; Validated

Probab=99.90  E-value=2.2e-23  Score=177.81  Aligned_cols=159  Identities=18%  Similarity=0.169  Sum_probs=117.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|+++||||+||||++++++|+++|++|++++|++++++++.+    .+++++.+|++|.+++++++      ++++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            46899999999999999999999999999999999988766542    35788999999999887653      358999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHH----c-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----L-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a----~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      ||||||......   .++++.+..+++|+.|+.+++++    + +.+.++||++||..+...    .+....|+.+  |.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~s--Ka  151 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY----TPLGAWYHAT--KF  151 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC----CCCccHhHHH--HH
Confidence            999999864321   12223345668899996666654    3 346689999999876532    1222345544  44


Q ss_pred             HHH-------HHHHhcCCCEEEEecceEEe
Q 025619          227 MGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +++       .+++..||++++++||++.+
T Consensus       152 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  181 (273)
T PRK06182        152 ALEGFSDALRLEVAPFGIDVVVIEPGGIKT  181 (273)
T ss_pred             HHHHHHHHHHHHhcccCCEEEEEecCCccc
Confidence            443       33456799999999998853

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.4e-23  Score=177.14  Aligned_cols=167  Identities=13%  Similarity=0.096  Sum_probs=120.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+||||.+++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999888776544332  346788999999999887654      45


Q ss_pred             CCcEEEEcCcCCCc--CC--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||....  +.  ...++....+++|+.++..+++++     +.+.++||++||..++..   +.+....|+.
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~---~~~~~~~Y~~  159 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA---GFPGMAAYAA  159 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc---CCCCcchhHH
Confidence            89999999997531  11  111223445689999988876654     345678999999877531   1223345665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     +.+..++...||++++|+||++-
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  191 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTD  191 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCccc
Confidence            5431     12223445578999999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=3.1e-23  Score=181.15  Aligned_cols=165  Identities=20%  Similarity=0.253  Sum_probs=121.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC---cCC-CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~---~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .+|+||||||+||||++++++|+++|++|++++|+.++.+....   ... ..+++++.+|++|.++++++ ++++|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELA-IDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHH-HcCCCEEE
Confidence            46899999999999999999999999999999988764432211   101 24688899999999999875 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC--CCCeEEEEccCcccccC------------CCCcch------h
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN------------ELPWSI------M  216 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~iV~iSS~~~~~~~------------~~~~~~------~  216 (250)
                      ||||.... ....++....+++|+.|+.++++++.+  +.++||++||..+++..            +.+..+      .
T Consensus        83 h~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  161 (325)
T PLN02989         83 HTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK  161 (325)
T ss_pred             EeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence            99996532 112223345668899999999998843  46799999998776421            111112      1


Q ss_pred             hHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +.|+.  +|..+|.++    ++.|++++++||+.+||
T Consensus       162 ~~Y~~--sK~~~E~~~~~~~~~~~~~~~ilR~~~vyG  196 (325)
T PLN02989        162 QWYVL--SKTLAEDAAWRFAKDNEIDLIVLNPGLVTG  196 (325)
T ss_pred             cchHH--HHHHHHHHHHHHHHHcCCeEEEEcCCceeC
Confidence            34664  555566544    45699999999999997

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.2e-23  Score=179.13  Aligned_cols=164  Identities=20%  Similarity=0.168  Sum_probs=122.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ...+..+++|++|.+++++++      +++
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5788999999999999999999999999999999999988877655443 234566779999999887653      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +|+||||||......   .+++..++.+++|+.|+.++++++    .+..++||++||..++.+    .+....|+.+  
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~as--  159 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA----APGMAAYCAS--  159 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC----CCCchHHHHH--
Confidence            999999999864211   112222445689999999998876    234579999999888742    2334456544  


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      |..++       .++...||++++++||++.
T Consensus       160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~  190 (296)
T PRK05872        160 KAGVEAFANALRLEVAHHGVTVGSAYLSWID  190 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHCcEEEEEecCccc
Confidence            44433       3445679999999999874

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.3e-23  Score=176.70  Aligned_cols=165  Identities=15%  Similarity=0.101  Sum_probs=120.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.+++.++. ..++.++++|++|.+++++++      ++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999999999999999999999988776665443 346788999999999887654      4689


Q ss_pred             cEEEEcCcCCCcCC--CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          153 THVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       153 D~vi~~Ag~~~~~~--~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      |+||||||......  ..++...+.+++|+.++.++++++    +++.++||++||..+..+    ......|+.+|.. 
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----~~~~~~Y~asKaa~  157 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA----QTGRWLYPASKAAI  157 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC----CCCCchhHHHHHHH
Confidence            99999999753211  112223445688999999888865    234579999999877632    2223455544431 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          +.+..++...||++++|+||++.
T Consensus       158 ~~~~~~la~e~~~~gi~vn~v~PG~~~  184 (261)
T PRK08265        158 RQLTRSMAMDLAPDGIRVNSVSPGWTW  184 (261)
T ss_pred             HHHHHHHHHHhcccCEEEEEEccCCcc
Confidence                12223344579999999999874

>PLN02253 xanthoxin dehydrogenase

Probab=99.90  E-value=2.7e-23  Score=177.85  Aligned_cols=166  Identities=17%  Similarity=0.131  Sum_probs=120.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+..+++.+.+. ..+++++++|++|.+++++++      +++
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999998876665544332 246889999999999988654      358


Q ss_pred             CcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +|+||||||......     .++++.+..+++|+.|+.++++++     +.+.++||++||..+...    ......|+.
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----~~~~~~Y~~  170 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG----GLGPHAYTG  170 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc----CCCCcccHH
Confidence            999999999753211     112233456789999999988866     234578999999876522    122235665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     +.+..++...||++++++||++.
T Consensus       171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~  202 (280)
T PLN02253        171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVP  202 (280)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence            4432     12223444579999999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-23  Score=176.61  Aligned_cols=166  Identities=20%  Similarity=0.185  Sum_probs=119.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+++++++..+++.    ..++..+.+|++|.+++++++      
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            5688999999999999999999999999999999999887665443221    236778999999999887643      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   ...+.....+++|+.++..+++++    + .+.++||++||..+..+    .+....|+
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~y~  160 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP----EPHMVATS  160 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC----CCCchHhH
Confidence            468999999999754211   111112334578988877777655    2 34679999999887642    22234455


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++.+.||++++|+||++-
T Consensus       161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~  193 (265)
T PRK07062        161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVE  193 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            4443     222334556689999999999874

>PLN02214 cinnamoyl-CoA reductase

Probab=99.90  E-value=6.7e-23  Score=180.57  Aligned_cols=161  Identities=21%  Similarity=0.331  Sum_probs=119.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh-hCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~-~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.... ...+.  ..+++++.+|++|.++++++ +.++|+||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vi   86 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAA-IDGCDGVF   86 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHH-HhcCCEEE
Confidence            4678999999999999999999999999999999986642211 11111  23578899999999999875 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCc-ccccCC-C---Cc------------chhhH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVG-VTKFNE-L---PW------------SIMNL  218 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~-~~~~~~-~---~~------------~~~~~  218 (250)
                      |+|+...      ......+++|+.|+.+++++++ .++++||++||.. .|+... .   +.            .+.+.
T Consensus        87 h~A~~~~------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         87 HTASPVT------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             EecCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence            9998642      1334566899999999999984 6788999999964 554211 0   01            12345


Q ss_pred             HHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          219 FGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      |+.  +|..+|+++    ++.|++++++||+.|||
T Consensus       161 Y~~--sK~~aE~~~~~~~~~~g~~~v~lRp~~vyG  193 (342)
T PLN02214        161 YCY--GKMVAEQAAWETAKEKGVDLVVLNPVLVLG  193 (342)
T ss_pred             HHH--HHHHHHHHHHHHHHHcCCcEEEEeCCceEC
Confidence            664  455555444    45699999999999997

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3.3e-23  Score=177.19  Aligned_cols=164  Identities=13%  Similarity=0.107  Sum_probs=117.2

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+.+   .++++.++.. .. ..+++|++|.+++++++     
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999997  89999999999999999999999852   3344333332 22 57899999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||....     +  ..+.+..+..+++|+.|+..+.+++.   ...++||++||.++..    +.+...
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----~~~~~~  155 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----YVPHYN  155 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----CCCcch
Confidence             5789999999997531     1  11112224466999999988888661   1237899999987653    223344


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++..+||++++|+||++-
T Consensus       156 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~  191 (274)
T PRK08415        156 VMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIK  191 (274)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            5665554     223345566789999999999874

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-23  Score=176.10  Aligned_cols=166  Identities=13%  Similarity=0.108  Sum_probs=121.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++|++|||||+||||++++++|+++|++|++++|++++.+++.+++.  ..++..+.+|++|.+++++++      +++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999999887766554432  346788999999999887543      468


Q ss_pred             CcEEEEcCcCCCcC----CCCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||.....    ..+++.....+++|+.|+..+++++.    +..++||++||.....    +......|+.+|
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----~~~~~~~Y~~sK  158 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH----SQPKYGAYKMAK  158 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc----CCCCcchhHHHH
Confidence            99999999875321    11122234456889999999998872    2346999999987763    233345566544


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..     +....++...||++++++||++++
T Consensus       159 ~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~  189 (258)
T PRK07890        159 GALLAASQSLATELGPQGIRVNSVAPGYIWG  189 (258)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeCCccCc
Confidence            32     122233445699999999999864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.90  E-value=3.6e-23  Score=180.72  Aligned_cols=169  Identities=15%  Similarity=0.173  Sum_probs=120.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +.+|+++||||+||||.+++++|+++|++|++++|+.++.+++.+++.  ..++.++.+|++|.+++++++      .++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999999887766554432  346788999999999888654      246


Q ss_pred             CcEEEEcCcCCCcC----CCCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCcccccC-----------
Q 025619          152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKFN-----------  209 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~~-----------  209 (250)
                      +|+||||||.....    ....+..+..+++|+.|+.++++++    + .+  .+|||++||...+...           
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            99999999975421    1122233456789999999988866    2 22  3699999997654210           


Q ss_pred             --------------------CCCcchhhHHHHHHHHHH--HHHH---H-HhcCCCEEEEecceEE
Q 025619          210 --------------------ELPWSIMNLFGVLKYKKM--GEDF---V-QKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 --------------------~~~~~~~~~y~~~k~k~~--~e~~---~-~~~gi~~~~vrPg~v~  248 (250)
                                          ..++.+...|+.+|....  .+.+   + +..||++++++||+|+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  228 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVA  228 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCccc
Confidence                                012334456776654211  1222   2 2358999999999985

>PLN02427 UDP-apiose/xylose synthase

Probab=99.90  E-value=4.3e-23  Score=184.59  Aligned_cols=166  Identities=14%  Similarity=0.106  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .+.|+||||||+|+||++++++|+++ |++|++++|+.++.+.+....   ...+++++.+|++|.+++.++ +.++|+|
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~-~~~~d~V   90 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGL-IKMADLT   90 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHH-hhcCCEE
Confidence            35578999999999999999999998 599999999876655433211   124689999999999998865 6789999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccC-------CCCcc--------------
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWS--------------  214 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~-------~~~~~--------------  214 (250)
                      ||+|+..... .....+.+.+..|+.++.++++++++..+++|++||..+|+..       +.|..              
T Consensus        91 iHlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~  169 (386)
T PLN02427         91 INLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP  169 (386)
T ss_pred             EEcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence            9999975421 1112223345689999999999986434899999999888732       11110              


Q ss_pred             --------hhhHHHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          215 --------IMNLFGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 --------~~~~y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                              +.+.|+  .+|..+|+++.    ..|++++++||+.|||
T Consensus       170 ~~~~~~~~~~~~Y~--~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyG  214 (386)
T PLN02427        170 CIFGSIEKQRWSYA--CAKQLIERLIYAEGAENGLEFTIVRPFNWIG  214 (386)
T ss_pred             cccCCCCccccchH--HHHHHHHHHHHHHHhhcCCceEEecccceeC
Confidence                    112455  66777776664    4699999999999997

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.3e-23  Score=175.66  Aligned_cols=159  Identities=22%  Similarity=0.258  Sum_probs=119.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      .|++|||||+||||++++++|+++|++|++++|+++.++.+.+.. ..++.++++|++|.+++++++      ++++|+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            478999999999999999999999999999999988777655433 346888999999999887643      3579999


Q ss_pred             EEcCcCCCcCC-CCC--CCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPS-RRW--DGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~-~~~--~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      |||||...... .++  +.....+++|+.|+.++++++    + .+.++||++||..+..    +.+....|+.+|.  .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~--a  154 (276)
T PRK06482         81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI----AYPGFSLYHATKW--G  154 (276)
T ss_pred             EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc----CCCCCchhHHHHH--H
Confidence            99999865322 111  122345578999999999986    3 4668999999987652    2334556665544  3


Q ss_pred             HH-------HHHHhcCCCEEEEecceE
Q 025619          228 GE-------DFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       228 ~e-------~~~~~~gi~~~~vrPg~v  247 (250)
                      ++       +++..+|++++++|||.+
T Consensus       155 ~~~~~~~l~~~~~~~gi~v~~v~pg~~  181 (276)
T PRK06482        155 IEGFVEAVAQEVAPFGIEFTIVEPGPA  181 (276)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcc
Confidence            33       233447999999999987

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=3.9e-23  Score=187.72  Aligned_cols=169  Identities=15%  Similarity=0.134  Sum_probs=119.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-------H----------hhhh--CcCCCCCeeEEEeeCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------A----------TTLF--GKQDEETLQVCKGDTR  139 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-------~----------~~~~--~~~~~~~~~~v~~Dl~  139 (250)
                      .+++|+||||||+||||++++++|+++|++|++++|....       .          +.+.  ......+++++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            5688999999999999999999999999999998753210       0          0000  0001236889999999


Q ss_pred             CccCcchhhhC-CCcEEEEcCcCCCcCCCCCCC--CCCcceehHHHHHHHHHHcc-CCCC-eEEEEccCcccccCC----
Q 025619          140 NPKDLDPAIFE-GVTHVICCTGTTAFPSRRWDG--DNTPEKVDWEGVRNLVSALP-SSLK-RIVLVSSVGVTKFNE----  210 (250)
Q Consensus       140 d~~~~~~~~~~-~~D~vi~~Ag~~~~~~~~~~~--~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iSS~~~~~~~~----  210 (250)
                      |.+++.+++-+ ++|+|||+|+....+....++  ....+++|+.|+.+++++++ .+++ ++|++||..+|+...    
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~  203 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIE  203 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCc
Confidence            99999875322 699999999764422211111  12345789999999999985 4664 899999999987421    


Q ss_pred             ----------------CCcchhhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          211 ----------------LPWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       211 ----------------~~~~~~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                                      .+..+.+.|+.+|  .++|..+    +.+|++++++||+.+||
T Consensus       204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK--~a~E~l~~~~~~~~gl~~v~lR~~~vyG  260 (442)
T PLN02572        204 EGYITITHNGRTDTLPYPKQASSFYHLSK--VHDSHNIAFTCKAWGIRATDLNQGVVYG  260 (442)
T ss_pred             ccccccccccccccccCCCCCCCcchhHH--HHHHHHHHHHHHhcCCCEEEEecccccC
Confidence                            1233456777554  4445433    45699999999999997

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-22  Score=175.72  Aligned_cols=171  Identities=18%  Similarity=0.192  Sum_probs=118.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      +++++|+|+||||+||||++++++|+++|++|++++|+.++.++..+.+    ...++.++.+|++|.+++++++     
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999999999987755433222    1346788999999999887653     


Q ss_pred             -hCCCcEEEEcCcCCCcCC-CCCCCCCCcceehHHHHHHHHH----Hcc-CCCCeEEEEccCcccccC---------CCC
Q 025619          149 -FEGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVS----ALP-SSLKRIVLVSSVGVTKFN---------ELP  212 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~-~~~~~~~~~~~~N~~g~~~l~~----a~~-~~~~~iV~iSS~~~~~~~---------~~~  212 (250)
                       ++++|+||||||....+. ...+..+..+++|+.|+..+.+    .++ .+.++||++||.+++...         ..+
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~  171 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR  171 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence             357999999999764322 1223345567899999655544    443 346799999998754311         112


Q ss_pred             cchhhHHHHHHHHH-----HHHHHHHhcCCCEEEE--ecceEE
Q 025619          213 WSIMNLFGVLKYKK-----MGEDFVQKSGLPFTII--SLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~k~-----~~e~~~~~~gi~~~~v--rPg~v~  248 (250)
                      +.+...|+.+|...     .+...+...|++++++  +||+|.
T Consensus       172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~  214 (306)
T PRK06197        172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSN  214 (306)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCccc
Confidence            34455676555421     1223344568877665  699874

>PRK08589 short chain dehydrogenase; Validated

Probab=99.89  E-value=7.3e-23  Score=174.69  Aligned_cols=165  Identities=16%  Similarity=0.069  Sum_probs=118.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+ ++++++.+++.  ..++..+++|++|++++++++      ++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999999999 55555433322  346788999999998887643      46


Q ss_pred             CCcEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......    +.+..+..+++|+.|+..+++++    ++..++||++||..++.+    ......|+.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~as  157 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA----DLYRSGYNAA  157 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC----CCCCchHHHH
Confidence            79999999998642111    11112345578999988887765    223379999999887642    2233456544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||+|.
T Consensus       158 Kaal~~l~~~la~e~~~~gI~v~~v~PG~v~  188 (272)
T PRK08589        158 KGAVINFTKSIAIEYGRDGIRANAIAPGTIE  188 (272)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            43     122233445679999999999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.5e-23  Score=175.59  Aligned_cols=163  Identities=18%  Similarity=0.206  Sum_probs=121.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|+||||||+||||++++++|+++|++|++++|++++++.+.+.. ...+..+++|++|++++++++      ++++|+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5689999999999999999999999999999999988876655433 345778899999999887643      357999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      ||||||......   ..++...+.+++|+.++.++++++     +.+.+++|++||..++.+    .+....|+.+|.. 
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----~~~~~~Y~~sKaa~  156 (275)
T PRK08263         81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA----FPMSGIYHASKWAL  156 (275)
T ss_pred             EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC----CCCccHHHHHHHHH
Confidence            999999864321   112233445689999998888865     346689999999887742    2334566655542 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          ..+..++...|+++++++||++.
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~~~  183 (275)
T PRK08263        157 EGMSEALAQEVAEFGIKVTLVEPGGYS  183 (275)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCcc
Confidence                12223345579999999999874

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=7.1e-23  Score=178.41  Aligned_cols=163  Identities=19%  Similarity=0.235  Sum_probs=118.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh---hCcC-CCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~---~~~~-~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++|+||||||+|+||++++++|+++|++|++++|+.+.....   .... ...+++++.+|++|+++++++ ++++|+||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSV-VDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHH-HcCCCEEE
Confidence            357999999999999999999999999999999986543221   1110 124688999999999998865 78999999


Q ss_pred             EcCcCCCcCCCCCCCC-CCcceehHHHHHHHHHHcc-C-CCCeEEEEccCcc--cccC----------CCCcch------
Q 025619          157 CCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGV--TKFN----------ELPWSI------  215 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~-~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~--~~~~----------~~~~~~------  215 (250)
                      |+|+....   ....+ ...+++|+.|+.+++++++ . ++++||++||.++  |+..          +.+..+      
T Consensus        82 h~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~  158 (322)
T PLN02662         82 HTASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES  158 (322)
T ss_pred             EeCCcccC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence            99987532   11122 2566899999999999874 4 7889999999764  4321          011111      


Q ss_pred             hhHHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          216 MNLFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       216 ~~~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      .+.|+  .+|..+|++    .++.|++++++||+.+||
T Consensus       159 ~~~Y~--~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~G  194 (322)
T PLN02662        159 KLWYV--LSKTLAEEAAWKFAKENGIDMVTINPAMVIG  194 (322)
T ss_pred             cchHH--HHHHHHHHHHHHHHHHcCCcEEEEeCCcccC
Confidence            13455  455555544    356799999999999987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=3.1e-23  Score=177.06  Aligned_cols=164  Identities=12%  Similarity=0.073  Sum_probs=116.8

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhH---hhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~---~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|++|||||++  |||++++++|+++|++|++++|+.+..   +++.+..  .....+++|++|.+++++++     
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--g~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--GSDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--CCceEEeCCCCCHHHHHHHHHHHHH
Confidence            36789999999997  999999999999999999999875432   2222222  12346899999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcC-------CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||.....       ..+.++.+..+++|+.++.++++++.   ...++||++||.++..    +.+...
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~  157 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR----VMPNYN  157 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc----cCCccc
Confidence             57899999999975321       11122234456899999988887652   1237999999987653    223334


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++..+||+|++|+||++.
T Consensus       158 ~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~  193 (271)
T PRK06505        158 VMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVR  193 (271)
T ss_pred             hhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcc
Confidence            5665554     233445666789999999999874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=4.9e-23  Score=172.36  Aligned_cols=161  Identities=18%  Similarity=0.219  Sum_probs=126.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~Ag~  161 (250)
                      ++||||||+|+||++++.+|++.|++|++++.-...-.+...   .....++++|+.|.+.+++.+- .++|.|||.||.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~---~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~   77 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALL---KLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS   77 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhh---hccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence            479999999999999999999999999999875433222221   1116799999999999987532 379999999998


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc-------CCCCcchhhHHHHHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      ..+++ ..+.+.++++-|+.||..|+++++ .++++|||.||+++|+.       ++.|..|.++||  ++|.+.|+.++
T Consensus        78 ~~VgE-Sv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG--~sKlm~E~iL~  154 (329)
T COG1087          78 ISVGE-SVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYG--RSKLMSEEILR  154 (329)
T ss_pred             cccch-hhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcch--hHHHHHHHHHH
Confidence            87543 344667788999999999999994 69999999999999984       345566788988  56666776664


Q ss_pred             ----hcCCCEEEEecceEEe
Q 025619          234 ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ----~~gi~~~~vrPg~v~~  249 (250)
                          ..+++++++|.-.+.|
T Consensus       155 d~~~a~~~~~v~LRYFN~aG  174 (329)
T COG1087         155 DAAKANPFKVVILRYFNVAG  174 (329)
T ss_pred             HHHHhCCCcEEEEEeccccc
Confidence                4689999999766544

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.89  E-value=3.9e-23  Score=182.46  Aligned_cols=165  Identities=19%  Similarity=0.172  Sum_probs=121.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhC--CCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~  157 (250)
                      ++|+||||||+|+||++++++|+++|++|++++|+.+......+... ..+++++.+|++|.+++.++ ++  ++|+|||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vih   81 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKA-IAEFKPEIVFH   81 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHH-HhhcCCCEEEE
Confidence            57899999999999999999999999999999998764332211111 23577889999999998875 44  5799999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccC--------CCCcchhhHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~  227 (250)
                      +||.... ...+.++...+++|+.|+.+++++++ .+ .++||++||..+|+..        +.+..+.+.|+.  +|..
T Consensus        82 ~A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~--sK~~  158 (349)
T TIGR02622        82 LAAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSS--SKAC  158 (349)
T ss_pred             CCccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchh--HHHH
Confidence            9996432 22333445567899999999999885 34 6799999998887632        123344566765  4555


Q ss_pred             HHHHHHh-----------cCCCEEEEecceEEe
Q 025619          228 GEDFVQK-----------SGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~-----------~gi~~~~vrPg~v~~  249 (250)
                      .|..++.           .|++++++||+.+||
T Consensus       159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyG  191 (349)
T TIGR02622       159 AELVIASYRSSFFGVANFHGIKIASARAGNVIG  191 (349)
T ss_pred             HHHHHHHHHHHhhcccccCCCcEEEEccCcccC
Confidence            5544422           289999999999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.5e-23  Score=177.45  Aligned_cols=167  Identities=16%  Similarity=0.208  Sum_probs=121.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|.+++++++      +
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  115 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI  115 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999999999887766544332  345778999999999887653      3


Q ss_pred             CCCcEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|+||||||.......     .++..+..+++|+.|+.++++++     +.+.++||++||.+++...   .+....|
T Consensus       116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---~p~~~~Y  192 (293)
T PRK05866        116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA---SPLFSVY  192 (293)
T ss_pred             CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---CCCcchH
Confidence            589999999998642211     11222345688999988888765     3466899999997665311   1223455


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEecceE
Q 025619          220 GVLKYK-----KMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       220 ~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      +.+|..     +.+..++++.||++++++||.+
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v  225 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLV  225 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcc
Confidence            544432     1223444567999999999976

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=2.2e-23  Score=187.34  Aligned_cols=178  Identities=23%  Similarity=0.321  Sum_probs=142.6

Q ss_pred             HHHhhhhcccCCCCCCCCCC-CCCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC----CCCe
Q 025619           58 VVHAVQEEVVQTPNSDSKVT-PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD----EETL  131 (250)
Q Consensus        58 ~~~~~~~~~~~~~~~~~~~~-~~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~----~~~~  131 (250)
                      +++++.|.+.....   ... ..+.||+||||||+|.||+++++++++.+. ++++.+|++-++..+..+++    ..++
T Consensus       228 ieDLLgR~pV~~d~---~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~  304 (588)
T COG1086         228 IEDLLGRPPVALDT---ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKL  304 (588)
T ss_pred             HHHHhCCCCCCCCH---HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcce
Confidence            67788777655332   111 246899999999999999999999999986 68889999887666544433    3678


Q ss_pred             eEEEeeCCCccCcchhhhCC--CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCccccc
Q 025619          132 QVCKGDTRNPKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF  208 (250)
Q Consensus       132 ~~v~~Dl~d~~~~~~~~~~~--~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~  208 (250)
                      .++-+|+.|.+.++++ +.+  +|+|||+|+..++|..+.++.+ .+++|+.||.|+++++ +.+++++|.+||..+..+
T Consensus       305 ~~~igdVrD~~~~~~~-~~~~kvd~VfHAAA~KHVPl~E~nP~E-ai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P  382 (588)
T COG1086         305 RFYIGDVRDRDRVERA-MEGHKVDIVFHAAALKHVPLVEYNPEE-AIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP  382 (588)
T ss_pred             EEEecccccHHHHHHH-HhcCCCceEEEhhhhccCcchhcCHHH-HHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC
Confidence            8899999999999976 565  9999999999998887766554 5689999999999988 579999999999999843


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHhc-------CCCEEEEecceEEe
Q 025619          209 NELPWSIMNLFGVLKYKKMGEDFVQKS-------GLPFTIISLCIYCI  249 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~k~~~e~~~~~~-------gi~~~~vrPg~v~~  249 (250)
                             .+.||  .+|+.+|..+...       +-+++++|.|.|+|
T Consensus       383 -------tNvmG--aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         383 -------TNVMG--ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             -------chHhh--HHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence                   34545  6788888766432       47899999999987

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.3e-23  Score=180.84  Aligned_cols=166  Identities=12%  Similarity=0.105  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|++++++++.+++.  +.++.++.+|++|.+++++++      ++
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999988876654332  346778899999999988654      37


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|++|||||.......   ..+..++.+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~----~~p~~~~Y~as  159 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA----AQPYAAAYSAS  159 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC----CCCCchhHHHH
Confidence            89999999997643221   11122345689999998887765     24567999999988763    22334566655


Q ss_pred             HH-----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                      |.     ...+..++.+ .||+++.|+||++.
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~  191 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMD  191 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCcc
Confidence            54     2222334444 48999999999874

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.7e-23  Score=174.45  Aligned_cols=168  Identities=13%  Similarity=0.114  Sum_probs=120.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++..+.+|++|++++++++      ++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999887776654332  346778999999999887654      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   .+.+..+..+++|+.++..+++++     +++ .++||++||..+.....  ......|+.
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~~~~~~Y~a  163 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--PQQVSHYCA  163 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--CCCccchHH
Confidence            8999999999764221   111122345589999999988876     222 36899999987642110  011234554


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++-
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~  195 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYIL  195 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCC
Confidence            443     222334455679999999999873

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.89  E-value=1.8e-22  Score=175.97  Aligned_cols=147  Identities=29%  Similarity=0.474  Sum_probs=118.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|+||||||+||++++++|+++|++|++++|+.++...+.    ..+++++.+|++|++++.++ +.++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~a-l~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPPS-FKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHHH-HCCCCEEEECCCCC
Confidence            37999999999999999999999999999999976654332    34688999999999999875 78999999987643


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEEE
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~~  241 (250)
                      .      .+.....++|+.++.+++++++ .+++|+|++||.+......      ..  +.++|...|+++++.|+++++
T Consensus        76 ~------~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~------~~--~~~~K~~~e~~l~~~~l~~ti  141 (317)
T CHL00194         76 P------SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPY------IP--LMKLKSDIEQKLKKSGIPYTI  141 (317)
T ss_pred             C------CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCC------Ch--HHHHHHHHHHHHHHcCCCeEE
Confidence            1      2334456889999999999985 6899999999965432111      12  446788899999999999999


Q ss_pred             EecceEE
Q 025619          242 ISLCIYC  248 (250)
Q Consensus       242 vrPg~v~  248 (250)
                      +||+.+|
T Consensus       142 lRp~~~~  148 (317)
T CHL00194        142 FRLAGFF  148 (317)
T ss_pred             EeecHHh
Confidence            9999765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.89  E-value=2.5e-22  Score=170.36  Aligned_cols=162  Identities=15%  Similarity=0.135  Sum_probs=117.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++++++.+.. ..++..+++|++|.+++++++      ++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999999999999999999999988777665432 345788999999988877643      4689


Q ss_pred             cEEEEcCcCCCc--CCCC--C----CCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAF--PSRR--W----DGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~--~~~~--~----~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||....  +..+  .    +..++.+++|+.++..+++++.    +..+++|++||..++.+    ......|+
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y~  156 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP----NGGGPLYT  156 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC----CCCCchhH
Confidence            999999997431  1111  1    1224567999999999988762    23368999998877632    22233555


Q ss_pred             HHHHHHHHHH-------HHHhcCCCEEEEecceEE
Q 025619          221 VLKYKKMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                      .  +|.+++.       ++... |+++.|+||++.
T Consensus       157 ~--sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~  188 (262)
T TIGR03325       157 A--AKHAVVGLVKELAFELAPY-VRVNGVAPGGMS  188 (262)
T ss_pred             H--HHHHHHHHHHHHHHhhccC-eEEEEEecCCCc
Confidence            4  4444442       23333 999999999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.89  E-value=6.8e-23  Score=173.14  Aligned_cols=166  Identities=14%  Similarity=0.162  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++.+++.+.. ...+.++.+|++|++++++++      ++++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            356889999999999999999999999999999999998777655443 345788999999999887654      3579


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----C-CCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~-~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   ..+++.+..+++|+.++.++++++.     + ..++||++||.....    +.++...|+.+|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK  157 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR----GEALVSHYCATK  157 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC----CCCCCchhhhhH
Confidence            99999999764211   1122334456899999999998772     1 236899999976552    223445666554


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..     +.+..++...||++++|+||++.+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t  188 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDT  188 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccc
Confidence            32     122233446799999999999864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=6.4e-23  Score=173.03  Aligned_cols=166  Identities=13%  Similarity=0.079  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++.+|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++..+.+|++|++++++++      ++
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999887666544332  235678899999999887653      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   .+.++.+..+++|+.++..+++++     +.+.++||++||..+..+    ......|+.+
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~s  161 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG----RDTITPYAAS  161 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC----CCCCcchHHH
Confidence            7999999999753211   111222345688999998888866     235679999999876532    2233455544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++.+.||++++|+||++.
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~pG~~~  192 (254)
T PRK08085        162 KGAVKMLTRGMCVELARHNIQVNGIAPGYFK  192 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCCCC
Confidence            43     222334445679999999999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-22  Score=178.63  Aligned_cols=166  Identities=16%  Similarity=0.125  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+|+||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|.+++++++      ++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4678999999999999999999999999999999999887776544332  346788999999999988653      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|++|||||......   ...+..+..+++|+.|+.++++++    + .+.++||++||..++.+    .+....|+.+
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~----~~~~~~Y~as  160 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS----IPLQSAYCAA  160 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC----CCcchHHHHH
Confidence            8999999999754221   111222445688988877766544    2 45689999999988842    2334566655


Q ss_pred             HHH-----HHHHHHHHh--cCCCEEEEecceEE
Q 025619          223 KYK-----KMGEDFVQK--SGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~~e~~~~~--~gi~~~~vrPg~v~  248 (250)
                      |..     ..+..++..  .+|++++|+||.+.
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~  193 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVN  193 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCcc
Confidence            441     112233332  47999999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.2e-22  Score=172.17  Aligned_cols=166  Identities=14%  Similarity=0.116  Sum_probs=118.0

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.   +.++++.+++...++..+++|++|++++++++     
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999997  8999999999999999999997753   44555544443456788999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcC---C----CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFP---S----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~---~----~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|++|||||.....   .    .+.+.....+++|+.++..+++++.   ...++||++||..+..    +.+...
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~  159 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----VVQNYN  159 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----CCCCCc
Confidence             47899999999975311   0    1111122345889999888777652   1247999999987763    223334


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++...||++++|+||++.
T Consensus       160 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  195 (257)
T PRK08594        160 VMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIR  195 (257)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCccc
Confidence            5665443     223334556689999999999874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=1.3e-22  Score=160.87  Aligned_cols=164  Identities=12%  Similarity=0.125  Sum_probs=127.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+.|.+||||||++|||.+++++|.+.|-+|++++|+.+++++..++  .+.+....||+.|.+++++.+      +..+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~--~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE--NPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc--CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            45788999999999999999999999999999999999999987765  467888999999999888644      4579


Q ss_pred             cEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++||||||++...+-     ..+..++...+|+.++.++..++     ++....||++||..++.    |......|+.+
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv----Pm~~~PvYcaT  155 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV----PMASTPVYCAT  155 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC----cccccccchhh
Confidence            999999999863211     11111334478999999888766     34467899999999884    44444455544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+     ..++...++..+|+|.-+.|+.|-
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~  186 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVD  186 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCcee
Confidence            43     445667778889999999999874

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=8.2e-23  Score=172.24  Aligned_cols=167  Identities=13%  Similarity=0.106  Sum_probs=115.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++|+++||||+||||++++++|+++|++|++++|++++++++.+.+    ....+.++++|++|++++.+++      +
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999988776554332    1234667799999999887654      3


Q ss_pred             CCCcEEEEcCcCCCcC------CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCC------CC
Q 025619          150 EGVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNE------LP  212 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~------~~  212 (250)
                      +++|+|||||+.....      ..+++.....+++|+.++..+++++     +.+.++||++||..+.....      .+
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            5699999999754211      1111122334577888877776654     24667999999987653211      11


Q ss_pred             cchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          213 WSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ......|+.+|  ...+       .++...||++++++||.+.
T Consensus       162 ~~~~~~Y~~sK--~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~  202 (256)
T PRK09186        162 MTSPVEYAAIK--AGIIHLTKYLAKYFKDSNIRVNCVSPGGIL  202 (256)
T ss_pred             cCCcchhHHHH--HHHHHHHHHHHHHhCcCCeEEEEEeccccc
Confidence            11223466444  3333       3444579999999999874

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-22  Score=170.51  Aligned_cols=164  Identities=12%  Similarity=0.169  Sum_probs=117.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhh-HhhhhCcCC---CCCeeEEEeeCCCccCcchhh-----hC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----FE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~-~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~-----~~  150 (250)
                      .+|+|+||||+||||++++++|+++| ++|++++|++++ ++++.+++.   ..+++++++|++|.+++++.+     .+
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            45799999999999999999999995 899999999875 554433221   236889999999998876533     25


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCC---CcceehHHHHHHHHHH----c-cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDN---TPEKVDWEGVRNLVSA----L-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~---~~~~~N~~g~~~l~~a----~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|++|||+|........|.+..   +.+++|+.++..++++    + +.+.++||++||..+..+    ......|+.+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~----~~~~~~Y~~s  162 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV----RRSNFVYGST  162 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC----CCCCcchHHH
Confidence            79999999998643222332221   2468999998876544    3 346789999999876532    2233456554


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |..     +.+..+++.+|+++++++||++.
T Consensus       163 Kaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~  193 (253)
T PRK07904        163 KAGLDGFYLGLGEALREYGVRVLVVRPGQVR  193 (253)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEEEEeeCcee
Confidence            431     23445667789999999999985

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.2e-22  Score=172.10  Aligned_cols=164  Identities=13%  Similarity=0.083  Sum_probs=117.8

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChhh---HhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEK---ATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~~---~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.+.   ++++.++.  ....++++|++|.+++++++     
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHHH
Confidence            5688999999998  599999999999999999999998643   33333332  23457899999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcC-------CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|++|||||.....       ..+.+..+..+++|+.|+.++++++.   ...++||++||.++..    +.+...
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~----~~~~~~  160 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK----VVENYN  160 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc----CCccch
Confidence             57899999999975311       11112234566899999999888651   2236899999977652    233345


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|+     .+.+..++...||++++|+||++.
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~  196 (258)
T PRK07533        161 LMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLK  196 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcC
Confidence            5665554     223345556789999999999874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.89  E-value=1.1e-22  Score=172.33  Aligned_cols=164  Identities=13%  Similarity=0.107  Sum_probs=116.8

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh------hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~------~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      ++++|+++||||+  +|||++++++|+++|++|++..|+.      +.++++.+.  ...+.++++|++|++++++++  
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~   80 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFET   80 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHH
Confidence            3578999999986  8999999999999999998886543      223333222  124668899999999988654  


Q ss_pred             ----hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcc
Q 025619          149 ----FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       149 ----~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                          ++++|++|||||....     +  ..+.+..++.+++|+.|+..+++++.   ...++||++||..+..    +.+
T Consensus        81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~----~~~  156 (258)
T PRK07370         81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR----AIP  156 (258)
T ss_pred             HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----CCc
Confidence                5689999999997531     1  11222335567999999999888762   1237999999987652    333


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ....|+.+|+     .+.+..++...||++++|+||++-
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~  195 (258)
T PRK07370        157 NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIR  195 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCccc
Confidence            4456665553     223345556689999999999874

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.4e-22  Score=170.88  Aligned_cols=161  Identities=17%  Similarity=0.096  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +|++|||||+|+||++++++|+++|++|++++|++++.+++.+...  ..++.++.+|++|++++.+++.+++|+|||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            5789999999999999999999999999999999876655433211  34678899999999999876444899999999


Q ss_pred             cCCCcCCCCC---CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHH--
Q 025619          160 GTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE--  229 (250)
Q Consensus       160 g~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e--  229 (250)
                      |.........   +.....+++|+.|+.++.+++     +.+.++||++||..+...    .+....|+.  +|..++  
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~----~~~~~~Y~~--sK~a~~~~  155 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT----GPFTGAYCA--SKHALEAI  155 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC----CCCcchhHH--HHHHHHHH
Confidence            9764221111   111234578999987776643     345689999999876532    122345554  444444  


Q ss_pred             -----HHHHhcCCCEEEEecceEE
Q 025619          230 -----DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       230 -----~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+++..|+++++|+||++.
T Consensus       156 ~~~l~~~~~~~gi~~~~v~pg~~~  179 (257)
T PRK09291        156 AEAMHAELKPFGIQVATVNPGPYL  179 (257)
T ss_pred             HHHHHHHHHhcCcEEEEEecCccc
Confidence                 3445679999999999873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.89  E-value=1.2e-22  Score=170.26  Aligned_cols=165  Identities=14%  Similarity=0.111  Sum_probs=125.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +.+|++||||||++|+|++++.+++++|+++++.+.+.+..++..++.+. +.+..+.||++|.+++.+..      .|.
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            67899999999999999999999999999999999998877776554432 36889999999999887643      678


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||+.....   .+.+..+..+++|+.|.....+++     +...++||.++|.++..    +......|+.+|
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----g~~gl~~YcaSK  190 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF----GPAGLADYCASK  190 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc----CCccchhhhhhH
Confidence            999999999986322   111122446689999988877776     34678999999999983    333344555444


Q ss_pred             H-----HHHHHHHHHh---cCCCEEEEecceE
Q 025619          224 Y-----KKMGEDFVQK---SGLPFTIISLCIY  247 (250)
Q Consensus       224 ~-----k~~~e~~~~~---~gi~~~~vrPg~v  247 (250)
                      .     ...+..+++.   .||+.+.++|+.+
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i  222 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFI  222 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeec
Confidence            3     3334445543   4799999999875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.89  E-value=8.4e-23  Score=172.75  Aligned_cols=164  Identities=13%  Similarity=0.119  Sum_probs=117.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ..+++|++|||||+||||.+++++|+++|++|++++|+ ++.+++.+...  ..++.++++|++|.+++++++      +
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35688999999999999999999999999999999998 33333322211  346788999999999887643      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|++|||||......   ...+..+..+++|+.++..+++++     +.+.++||++||..++.+    ......|+.
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~a  165 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG----GKFVPAYTA  165 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC----CCCchhhHH
Confidence            57999999999754211   111122345578999988888765     245679999999887632    222345554


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +  |.+++       +++...||++++|+||++.
T Consensus       166 s--K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~  197 (258)
T PRK06935        166 S--KHGVAGLTKAFANELAAYNIQVNAIAPGYIK  197 (258)
T ss_pred             H--HHHHHHHHHHHHHHhhhhCeEEEEEEecccc
Confidence            4  44333       3445679999999999874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-22  Score=171.75  Aligned_cols=168  Identities=10%  Similarity=0.009  Sum_probs=122.5

Q ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        77 ~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ..++.+|+++||||+|+||++++++|+++|++|++++|+.+++++..+.+.  ..++.++++|++|.+++++++      
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            335678999999999999999999999999999999999887766543332  346788999999999988754      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   ..++.....+++|+.|+..+++++     +.+.++||++||..+..+    ......|+
T Consensus        85 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~  160 (265)
T PRK07097         85 VGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG----RETVSAYA  160 (265)
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC----CCCCccHH
Confidence            367999999999864221   112223345578999988888765     235689999999766532    22334555


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+.+++...||+++.|+||++.
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~  193 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIA  193 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEecccc
Confidence            4443     222334455679999999999874

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=1.9e-22  Score=178.21  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=117.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi  156 (250)
                      ||+||||||+|+||++++++|+++|++++++ +|....  ...+.......+++++.+|++|.++++++ +.  ++|+||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~Vi   79 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV-FTEHQPDCVM   79 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHH-HhhcCCCEEE
Confidence            3689999999999999999999999885544 443221  11111111123577889999999998875 44  599999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc----------CCCCeEEEEccCcccccC---------CCCcchhh
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP----------SSLKRIVLVSSVGVTKFN---------ELPWSIMN  217 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~----------~~~~~iV~iSS~~~~~~~---------~~~~~~~~  217 (250)
                      |+||.... ...++.....+++|+.|+.++++++.          .+++++|++||.++|+..         +.+..+.+
T Consensus        80 h~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s  158 (355)
T PRK10217         80 HLAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSS  158 (355)
T ss_pred             ECCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCC
Confidence            99997642 22233445677999999999999884          245799999998887631         22344556


Q ss_pred             HHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+  |.++|..    .++.|++++++||+.+||
T Consensus       159 ~Y~~s--K~~~e~~~~~~~~~~~~~~~i~r~~~v~G  192 (355)
T PRK10217        159 PYSAS--KASSDHLVRAWLRTYGLPTLITNCSNNYG  192 (355)
T ss_pred             hhHHH--HHHHHHHHHHHHHHhCCCeEEEeeeeeeC
Confidence            67754  5555433    356799999999999987

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-22  Score=170.19  Aligned_cols=162  Identities=16%  Similarity=0.119  Sum_probs=119.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|++++++.+.+.. ..++.++++|++|.+++++++      ++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            357899999999999999999999999999999999988877665443 345778999999998887643      4689


Q ss_pred             cEEEEcCcCCCc--C--CCCCCC----CCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAF--P--SRRWDG----DNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~--~--~~~~~~----~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||....  +  ...++.    .+..+++|+.++..+++++    ++..++||++||..++.+    ......|+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y~  157 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP----GGGGPLYT  157 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC----CCCCchhH
Confidence            999999997532  1  111111    2345689999988888866    233478999999887742    22334566


Q ss_pred             HHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          221 VLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.  +++       .++.. +|++++|+||++.
T Consensus       158 ~sK~--a~~~~~~~la~el~~-~Irvn~i~PG~i~  189 (263)
T PRK06200        158 ASKH--AVVGLVRQLAYELAP-KIRVNGVAPGGTV  189 (263)
T ss_pred             HHHH--HHHHHHHHHHHHHhc-CcEEEEEeCCccc
Confidence            5443  333       23333 5999999999874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=1.3e-22  Score=172.07  Aligned_cols=164  Identities=13%  Similarity=0.079  Sum_probs=115.9

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|+++||||++  |||++++++|+++|++|++.+|+..   .++++.++.  .....+++|++|++++++++     
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999997  9999999999999999999988742   222232221  12345789999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||....     +  +.+.+.....+++|+.++..+++++.   ...++||++||..+..    +.+...
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~  158 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK----VIPNYN  158 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----CCCccc
Confidence             5789999999997531     1  11112233456889999999888652   2237999999987652    233344


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++..+||++++|+||++-
T Consensus       159 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~  194 (260)
T PRK06603        159 VMGVAKAALEASVKYLANDMGENNIRVNAISAGPIK  194 (260)
T ss_pred             chhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCc
Confidence            5665554     233445566789999999999874

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.88  E-value=2.9e-22  Score=176.67  Aligned_cols=160  Identities=15%  Similarity=0.164  Sum_probs=118.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCC-CccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~-d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+||||||+|+||++++++|+++ |++|++++|+.++...+..   ..+++++.+|++ |.+.+.++ ++++|+|||+|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~-~~~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN---HPRMHFFEGDITINKEWIEYH-VKKCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc---CCCeEEEeCCCCCCHHHHHHH-HcCCCEEEECcc
Confidence            58999999999999999999986 6999999997765443321   346889999998 55666654 678999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC-------C-Cc------chhhHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------L-PW------SIMNLFGVLKYKK  226 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~-------~-~~------~~~~~y~~~k~k~  226 (250)
                      .... ...+.+++..+++|+.|+.++++++++..+++|++||..+|+...       . +.      .+.+.|+  .+|.
T Consensus        78 ~~~~-~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~--~sK~  154 (347)
T PRK11908         78 IATP-ATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYA--CSKQ  154 (347)
T ss_pred             cCCh-HHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHH--HHHH
Confidence            7542 222334555678999999999999854337999999998887321       1 11      1233566  4555


Q ss_pred             HHHHHH----HhcCCCEEEEecceEEe
Q 025619          227 MGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .+|+++    ++.|++++++||+.+||
T Consensus       155 ~~e~~~~~~~~~~~~~~~ilR~~~v~G  181 (347)
T PRK11908        155 LMDRVIWAYGMEEGLNFTLFRPFNWIG  181 (347)
T ss_pred             HHHHHHHHHHHHcCCCeEEEeeeeeeC
Confidence            566554    45799999999999987

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.88  E-value=1.5e-21  Score=164.73  Aligned_cols=163  Identities=32%  Similarity=0.441  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhhh-CCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~~-~~~D~vi  156 (250)
                      +..+|+|+||||+|+||++++++|+++|++|+++.|++++.......  ..+++++.+|++|. +++.+. + .++|+||
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~-~~~~~d~vi   90 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEA-IGDDSDAVI   90 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHHHH-hhcCCCEEE
Confidence            34578999999999999999999999999999999998876543321  34688999999984 555544 5 5899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-CCCc----chhhHHHH-HHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-ELPW----SIMNLFGV-LKYKKMGE  229 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-~~~~----~~~~~y~~-~k~k~~~e  229 (250)
                      |++|....    + +....+++|+.++.+++++++ .+.++||++||.++++.. ..+.    .....|+. ...|...|
T Consensus        91 ~~~g~~~~----~-~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e  165 (251)
T PLN00141         91 CATGFRRS----F-DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAE  165 (251)
T ss_pred             ECCCCCcC----C-CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHH
Confidence            99986421    1 122345889999999999885 578999999999887532 1111    11122332 23477788


Q ss_pred             HHHHhcCCCEEEEecceEEe
Q 025619          230 DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +++++.|+++++||||++++
T Consensus       166 ~~l~~~gi~~~iirpg~~~~  185 (251)
T PLN00141        166 KYIRKSGINYTIVRPGGLTN  185 (251)
T ss_pred             HHHHhcCCcEEEEECCCccC
Confidence            88899999999999999864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-22  Score=171.76  Aligned_cols=165  Identities=11%  Similarity=0.110  Sum_probs=117.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.++..+.+.  ..++.++++|++|.+++++++      ++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999999999877665543322  345778999999999887643      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHH----HHHHHHc-c-CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGV----RNLVSAL-P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~----~~l~~a~-~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   ..++..+..+++|+.++    .++++.+ + .+.++||++||..+...    .+....|+.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~y~~  159 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA----SPLKSAYVT  159 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC----CCCCcccHH
Confidence            6999999999864221   11222344567899994    4455555 3 45789999999766532    222345554


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.  ..+       ..+...++++++++||++++
T Consensus       160 sk~--a~~~~~~~la~~~~~~~i~v~~v~pg~v~~  192 (262)
T PRK13394        160 AKH--GLLGLARVLAKEGAKHNVRSHVVCPGFVRT  192 (262)
T ss_pred             HHH--HHHHHHHHHHHHhhhcCeEEEEEeeCcccc
Confidence            443  332       22344689999999998864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=1.5e-22  Score=171.40  Aligned_cols=162  Identities=18%  Similarity=0.184  Sum_probs=114.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      |+++||||+||||++++++|+++|++|++++|+++++++..+++. ..++.++++|++|++++++++      ++++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            479999999999999999999999999999999887766544332 236788999999999888654      4689999


Q ss_pred             EEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHH----c--cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          156 ICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSA----L--PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       156 i~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a----~--~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |||||......     ..+++....+++|+.++..+...    +  +.+.++||++||..+..    +.+....|+.+|+
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----~~~~~~~y~~sKa  156 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----PMPPLVLADVTRA  156 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC----CCCCchHHHHHHH
Confidence            99999753211     11111222346788776655443    2  23467999999988763    3333455655543


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||+++.|+||++-
T Consensus       157 a~~~~~~~la~e~~~~gI~v~~v~pG~v~  185 (259)
T PRK08340        157 GLVQLAKGVSRTYGGKGIRAYTVLLGSFD  185 (259)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEeccCccc
Confidence                 222334455679999999999873

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-22  Score=171.09  Aligned_cols=161  Identities=11%  Similarity=0.052  Sum_probs=119.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-------hCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------~~~~D~  154 (250)
                      ||++|||||+||||++++++|+++|++|++++|++++++++.+.....+++++++|++|.+++.+++       .+++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            4789999999999999999999999999999999988877655444457889999999998887643       347899


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      ||||||......   ..++..+..+++|+.++.++++++     ..+.++||++||..+..+    ......|+.  +|.
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~--sKa  154 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG----QPGLAVYSA--TKF  154 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC----CCCchhhHH--HHH
Confidence            999999864321   111223445688999999998876     235689999999876532    122344554  443


Q ss_pred             HHH-------HHHHhcCCCEEEEecceEE
Q 025619          227 MGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .++       .+++..|+++++++||++.
T Consensus       155 a~~~~~~~l~~~~~~~~i~v~~i~pg~~~  183 (260)
T PRK08267        155 AVRGLTEALDLEWRRHGIRVADVMPLFVD  183 (260)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCCcC
Confidence            333       3334568999999999873

>PRK07985 oxidoreductase; Provisional

Probab=99.88  E-value=1.1e-22  Score=175.68  Aligned_cols=167  Identities=13%  Similarity=0.085  Sum_probs=118.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh--hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~--~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|+.  +..+++.+...  ..++.++.+|++|.+++.+++      
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999987653  33333322211  345778999999998887543      


Q ss_pred             hCCCcEEEEcCcCCCc----CCCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          149 FEGVTHVICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~----~~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++++|++|||||....    ....+++....+++|+.|+.++++++.   ...++||++||..++.+    ......|+.
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~----~~~~~~Y~a  201 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP----SPHLLDYAA  201 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC----CCCcchhHH
Confidence            5689999999996421    112223334567899999999998772   12369999999988742    223345665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|..     +.+..++...||++++|+||++.+
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t  234 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT  234 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcc
Confidence            5431     222334456799999999999864

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.7e-22  Score=168.56  Aligned_cols=167  Identities=11%  Similarity=0.024  Sum_probs=119.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.++.++..+.+. ..++.++++|++|++++++++      +++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999876655443322 345788999999999988653      358


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||.......   +.+..+..+++|+.++.++.+++     +.+.++||++||..+...    ......|+.+|
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~----~~~~~~Y~~sK  157 (252)
T PRK06138         82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG----GRGRAAYVASK  157 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC----CCCccHHHHHH
Confidence            9999999997642111   11112334578999988877755     246689999999876532    22334566544


Q ss_pred             HHH-----HHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YKK-----MGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~-----~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ...     .+..++...|+++++++||++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t  188 (252)
T PRK06138        158 GAIASLTRAMALDHATDGIRVNAVAPGTIDT  188 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEECCccC
Confidence            321     11223345699999999998853

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.88  E-value=6.4e-22  Score=174.97  Aligned_cols=167  Identities=20%  Similarity=0.285  Sum_probs=120.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ..+|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+ ...+++++.+|++|.+++.++ +.++|+|||+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA-VKGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH-HcCCCEEEEC
Confidence            35679999999999999999999999999999999876654433222 134688899999999998875 6789999999


Q ss_pred             CcCCCcCC-CCCCCCCC-----cceehHHHHHHHHHHcc-C-CCCeEEEEccCcccccCC------CCc-----c-----
Q 025619          159 TGTTAFPS-RRWDGDNT-----PEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKFNE------LPW-----S-----  214 (250)
Q Consensus       159 Ag~~~~~~-~~~~~~~~-----~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~~~~~~------~~~-----~-----  214 (250)
                      |+...... ....+...     .++.|+.|+.+++++++ . ++++||++||.++|+...      .+.     .     
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~  166 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV  166 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence            99764321 11122222     23445799999999884 4 478999999998886211      011     1     


Q ss_pred             -----hhhHHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          215 -----IMNLFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 -----~~~~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                           +...|+  .+|.++|+.    .+..|++++++||+.|||
T Consensus       167 ~~~~~~~~~Y~--~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG  208 (353)
T PLN02896        167 WNTKASGWVYV--LSKLLTEEAAFKYAKENGIDLVSVITTTVAG  208 (353)
T ss_pred             hccCCCCccHH--HHHHHHHHHHHHHHHHcCCeEEEEcCCcccC
Confidence                 112566  455555543    455799999999999987

>PRK06398 aldose dehydrogenase; Validated

Probab=99.88  E-value=2.8e-22  Score=169.81  Aligned_cols=154  Identities=14%  Similarity=0.105  Sum_probs=114.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+..         .++.++++|++|++++++++      ++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999999999986432         25778999999999887654      4689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.++.+..+++|+.|+..+++++     +.+.++||++||..++.    +......|+.+| 
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK-  148 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----VTRNAAAYVTSK-  148 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc----CCCCCchhhhhH-
Confidence            999999998542211   11122344689999999988876     23568999999988773    333445666444 


Q ss_pred             HHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          225 KKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                       .+++.+       +.. +|++++|+||++.
T Consensus       149 -aal~~~~~~la~e~~~-~i~vn~i~PG~v~  177 (258)
T PRK06398        149 -HAVLGLTRSIAVDYAP-TIRCVAVCPGSIR  177 (258)
T ss_pred             -HHHHHHHHHHHHHhCC-CCEEEEEecCCcc
Confidence             433322       222 4999999999874

>PRK08643 acetoin reductase; Validated

Probab=99.88  E-value=1.4e-22  Score=170.99  Aligned_cols=164  Identities=16%  Similarity=0.154  Sum_probs=117.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++|+++||||+||||++++++|+++|++|++++|+.++.+.+..++.  ..++.++++|++|++++++++      ++++
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL   80 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999999877665544332  346778999999999887643      4679


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-C-CCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-S-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~-~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||.......   +++..+..+++|+.++..+++++    + . ..++||++||..+..+    .+....|+.+|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK  156 (256)
T PRK08643         81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG----NPELAVYSSTK  156 (256)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC----CCCCchhHHHH
Confidence            999999997542111   11122345678999988777765    2 2 2468999999876632    22334566554


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..     +.+..++.+.||++++|+||++.
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  186 (256)
T PRK08643        157 FAVRGLTQTAARDLASEGITVNAYAPGIVK  186 (256)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCc
Confidence            42     12223445679999999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.88  E-value=1.4e-22  Score=173.30  Aligned_cols=166  Identities=17%  Similarity=0.198  Sum_probs=119.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++.+|+++||||+||||++++++|+++|++|++++|+.++.+++.+++.  ..++.++++|++|.+++++++      ++
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999877666544332  235788999999998887643      46


Q ss_pred             CCcEEEEcCcCCCcCCC------------------CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccc
Q 025619          151 GVTHVICCTGTTAFPSR------------------RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~------------------~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~  207 (250)
                      ++|+||||||.......                  ..++....+++|+.++..+++++     +.+.++||++||..++.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            89999999996532110                  01112334578999988776654     24568999999998874


Q ss_pred             cCCCCcchhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          208 FNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       208 ~~~~~~~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          +......|+.+|..     +.+..++...||++++|+||++.
T Consensus       167 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~  208 (278)
T PRK08277        167 ----PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFL  208 (278)
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCc
Confidence                33344556654431     12223344579999999999874

>PRK05717 oxidoreductase; Validated

Probab=99.88  E-value=4.3e-22  Score=168.11  Aligned_cols=165  Identities=15%  Similarity=0.128  Sum_probs=120.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.++.+++.+.. ..++.++++|++|.+++++++      +++
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999999999999877665544333 346788999999998886543      457


Q ss_pred             CcEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||.......     +.++....+++|+.++.++++++.    ...++||++||..+..+    ......|+. 
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~----~~~~~~Y~~-  159 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS----EPDTEAYAA-  159 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC----CCCCcchHH-
Confidence            9999999997642111     111223466899999999999872    23478999999887642    222345654 


Q ss_pred             HHHHHHHHHHH----h--cCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ----K--SGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~----~--~gi~~~~vrPg~v~~  249 (250)
                       +|.+++.+.+    +  .++++++++||++.+
T Consensus       160 -sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t  191 (255)
T PRK05717        160 -SKGGLLALTHALAISLGPEIRVNAVSPGWIDA  191 (255)
T ss_pred             -HHHHHHHHHHHHHHHhcCCCEEEEEecccCcC
Confidence             4444443322    2  359999999998853

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-22  Score=170.12  Aligned_cols=161  Identities=18%  Similarity=0.161  Sum_probs=116.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+...       ..++.++++|++|++++++++      ++++
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-------PEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999999865421       335778999999998877543      4689


Q ss_pred             cEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      |+||||||......     ...++.+..+++|+.|+.++++++     +.+.++||++||..+..+..   .....|+.+
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---~~~~~Y~~s  155 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP---ESTTAYAAA  155 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---CCcchhHHH
Confidence            99999999653111     111223445688999998887654     24567899999988764211   133456544


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     +.+..++...||++++|+||++.+
T Consensus       156 K~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t  187 (260)
T PRK06523        156 KAALSTYSKSLSKEVAPKGVRVNTVSPGWIET  187 (260)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence            431     122334456799999999999853

>PRK06128 oxidoreductase; Provisional

Probab=99.88  E-value=1.2e-22  Score=175.83  Aligned_cols=167  Identities=12%  Similarity=0.077  Sum_probs=118.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh--hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~--~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|++|||||+||||++++++|+++|++|+++.++.+  ..+++.+.+.  ..++.++++|++|.+++++++      
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999998877543  2222222211  345778999999998887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          149 FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++++|+||||||......    ..++..+..+++|+.|+.++++++.   ...++||++||..++..    ......|+.
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~a  207 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP----SPTLLDYAS  207 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC----CCCchhHHH
Confidence            468999999999753211    1222334566899999999999873   23369999999988743    222344554


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|..     +.+..++...||++++|+||++.+
T Consensus       208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t  240 (300)
T PRK06128        208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWT  240 (300)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcC
Confidence            4431     122234455799999999999853

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-22  Score=172.17  Aligned_cols=166  Identities=13%  Similarity=0.094  Sum_probs=113.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|+++||||++|||++++++|+++|++|+++.| +.++++...+++.   +.++.++++|++|++++++++      
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            568899999999999999999999999999998865 5555544332221   346788999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---------CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcc
Q 025619          149 FEGVTHVICCTGTTAFPS---------RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---------~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                      ++++|+||||||......         .+.+.....+++|+.+...+.+.+    + .+.++||++||..+..    +.+
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~  160 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV----YIE  160 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----CCC
Confidence            468999999998642110         011112334577888876665544    2 3457999999987652    222


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ....|+.+|.     .+.+..++..+||++++|+||++-
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~  199 (260)
T PRK08416        161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPID  199 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence            2335554443     222334455679999999999873

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-22  Score=171.58  Aligned_cols=159  Identities=15%  Similarity=0.112  Sum_probs=116.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      ||++|||||+||||++++++|+++|++|++++|+.++.+.+.+    .+++++.+|++|.+++++++      ++++|+|
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999999999999999999887766542    35678899999998887643      3679999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH---
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK---  225 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k---  225 (250)
                      |||||......   ..++..+..+++|+.|+.++++++    +++.++||++||..+...    ......|+.+|..   
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK~al~~  152 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV----TPFAGAYCASKAAVHA  152 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC----CCCccHHHHHHHHHHH
Confidence            99999754221   111222345688999998888876    345578999999877632    2233456544431   


Q ss_pred             --HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 --KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 --~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        ..+..++++.||++++++||.|.
T Consensus       153 ~~~~l~~e~~~~gi~v~~v~pg~v~  177 (274)
T PRK05693        153 LSDALRLELAPFGVQVMEVQPGAIA  177 (274)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccc
Confidence              12223445679999999999884

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.88  E-value=2.9e-22  Score=169.47  Aligned_cols=162  Identities=15%  Similarity=0.086  Sum_probs=113.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|++. .+++.+++.  ..++.++++|++|.+++++++      ++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999853 222222211  345778999999988877543      46


Q ss_pred             CCcEEEEcCcCCCc--CC--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||....  +.  ...++....+++|+.++..+++++     +.+.++||++||..+++..      ...|+.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------~~~Y~~  157 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN------RVPYSA  157 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC------CCccHH
Confidence            89999999986421  11  111122334578999887666644     2456799999998876321      234554


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|  .+++       .++...||++++|+||++++
T Consensus       158 sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  190 (260)
T PRK12823        158 AK--GGVNALTASLAFEYAEHGIRVNAVAPGGTEA  190 (260)
T ss_pred             HH--HHHHHHHHHHHHHhcccCcEEEEEecCccCC
Confidence            44  3333       33445699999999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.4e-22  Score=170.79  Aligned_cols=163  Identities=12%  Similarity=0.123  Sum_probs=114.5

Q ss_pred             CCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        80 ~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++|+++||||++  |||++++++|+++|++|++++|+.   +..+++...  .+....+.+|++|++++++++      
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--LGSDIVLPCDVAEDASIDAMFAELGKV   81 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc--cCCceEeecCCCCHHHHHHHHHHHHhh
Confidence            5789999999986  999999999999999999998873   223333222  234567899999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcCC--------CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 FEGVTHVICCTGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~--------~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                      ++++|++|||||......        ..++..+..+++|+.|+..+.+++.   ...++||++||.++..    +.+...
T Consensus        82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~----~~~~~~  157 (262)
T PRK07984         82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNYN  157 (262)
T ss_pred             cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC----CCCCcc
Confidence            568999999999753211        0111123345889999888887651   2337899999987652    233334


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|+     .+.+..++...||++++|.||++.
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~  193 (262)
T PRK07984        158 VMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR  193 (262)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCccc
Confidence            5665543     223334556679999999999874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=1.4e-22  Score=172.06  Aligned_cols=163  Identities=13%  Similarity=0.175  Sum_probs=113.9

Q ss_pred             CCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        80 ~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++|+++||||  ++|||++++++|+++|++|++..|+..   .++++..+.  .....+++|++|++++++++      
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999997  679999999999999999999877532   233332221  23457899999999988754      


Q ss_pred             hCCCcEEEEcCcCCCcCC--C------CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 FEGVTHVICCTGTTAFPS--R------RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~--~------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                      ++++|++|||||......  .      +++..+..+++|+.++..+.+++    +...++||++||.++..    +.+..
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----~~~~~  157 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----AIPNY  157 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc----CCCCc
Confidence            578999999999864210  0      11112234578999988887764    33347899999988763    22333


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|+     .+.+..++.++||+++.|+||++-
T Consensus       158 ~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~  194 (261)
T PRK08690        158 NVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIK  194 (261)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            45655543     223334566789999999999874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.6e-22  Score=171.42  Aligned_cols=164  Identities=12%  Similarity=0.081  Sum_probs=117.3

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+.   ++++++.+++  .....+++|++|++++++++     
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHHH
Confidence            3567999999997  8999999999999999999988874   3344443333  23557899999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|++|||||....     +  ..+.+..+..+++|+.++.++++++.   ...++||++||.++..    +.+...
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~----~~p~~~  160 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK----VMPHYN  160 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc----CCCcch
Confidence             5689999999997531     1  11122234566899999999988762   2347999999976652    233344


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++...||++++|+||++.
T Consensus       161 ~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~  196 (272)
T PRK08159        161 VMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIK  196 (272)
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcC
Confidence            5665443     223334556689999999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3e-22  Score=168.13  Aligned_cols=166  Identities=15%  Similarity=0.114  Sum_probs=121.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||+|+||.+++++|+++|++|++++|++++.+++.+.+. ..++.++++|++|++++++++      +++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3577899999999999999999999999999999999887766544322 345788999999999998653      357


Q ss_pred             CcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||......    ...+..+..+++|+.|+.++++.+     +.+.++||++||..++.    +......|+.+
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~y~~s  157 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR----PRPGLGWYNAS  157 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----CCCCchHHHHH
Confidence            899999999753211    111122345688999988888765     24668999999988874    33344556655


Q ss_pred             HHHH-----HHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYKK-----MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~-----~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |...     .+...+...++++++++||++.
T Consensus       158 k~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~  188 (251)
T PRK07231        158 KGAVITLTKALAAELGPDKIRVNAVAPVVVE  188 (251)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEECccC
Confidence            4321     1122334569999999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.8e-22  Score=170.05  Aligned_cols=166  Identities=15%  Similarity=0.114  Sum_probs=119.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+|+||++++++|+++|++|++++|++++.+...+.+.  ..++..+.+|++|.+++++++      ++
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999877655433221  346788999999998887643      46


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......    ...++.+..+++|+.++..+++++     +.+.+++|++||..++.+    ......|+.
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~----~~~~~~Y~~  159 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA----APKMSIYAA  159 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC----CCCCchhHH
Confidence            7899999999753211    112223445678999988777653     345579999999887742    333455665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     +.+..++...||++++|+||++-
T Consensus       160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~  191 (253)
T PRK06172        160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVID  191 (253)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence            5432     12223344568999999999873

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=1.9e-22  Score=169.38  Aligned_cols=162  Identities=14%  Similarity=0.151  Sum_probs=116.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEE-EecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~-~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      |.+|+++||||+|+||++++++|+++|++|++ .+|+.++.+++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999876 4788776655443321  346788999999999887654      35


Q ss_pred             CCcEEEEcCcCCCcCCCCCCC----CCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRWDG----DNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~----~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||...... .++.    ....+++|+.++.++++++     +.+.++||++||.....    +..+...|+.
T Consensus        82 ~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~y~~  156 (250)
T PRK08063         82 RLDVFVNNAASGVLRP-AMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR----YLENYTTVGV  156 (250)
T ss_pred             CCCEEEECCCCCCCCC-cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc----CCCCccHHHH
Confidence            7999999999754211 1111    1223578999999998876     24567999999977653    2233445554


Q ss_pred             HHHHHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                        +|.+++.+       +.+.|+++++|+||++.
T Consensus       157 --sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~  188 (250)
T PRK08063        157 --SKAALEALTRYLAVELAPKGIAVNAVSGGAVD  188 (250)
T ss_pred             --HHHHHHHHHHHHHHHHhHhCeEEEeEecCccc
Confidence              44444433       34579999999999875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.7e-22  Score=169.47  Aligned_cols=164  Identities=13%  Similarity=0.079  Sum_probs=119.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++. ++.+.+.  ..++.++++|++|++++++.+      ++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            57889999999999999999999999999999999988765 2222211  346788999999999887643      35


Q ss_pred             CCcEEEEcCcCCCcCCCCC--CCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~--~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      ++|+||||||.......+.  +.....+++|+.++.++.+++    +.+.++||++||..+..+    ......|+.+| 
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~sK-  157 (258)
T PRK08628         83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG----QGGTSGYAAAK-  157 (258)
T ss_pred             CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC----CCCCchhHHHH-
Confidence            7999999999753211111  122334588999998888765    334579999999887632    22334565444 


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                       ..++       .++...||+++.|+||.+++
T Consensus       158 -~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t  188 (258)
T PRK08628        158 -GAQLALTREWAVALAKDGVRVNAVIPAEVMT  188 (258)
T ss_pred             -HHHHHHHHHHHHHHhhcCeEEEEEecCccCC
Confidence             3333       33445799999999998864

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.7e-22  Score=174.05  Aligned_cols=169  Identities=11%  Similarity=0.033  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----------hhHhhhhCcCC--CCCeeEEEeeCCCccCcch
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----------EKATTLFGKQD--EETLQVCKGDTRNPKDLDP  146 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----------~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~  146 (250)
                      ++++|+++||||++|||++++++|+++|++|++++|+.          ++++++.+++.  ..++.++++|++|++++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            46789999999999999999999999999999999974          23333322221  2356789999999999886


Q ss_pred             hh------hCCCcEEEEcC-cCCCc---CCCCC----CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccc
Q 025619          147 AI------FEGVTHVICCT-GTTAF---PSRRW----DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       147 ~~------~~~~D~vi~~A-g~~~~---~~~~~----~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~  207 (250)
                      ++      ++++|++|||| |....   ....+    +...+.+++|+.++..+++++     +.+.++||++||..+..
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            54      57899999999 74311   01111    112234578999988887765     23457999999965532


Q ss_pred             cCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          208 FNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       208 ~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .. .+......|+.+|+     .+.+..++...||++++|+||++-
T Consensus       165 ~~-~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~  209 (305)
T PRK08303        165 NA-THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR  209 (305)
T ss_pred             cC-cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence            11 11122334665543     223345566789999999999874

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3e-22  Score=167.80  Aligned_cols=160  Identities=14%  Similarity=0.112  Sum_probs=117.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh---CCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~~D~vi~~  158 (250)
                      +++++||||+||||++++++|+++|++|++++|++++++++.+.  ..++.++++|++|.+++++++-   ..+|.+|||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~   78 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN   78 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence            36899999999999999999999999999999999887766543  2467889999999999887541   247999999


Q ss_pred             CcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHH---
Q 025619          159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE---  229 (250)
Q Consensus       159 Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e---  229 (250)
                      ||......   .+++..++.+++|+.|+.++++++.   ...+++|++||..+..    +.+....|+.+|  ..++   
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asK--~a~~~~~  152 (240)
T PRK06101         79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----ALPRAEAYGASK--AAVAYFA  152 (240)
T ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----CCCCCchhhHHH--HHHHHHH
Confidence            98643211   1111223456899999999999773   2346899999977653    222334555444  4333   


Q ss_pred             ----HHHHhcCCCEEEEecceEEe
Q 025619          230 ----DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ----~~~~~~gi~~~~vrPg~v~~  249 (250)
                          .+++..|+++++++||++.+
T Consensus       153 ~~l~~e~~~~gi~v~~v~pg~i~t  176 (240)
T PRK06101        153 RTLQLDLRPKGIEVVTVFPGFVAT  176 (240)
T ss_pred             HHHHHHHHhcCceEEEEeCCcCCC
Confidence                33456799999999998753

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.8e-22  Score=168.61  Aligned_cols=163  Identities=15%  Similarity=0.191  Sum_probs=115.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|+++||||+||||+++++.|+++|++|+++.+ +.++.+.+.+.. ..++.++++|++|++++++++      +++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            456789999999999999999999999999988755 455555444333 246788999999998887654      344


Q ss_pred             -CcEEEEcCcCCCc---------CCCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          152 -VTHVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       152 -~D~vi~~Ag~~~~---------~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                       +|++|||||....         ....+++..+.+++|+.++.++++++     +.+.++||++||.....    +..+.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~  156 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----PVVPY  156 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----CCCCc
Confidence             9999999986421         01111222345688999999999876     23567999999976542    33344


Q ss_pred             hHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|  .+.+       +++...||+++.|+||++-
T Consensus       157 ~~Y~~sK--~a~~~l~~~la~~~~~~~i~v~~i~pG~v~  193 (253)
T PRK08642        157 HDYTTAK--AALLGLTRNLAAELGPYGITVNMVSGGLLR  193 (253)
T ss_pred             cchHHHH--HHHHHHHHHHHHHhCccCeEEEEEeecccC
Confidence            5666544  3333       3334578999999999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3e-22  Score=169.11  Aligned_cols=168  Identities=15%  Similarity=0.100  Sum_probs=118.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+ .++++.+.+.  ..++..+++|++|++++++++      +
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999754 3333322221  346778999999999887643      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   .+.++.+..+++|+.|+..+++++     +.+.++||++||..+......  .....|+.
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~~~~Y~~  162 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG--LLQAHYNA  162 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--CCcchHHH
Confidence            67999999999864321   112223445689999998887765     245679999999887642211  11244554


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~  194 (254)
T PRK06114        163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYTA  194 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeecCcc
Confidence            443     222334455679999999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=2e-22  Score=169.86  Aligned_cols=166  Identities=16%  Similarity=0.079  Sum_probs=118.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++|+++||||+|+||++++++|+++|++|++++|++++.+....++.  ..+++++.+|++|++++++++      +++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999999887666543321  356788999999999887654      357


Q ss_pred             CcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||........   .+..+..+++|+.++.++++.+     +.+.++||++||..++.    +......|+.+|
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~----~~~~~~~y~~~k  157 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV----GSAGKAAYVSAK  157 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----CCCCcchhHHHH
Confidence            99999999976432111   1112234578999976666654     24678999999987763    233345555444


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..     +.+..++...++++++++||++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~  188 (258)
T PRK12429        158 HGLIGLTKVVALEGATHGVTVNAICPGYVDT  188 (258)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCcc
Confidence            31     111223445789999999999864

>PRK09242 tropinone reductase; Provisional

Probab=99.88  E-value=2.2e-22  Score=170.00  Aligned_cols=166  Identities=13%  Similarity=0.117  Sum_probs=121.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.++.+++.+++.    ..++.++.+|++|++++++++      
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766543321    346788999999998876543      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   ...++.+..+++|+.++.++++++     +.+.++||++||..+..+    ......|+
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~----~~~~~~Y~  161 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH----VRSGAPYG  161 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC----CCCCcchH
Confidence            568999999999753211   112223445688999999998876     245679999999887742    23334555


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...|++++.++||++.
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~  194 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIR  194 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCC
Confidence            4443     112223345679999999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-22  Score=168.97  Aligned_cols=164  Identities=12%  Similarity=0.111  Sum_probs=119.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+||||.+++++|+++|++|++++|+.++.+.+.+++.  ...+..+++|++|.+++++++      ++
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999877666544322  235678999999998887543      45


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......    ...+..+..+++|+.++..+++++     +.+.++||++||..+..    +......|+.
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~  160 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS----PGDFQGIYSI  160 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC----CCCCCcchHH
Confidence            7999999999643111    111122345688999998888765     24567999999987763    2333455664


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|  .+++       .++...||+++.|+||.+.
T Consensus       161 sK--~al~~~~~~l~~e~~~~gi~v~~i~PG~v~  192 (252)
T PRK07035        161 TK--AAVISMTKAFAKECAPFGIRVNALLPGLTD  192 (252)
T ss_pred             HH--HHHHHHHHHHHHHHhhcCEEEEEEeecccc
Confidence            44  4443       3344569999999999874

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.88  E-value=3.9e-22  Score=167.80  Aligned_cols=161  Identities=16%  Similarity=0.189  Sum_probs=117.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI  156 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~vi  156 (250)
                      |+++||||+||||.+++++|+++|++|++++|++++++.+.+.. ..+++++.+|++|.+++++++      ++++|+||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47999999999999999999999999999999998877655433 346788999999998887643      35799999


Q ss_pred             EcCcCCCcC----CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH-
Q 025619          157 CCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK-  226 (250)
Q Consensus       157 ~~Ag~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~-  226 (250)
                      ||||.....    ...+++....+++|+.|+..+++++     +.+.++||++||..+..    +......|+.+|... 
T Consensus        80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~~~~  155 (248)
T PRK10538         80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----PYAGGNVYGATKAFVR  155 (248)
T ss_pred             ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC----CCCCCchhHHHHHHHH
Confidence            999975311    1122223445688999977777655     24668999999987652    333445666554321 


Q ss_pred             ----HHHHHHHhcCCCEEEEecceEE
Q 025619          227 ----MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ----~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+..++...||++++|+||.+.
T Consensus       156 ~~~~~l~~~~~~~~i~v~~v~pg~i~  181 (248)
T PRK10538        156 QFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_pred             HHHHHHHHHhcCCCcEEEEEeCCeec
Confidence                1223344578999999999885

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3e-22  Score=167.31  Aligned_cols=165  Identities=18%  Similarity=0.210  Sum_probs=120.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++++++||||+|+||++++++|+++|++|++++|++++.++..+++.  ..++.++.+|++|++++.+++      +++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999999877655433222  346788999999999887653      358


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   ..+++.++.+++|+.++.++++++     +.+.+++|++||..++.+    ......|+.+|
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~sK  160 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG----AAVTSAYSASK  160 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC----CCCCcchHHHH
Confidence            999999999764221   112222445688999998888876     245689999999877643    22334565444


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..     ..+..++++.|+++++++||++.
T Consensus       161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~  190 (239)
T PRK07666        161 FGVLGLTESLMQEVRKHNIRVTALTPSTVA  190 (239)
T ss_pred             HHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence            31     22233445679999999999875

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-22  Score=171.65  Aligned_cols=162  Identities=17%  Similarity=0.221  Sum_probs=117.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------hC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++|++|||||+|+||++++++|+++|++|++++|++++.+++.+...    ..+++++.+|++|++++++ +      ++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            56899999999999999999999999999999999877665533221    2468889999999988764 3      46


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   .++...+.+++|+.|+.++++++    + .+.++||++||..+..+    ..+...|+.+
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----~~~~~~Y~~s  156 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG----FPGLSPYVSS  156 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC----CCCCchhHHh
Confidence            79999999997652211   11122334578999998888874    2 45689999999766532    2333455544


Q ss_pred             HHHHHHHHH-------HHhcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDF-------VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~-------~~~~gi~~~~vrPg~v~~  249 (250)
                        |...+.+       +.+.|+++++++||.+.+
T Consensus       157 --K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t  188 (280)
T PRK06914        157 --KYALEGFSESLRLELKPFGIDVALIEPGSYNT  188 (280)
T ss_pred             --HHHHHHHHHHHHHHhhhhCCEEEEEecCCccc
Confidence              4433322       345799999999998753

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.88  E-value=9.5e-22  Score=175.02  Aligned_cols=162  Identities=13%  Similarity=0.013  Sum_probs=118.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+|+||||||+|+||++++++|.++|++|++++|......  ...  ....+++.+|++|.+.+.++ +.++|+|||+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~--~~~--~~~~~~~~~Dl~d~~~~~~~-~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM--SED--MFCHEFHLVDLRVMENCLKV-TKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc--ccc--cccceEEECCCCCHHHHHHH-HhCCCEEEEccc
Confidence            5689999999999999999999999999999998643211  100  11356788999998887754 678999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------------CCcchhhHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------------LPWSIMNLFGVLKYKK  226 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------------~~~~~~~~y~~~k~k~  226 (250)
                      ...............++.|+.++.+++++++ .++++||++||..+|+...             .|..+.+.|+.  +|.
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~--sK~  172 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGL--EKL  172 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHH--HHH
Confidence            6531111111223345789999999999885 5789999999998886321             13445567764  555


Q ss_pred             HHHHH----HHhcCCCEEEEecceEEe
Q 025619          227 MGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.    .++.|++++++||+.+||
T Consensus       173 ~~E~~~~~~~~~~g~~~~ilR~~~vyG  199 (370)
T PLN02695        173 ATEELCKHYTKDFGIECRIGRFHNIYG  199 (370)
T ss_pred             HHHHHHHHHHHHhCCCEEEEEECCccC
Confidence            55544    455799999999999987

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.8e-22  Score=168.07  Aligned_cols=165  Identities=12%  Similarity=0.036  Sum_probs=115.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh--------
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI--------  148 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~--------  148 (250)
                      +++|+++||||+||||++++++|+++|++|++.. |+.++.++...++.  ...+..+.+|++|.++++..+        
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4678999999999999999999999999998875 55555554432221  345677899999987766432        


Q ss_pred             --hC--CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 --FE--GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 --~~--~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                        ++  ++|+||||||.......   ..+..+..+++|+.|+..+++++.   ...++||++||..+..    +.+....
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----SLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc----CCCCchh
Confidence              12  79999999997532111   111124455799999999998762   2346999999998873    2333456


Q ss_pred             HHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|..     +.+..++...||++++|+||++.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~  192 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIK  192 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCcc
Confidence            6655442     12223445679999999999885

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.88  E-value=3.2e-22  Score=167.96  Aligned_cols=165  Identities=13%  Similarity=0.084  Sum_probs=116.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.. +..+..... ..++.++++|++|.+++.+++      +++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            367899999999999999999999999999999999752 111111111 346788999999999887543      367


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||......   .+++..++.+++|+.++.++++++     +.+ .++||++||..++.+.    .....|+.+
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----~~~~~Y~~s  156 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG----IRVPSYTAS  156 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC----CCCchhHHH
Confidence            999999999864211   111122345689999999998876     233 5799999998877432    223355544


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |..     +.+..++..+||++++|+||++.
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~  187 (248)
T TIGR01832       157 KHGVAGLTKLLANEWAAKGINVNAIAPGYMA  187 (248)
T ss_pred             HHHHHHHHHHHHHHhCccCcEEEEEEECcCc
Confidence            431     12223344569999999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=4.9e-22  Score=167.70  Aligned_cols=167  Identities=11%  Similarity=0.060  Sum_probs=121.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++.+++      ++
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   87 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999999877666543322  345788999999998887643      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   ...+..+..+++|+.++.++.+++     +.+.++||++||..+..+    ......|+.+
T Consensus        88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~s  163 (256)
T PRK06124         88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA----RAGDAVYPAA  163 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC----CCCccHhHHH
Confidence            7899999999754211   111122345688999999988765     246689999999877632    2233456554


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     +.+..++...|++++.|+||++.+
T Consensus       164 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t  195 (256)
T PRK06124        164 KQGLTGLMRALAAEFGPHGITSNAIAPGYFAT  195 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEECCccC
Confidence            432     122234455699999999998753

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.88  E-value=3.3e-22  Score=174.62  Aligned_cols=166  Identities=16%  Similarity=0.138  Sum_probs=116.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCc--cCcchh--hhC--
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNP--KDLDPA--IFE--  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~--~~~~~~--~~~--  150 (250)
                      .|++++||||+||||++++++|+++|++|++++|++++++++.+++.    ..++..+.+|+++.  +.+++.  .++  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999998877654432    23567789999852  222211  134  


Q ss_pred             CCcEEEEcCcCCCcC-----CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++|++|||||.....     +.+++..+..+++|+.|+..+++++     +++.++||++||.+++...  +.+....|+
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~p~~~~Y~  209 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--SDPLYAVYA  209 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--CCccchHHH
Confidence            466999999986421     1112222346689999999888865     3467899999998875311  112245566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..+++..||++++++||++-
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~  242 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVA  242 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCcee
Confidence            5554     223335566789999999999985

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=4.6e-22  Score=167.97  Aligned_cols=162  Identities=17%  Similarity=0.170  Sum_probs=114.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|+++||||+||||++++++|+++|++|+++.|+.+ ..+++.+    .++.++++|++|++++++++      +++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999998876543 3333332    25788999999999888654      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .++++.+..+++|+.|+..+++++    + .+.++||++||..++...   ......|+.+|
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~---~~~~~~Y~asK  156 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA---AEGTTFYAITK  156 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC---CCCccHhHHHH
Confidence            999999999854211   112223445688999977766544    3 456799999998876421   12234566544


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceE
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      ..     +.+..++...||++++++||++
T Consensus       157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v  185 (255)
T PRK06463        157 AGIIILTRRLAFELGKYGIRVNAVAPGWV  185 (255)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCCC
Confidence            31     2223344567999999999987

>PLN02583 cinnamoyl-CoA reductase

Probab=99.88  E-value=1.4e-21  Score=169.00  Aligned_cols=163  Identities=23%  Similarity=0.284  Sum_probs=116.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.++  .......+.  ..+++++.+|++|.+++.++ +.++|.|+
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~-l~~~d~v~   83 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA-LKGCSGLF   83 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH-HcCCCEEE
Confidence            35789999999999999999999999999999996432  211111111  24688899999999998865 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccCccccc--CC----CC-----cchhh------
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF--NE----LP-----WSIMN------  217 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~~~~--~~----~~-----~~~~~------  217 (250)
                      |.++....   ........+++|+.|+.++++++. . ++++||++||.+++..  ..    .+     +.+..      
T Consensus        84 ~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  160 (297)
T PLN02583         84 CCFDPPSD---YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK  160 (297)
T ss_pred             EeCccCCc---ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence            98764321   111234567899999999999884 3 5789999999876421  10    01     11111      


Q ss_pred             -HHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          218 -LFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 -~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                       .|+  .+|..+|+.+    ++.|+++++|||++|||
T Consensus       161 ~~Y~--~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~G  195 (297)
T PLN02583        161 LWHA--LAKTLSEKTAWALAMDRGVNMVSINAGLLMG  195 (297)
T ss_pred             cHHH--HHHHHHHHHHHHHHHHhCCcEEEEcCCcccC
Confidence             355  5566666554    45699999999999987

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.3e-22  Score=167.31  Aligned_cols=165  Identities=15%  Similarity=0.171  Sum_probs=118.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+..+.. .......+..+++|++|++++++++      ++++
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999999999987643322 2222345678999999999887643      3579


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +++.....+++|+.|+.++++++.     .+.++||++||..+..    +......|+.+|.
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~  166 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV----ALERHVAYCASKA  166 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc----CCCCCchHHHHHH
Confidence            999999997642211   111223456889999999998762     3568999999987653    2223345655443


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     +.+..++...|++++.|+||++.
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~  195 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVL  195 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCc
Confidence            1     22223445579999999999874

>PRK06194 hypothetical protein; Provisional

Probab=99.87  E-value=7.3e-22  Score=169.46  Aligned_cols=164  Identities=13%  Similarity=0.081  Sum_probs=117.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++.  ..++.++.+|++|.+++++++      ++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999999876665543322  345778999999999887653      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCC------CeEEEEccCcccccCCCCcchh
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSL------KRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~------~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                      ++|+||||||......   ...+.....+++|+.|+.++++++     +.+.      ++||++||.+++.+    .+..
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----~~~~  158 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA----PPAM  158 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----CCCC
Confidence            7999999999865321   111222334689999999977764     2222      68999999888743    2334


Q ss_pred             hHHHHHHHHHHHHHH-------HH--hcCCCEEEEecceEE
Q 025619          217 NLFGVLKYKKMGEDF-------VQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~k~~~e~~-------~~--~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|.  .++.+       +.  ..+++++.+.||++.
T Consensus       159 ~~Y~~sK~--a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~  197 (287)
T PRK06194        159 GIYNVSKH--AVVSLTETLYQDLSLVTDQVGASVLCPYFVP  197 (287)
T ss_pred             cchHHHHH--HHHHHHHHHHHHHhhcCCCeEEEEEEeCccc
Confidence            55665543  33322       22  246899999999873

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.87  E-value=3.8e-22  Score=168.68  Aligned_cols=163  Identities=13%  Similarity=0.097  Sum_probs=116.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +|++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.    ..++.++.+|++|.+++.+++      +++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999999999999999999999876655433221    245889999999998887643      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|++|||||......   ..++..+..+++|+.|+.++++++     +.+ .++||++||..+..+    ......|+.+
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~s  157 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG----SKHNSGYSAA  157 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC----CCCCchhHHH
Confidence            999999999764221   111122344588999988888765     234 469999999765421    1223456655


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.     +.+..++.+.||++++++||.++
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~v~~v~pg~~~  188 (259)
T PRK12384        158 KFGGVGLTQSLALDLAEYGITVHSLMLGNLL  188 (259)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCcc
Confidence            542     22334445689999999999764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=4.3e-22  Score=168.43  Aligned_cols=168  Identities=18%  Similarity=0.134  Sum_probs=120.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.++++...+.+.  ..++.++++|++|++++++++      ++
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999887665543322  346778999999999886543      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc------CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~------~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   ..++.....+++|+.++.++++++.      ++.++||++||..++........+...|+.
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~  168 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNT  168 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHH
Confidence            7999999999753211   1111223455799999999998762      256799999998766432211122345554


Q ss_pred             HHHHHHHHH-------HHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                        +|..++.       .+...|+++++++||++-
T Consensus       169 --sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~  200 (259)
T PRK08213        169 --SKGAVINFTRALAAEWGPHGIRVNAIAPGFFP  200 (259)
T ss_pred             --HHHHHHHHHHHHHHHhcccCEEEEEEecCcCC
Confidence              4444433       334568999999999873

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.87  E-value=4.8e-22  Score=168.75  Aligned_cols=158  Identities=16%  Similarity=0.136  Sum_probs=116.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.+       ..++..+++|++|++++++++      ++++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999999876542       236778999999999887643      4689


Q ss_pred             cEEEEcCcCCCcCC------------CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcch
Q 025619          153 THVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       153 D~vi~~Ag~~~~~~------------~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                      |+||||||......            ...++.+..+++|+.|+..+++++.     .+.++||++||..+..+    ...
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~  154 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG----SEG  154 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC----CCC
Confidence            99999999753210            0111113356889999999988762     34578999999887642    223


Q ss_pred             hhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceE
Q 025619          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       216 ~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      ...|+.+|..     +.+..++...||++++|+||++
T Consensus       155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~  191 (266)
T PRK06171        155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGIL  191 (266)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccc
Confidence            3456554431     2223444567999999999987

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.87  E-value=6.2e-22  Score=172.48  Aligned_cols=167  Identities=16%  Similarity=0.140  Sum_probs=117.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|+++||||++|||.+++++|+++| ++|++++|+.++.+++.+++.  ...+.++.+|++|.+++++++      +++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999 999999999887766554432  245778899999999887654      367


Q ss_pred             CcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCcccccC-----------
Q 025619          152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKFN-----------  209 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~~-----------  209 (250)
                      +|++|||||......    .+.+..+..+++|+.|+..+++++    + .+  .++||++||..++...           
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999753111    111223445689999988887765    2 22  4799999998775310           


Q ss_pred             ------------------CCCcchhhHHHHHHHHHH-----HHHHHH-hcCCCEEEEecceE
Q 025619          210 ------------------ELPWSIMNLFGVLKYKKM-----GEDFVQ-KSGLPFTIISLCIY  247 (250)
Q Consensus       210 ------------------~~~~~~~~~y~~~k~k~~-----~e~~~~-~~gi~~~~vrPg~v  247 (250)
                                        ..++.+...|+.+|....     +.+.+. ..|+++++|+||+|
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v  223 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCI  223 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcc
Confidence                              011233445665554211     112222 35899999999987

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.87  E-value=1e-21  Score=167.09  Aligned_cols=168  Identities=19%  Similarity=0.165  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+.+|+++||||++|||+++|++|++.|++|++++|+.+++++....+.     ..++..+.+|+++.+++++++     
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988766543321     345888999999988777644     


Q ss_pred             --hCCCcEEEEcCcCCCcCCCCCC----CCCCcceehHHH-HHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 --FEGVTHVICCTGTTAFPSRRWD----GDNTPEKVDWEG-VRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~~N~~g-~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                        ++++|++|||||........++    ..+..+++|+.| ...+.+++     +.+.+.|+++||.++......   ..
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~---~~  161 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG---SG  161 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC---Cc
Confidence              5789999999998764322222    234566889996 55555555     235678999999888743211   11


Q ss_pred             hHHHHHH-----HHHHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLK-----YKKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k-----~k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|     ..+.+..++..+|||+++|.||.|.+
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T  199 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKT  199 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeC
Confidence            4555444     34556677788999999999998753

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.9e-22  Score=166.26  Aligned_cols=162  Identities=18%  Similarity=0.170  Sum_probs=118.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++|+++||||+|+||++++++|+++|++|++++|++++.+.+.+.+.  ..++.++.+|++|.+++.+++      ++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999999999999877665543221  346788999999999887643      3579


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.+..+..+++|+.++.++++++     +.+.++||++||..++.+    ......|+.+| 
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~sK-  159 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA----FPQWGAYCVSK-  159 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC----CCCccHHHHHH-
Confidence            99999999754211   111222344578999988888765     245689999999987742    23334565444 


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                       ...+       .+++..|+++++|+||++-
T Consensus       160 -~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~  189 (241)
T PRK07454        160 -AALAAFTKCLAEEERSHGIRVCTITLGAVN  189 (241)
T ss_pred             -HHHHHHHHHHHHHhhhhCCEEEEEecCccc
Confidence             3333       3345679999999999874

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.87  E-value=1.4e-21  Score=168.86  Aligned_cols=169  Identities=20%  Similarity=0.160  Sum_probs=124.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++.+++++||||++|||.++|++|+.+|++|++.+|+.++.++..+.+.    ...+.++++|++|.+++++++      
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999999999999977766654432    456788999999999998754      


Q ss_pred             hCCCcEEEEcCcCCCcCCC-CCCCCCCcceehHHHHHHHHHHc----cC-CCCeEEEEccCccccc--------CCCC-c
Q 025619          149 FEGVTHVICCTGTTAFPSR-RWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGVTKF--------NELP-W  213 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~-~~~~~~~~~~~N~~g~~~l~~a~----~~-~~~~iV~iSS~~~~~~--------~~~~-~  213 (250)
                      ..++|++|||||++..+.. ..+..+..+.+|+.|++.+.+.+    +. ...|||++||..+...        +... +
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~  191 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY  191 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence            4579999999999875542 22345777899999988888766    32 2389999999886110        0111 2


Q ss_pred             chhhHHHHHHHHH-----HHHHHHHhcCCCEEEEecceEE
Q 025619          214 SIMNLFGVLKYKK-----MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       214 ~~~~~y~~~k~k~-----~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .....|+.+|...     ++.+.+++ ||.++.++||.+.
T Consensus       192 ~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~  230 (314)
T KOG1208|consen  192 SSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVK  230 (314)
T ss_pred             cchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCccc
Confidence            2223455544322     11222233 8999999999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.9e-22  Score=167.57  Aligned_cols=161  Identities=17%  Similarity=0.166  Sum_probs=117.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+++..+.+.+++.  ..++..+.+|++|.+++++++      ++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3578899999999999999999999999999999999876555433221  235678899999998887543      35


Q ss_pred             CCcEEEEcCcCCCcC------CCCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          151 GVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++|+||||||.....      ..+++...+.+++|+.++.++++++.     .+.++||++||..++.+       .+.|
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~Y  155 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------SNFY  155 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-------cccc
Confidence            799999999975311      11222233456899999999988762     34679999999887632       2455


Q ss_pred             HHHHHHHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          220 GVLKYKKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                      +.+  |.+.+.+       +...|+++++++||.+.
T Consensus       156 ~~s--K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~  189 (250)
T PRK07774        156 GLA--KVGLNGLTQQLARELGGMNIRVNAIAPGPID  189 (250)
T ss_pred             HHH--HHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence            544  4444332       33458999999999874

>PLN02686 cinnamoyl-CoA reductase

Probab=99.87  E-value=1.3e-21  Score=173.97  Aligned_cols=167  Identities=18%  Similarity=0.216  Sum_probs=120.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-------CCCCeeEEEeeCCCccCcchhhhCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAIFEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~Dl~d~~~~~~~~~~~  151 (250)
                      .+++|+||||||+|+||++++++|+++|++|+++.|+.++.+.+.+..       ...+++++.+|++|.+++.++ +.+
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~-i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEA-FDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHH-HHh
Confidence            467899999999999999999999999999999999876554432110       013578899999999999875 678


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccCc--cccc---CC-------C------
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVG--VTKF---NE-------L------  211 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~--~~~~---~~-------~------  211 (250)
                      +|+|||+|+....... ........++|+.++.+++++++ . +++++|++||..  +|+.   ..       .      
T Consensus       129 ~d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        129 CAGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             ccEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            9999999987542211 01112345789999999999985 3 789999999963  3321   11       0      


Q ss_pred             -CcchhhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          212 -PWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       212 -~~~~~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                       +..+.+.|+  .+|..+|+++    ++.|++++++||+.|||
T Consensus       208 ~~~~p~~~Y~--~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyG  248 (367)
T PLN02686        208 FCRDNKLWYA--LGKLKAEKAAWRAARGKGLKLATICPALVTG  248 (367)
T ss_pred             hcccccchHH--HHHHHHHHHHHHHHHhcCceEEEEcCCceEC
Confidence             111233566  4555566544    45799999999999997

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=5.1e-22  Score=168.52  Aligned_cols=163  Identities=12%  Similarity=0.097  Sum_probs=115.3

Q ss_pred             CCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecC---hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        80 ~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~---~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++|+++||||  ++|||++++++|+++|++|++++|.   .++++++.++.  .....+++|++|++++++++      
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHHHH
Confidence            56899999996  6899999999999999999988654   34444443332  22346889999999998754      


Q ss_pred             hCCCcEEEEcCcCCCcC--------CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 FEGVTHVICCTGTTAFP--------SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~--------~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                      ++++|++|||||.....        ..+.++.+..+++|+.|+..+++++.   ...++||++||..+..    +.+...
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~----~~~~~~  157 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----VVPNYN  157 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc----CCCCcc
Confidence            57899999999975321        01112223456899999988888652   2347899999987752    233344


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|+     .+.+..++..+||+++.|.||++-
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~  193 (260)
T PRK06997        158 TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIK  193 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence            5665554     223334556689999999999874

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.87  E-value=5.9e-22  Score=167.24  Aligned_cols=165  Identities=11%  Similarity=0.040  Sum_probs=116.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .++++|+++||||+||||++++++|+++|++|++++|+...  .+.+.+ . ..++..+++|++|.+++++++      +
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-L-GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-c-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35788999999999999999999999999999988775421  122221 1 345778999999998887654      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|++|||||......   ...++.++.+++|+.++.++++++     +++ .++||++||..++.+.    .....|+
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~~Y~  159 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG----IRVPSYT  159 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC----CCCcchH
Confidence            68999999999754211   112233456689999999888875     222 3689999998877432    2223555


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++.+.||+++.|+||++-
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~  192 (253)
T PRK08993        160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMA  192 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence            4443     112223445679999999999974

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.87  E-value=3.3e-22  Score=173.08  Aligned_cols=148  Identities=17%  Similarity=0.108  Sum_probs=114.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~Ag~  161 (250)
                      |+||||||+|+||++++++|+++| +|++++|...               .+.+|++|.+.+++++-+ ++|+|||+|+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            479999999999999999999999 7888887531               245899999998875322 68999999998


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHHh
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      ..... ...+++..+++|+.|+.+++++++....++|++||..+|+..       +.+..|.+.|+  ++|...|++++.
T Consensus        65 ~~~~~-~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg--~sK~~~E~~~~~  141 (299)
T PRK09987         65 TAVDK-AESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG--ETKLAGEKALQE  141 (299)
T ss_pred             CCcch-hhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCCCCCCCCCHHH--HHHHHHHHHHHH
Confidence            65322 222334445799999999999995433589999999988632       22334556666  678888998888


Q ss_pred             cCCCEEEEecceEEe
Q 025619          235 SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ~gi~~~~vrPg~v~~  249 (250)
                      ...+++++||+++||
T Consensus       142 ~~~~~~ilR~~~vyG  156 (299)
T PRK09987        142 HCAKHLIFRTSWVYA  156 (299)
T ss_pred             hCCCEEEEecceecC
Confidence            778899999999997

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.9e-22  Score=165.95  Aligned_cols=162  Identities=14%  Similarity=0.159  Sum_probs=117.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +|+++||||+||||++++++|+++|++|++++|++++.+++.+.+.    ..+++++++|++|++++.+++      +++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999999887766543221    346788999999998887643      468


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|++|||||.......   .++..+..+++|+.++.++++++     +.+.++||++||..+.....   .+...|+.+|
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---~~~~~Y~~sK  158 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP---GVKAAYAASK  158 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC---CCcccHHHHH
Confidence            9999999998643221   11122335588999998888865     24678999999987653211   1234565444


Q ss_pred             HHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          224 YKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                        .+++       ..+...++++++++||++.
T Consensus       159 --~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~  188 (248)
T PRK08251        159 --AGVASLGEGLRAELAKTPIKVSTIEPGYIR  188 (248)
T ss_pred             --HHHHHHHHHHHHHhcccCcEEEEEecCcCc
Confidence              4333       2333468999999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.87  E-value=7.2e-22  Score=166.78  Aligned_cols=166  Identities=10%  Similarity=0.076  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+|+||||+||||++++++|+++|++|++++|+.+..+.+.+++.  ..++.++.+|++|.+++++++      ++
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998877655433221  345778899999999887643      46


Q ss_pred             CCcEEEEcCcCCCcCCC--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      ++|+||||||.......  .++..+..+++|+.++.++++++     +.+.++||++||..+..    +......|+.+|
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK  163 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASSK  163 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC----CCCCcchhHHHH
Confidence            79999999997542211  11222334688999999999876     23456999999988763    223334566544


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..     +.+..++...||++++++||++.
T Consensus       164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~  193 (255)
T PRK06113        164 AAASHLVRNMAFDLGEKNIRVNGIAPGAIL  193 (255)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEeccccc
Confidence            32     12223445579999999999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.7e-21  Score=162.19  Aligned_cols=163  Identities=8%  Similarity=-0.006  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.  ..++..+.+|++|++++++++      ++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999988776544322  345677889999999988644      46


Q ss_pred             -CCcEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHH
Q 025619          151 -GVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       151 -~~D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                       ++|++|||||....+..    +++...+.+++|+.++..+++.+    + .+ .++||++||..+..       ....|
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-------~~~~Y  154 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-------DLTGV  154 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-------Ccchh
Confidence             89999999985432211    11111224466888877666543    2 32 57999999975541       12345


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|.     .+.+..++..+||+++.|+||++.
T Consensus       155 ~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~  188 (227)
T PRK08862        155 ESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFS  188 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCc
Confidence            54443     223345566789999999999874

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.87  E-value=1e-21  Score=164.85  Aligned_cols=166  Identities=16%  Similarity=0.138  Sum_probs=119.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.+++.+.+.  ..+++++++|++|.+++++++      +++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999877665433221  346888999999999888653      357


Q ss_pred             CcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||........   .+..+..+++|+.++.++++++     +.+.++||++||..++...    .....|+.+|
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~----~~~~~Y~~sK  156 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS----SGEAVYAACK  156 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC----CCCchHHHHH
Confidence            99999999975422111   1112334688999999988866     3456899999998887432    2234566544


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..     +.+...+...++++++++||++++
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~  187 (250)
T TIGR03206       157 GGLVAFSKTMAREHARHGITVNVVCPGPTDT  187 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEecCcccc
Confidence            31     112223334699999999998853

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.87  E-value=1.8e-21  Score=171.79  Aligned_cols=164  Identities=17%  Similarity=0.164  Sum_probs=116.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~  158 (250)
                      ++||||||+|+||++++++|+++|++ |+++++..  ...+.+.......+++++.+|++|.+++.+++- .++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            37999999999999999999999986 55555432  122222211113457789999999999987532 259999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC----------CCCeEEEEccCcccccC-----------------CC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKFN-----------------EL  211 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~----------~~~~iV~iSS~~~~~~~-----------------~~  211 (250)
                      ||.... ...+...+..+++|+.|+.+++++++.          +.+++|++||..+|+..                 +.
T Consensus        81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            997542 222334566789999999999998842          35689999999888631                 12


Q ss_pred             CcchhhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          212 PWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       212 ~~~~~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +..+.+.|+  .+|.++|.++    +..|++++++||+.|||
T Consensus       160 ~~~p~~~Y~--~sK~~~E~~~~~~~~~~g~~~vilr~~~v~G  199 (352)
T PRK10084        160 AYAPSSPYS--ASKASSDHLVRAWLRTYGLPTIVTNCSNNYG  199 (352)
T ss_pred             CCCCCChhH--HHHHHHHHHHHHHHHHhCCCEEEEeccceeC
Confidence            334556666  4555555444    45699999999999987

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.2e-22  Score=166.49  Aligned_cols=166  Identities=13%  Similarity=0.045  Sum_probs=119.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh--hCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI--FEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~--~~~~D  153 (250)
                      .+++|+++||||+|+||++++++|+++|++|++++|++++.+.+.+++.   ..++.++.+|++|++++++++  ++++|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999999887766543322   345788999999999887654  56899


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      ++|||||......   ..++.....+++|+.++.++++++    + .+.++||++||..+..    +......|+.+|. 
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~y~ask~a  159 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN----PDADYICGSAGNAA  159 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC----CCCCchHhHHHHHH
Confidence            9999999753211   111122345688999998888865    2 3457899999987653    2223334443332 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+.+..++...||+++.|+||++.
T Consensus       160 l~~~~~~la~e~~~~gi~v~~i~PG~v~  187 (259)
T PRK06125        160 LMAFTRALGGKSLDDGVRVVGVNPGPVA  187 (259)
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccc
Confidence                122223445679999999999874

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.87  E-value=8.8e-22  Score=165.19  Aligned_cols=163  Identities=17%  Similarity=0.182  Sum_probs=118.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++++++.+++ ..++.++++|++|.+++.+.+      ++++|
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            56789999999999999999999999999999999987766654433 346778999999988776432      46899


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      +||||||......   ..++..+..+++|+.++.++++++.   ...+++|++||..+..+    .+....|+.+|  .+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~----~~~~~~Y~~sK--~a  156 (249)
T PRK06500         83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG----MPNSSVYAASK--AA  156 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC----CCCccHHHHHH--HH
Confidence            9999999764221   1112234466899999999999873   23467888888665421    22345566444  44


Q ss_pred             HHHH-------HHhcCCCEEEEecceEEe
Q 025619          228 GEDF-------VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~-------~~~~gi~~~~vrPg~v~~  249 (250)
                      .+.+       +...|+++++++||.+.+
T Consensus       157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t  185 (249)
T PRK06500        157 LLSLAKTLSGELLPRGIRVNAVSPGPVQT  185 (249)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcCCC
Confidence            4333       345699999999998753

>PRK06484 short chain dehydrogenase; Validated

Probab=99.87  E-value=5.9e-22  Score=183.58  Aligned_cols=165  Identities=17%  Similarity=0.179  Sum_probs=123.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ...+|++|||||+||||++++++|+++|++|++++|++++++++.++. ..++..+.+|++|++++++++      ++++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            347899999999999999999999999999999999988877766544 345677899999999888654      4689


Q ss_pred             cEEEEcCcCCCc--CC--CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          153 THVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       153 D~vi~~Ag~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      |+||||||....  +.  .+.+..+..+++|+.|+.++++++.   .+.++||++||.++..    +.+....|+.+|..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKaa  420 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL----ALPPRNAYCASKAA  420 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC----CCCCCchhHHHHHH
Confidence            999999997531  11  1112234456899999999988762   3447999999998873    33344566655442


Q ss_pred             -----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 -----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 -----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           +.+..++.+.||++++|+||++.
T Consensus       421 l~~l~~~la~e~~~~gI~vn~v~PG~v~  448 (520)
T PRK06484        421 VTMLSRSLACEWAPAGIRVNTVAPGYIE  448 (520)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence                 22234455679999999999874

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6e-22  Score=166.99  Aligned_cols=163  Identities=16%  Similarity=0.125  Sum_probs=117.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      +|+++||||+||||++++++|+++|++|++++|+.++++++.+.+.  ..++.++++|++|++++++++      ++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            4799999999999999999999999999999999877666543322  346788999999999887644      46899


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +||||||......   .+.+..+..+++|+.|+.++++++     +.+ .++||++||..+..+.    .....|+.+|.
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----~~~~~Y~~sKa  156 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----PGVIHSAAAKA  156 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----CCCcchHHHHH
Confidence            9999998643211   111122446689999999999876     222 4789999998776321    22234554443


Q ss_pred             -----HHHHHHHHH-hcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQ-KSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~-~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++. ++|+++++|+||++.
T Consensus       157 a~~~~~~~la~e~~~~~gi~v~~v~PG~v~  186 (252)
T PRK07677        157 GVLAMTRTLAVEWGRKYGIRVNAIAPGPIE  186 (252)
T ss_pred             HHHHHHHHHHHHhCcccCeEEEEEeecccc
Confidence                 122223333 469999999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.87  E-value=6.5e-22  Score=155.57  Aligned_cols=166  Identities=17%  Similarity=0.153  Sum_probs=128.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .++.|.++||||++|||++++..|++.|++|.+.+++.+..++....+.. .+...+.||+++..+++..+      ++.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999999999999999888887776654 35567899999998887633      678


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-------cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-------PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-------~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||+.....   +..++++..+.+|+.|++.+.+++       +.+..+||++||+-+...+    .....|+.
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN----~GQtnYAA  166 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN----FGQTNYAA  166 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc----ccchhhhh
Confidence            999999999976321   222334456689999999888865       1233499999998776321    22345555


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+.+++...+||++.|.||++-
T Consensus       167 sK~GvIgftktaArEla~knIrvN~VlPGFI~  198 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARELARKNIRVNVVLPGFIA  198 (256)
T ss_pred             hcCceeeeeHHHHHHHhhcCceEeEecccccc
Confidence            553     566778999999999999999874

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=166.11  Aligned_cols=166  Identities=17%  Similarity=0.165  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh-----hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI-----FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~-----~~~~  152 (250)
                      ++++++++||||+||||.+++++|+++|++|++++|++++++.+.+++. ..++.++.+|++|.+++++++     ++++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999999999887766544322 346888999999998877543     3679


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.+.....+++|+.|+.++++++     +.+.+++|++||..+..+    ......|+.+|.
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~sK~  157 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG----YPGYASYCASKF  157 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC----CCCccHHHHHHH
Confidence            999999997643211   11122345579999999998876     234578999999776532    223345665544


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     +.+..++...|++++.+.||++.
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~  186 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATR  186 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            2     12223444678999999999874

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.4e-22  Score=170.67  Aligned_cols=162  Identities=12%  Similarity=0.077  Sum_probs=116.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh---------hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI  148 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~---------~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~  148 (250)
                      +++|+++||||++|||++++++|+++|++|++++|+.         ++++++.+++.  ..++.++.+|++|.+++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5789999999999999999999999999999998865         44444433322  345778899999999887644


Q ss_pred             ------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-C---C---CCeEEEEccCccccc
Q 025619          149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-S---S---LKRIVLVSSVGVTKF  208 (250)
Q Consensus       149 ------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~---~---~~~iV~iSS~~~~~~  208 (250)
                            ++++|+||||||......   .+.++....+++|+.|+..+++++    + .   +   .++||++||..+.. 
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-  162 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ-  162 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc-
Confidence                  578999999999864211   111223445689999988888765    1 1   1   26899999987763 


Q ss_pred             CCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecc
Q 025619          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLC  245 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg  245 (250)
                         +......|+.+|.     .+.+..++...||++++|+||
T Consensus       163 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        163 ---GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence               2223345665553     223335556789999999998

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=165.05  Aligned_cols=157  Identities=14%  Similarity=0.184  Sum_probs=115.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++..      ...++.++++|++|++++++++      ++++
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETV------DGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhh------cCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999876511      1346788999999998887654      3678


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc------CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~------~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   ...+..+..+++|+.++..+++++.      .+.++||++||..+..    +.+....|+.+ 
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~s-  151 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR----PSPGTAAYGAA-  151 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC----CCCCCchhHHH-
Confidence            99999999754211   1111223456889999999998762      2457999999988763    22334455544 


Q ss_pred             HHHHHHHHH-------HhcCCCEEEEecceEE
Q 025619          224 YKKMGEDFV-------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e~~~-------~~~gi~~~~vrPg~v~  248 (250)
                       |..++.+.       ... |+++.++||++.
T Consensus       152 -K~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~  181 (252)
T PRK07856        152 -KAGLLNLTRSLAVEWAPK-VRVNAVVVGLVR  181 (252)
T ss_pred             -HHHHHHHHHHHHHHhcCC-eEEEEEEecccc
Confidence             44444332       234 999999999874

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.87  E-value=6.9e-22  Score=168.30  Aligned_cols=162  Identities=13%  Similarity=0.110  Sum_probs=117.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      |+++||||+||||++++++|+++|++|++++|+.++++++.+++.  +.++.++++|++|++++++++      ++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999999887665543322  346788999999998887643      357999


Q ss_pred             EEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       155 vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      ||||||.......   ..+..+..+++|+.++.++++++     +.+.++||++||..+..    +......|+.+|.. 
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~~~~~~Y~~sKaa~  156 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM----QGPAMSSYNVAKAGV  156 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC----CCCCchHHHHHHHHH
Confidence            9999997642211   11112334578999988877764     34568999999988774    23334566654431 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          +.+..++...||++++++||++.
T Consensus       157 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~  183 (270)
T PRK05650        157 VALSETLLVELADDEIGVHVVCPSFFQ  183 (270)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCccc
Confidence                22334445579999999999984

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.8e-22  Score=166.81  Aligned_cols=164  Identities=12%  Similarity=0.089  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||.+++++|+++|++|++++|++++.+++.+.+.  ..++.++.+|++|++++.+++      ++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887666543322  346788999999999887643      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc------CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~------~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   ...+.....+++|+.++.++++++.      .+.++||++||..+..    +......|+.
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~~  162 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----AGRGFAAYGT  162 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC----CCCCCchhHH
Confidence            8999999999753211   1112234456889999999999872      3567999999987763    2334456665


Q ss_pred             HHHHHHHHHHHH------hcCCCEEEEecceEE
Q 025619          222 LKYKKMGEDFVQ------KSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e~~~~------~~gi~~~~vrPg~v~  248 (250)
                      +|  ..++.+.+      ..+++++.|+||++.
T Consensus       163 sK--~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~  193 (263)
T PRK07814        163 AK--AALAHYTRLAALDLCPRIRVNAIAPGSIL  193 (263)
T ss_pred             HH--HHHHHHHHHHHHHHCCCceEEEEEeCCCc
Confidence            54  44433322      136999999999874

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.1e-22  Score=168.61  Aligned_cols=164  Identities=16%  Similarity=0.224  Sum_probs=118.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|++|||||+|+||++++++|+++|++|++++|++++.+...+.+.    ..++.++++|++|++++++.+      
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999999876655433221    246788999999998887643      


Q ss_pred             hCCCcEEEEcCcCCCcC--C--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 FEGVTHVICCTGTTAFP--S--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~--~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++++|+||||||.....  .  .+++.....+++|+.++.++++++     +.+.++||++||..++.+    .+....|
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y  159 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT----HRWFGAY  159 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC----CCCCcch
Confidence            35899999999965311  1  111122345578999999998865     234579999999887642    2233455


Q ss_pred             HHHHHHHHHHHHH-------HhcCCCEEEEecceEE
Q 025619          220 GVLKYKKMGEDFV-------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k~~~e~~~-------~~~gi~~~~vrPg~v~  248 (250)
                      +.  +|..++.+.       ...++++++|+||++.
T Consensus       160 ~~--sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~  193 (276)
T PRK05875        160 GV--TKSAVDHLMKLAADELGPSWVRVNSIRPGLIR  193 (276)
T ss_pred             HH--HHHHHHHHHHHHHHHhcccCeEEEEEecCccC
Confidence            54  444444333       3468999999999874

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-21  Score=163.26  Aligned_cols=167  Identities=19%  Similarity=0.195  Sum_probs=119.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+|+||++++++|+++|++|++++|++++..+..+.+.....+.+.+|++|.+++++++      ++++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            3578999999999999999999999999999999998876554433332345778899999998887543      4579


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+|||+||......   ...+.....+++|+.++.++++++     +.+.++||++||..++...    .....|+.+|.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~y~~sk~  159 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG----PGMGAYAAAKA  159 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC----CCcchhHHHHH
Confidence            99999999754211   111112334578999999988876     2467899999999887432    23345554432


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     ....+.+.+.++++++++||++++
T Consensus       160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~  189 (239)
T PRK12828        160 GVARLTEALAAELLDRGITVNAVLPSIIDT  189 (239)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence            1     112233345799999999999864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=1.5e-21  Score=165.23  Aligned_cols=164  Identities=16%  Similarity=0.166  Sum_probs=116.8

Q ss_pred             CCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|+++||||  ++|||.+++++|+++|++|++++|+.  +..+++.+++. ..+.++++|++|++++++++      
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            367899999999  89999999999999999999998764  34455444332 35678999999999888654      


Q ss_pred             hCCCcEEEEcCcCCCc-------CCCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|++|||||....       ...++++..+.+++|+.|+..+++++.   ...++||++|+....     +++....
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-----~~~~~~~  157 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-----AWPAYDW  157 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-----cCCccch
Confidence            4789999999998631       111222333456899999888887652   123689999865422     2233345


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++...||++++|+||++.
T Consensus       158 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  192 (256)
T PRK07889        158 MGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIR  192 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCccc
Confidence            555543     233445566789999999999874

>PRK12743 oxidoreductase; Provisional

Probab=99.87  E-value=8.9e-22  Score=166.36  Aligned_cols=165  Identities=13%  Similarity=0.115  Sum_probs=116.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|+++||||+||||++++++|+++|++|+++.| +.+..+.+.+++.  ..+++++.+|++|.+++++++      +++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999999999999988865 4444444333221  346888999999999887643      467


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||......   ..++.....+++|+.++.++++++.     ++ .++||++||.....    +..+...|+.+
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----~~~~~~~Y~~s  156 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT----PLPGASAYTAA  156 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC----CCCCcchhHHH
Confidence            999999999864211   1112234456889999999998762     22 46999999987652    33344566654


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     +.+...+...||+++.|+||++.+
T Consensus       157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t  188 (256)
T PRK12743        157 KHALGGLTKAMALELVEHGILVNAVAPGAIAT  188 (256)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccC
Confidence            431     122234456799999999998753

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-21  Score=166.94  Aligned_cols=164  Identities=15%  Similarity=0.115  Sum_probs=117.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+||||.+++++|+++|++|++++|+++.++...+.+.  ..++.++.+|++|++++++++      ++
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999999877655432221  235678899999999887643      45


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      ++|+||||||......   .+.+.....+++|+.|+.++++++.    +..++||++||..+..    +.+....|+.  
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~----~~~~~~~Y~a--  159 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV----PMPMQAHVCA--  159 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc----CCCCccHHHH--
Confidence            7999999998643211   1111223345799999999988762    2337999999987753    2233345554  


Q ss_pred             HHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          224 YKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..++       .++...|++++.++||++.
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~  191 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIA  191 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            444333       3344578999999999874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.87  E-value=1.1e-21  Score=164.61  Aligned_cols=168  Identities=15%  Similarity=0.129  Sum_probs=120.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.++..+..+.+.  ..++.++.+|++|.+++++++      ++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999999999999776554433222  245888999999999888753      35


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   ..++....+++|+.++.++++++     +.+.++||++||..++.   .+......|+.+
T Consensus        83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---~~~~~~~~y~~s  159 (251)
T PRK12826         83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---VGYPGLAHYAAS  159 (251)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc---cCCCCccHHHHH
Confidence            79999999987653111   11122335678999999998876     34578999999988762   122333456654


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     ..+...+...|+++++++||.+++
T Consensus       160 K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~  191 (251)
T PRK12826        160 KAGLVGFTRALALELAARNITVNSVHPGGVDT  191 (251)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCc
Confidence            431     222333455799999999999865

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.87  E-value=1.6e-21  Score=171.75  Aligned_cols=161  Identities=16%  Similarity=0.183  Sum_probs=115.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcC---CCCCeeEEEeeCCCccCcchhhhC--CC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~--~~  152 (250)
                      |+||||||+||||++++++|+++|++|++++|+.+.     .+.+.+..   ...+++++.+|++|.+++.++ +.  ++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~-~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI-IDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH-HHhCCC
Confidence            589999999999999999999999999999997642     22221111   024588999999999999875 44  57


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC---CeEEEEccCccccc-------CCCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL---KRIVLVSSVGVTKF-------NELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~---~~iV~iSS~~~~~~-------~~~~~~~~~~y~~  221 (250)
                      |+|||+|+..... .....+....++|+.|+.+++++++ .+.   .++|++||..+|+.       ++.+..+.+.|+ 
T Consensus        80 d~ViH~Aa~~~~~-~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~-  157 (343)
T TIGR01472        80 TEIYNLAAQSHVK-VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYA-  157 (343)
T ss_pred             CEEEECCcccccc-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhH-
Confidence            9999999976432 1222233445789999999999985 354   38999999998873       223444566666 


Q ss_pred             HHHHHHHHHHH----HhcCCCEEEEecceE
Q 025619          222 LKYKKMGEDFV----QKSGLPFTIISLCIY  247 (250)
Q Consensus       222 ~k~k~~~e~~~----~~~gi~~~~vrPg~v  247 (250)
                       .+|.++|.++    ++.|++++..++..+
T Consensus       158 -~sK~~~e~~~~~~~~~~~~~~~~~~~~~~  186 (343)
T TIGR01472       158 -AAKLYAHWITVNYREAYGLFAVNGILFNH  186 (343)
T ss_pred             -HHHHHHHHHHHHHHHHhCCceEEEeeccc
Confidence             5566666555    345888776665443

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK05599 hypothetical protein; Provisional

Probab=99.87  E-value=9.3e-22  Score=165.55  Aligned_cols=161  Identities=17%  Similarity=0.156  Sum_probs=114.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      |+++||||++|||++++++|+ +|++|++++|++++++++.+++.   ...+.++++|++|++++++++      ++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 59999999999988877654432   224778999999999988654      46899


Q ss_pred             EEEEcCcCCCcCCC-CCC--CCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          154 HVICCTGTTAFPSR-RWD--GDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~-~~~--~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      ++|||||....... +..  ...+..++|+.+..+++..+    . .+ .++||++||..+..+    .+....|+.+|.
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~----~~~~~~Y~asKa  155 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA----RRANYVYGSTKA  155 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC----CcCCcchhhHHH
Confidence            99999998642111 111  11223467888877665543    2 32 479999999887632    223345655443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||+++++.||++.
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~  184 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVI  184 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCccc
Confidence                 223334556689999999999984

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.87  E-value=1.3e-21  Score=163.20  Aligned_cols=165  Identities=20%  Similarity=0.218  Sum_probs=127.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecC--hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~--~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi  156 (250)
                      |++|||||+||||++.++.++++..  +|+.++.-  ..+.+.+......++..++++|++|.+.+.+. +.  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~-~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRL-FKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHH-HHhcCCCeEE
Confidence            4799999999999999999999864  46776652  12333333333467899999999999999876 44  699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCC--CeEEEEccCccccc---------CCCCcchhhHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL--KRIVLVSSVGVTKF---------NELPWSIMNLFGVLKYK  225 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~--~~iV~iSS~~~~~~---------~~~~~~~~~~y~~~k~k  225 (250)
                      |.|+-.++ +.....+..+.++|+.||.+|++++++.-  -|++++|+.-+|+.         +..|+.|.++|+.+|+.
T Consensus        80 hfAAESHV-DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAa  158 (340)
T COG1088          80 HFAAESHV-DRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAA  158 (340)
T ss_pred             Eechhccc-cccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhh
Confidence            99999884 34456677788999999999999996533  38999999999983         45678888887755432


Q ss_pred             H--HHHHHHHhcCCCEEEEecceEEe
Q 025619          226 K--MGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~--~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .  ....+.+.+|+++++.|+..-||
T Consensus       159 sD~lVray~~TYglp~~ItrcSNNYG  184 (340)
T COG1088         159 SDLLVRAYVRTYGLPATITRCSNNYG  184 (340)
T ss_pred             HHHHHHHHHHHcCCceEEecCCCCcC
Confidence            2  23355567899999999988775

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-21  Score=164.03  Aligned_cols=164  Identities=16%  Similarity=0.119  Sum_probs=119.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+.+|+++||||+|+||++++++|+++|++|++++|++++.+...+.+.  ..++.++++|++|++++++++      ++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3567999999999999999999999999999999999887665543322  346888999999999887643      36


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   +++..+..+++|+.++.++++++     +.+.+++|++||..+..+    ......|+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~y~~s  159 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG----APKLGAYVAS  159 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC----CCCcchHHHH
Confidence            79999999998643211   11122334578999999998876     234579999999877632    2233455544


Q ss_pred             HHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          223 KYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      |  ...+       ..+...+++++.|+||++.
T Consensus       160 K--~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~  190 (250)
T PRK12939        160 K--GAVIGMTRSLARELGGRGITVNAIAPGLTA  190 (250)
T ss_pred             H--HHHHHHHHHHHHHHhhhCEEEEEEEECCCC
Confidence            3  3333       3344578999999999874

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-21  Score=162.94  Aligned_cols=164  Identities=16%  Similarity=0.096  Sum_probs=117.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh---hCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI---FEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~v  155 (250)
                      ||+++||||+||||.+++++|+++|++|++++|++++.+...+.+   ...+++++++|++|++++++++   ..++|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            468999999999999999999999999999999988765543322   1347889999999999887643   2357999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      |||||......   .++++..+.+++|+.++.++++++     +.+.+++|++||..+..+    ......|+.+|..  
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~  156 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----RASNYVYGSAKAALT  156 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----CCCCcccHHHHHHHH
Confidence            99999754221   112222345688999999998876     245689999999876532    1222345544431  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         ..+..++.+.|+++++++||++.+
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~pg~v~t  183 (243)
T PRK07102        157 AFLSGLRNRLFKSGVHVLTVKPGFVRT  183 (243)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccC
Confidence               222334556799999999998753

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-21  Score=163.09  Aligned_cols=165  Identities=18%  Similarity=0.226  Sum_probs=119.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++++++||||+|+||++++++|+++|++|++++|++++.+.+.+.+. ..+++++++|++|.+++.+++      ++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999887666544332 156888999999998887643      3589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      |+|||+||......   ...++....+++|+.++.++++++    +.+.++||++||..+..    +......|+.+|. 
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~y~~sk~a  159 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN----FFAGGAAYNASKFG  159 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc----CCCCCchHHHHHHH
Confidence            99999998764221   111122345688999999988876    24567899999987653    2233345554443 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+.+..+++..|+++++++||++.
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~  187 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVA  187 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeecccc
Confidence                112223345579999999999874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.86  E-value=2e-21  Score=184.69  Aligned_cols=162  Identities=15%  Similarity=0.162  Sum_probs=120.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC-cchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~-~~~~~~~~~D~vi~~  158 (250)
                      .+|+||||||+|+||++++++|+++ |++|++++|+........   ...+++++.+|++|.++ ++++ +.++|+|||+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~---~~~~~~~~~gDl~d~~~~l~~~-l~~~D~ViHl  389 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL---GHPRFHFVEGDISIHSEWIEYH-IKKCDVVLPL  389 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc---CCCceEEEeccccCcHHHHHHH-hcCCCEEEEC
Confidence            5789999999999999999999986 799999999875433222   13468899999999765 4543 6789999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC-CCc-------------chhhHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-LPW-------------SIMNLFGVLKY  224 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~-~~~-------------~~~~~y~~~k~  224 (250)
                      ||.... ......+...+++|+.++.+++++++...+++|++||..+|+... .+.             .+.+.|+  .+
T Consensus       390 Aa~~~~-~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg--~s  466 (660)
T PRK08125        390 VAIATP-IEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYS--VS  466 (660)
T ss_pred             ccccCc-hhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchH--HH
Confidence            997652 222223345668999999999999954338999999998887321 111             1223566  55


Q ss_pred             HHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          225 KKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      |..+|+++    +.+|++++++||+.+||
T Consensus       467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyG  495 (660)
T PRK08125        467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMG  495 (660)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEEceeeC
Confidence            66666555    45699999999999997

>PRK05855 short chain dehydrogenase; Validated

Probab=99.86  E-value=1.1e-21  Score=183.43  Aligned_cols=166  Identities=14%  Similarity=0.051  Sum_probs=122.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+.++++|||||+||||++++++|+++|++|++++|+.++++++.+.+.  +.++.++.+|++|++++++++      ++
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999999999887776544332  346788999999999887654      45


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||.......   ..++....+++|+.|+.++++++     +.+ .++||++||.+++.+    ......|+.
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----~~~~~~Y~~  467 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP----SRSLPAYAT  467 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC----CCCCcHHHH
Confidence            79999999998653221   11222345579999999988865     233 479999999988842    333456665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     ..+..++.+.||++++|+||+|-
T Consensus       468 sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  499 (582)
T PRK05855        468 SKAAVLMLSECLRAELAAAGIGVTAICPGFVD  499 (582)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCCCc
Confidence            4431     12223455679999999999873

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.86  E-value=1.6e-21  Score=163.10  Aligned_cols=165  Identities=18%  Similarity=0.142  Sum_probs=119.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+|+||++++++|+++|+.|++.+|+.++++.+.... ..+++++.+|++|.+++++++      ++++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            356789999999999999999999999999999999988777654333 346788999999999887643      4679


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ..+++.+..+++|+.++.++++++     +.+.++||++||..+..+.    +....|+.+|.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----~~~~~Y~~sk~  157 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN----PGQANYCASKA  157 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC----CCCcchHHHHH
Confidence            99999999754211   111222445688999999888865     2456799999997665321    12234554443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...|+++++++||++.
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~  186 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIE  186 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCc
Confidence                 112223445579999999999874

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-21  Score=164.06  Aligned_cols=165  Identities=16%  Similarity=0.121  Sum_probs=120.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++++.+.+++.  ..++.++.+|++|.+++++++      ++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999988766544321  346788999999998887643      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC--------CCeEEEEccCcccccCCCCcc
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--------LKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~--------~~~iV~iSS~~~~~~~~~~~~  214 (250)
                      ++|+||||||......   ...+.....+++|+.++.++++++.     ..        .+++|++||..++.    +..
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~  161 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR----VLP  161 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC----CCC
Confidence            7999999999754211   1111223456889999988887651     11        36899999988763    233


Q ss_pred             hhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          215 IMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ....|+.+|.  +.+       .++...|+++++|+||++.+
T Consensus       162 ~~~~Y~~sK~--a~~~~~~~la~~~~~~~i~v~~v~pG~v~t  201 (258)
T PRK06949        162 QIGLYCMSKA--AVVHMTRAMALEWGRHGINVNAICPGYIDT  201 (258)
T ss_pred             CccHHHHHHH--HHHHHHHHHHHHHHhcCeEEEEEeeCCCcC
Confidence            3455665443  332       23345799999999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.6e-21  Score=160.40  Aligned_cols=164  Identities=17%  Similarity=0.215  Sum_probs=116.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+.+.+.  ..++.++++|++|++++++++      ++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999753 3333322211  345788999999999887643      35


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccc-cCCCCcchhhHHHHHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK-FNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~-~~~~~~~~~~~y~~~k~k~  226 (250)
                      ++|+||||||.....   ...+...+++|+.|+.++++++.+   ..+++|++||..+.. ....+.+....|+  .+|.
T Consensus        84 ~~d~vi~~ag~~~~~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~--~sK~  158 (248)
T PRK07806         84 GLDALVLNASGGMES---GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVA--RSKR  158 (248)
T ss_pred             CCcEEEECCCCCCCC---CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHH--HHHH
Confidence            799999999864311   123445679999999999998742   246899999965532 1112222234555  5555


Q ss_pred             HHHHHH-------HhcCCCEEEEecceEE
Q 025619          227 MGEDFV-------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e~~~-------~~~gi~~~~vrPg~v~  248 (250)
                      ++|.++       ...|+++++++||.+-
T Consensus       159 a~e~~~~~l~~~~~~~~i~v~~v~pg~~~  187 (248)
T PRK07806        159 AGEDALRALRPELAEKGIGFVVVSGDMIE  187 (248)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEeCCcccc
Confidence            555433       3478999999998764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.86  E-value=2.8e-21  Score=162.57  Aligned_cols=160  Identities=18%  Similarity=0.104  Sum_probs=117.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.  .+.     ...++.++++|++|.+++++++      ++++
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ-----EDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh-----cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999999986  111     1346788999999999888653      3569


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ..++.....+++|+.++.++++++     +.+.++||++||..+..    +......|+.+|.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~~sK~  153 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV----PRIGMAAYGASKA  153 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc----CCCCCchhHHHHH
Confidence            99999999764211   112223445688999999999876     24567999999987653    2333455654443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                           .+.+..++...||++++++||++.+
T Consensus       154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t  183 (252)
T PRK08220        154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDT  183 (252)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEecCcCcc
Confidence                 1122234445799999999998753

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.86  E-value=1.3e-21  Score=169.25  Aligned_cols=164  Identities=10%  Similarity=0.045  Sum_probs=112.2

Q ss_pred             CCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----------CC----CeeEEEeeC--C
Q 025619           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EE----TLQVCKGDT--R  139 (250)
Q Consensus        79 ~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----------~~----~~~~v~~Dl--~  139 (250)
                      +++||++|||||  ++|||.+++++|+++|++|++ +|+.++++++.....           ..    ....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            478999999999  899999999999999999998 777666555432211           01    135788999  5


Q ss_pred             Ccc------------------Ccchhh------hCCCcEEEEcCcCCC---cC--CCCCCCCCCcceehHHHHHHHHHHc
Q 025619          140 NPK------------------DLDPAI------FEGVTHVICCTGTTA---FP--SRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       140 d~~------------------~~~~~~------~~~~D~vi~~Ag~~~---~~--~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      +++                  ++++++      ++++|+||||||...   .+  ..++++....+++|+.++..+++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            555                  344332      578999999997532   11  1223334556689999999888876


Q ss_pred             ----cCCCCeEEEEccCcccccCCCCcchh-hHHHHHHH-----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          191 ----PSSLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       191 ----~~~~~~iV~iSS~~~~~~~~~~~~~~-~~y~~~k~-----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                          +++ ++||++||..+...    .+.. ..|+.+|.     .+.+..++.. .||++++|.||++-
T Consensus       165 ~p~m~~~-G~II~isS~a~~~~----~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~  228 (303)
T PLN02730        165 GPIMNPG-GASISLTYIASERI----IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG  228 (303)
T ss_pred             HHHHhcC-CEEEEEechhhcCC----CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence                233 79999999877632    2212 24655443     2233344544 69999999999874

>PRK12742 oxidoreductase; Provisional

Probab=99.86  E-value=2.4e-21  Score=161.46  Aligned_cols=162  Identities=17%  Similarity=0.210  Sum_probs=115.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV  155 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~v  155 (250)
                      .+++|+||||||+||||++++++|+++|++|+++.| +.++.+++.++.   +++++.+|++|.+++.+.+  ++++|+|
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id~l   79 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVRKSGALDIL   79 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence            357899999999999999999999999999988866 455555543322   3567889999988877644  4579999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-c--CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHH
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P--SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-~--~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e  229 (250)
                      |||||......   .+.++.+..+++|+.|+..++..+ +  ...+++|++||..+..   .+......|+.+|  .+++
T Consensus        80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~~Y~~sK--aa~~  154 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---MPVAGMAAYAASK--SALQ  154 (237)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---CCCCCCcchHHhH--HHHH
Confidence            99999764221   112223456688999999887655 2  2347999999977632   2333445666544  3333


Q ss_pred             -------HHHHhcCCCEEEEecceEE
Q 025619          230 -------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       230 -------~~~~~~gi~~~~vrPg~v~  248 (250)
                             .++...||++++|+||++.
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~  180 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPID  180 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCccc
Confidence                   3345578999999999874

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.1e-21  Score=164.25  Aligned_cols=165  Identities=15%  Similarity=0.147  Sum_probs=118.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..+++.+.....++.++.+|++|++++.+++      ++++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999999877666544332235688999999999887643      3589


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----c-CCC-CeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~-~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      |+|||+||.......    ..+.....+++|+.++.++++++    + .+. ++|+++||..+..    +++....|+.+
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~----~~~~~~~y~~~  163 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL----GYPGRTPYAAS  163 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc----CCCCCchhHHH
Confidence            999999997632111    11122445688999999988866    2 233 6788888866542    22233455544


Q ss_pred             HHHHHHHHH-------HHhcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDF-------VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~-------~~~~gi~~~~vrPg~v~~  249 (250)
                        |...+.+       +...++++++++||++++
T Consensus       164 --K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~  195 (264)
T PRK12829        164 --KWAVVGLVKSLAIELGPLGIRVNAILPGIVRG  195 (264)
T ss_pred             --HHHHHHHHHHHHHHHhhcCeEEEEEecCCcCC
Confidence              4433332       344689999999999864

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3e-21  Score=164.89  Aligned_cols=163  Identities=19%  Similarity=0.224  Sum_probs=117.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.++.++..+.+.  ..++.++.+|++|.+++.+++      +++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            466899999999999999999999999999999998876655433221  245778899999999887643      357


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||.......   +++.....+++|+.++.++++++     +.+.++||++||..++.+    .+....|+.  
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~--  161 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ----RPHMGAYGA--  161 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC----CCCcchHHH--
Confidence            9999999997542111   11122334588999999998875     245678999999887742    222345554  


Q ss_pred             HHHHHHHHH-------HhcCCCEEEEecceEE
Q 025619          224 YKKMGEDFV-------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e~~~-------~~~gi~~~~vrPg~v~  248 (250)
                      +|.+++.+.       ...||++++++||.+.
T Consensus       162 sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~  193 (274)
T PRK07775        162 AKAGLEAMVTNLQMELEGTGVRASIVHPGPTL  193 (274)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCCccc
Confidence            444444333       3359999999999873

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=3.1e-21  Score=161.11  Aligned_cols=167  Identities=19%  Similarity=0.153  Sum_probs=119.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+|+||++++++|+++|++|++++|++++.+.+.+.+.  ..++.++.+|++|++++.+++      ++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999999999999999877655433222  346788899999998887643      35


Q ss_pred             CCcEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+|||+||.........   +.....++.|+.++.++++++     +.+.++||++||.....    +..+...|+.+
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----~~~~~~~y~~s  157 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----GNPGQTNYSAA  157 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----CCCCCcHhHhH
Confidence            7899999999764321111   112334578999999988876     34668999999987653    22333455544


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     +.+.+.+++.++++++++||.+++
T Consensus       158 k~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~  189 (246)
T PRK05653        158 KAGVIGFTKALALELASRGITVNAVAPGFIDT  189 (246)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCC
Confidence            431     122233445699999999998754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.8e-21  Score=168.53  Aligned_cols=158  Identities=26%  Similarity=0.304  Sum_probs=120.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCC-cEEEEcCcCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV-THVICCTGTT  162 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~-D~vi~~Ag~~  162 (250)
                      .||||||+|+||++++++|+++|++|++++|...+.....     .++.++.+|++|.+.+.+. ...+ |+|||+|+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~-~~~~~d~vih~aa~~   75 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDEL-AKGVPDAVIHLAAQS   75 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHHH-HhcCCCEEEEccccC
Confidence            4999999999999999999999999999999876544322     3678899999998666654 5666 9999999987


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHccC-CCCeEEEEccCcccccC--------C-CCcchhhHHHHHHHHHHHHHHH
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN--------E-LPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~~~iV~iSS~~~~~~~--------~-~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      ..+......+...+++|+.|+.++++++++ +++++|+.||.++++..        + .+..+.+.|+  .+|..+|+.+
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg--~sK~~~E~~~  153 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYG--VSKLAAEQLL  153 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHH--HHHHHHHHHH
Confidence            643322211233678999999999999965 89999998887766532        1 2333344455  6677777666


Q ss_pred             Hh----cCCCEEEEecceEEe
Q 025619          233 QK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~----~gi~~~~vrPg~v~~  249 (250)
                      ..    .|++++++||+.+||
T Consensus       154 ~~~~~~~~~~~~ilR~~~vyG  174 (314)
T COG0451         154 RAYARLYGLPVVILRPFNVYG  174 (314)
T ss_pred             HHHHHHhCCCeEEEeeeeeeC
Confidence            43    479999999999997

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.3e-21  Score=165.64  Aligned_cols=164  Identities=13%  Similarity=0.103  Sum_probs=115.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-------HhhhhCcC--CCCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-------~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+.       +++..+++  ...++.++.+|++|++++.+++ 
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            3577999999999999999999999999999999997643       22222111  1346788999999999887653 


Q ss_pred             -----hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||.......   +.++.+..+++|+.|+.++++++.     .+.++||++||.....+.  ....
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~--~~~~  160 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK--WFAP  160 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc--ccCC
Confidence                 3589999999997543221   111224456799999999999772     345789999987654221  0133


Q ss_pred             hhHHHHHHHHHHHHH-------HHHhcCCCEEEEecce
Q 025619          216 MNLFGVLKYKKMGED-------FVQKSGLPFTIISLCI  246 (250)
Q Consensus       216 ~~~y~~~k~k~~~e~-------~~~~~gi~~~~vrPg~  246 (250)
                      ...|+.  +|.+++.       ++..+||++++|+||.
T Consensus       161 ~~~Y~~--sK~a~~~~~~~la~el~~~~I~v~~i~Pg~  196 (273)
T PRK08278        161 HTAYTM--AKYGMSLCTLGLAEEFRDDGIAVNALWPRT  196 (273)
T ss_pred             cchhHH--HHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence            445554  4444443       4455799999999994

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.86  E-value=5.1e-21  Score=171.37  Aligned_cols=155  Identities=24%  Similarity=0.338  Sum_probs=119.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh--hC-cC-CCCCeeEEEeeCCCccCcchhhhC---CC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL--FG-KQ-DEETLQVCKGDTRNPKDLDPAIFE---GV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~--~~-~~-~~~~~~~v~~Dl~d~~~~~~~~~~---~~  152 (250)
                      .++++|+||||+|+||++++++|+++|++|++++|+.++.+..  .+ .. ...+++++.+|++|++++.+++-+   ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999999987653210  00 00 134688999999999999876432   69


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      |+||||++....      .....+++|+.++.+++++++ .++++||++||.+++.    +   ...|  .++|...|++
T Consensus       138 D~Vi~~aa~~~~------~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~----p---~~~~--~~sK~~~E~~  202 (390)
T PLN02657        138 DVVVSCLASRTG------GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK----P---LLEF--QRAKLKFEAE  202 (390)
T ss_pred             cEEEECCccCCC------CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC----c---chHH--HHHHHHHHHH
Confidence            999999985321      122356889999999999885 6789999999988763    2   2233  3567777877


Q ss_pred             HHh--cCCCEEEEecceEEe
Q 025619          232 VQK--SGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~~--~gi~~~~vrPg~v~~  249 (250)
                      ++.  .|++++++||+.+|+
T Consensus       203 l~~~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        203 LQALDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             HHhccCCCCEEEEccHHHhc
Confidence            765  899999999998874

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.4e-21  Score=160.97  Aligned_cols=161  Identities=16%  Similarity=0.093  Sum_probs=116.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      +|+++||||+|+||++++++|+++|++|++++|++++.+.+.+.+...+++++++|++|.+++.+++      ++++|+|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999887766654443456888999999999887654      3469999


Q ss_pred             EEcCcCCCcCCCCCCC---CCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDG---DNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~---~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      |||||..........+   ....+++|+.++.++++++     +.+.++||++||.......     ....|+.+|  .+
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~y~~sK--~a  154 (257)
T PRK07074         82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----GHPAYSAAK--AG  154 (257)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----CCcccHHHH--HH
Confidence            9999976422111111   1223468999999988876     2456789999997654221     122454433  33


Q ss_pred             HH-------HHHHhcCCCEEEEecceEEe
Q 025619          228 GE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+       ..+...|+++++++||++.+
T Consensus       155 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t  183 (257)
T PRK07074        155 LIHYTKLLAVEYGRFGIRANAVAPGTVKT  183 (257)
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCCc
Confidence            33       33445689999999998864

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.86  E-value=1.8e-21  Score=163.26  Aligned_cols=165  Identities=15%  Similarity=0.129  Sum_probs=113.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      |++|+++||||+||||++++++|+++|++|++.. |+..+.++..+++.  ..++..+.+|++|.+++.+++      ++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999988854 44443333222211  335677899999998887643      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   .++++.+..+++|+.++.++.+++     +.+.++||++||..+..    +......|+.+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~y~~s  156 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----GQFGQTNYSTA  156 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----CCCCChhHHHH
Confidence            8999999999754211   112223445688999988877755     24567999999987653    22234455544


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |..     ..+.+++...|+++++|+||++.
T Consensus       157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~  187 (246)
T PRK12938        157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIG  187 (246)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEecccC
Confidence            431     12233445679999999999875

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-21  Score=163.21  Aligned_cols=164  Identities=12%  Similarity=0.071  Sum_probs=115.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|+|+||||+||||.+++++|+++|++|++++|+.++.+...+.+   ...++++|++|++++++++      ++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV---GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc---CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999999999999987766554332   2257899999999887654      2579


Q ss_pred             cEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      |+||||||.......     ..+..+..+++|+.|+.++++.+     +.+.++||++||..+....   ......|+.+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~---~~~~~~Y~~s  157 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS---ATSQISYTAS  157 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC---CCCCcchHHH
Confidence            999999997532111     11112345578999988887765     2456799999997553211   1122345554


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...|+++++++||++.
T Consensus       158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~  188 (255)
T PRK06057        158 KGGVLAMSRELGVQFARQGIRVNALCPGPVN  188 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcC
Confidence            43     112223445569999999999885

>PLN02240 UDP-glucose 4-epimerase

Probab=99.86  E-value=2.7e-21  Score=170.51  Aligned_cols=168  Identities=20%  Similarity=0.203  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh----HhhhhCcC--CCCCeeEEEeeCCCccCcchhhh-CC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-EG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~----~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~-~~  151 (250)
                      ++++|+|+||||+|+||++++++|+++|++|++++|....    .+.+.+..  ...+++++.+|++|++++.+++- .+
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999875321    11121111  12467889999999999886532 27


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc-------CCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k  223 (250)
                      +|+|||+|+..... .........+++|+.++.+++++++ .+.+++|++||..+|+.       ++.+..+...|+  .
T Consensus        82 ~d~vih~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~--~  158 (352)
T PLN02240         82 FDAVIHFAGLKAVG-ESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYG--R  158 (352)
T ss_pred             CCEEEEccccCCcc-ccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHH--H
Confidence            99999999975321 2223344567899999999999885 57789999999888763       223344455555  6


Q ss_pred             HHHHHHHHHH----h-cCCCEEEEecceEEe
Q 025619          224 YKKMGEDFVQ----K-SGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e~~~~----~-~gi~~~~vrPg~v~~  249 (250)
                      +|..+|++++    . .+++++++|++.+||
T Consensus       159 sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G  189 (352)
T PLN02240        159 TKLFIEEICRDIHASDPEWKIILLRYFNPVG  189 (352)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEEEEeecCcCC
Confidence            6777776653    2 478899999877665

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.5e-21  Score=164.62  Aligned_cols=164  Identities=13%  Similarity=0.123  Sum_probs=114.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .|+++||||+||||++++++|+++|++|++++|+.+ ..+...+.+.  ..++.++.+|++|++++.+++      ++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            478999999999999999999999999999998643 3222222111  346888999999998877643      3689


Q ss_pred             cEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHcc------CC-----CCeEEEEccCcccccCCCCcchh
Q 025619          153 THVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSALP------SS-----LKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~~------~~-----~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                      |+||||||.......     .++..+..+++|+.++.++++++.      .+     .++||++||..+..+    ..+.
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~  157 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV----SPNR  157 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC----CCCC
Confidence            999999997542111     112223456889999999988761      11     467999999887632    2233


Q ss_pred             hHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|..     +.+..++...|+++++++||.+.+
T Consensus       158 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t  195 (256)
T PRK12745        158 GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKT  195 (256)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcC
Confidence            456644432     122233445799999999998753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.86  E-value=3.4e-21  Score=167.87  Aligned_cols=157  Identities=26%  Similarity=0.328  Sum_probs=119.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|+||||+|+||++++++|+++|++|++++|++++...+.    ..+++++.+|++|.++++++ +.++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~l~~~-~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE----GLDVEIVEGDLRDPASLRKA-VAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc----cCCceEEEeeCCCHHHHHHH-HhCCCEEEEeceec
Confidence            47999999999999999999999999999999876543322    33688899999999999875 68899999999854


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--C------CCcch---hhHHHHHHHHHHHHH
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--E------LPWSI---MNLFGVLKYKKMGED  230 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--~------~~~~~---~~~y~~~k~k~~~e~  230 (250)
                      ...   ....+..+++|+.++.+++++++ .+++++|++||..+++..  .      .+..+   ...  |.++|.+.|+
T Consensus        76 ~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~--Y~~sK~~~e~  150 (328)
T TIGR03466        76 RLW---APDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGH--YKRSKFLAEQ  150 (328)
T ss_pred             ccC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccCh--HHHHHHHHHH
Confidence            211   12334566889999999999884 578899999999888631  1      11111   123  4466666666


Q ss_pred             HHH----hcCCCEEEEecceEEe
Q 025619          231 FVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +++    +.|++++++||+.+||
T Consensus       151 ~~~~~~~~~~~~~~ilR~~~~~G  173 (328)
T TIGR03466       151 AALEMAAEKGLPVVIVNPSTPIG  173 (328)
T ss_pred             HHHHHHHhcCCCEEEEeCCccCC
Confidence            554    3699999999999986

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.86  E-value=3.4e-21  Score=183.53  Aligned_cols=167  Identities=18%  Similarity=0.188  Sum_probs=122.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTH  154 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~  154 (250)
                      .++|+||||||+|+||++++++|+++  |++|++++|..  ++...+.......+++++.+|++|.+.+.+.+ ..++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            35689999999999999999999998  68899888752  22222221111347889999999988877542 358999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCC----------CCcchhhHHHHH
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNE----------LPWSIMNLFGVL  222 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~----------~~~~~~~~y~~~  222 (250)
                      |||+|+..... ..+.++...+++|+.|+.+++++++ .+ ++++|++||..+|+...          .+..+.+.|+  
T Consensus        84 ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~--  160 (668)
T PLN02260         84 IMHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYS--  160 (668)
T ss_pred             EEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcH--
Confidence            99999986532 2223334566899999999999985 34 78999999999887421          1223445666  


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      .+|..+|.+++    +.+++++++||+.|||
T Consensus       161 ~sK~~aE~~v~~~~~~~~l~~vilR~~~VyG  191 (668)
T PLN02260        161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYG  191 (668)
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEECcccccC
Confidence            55666666553    4699999999999997

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-21  Score=164.81  Aligned_cols=164  Identities=14%  Similarity=0.047  Sum_probs=117.5

Q ss_pred             CCCCCEEEEEcCCC-hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG-~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|+++||||+| |||+++++.|+++|++|++++|+.+++++..+++    ...++.++++|++|++++++++     
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35679999999996 8999999999999999999999987766544322    1235788999999998887643     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||......   .+.+.....+++|+.++..+++++    + .+ .++||++||..+..+    ......
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~----~~~~~~  169 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA----QHGQAH  169 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----CCCCcc
Confidence             368999999999753211   111122334578999998888865    2 23 578999999776632    223345


Q ss_pred             HHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+  |.+++       .++..+||++++|+||++.
T Consensus       170 Y~~s--Kaal~~~~~~la~e~~~~gI~v~~i~Pg~~~  204 (262)
T PRK07831        170 YAAA--KAGVMALTRCSALEAAEYGVRINAVAPSIAM  204 (262)
T ss_pred             hHHH--HHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence            5544  44443       3344579999999999875

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=5.6e-21  Score=159.47  Aligned_cols=159  Identities=21%  Similarity=0.174  Sum_probs=117.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV  155 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~v  155 (250)
                      ++++|+++||||+|+||++++++|+++|+ +|++++|+.++.++     ...++.++.+|++|.+++++.+  ++++|+|
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            45778999999999999999999999999 99999999876654     1457889999999999888653  3469999


Q ss_pred             EEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          156 ICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       156 i~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      ||+||......    ...+.....+++|+.++.++++++     +.+.+++|++||..++.    +......|+.+  |.
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----~~~~~~~y~~s--K~  151 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----NFPNLGTYSAS--KA  151 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----CCCCchHhHHH--HH
Confidence            99999832111    111122334578999999998875     24578999999988764    23334455544  44


Q ss_pred             HHH-------HHHHhcCCCEEEEecceEE
Q 025619          227 MGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..+       .++.+.|+++++++||.+.
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~  180 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPID  180 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCccc
Confidence            443       2334469999999999873

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.86  E-value=4e-21  Score=162.75  Aligned_cols=166  Identities=18%  Similarity=0.171  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+. +..+.+.+.+.  ..++.++.+|++|.+++.+++      +
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999988853 33333332221  345778999999999887643      4


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|++|||||.......   +.+..++.+++|+.++..+++++    . .+ .++||++||.....    +.+....|+
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~  159 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI----PWPLFVHYA  159 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC----CCCCCcccH
Confidence            679999999997542111   11112334688999887766543    2 23 47999999977652    334445666


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|+.     +.+..++...||++++|+||++.
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~  192 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAIN  192 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCC
Confidence            55532     22233445679999999999874

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.5e-21  Score=160.49  Aligned_cols=162  Identities=18%  Similarity=0.181  Sum_probs=118.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++++|+++||||+|+||+++++.|+++|++|++++|+.++.+++.+..   +..++.+|++|.+++++++  .+++|+||
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---GCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            467899999999999999999999999999999999988776654322   3567899999998887653  35699999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      ||||......   .++++.+..+++|+.++.++++++.     .+ .++||++||..++.+    ......|+.+|  ..
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~y~~sK--~a  156 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG----LPDHLAYCASK--AA  156 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC----CCCCcHhHHHH--HH
Confidence            9999864321   1112223345689999999998762     22 479999999887643    22334555444  33


Q ss_pred             HHH-------HHHhcCCCEEEEecceEEe
Q 025619          228 GED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      ++.       .+...|++++.++||++.+
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~  185 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLT  185 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCC
Confidence            332       3345689999999998753

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=3.9e-21  Score=162.57  Aligned_cols=166  Identities=13%  Similarity=0.023  Sum_probs=115.8

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecC-----------hhhHhhhhCcCC--CCCeeEEEeeCCCccC
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRD-----------PEKATTLFGKQD--EETLQVCKGDTRNPKD  143 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~-----------~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~  143 (250)
                      .+++|+++||||+|  |||++++++|+++|++|++++|.           .++..++.+++.  +.++.++++|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46889999999994  99999999999999999987542           122222222221  3467789999999998


Q ss_pred             cchhh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccC
Q 025619          144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFN  209 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~  209 (250)
                      +++++      ++++|+||||||......   ...+..+..+++|+.|+..+.+++    + .+.++||++||..+..  
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG--  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence            88654      467999999999754221   111122345688999988886544    2 3457999999988763  


Q ss_pred             CCCcchhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          210 ELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        +.+....|+.+|+.     +.+..++...||+++.|+||++-
T Consensus       161 --~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~  202 (256)
T PRK12859        161 --PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTD  202 (256)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEcccc
Confidence              33345566655542     22334556679999999999874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.8e-21  Score=182.10  Aligned_cols=167  Identities=19%  Similarity=0.248  Sum_probs=123.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|.+++++++      +
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999999988766544322  346888999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCCC--C---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAFPSR--R---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~--~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|+||||||.......  .   +++....+++|+.|+.++++++     +.+.++||++||.+++.+    .+....|
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y  522 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN----APRFSAY  522 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC----CCCcchH
Confidence            579999999997532111  0   1223345688999988887765     246689999999988742    2233456


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|..     ..+..++...||++++|+||+|.
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~  556 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVR  556 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCc
Confidence            644431     12223445679999999999874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.85  E-value=2.8e-20  Score=149.30  Aligned_cols=144  Identities=28%  Similarity=0.401  Sum_probs=119.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCCCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF  164 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~~~  164 (250)
                      |+|+||||++|+.++++|+++|++|+++.|++++.+.      ..+++++++|+.|++++.++ +.++|+||+++|....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~a-l~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAA-LKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHH-HTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhh-hhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999999998776      46899999999999999976 7899999999975431


Q ss_pred             CCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcc---hhhHHHHHHHHHHHHHHHHhcCCCEE
Q 025619          165 PSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWS---IMNLFGVLKYKKMGEDFVQKSGLPFT  240 (250)
Q Consensus       165 ~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~---~~~~y~~~k~k~~~e~~~~~~gi~~~  240 (250)
                                    +...+.+++++++ .+.+++|++|+.+.+......+.   ......+...++..|+.+++.+++|+
T Consensus        74 --------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  139 (183)
T PF13460_consen   74 --------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWT  139 (183)
T ss_dssp             --------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEE
T ss_pred             --------------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEE
Confidence                          2778889999884 68899999999999874333211   11112345677788999999999999


Q ss_pred             EEecceEEe
Q 025619          241 IISLCIYCI  249 (250)
Q Consensus       241 ~vrPg~v~~  249 (250)
                      ++||+++++
T Consensus       140 ivrp~~~~~  148 (183)
T PF13460_consen  140 IVRPGWIYG  148 (183)
T ss_dssp             EEEESEEEB
T ss_pred             EEECcEeEe
Confidence            999999986

...

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.85  E-value=2.7e-22  Score=169.99  Aligned_cols=154  Identities=24%  Similarity=0.304  Sum_probs=111.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcC----CCCCee----EEEeeCCCccCcchhhhC--CCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ----DEETLQ----VCKGDTRNPKDLDPAIFE--GVT  153 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~----~~~~~~----~v~~Dl~d~~~~~~~~~~--~~D  153 (250)
                      ||||||+|.||++++++|++.+. ++++++|++.++-.+..++    ...++.    .+.+|++|.+.+.++ +.  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~-~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI-FEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH-TT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH-HhhcCCC
Confidence            79999999999999999999985 7999999998877766555    233453    357899999999875 66  899


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      +|||.|+..+.+..+.. +.+..++|+.||.++++++ +.+++++|++||..+..       |.+.||  ++|+.+|..+
T Consensus        80 iVfHaAA~KhVpl~E~~-p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~-------PtnvmG--atKrlaE~l~  149 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDN-PFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN-------PTNVMG--ATKRLAEKLV  149 (293)
T ss_dssp             EEEE------HHHHCCC-HHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS---------SHHH--HHHHHHHHHH
T ss_pred             EEEEChhcCCCChHHhC-HHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC-------CCcHHH--HHHHHHHHHH
Confidence            99999999997765543 3445699999999999988 57999999999999984       344555  7889899887


Q ss_pred             Hhc-------CCCEEEEecceEEe
Q 025619          233 QKS-------GLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~-------gi~~~~vrPg~v~~  249 (250)
                      ...       +.++++||.|.|++
T Consensus       150 ~~~~~~~~~~~t~f~~VRFGNVlg  173 (293)
T PF02719_consen  150 QAANQYSGNSDTKFSSVRFGNVLG  173 (293)
T ss_dssp             HHHCCTSSSS--EEEEEEE-EETT
T ss_pred             HHHhhhCCCCCcEEEEEEecceec
Confidence            542       46899999999875

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.7e-21  Score=160.95  Aligned_cols=165  Identities=13%  Similarity=0.104  Sum_probs=116.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~------  149 (250)
                      ++++|+++||||+||||++++++|+++|++|+++ .|+.++.++..+.+.  ...++++++|++|++++.+++-      
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999875 677766554433221  2457889999999998876531      


Q ss_pred             ------CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          150 ------EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       150 ------~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                            +++|+||||||.......   +++.....+++|+.|+.++++++.   ...+++|++||..++.+    .....
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~----~~~~~  158 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG----FTGSI  158 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC----CCCCc
Confidence                  369999999997542111   111113345689999999998773   23468999999887642    23334


Q ss_pred             HHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+  |.+.+       .++...|+++++++||++.+
T Consensus       159 ~Y~~s--K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t  195 (254)
T PRK12746        159 AYGLS--KGALNTMTLPLAKHLGERGITVNTIMPGYTKT  195 (254)
T ss_pred             chHhh--HHHHHHHHHHHHHHHhhcCcEEEEEEECCccC
Confidence            55544  44333       33345789999999998753

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.85  E-value=4.9e-21  Score=161.38  Aligned_cols=165  Identities=21%  Similarity=0.256  Sum_probs=131.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--------~~  150 (250)
                      +..+|.|||||+.+|.|..+|++|.++|++|.+..-+++..+.+..+...++...++.|+|++++++++.        -.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            4678899999999999999999999999999999988888888776665778899999999999999765        23


Q ss_pred             CCcEEEEcCcCCC-cCCCCCCCC---CCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTA-FPSRRWDGD---NTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~-~~~~~~~~~---~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++..||||||+.. ..+.+|...   ...+++|+.|+.++..++    ++..+|||++||..+..    +.+...+|+.+
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~----~~p~~g~Y~~S  181 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV----ALPALGPYCVS  181 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc----cCcccccchhh
Confidence            6899999999654 344566554   335589999999888876    55678999999999873    33444555544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      |.     ...+.+++...||+|.+|.||.+
T Consensus       182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFF  211 (322)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence            43     33445778889999999999954

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.1e-21  Score=161.65  Aligned_cols=166  Identities=17%  Similarity=0.140  Sum_probs=116.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC----hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~----~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      +++|+++||||+||||++++++|+++|++|++++|.    .+..+++.++..  ..+++++.+|++|.+++++.+     
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999997653    333333322221  346788999999999887653     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc------CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~------~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||......   .+++.....+++|+.++.++++++.      .+.+++|++||..++.+    ......
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~  159 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG----NRGQVN  159 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC----CCCCch
Confidence             357999999999865211   1112223455889999999998764      35679999999887742    223345


Q ss_pred             HHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|..     +.+..++...|+++++++||++.+
T Consensus       160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t  195 (249)
T PRK12827        160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINT  195 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCC
Confidence            5544431     122233345699999999999853

>PRK06484 short chain dehydrogenase; Validated

Probab=99.85  E-value=4.1e-21  Score=177.92  Aligned_cols=164  Identities=13%  Similarity=0.110  Sum_probs=121.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      .++|+++||||++|||.+++++|+++|++|++++|+.++++++.+++ ..++..+++|++|++++++++      ++++|
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999999999999998877765544 345678999999999887654      46899


Q ss_pred             EEEEcCcCCCc---C--CCCCCCCCCcceehHHHHHHHHHHc-----cCCC-CeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          154 HVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       154 ~vi~~Ag~~~~---~--~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +||||||....   +  ..+.++.+..+++|+.++..+++++     +.+. ++||++||..+...    .+....|+.+
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~----~~~~~~Y~as  157 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA----LPKRTAYSAS  157 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC----CCCCchHHHH
Confidence            99999997421   1  1122223456689999999988876     2233 49999999887642    2333456544


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||+++.|+||++-
T Consensus       158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~  188 (520)
T PRK06484        158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVR  188 (520)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCcC
Confidence            43     122334556679999999999863

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.85  E-value=3.1e-21  Score=162.29  Aligned_cols=162  Identities=13%  Similarity=0.075  Sum_probs=115.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      +|++|||||+|+||++++++|+++|++|++++|++++.+.+.+.+.  ..++.++.+|++|.+++++++      ++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999999877665544322  346788999999999776432      46799


Q ss_pred             EEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      +||||||........   .+..+..++.|+.|+..+++++     +.+.+++|++||..++.+.    .....|+.+|. 
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----~~~~~y~~sk~-  155 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS----PFKSAYVAAKH-  155 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----CCCchhHHHHH-
Confidence            999999976432111   1112334568999988888765     2467899999998766422    22345554442 


Q ss_pred             HHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          226 KMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                       .++       ..+...++++++++||++++
T Consensus       156 -a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~  185 (255)
T TIGR01963       156 -GLIGLTKVLALEVAAHGITVNAICPGYVRT  185 (255)
T ss_pred             -HHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence             222       22344699999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=7.3e-21  Score=160.72  Aligned_cols=164  Identities=16%  Similarity=0.144  Sum_probs=115.3

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCh-----------hhHhhhhCcCC--CCCeeEEEeeCCCccC
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQD--EETLQVCKGDTRNPKD  143 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~-----------~~~~~~~~~~~--~~~~~~v~~Dl~d~~~  143 (250)
                      .+++|++|||||+|  |||.+++++|+++|++|++++|++           .....+.+.+.  ..+++++++|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            45789999999995  899999999999999999999872           11111211111  3468899999999998


Q ss_pred             cchhh------hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccC
Q 025619          144 LDPAI------FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN  209 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~  209 (250)
                      +.+++      ++++|+||||||.......   .++..+..+++|+.|+..+++++.     ...++||++||..++.  
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG--  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC--
Confidence            87644      4679999999997542211   111223446899999999998762     2457999999987764  


Q ss_pred             CCCcchhhHHHHHHHHHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          210 ELPWSIMNLFGVLKYKKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                        +......|+.  +|.+++.+       +...|++++.++||.+.
T Consensus       160 --~~~~~~~Y~~--sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~  201 (256)
T PRK12748        160 --PMPDELAYAA--TKGAIEAFTKSLAPELAEKGITVNAVNPGPTD  201 (256)
T ss_pred             --CCCCchHHHH--HHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence              2233345554  44444433       34569999999999874

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.2e-21  Score=161.81  Aligned_cols=164  Identities=10%  Similarity=0.060  Sum_probs=113.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +.++|++|||||+||||++++++|+++|++|+++.++ .+..+.+.+.+  ...++.++.+|++|.+++.+++      +
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999887764 44444333222  1346788999999999887643      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ..++..+..+++|+.|+.++++++.     ...+++|+++|...+.+    .+....|+.
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~----~p~~~~Y~~  161 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL----NPDFLSYTL  161 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC----CCCchHHHH
Confidence            57999999999754211   1222234456899999999998762     23568999988766532    122245665


Q ss_pred             HHHHHHHHHHHH----h--cCCCEEEEecceEE
Q 025619          222 LKYKKMGEDFVQ----K--SGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e~~~~----~--~gi~~~~vrPg~v~  248 (250)
                      +|  .+++.+.+    +  .++++++++||++.
T Consensus       162 sK--~a~~~~~~~la~~~~~~i~v~~i~PG~v~  192 (258)
T PRK09134        162 SK--AALWTATRTLAQALAPRIRVNAIGPGPTL  192 (258)
T ss_pred             HH--HHHHHHHHHHHHHhcCCcEEEEeeccccc
Confidence            44  43332221    1  24999999999875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.3e-21  Score=162.55  Aligned_cols=166  Identities=18%  Similarity=0.139  Sum_probs=115.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+..+...+.. ...++.++.+|++|++++++++      +++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356799999999999999999999999999999999875322211111 1345778999999999888653      457


Q ss_pred             CcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||........   .+..++.+++|+.++.++++++     +.+.++||++||..+...   +......|+.+|
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---~~~~~~~Y~~sK  159 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV---ADPGETAYALTK  159 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc---CCCCcchHHHHH
Confidence            99999999975422111   1112234688999999988875     235579999999765311   112234555444


Q ss_pred             HHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          224 YKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                        ..++       .++.+.|++++.|+||++.+
T Consensus       160 --~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t  190 (263)
T PRK08226        160 --AAIVGLTKSLAVEYAQSGIRVNAICPGYVRT  190 (263)
T ss_pred             --HHHHHHHHHHHHHhcccCcEEEEEecCcccC
Confidence              3333       23344689999999998753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.85  E-value=4.2e-21  Score=160.21  Aligned_cols=159  Identities=14%  Similarity=0.073  Sum_probs=111.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|++|||||+||||++++++|+++|++|++++|+++...+..+   ..+++++.+|++|.+++++++      ++++|+
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR---QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            35799999999999999999999999999999998754322221   124678999999999887643      457999


Q ss_pred             EEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       155 vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +|||||.......   .+++.+..+++|+.++..+.+++    + .+  .++||++||.....    +......|+.+  
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~as--  151 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----GSDKHIAYAAS--  151 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc----CCCCCccHHHH--
Confidence            9999997532111   11223445688999988777655    2 22  46899999977652    22233455544  


Q ss_pred             HHHHHHHHH----h--cCCCEEEEecceEE
Q 025619          225 KKMGEDFVQ----K--SGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~~----~--~gi~~~~vrPg~v~  248 (250)
                      |..++.+.+    +  .+|++++|+||++.
T Consensus       152 Kaal~~l~~~~a~e~~~~irvn~v~Pg~~~  181 (236)
T PRK06483        152 KAALDNMTLSFAAKLAPEVKVNSIAPALIL  181 (236)
T ss_pred             HHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence            444443321    1  25999999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.3e-21  Score=160.56  Aligned_cols=166  Identities=19%  Similarity=0.166  Sum_probs=118.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+|+||.+++++|+++|++|+++ +|+.++.+.+.+.+.  ..++.++.+|++|++++.+++      +
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999999 998876655433221  345788999999999887643      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+|||+||......   .+.+..+..+++|+.++.++++++     +.+.+++|++||.......    .....|+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~----~~~~~y~~  157 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA----SCEVLYSA  157 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC----CCccHHHH
Confidence            47999999999863211   111112345578999988888766     2456789999998776422    22334554


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     ..+...+...|+++++++||++.
T Consensus       158 sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~  189 (247)
T PRK05565        158 SKGAVNAFTKALAKELAPSGIRVNAVAPGAID  189 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEEECCcc
Confidence            4431     12223345679999999999874

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.4e-21  Score=161.14  Aligned_cols=161  Identities=18%  Similarity=0.216  Sum_probs=117.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      ++++|||||+|+||++++++|+++|++|++++|++++.+.+.+.+.  ..++.++.+|++|.+++++++      ++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999999876655433221  346788999999999887643      35799


Q ss_pred             EEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      +||||||.......    +++.....+++|+.++.++++++    +.+.+++|++||..++.+    ......|+.+  |
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~s--K  154 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG----VPTRSGYAAS--K  154 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC----CCCccHHHHH--H
Confidence            99999997643221    11112334688999999999876    234579999999887742    2334556644  4


Q ss_pred             HHHHH-------HHHhcCCCEEEEecceEE
Q 025619          226 KMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                      ...+.       ++...|+++++++||++.
T Consensus       155 ~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~  184 (263)
T PRK06181        155 HALHGFFDSLRIELADDGVAVTVVCPGFVA  184 (263)
T ss_pred             HHHHHHHHHHHHHhhhcCceEEEEecCccc
Confidence            44332       334579999999999874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=6e-21  Score=159.52  Aligned_cols=166  Identities=19%  Similarity=0.194  Sum_probs=116.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcC--CCCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++|+||||||+|+||++++++|+++|++|+++.|+.++ .+.+.+..  ...+++++.+|++|.+++++++      ++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999998887765443 22222211  1346888999999999887653      25


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+|||+||.......   ..+.....+++|+.++.++++.+     +.+.+++|++||..++.+    ......|+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~----~~~~~~y~~s  159 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG----WPGRSNYAAA  159 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC----CCCchHHHHH
Confidence            78999999996542211   11122345578999999998876     346789999999888742    2233455544


Q ss_pred             HHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..     ...++++++.|++++++|||++++
T Consensus       160 K~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~  191 (249)
T PRK12825        160 KAGLVGLTKALARELAEYGITVNMVAPGDIDT  191 (249)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEECCccC
Confidence            431     122233455799999999999875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.8e-21  Score=161.01  Aligned_cols=158  Identities=13%  Similarity=0.017  Sum_probs=112.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+++||||+|+||++++++|+++|++|++++|++....       ..++..+.+|++|+ +.+.+. ++++|+|||
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~~-~~~id~lv~   73 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDDLEPLFDW-VPSVDILCN   73 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHHHHHHHHh-hCCCCEEEE
Confidence            467899999999999999999999999999999999864321       23678899999997 333322 578999999


Q ss_pred             cCcCCCc--CCCC--CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH----
Q 025619          158 CTGTTAF--PSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (250)
Q Consensus       158 ~Ag~~~~--~~~~--~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~----  224 (250)
                      |||....  +..+  .++.+..+++|+.|+.++++++     +.+.++||++||..+..+    ......|+.+|.    
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~a~~~  149 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA----GGGGAAYTASKHALAG  149 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC----CCCCcccHHHHHHHHH
Confidence            9996431  1111  1122445688999999998876     234578999999877632    222334554443    


Q ss_pred             -HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                       .+.+..++...||++++++||++.
T Consensus       150 ~~~~la~~~~~~gi~v~~v~pg~v~  174 (235)
T PRK06550        150 FTKQLALDYAKDGIQVFGIAPGAVK  174 (235)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCcc
Confidence             122233445679999999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-21  Score=165.22  Aligned_cols=165  Identities=12%  Similarity=0.084  Sum_probs=117.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|++|||||+||||.+++++|+++|++|++++|+.+. .+.+.+.+.  ..++.++.+|++|.+++++++      +
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999999987532 333222221  345778999999999887643      3


Q ss_pred             CCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +++|+||||||......    ..++.....+++|+.++.++++++.   ...++||++||..++...    .....|+.+
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~----~~~~~Y~~s  198 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN----ETLIDYSAT  198 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----CCcchhHHH
Confidence            57999999999753211    1112223456899999999999873   234689999998887432    122345544


Q ss_pred             HHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          223 KYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                        |.+++       ..+...||+++.|+||++.+
T Consensus       199 --K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T  230 (290)
T PRK06701        199 --KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWT  230 (290)
T ss_pred             --HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCC
Confidence              33333       33345699999999998753

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.1e-21  Score=157.98  Aligned_cols=154  Identities=12%  Similarity=0.080  Sum_probs=112.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~vi~~Ag  160 (250)
                      +++||||+||||++++++|+++|++|++++|+.++++++.+..   +++++++|++|++++++++   .+++|++|||||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            6999999999999999999999999999999998877665432   4678899999999988653   136999999998


Q ss_pred             CCCc---CC----C-CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----
Q 025619          161 TTAF---PS----R-RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----  224 (250)
Q Consensus       161 ~~~~---~~----~-~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----  224 (250)
                      ....   +.    . .+++....+++|+.++.++++++.   ...++||++||...        .....|+.+|+     
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------~~~~~Y~asKaal~~~  150 (223)
T PRK05884         79 PSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------PAGSAEAAIKAALSNW  150 (223)
T ss_pred             ccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------CCccccHHHHHHHHHH
Confidence            5321   10    0 112234556899999999998762   22479999999762        11235555443     


Q ss_pred             HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+.+..++...||+++.|+||++.
T Consensus       151 ~~~la~e~~~~gI~v~~v~PG~v~  174 (223)
T PRK05884        151 TAGQAAVFGTRGITINAVACGRSV  174 (223)
T ss_pred             HHHHHHHhhhcCeEEEEEecCccC
Confidence            223334556689999999999874

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.85  E-value=9.3e-21  Score=171.69  Aligned_cols=160  Identities=16%  Similarity=0.118  Sum_probs=113.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ..|+||||||+|+||++|+++|+++|++|++++|.... .+.........+++++.+|+.+..      +.++|+|||+|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~------~~~~D~ViHlA  192 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI------LLEVDQIYHLA  192 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc------ccCCCEEEECc
Confidence            45689999999999999999999999999999985321 111111111346778888886542      35799999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC------------CCcchhhHHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k~k~~  227 (250)
                      +...... ...++...+++|+.|+.+++++++....++|++||..+|+...            .|..+.+.|+  .+|..
T Consensus       193 a~~~~~~-~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg--~SK~~  269 (436)
T PLN02166        193 CPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD--EGKRT  269 (436)
T ss_pred             eeccchh-hccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchH--HHHHH
Confidence            8754221 1123445668999999999999964235899999999987421            1233345566  45555


Q ss_pred             HHHHH----HhcCCCEEEEecceEEe
Q 025619          228 GEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +|+.+    +..+++++++||+.+||
T Consensus       270 aE~~~~~y~~~~~l~~~ilR~~~vYG  295 (436)
T PLN02166        270 AETLAMDYHRGAGVEVRIARIFNTYG  295 (436)
T ss_pred             HHHHHHHHHHHhCCCeEEEEEccccC
Confidence            66544    45699999999999987

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7e-21  Score=162.35  Aligned_cols=162  Identities=13%  Similarity=0.119  Sum_probs=115.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      |+++||||+||||.+++++|+++|++|++++|+++++++..+++.   .....++.+|++|++++++.+      ++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999999999999999877655433221   123455789999998877543      45799


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +||||||......   .+++.....+++|+.|+.++++++     + ...++||++||..+..+    .+....|+.+|.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----~~~~~~Y~~sK~  156 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA----LPWHAAYSASKF  156 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----CCCCcchHHHHH
Confidence            9999999754211   122222445688999999999875     2 23479999999876532    222344555443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           ...+..++...||++++++||.+.
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~  185 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVK  185 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence                 222334455689999999999875

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.85  E-value=8.9e-21  Score=165.08  Aligned_cols=166  Identities=23%  Similarity=0.304  Sum_probs=126.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++.+++||||+|++|++++++|+++|  .+|++++..+.......+..  ....++.+.+|+.|..++.++ +.++ .|+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a-~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNA-FQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhh-ccCc-eEE
Confidence            45699999999999999999999998  78999998764221111111  256789999999999999976 7888 788


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCccccc--------CCCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF--------NELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~--------~~~~~~~~~~y~~~k~k~~  227 (250)
                      |+|+... +.....+.+..+++|+.||.+++++| +.+++++||+||..+..+        +..|++....-.|+++|..
T Consensus        81 h~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   81 HCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKAL  159 (361)
T ss_pred             EeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHH
Confidence            8877653 32223345667899999999999999 479999999999998752        3334442211135588999


Q ss_pred             HHHHHHhc----CCCEEEEecceEEe
Q 025619          228 GEDFVQKS----GLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~~----gi~~~~vrPg~v~~  249 (250)
                      +|+.+.+.    ++..+++||..|||
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYG  185 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYG  185 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccC
Confidence            99887653    37899999999998

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.9e-21  Score=162.90  Aligned_cols=162  Identities=17%  Similarity=0.164  Sum_probs=113.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----hCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----~~~~D  153 (250)
                      |+|+++|||| ||||++++++|+ +|++|++++|+.++++++.+++.  ..++.++++|++|.+++++++     ++++|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            4578999998 799999999996 89999999999877665543332  235778999999999887654     36799


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCC-------------------C
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNE-------------------L  211 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~-------------------~  211 (250)
                      +||||||....    ..+....+++|+.|+.++++++.   ...+++|++||..+.....                   .
T Consensus        79 ~li~nAG~~~~----~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         79 GLVHTAGVSPS----QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             EEEECCCcCCc----hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            99999997531    12345567999999999998762   1235678888877653210                   0


Q ss_pred             Cc-------chhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          212 PW-------SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       212 ~~-------~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.       .....|+.+|..     +.+..++.+.||++++|+||++.
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~  203 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIIS  203 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCc
Confidence            00       123455544431     12223445679999999999874

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.5e-21  Score=159.97  Aligned_cols=164  Identities=13%  Similarity=0.177  Sum_probs=115.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+++.+++.  ..++.++.+|++|.+++++++      +
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            457889999999999999999999999999988877543 3333322211  346788999999999887654      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|+||||||......   ..++..+..+++|+.++.++++++.   ...++||++||.....    +.+....|+.+|
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~~Y~~sK  157 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----PLPGYGPYAASK  157 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----CCCCCchhHHHH
Confidence            58999999999754211   1111223445789999999888762   2346899999977763    233345566444


Q ss_pred             HHHHHHH-------HHHhcCCCEEEEecceEE
Q 025619          224 YKKMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                        ..++.       ++...|+++++++||++-
T Consensus       158 --~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~  187 (245)
T PRK12937        158 --AAVEGLVHVLANELRGRGITVNAVAPGPVA  187 (245)
T ss_pred             --HHHHHHHHHHHHHhhhcCeEEEEEEeCCcc
Confidence              33332       334568999999999863

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=7.9e-21  Score=159.43  Aligned_cols=165  Identities=18%  Similarity=0.146  Sum_probs=116.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++|+++||||+|+||++++++|+++|++|+++.+ +++..+++.+.+.  ..++.++.+|++|++++.+++      ++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999987654 4455444432221  346788999999999887654      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   ..++..++.+++|+.++.++++++.     .+.++||++||..+..+    ..+...|+.+
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~s  159 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG----GFGQTNYSAA  159 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC----CCCCcchHHH
Confidence            7999999999864221   1122334556899999999988762     34579999999876532    1233456654


Q ss_pred             HHHH-----HHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYKK-----MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~-----~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |...     .+..++...|+++++++||++.
T Consensus       160 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~  190 (247)
T PRK12935        160 KAGMLGFTKSLALELAKTNVTVNAICPGFID  190 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEeCCCc
Confidence            4321     1222334569999999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.4e-21  Score=158.38  Aligned_cols=165  Identities=16%  Similarity=0.160  Sum_probs=114.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCc--cCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNP--KDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~--~~~~~~~-----  148 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++   ....+.++.+|++|.  +++.+++     
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998776654332   123567789999863  3444322     


Q ss_pred             -h-CCCcEEEEcCcCCCc--C--CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -F-EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~-~~~D~vi~~Ag~~~~--~--~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       + +++|+||||||....  +  ...+++....+++|+.|+.++++++     +.+.+++|++||..+..    +.....
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----~~~~~~  158 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET----PKAYWG  158 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc----CCCCcc
Confidence             3 678999999997431  1  1111222335689999999888876     23467999999977653    222234


Q ss_pred             HHHHHHHHHHHHHH-------HHhc-CCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGEDF-------VQKS-GLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e~~-------~~~~-gi~~~~vrPg~v~~  249 (250)
                      .|+.  +|..++.+       +... ++++++|+||+|.+
T Consensus       159 ~Y~~--sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t  196 (239)
T PRK08703        159 GFGA--SKAALNYLCKVAADEWERFGNLRANVLVPGPINS  196 (239)
T ss_pred             chHH--hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccC
Confidence            4554  44444433       2233 69999999999854

>PRK09135 pteridine reductase; Provisional

Probab=99.84  E-value=1.2e-20  Score=158.14  Aligned_cols=164  Identities=12%  Similarity=0.123  Sum_probs=115.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++++|||||+||||++++++|+++|++|++++|+. ++.+.+.+.+   ....+.++.+|++|.+++.+++      +
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999863 3333332211   1235788999999999888653      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +++|+||||||......   ..++..+..+++|+.|+.++++++.    ...++++++++....    .+..+...|+.+
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Y~~s  159 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE----RPLKGYPVYCAA  159 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc----CCCCCchhHHHH
Confidence            57899999999754211   1122234466899999999999872    234577777765443    344555677654


Q ss_pred             HHHHHHHHHHH----h--cCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ----K--SGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~----~--~gi~~~~vrPg~v~~  249 (250)
                        |..++.+++    +  .++++++++||++++
T Consensus       160 --K~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~  190 (249)
T PRK09135        160 --KAALEMLTRSLALELAPEVRVNAVAPGAILW  190 (249)
T ss_pred             --HHHHHHHHHHHHHHHCCCCeEEEEEeccccC
Confidence              444443332    2  369999999999875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.84  E-value=5.8e-21  Score=153.76  Aligned_cols=160  Identities=23%  Similarity=0.317  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC---cCCCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++||++++|||.||||+++.++|+++|..+.++..+.|+.+..++   ......+.++++|+++..++++++      +
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999998888877776655433   223457889999999999988765      7


Q ss_pred             CCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHH----HHHHc--cCC--CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRN----LVSAL--PSS--LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~----l~~a~--~~~--~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +.+|++||+||+..  +.   +.+..+.+|+.|..+    .++.+  ++|  .+-||++||..+..    |.+-.+.|+.
T Consensus        82 g~iDIlINgAGi~~--dk---d~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~----P~p~~pVY~A  152 (261)
T KOG4169|consen   82 GTIDILINGAGILD--DK---DWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD----PMPVFPVYAA  152 (261)
T ss_pred             CceEEEEccccccc--ch---hHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC----ccccchhhhh
Confidence            88999999999874  33   345566889888444    44444  232  46899999999984    5555667776


Q ss_pred             HHH-----HH--HHHHHHHhcCCCEEEEecceE
Q 025619          222 LKY-----KK--MGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       222 ~k~-----k~--~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      +|+     .+  +-..+++++||++++++||++
T Consensus       153 sKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t  185 (261)
T KOG4169|consen  153 SKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT  185 (261)
T ss_pred             cccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence            664     23  334678899999999999986

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.84  E-value=1.2e-20  Score=165.97  Aligned_cols=163  Identities=14%  Similarity=0.170  Sum_probs=115.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcC--CCCCeeEEEeeCCCccCcchhhhC-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~-  150 (250)
                      +.++|+||||||+||||++++++|+++|++|++++|+.+.     ++.+.+..  ...+++++.+|++|.+++.++ +. 
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   81 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW-LDD   81 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH-HHH
Confidence            3467899999999999999999999999999999987542     22221110  124578999999999998865 44 


Q ss_pred             -CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-----eEEEEccCcccccC------CCCcchhh
Q 025619          151 -GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-----RIVLVSSVGVTKFN------ELPWSIMN  217 (250)
Q Consensus       151 -~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-----~iV~iSS~~~~~~~------~~~~~~~~  217 (250)
                       ++|+|||+|+..... ..+..+...+++|+.|+.+++++++ .+.+     ++|++||..+|+..      +.+..+.+
T Consensus        82 ~~~d~Vih~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~  160 (340)
T PLN02653         82 IKPDEVYNLAAQSHVA-VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRS  160 (340)
T ss_pred             cCCCEEEECCcccchh-hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCC
Confidence             589999999976422 2222334455889999999999884 3443     89999999888742      23344556


Q ss_pred             HHHHHHHHHHHHHHH----HhcCCCEEEEecc
Q 025619          218 LFGVLKYKKMGEDFV----QKSGLPFTIISLC  245 (250)
Q Consensus       218 ~y~~~k~k~~~e~~~----~~~gi~~~~vrPg  245 (250)
                      .|+  .+|.++|.++    ++.|+.++..++.
T Consensus       161 ~Y~--~sK~~~e~~~~~~~~~~~~~~~~~~~~  190 (340)
T PLN02653        161 PYA--VAKVAAHWYTVNYREAYGLFACNGILF  190 (340)
T ss_pred             hhH--HHHHHHHHHHHHHHHHcCCeEEEeeec
Confidence            666  4566666554    4457766655543

>PLN00015 protochlorophyllide reductase

Probab=99.84  E-value=9.3e-21  Score=164.65  Aligned_cols=121  Identities=18%  Similarity=0.179  Sum_probs=92.3

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcEEE
Q 025619           86 LVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHVI  156 (250)
Q Consensus        86 lVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~vi  156 (250)
                      +||||++|||.+++++|+++| ++|++++|+.++.+++.+++.  ..++.++++|++|.+++++++      ++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999999887766554432  235778899999999987654      35799999


Q ss_pred             EcCcCCCcC--C--CCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCccc
Q 025619          157 CCTGTTAFP--S--RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVT  206 (250)
Q Consensus       157 ~~Ag~~~~~--~--~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~  206 (250)
                      ||||.....  .  .+.+..+..+++|+.|+..+++++    + .+  .++||++||..+.
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~  141 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN  141 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence            999975321  1  112223456689999988887754    2 23  4799999998764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.1e-21  Score=160.88  Aligned_cols=163  Identities=14%  Similarity=0.102  Sum_probs=109.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~----  148 (250)
                      .+++|+++||||+||||.+++++|+++|++|+++.++.    +..+++.+++.  +.++.++++|++|++++++++    
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999977776543    22332222211  346788999999999988654    


Q ss_pred             --hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEE-ccCcccccCCCCcchhhHH
Q 025619          149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLV-SSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~i-SS~~~~~~~~~~~~~~~~y  219 (250)
                        ++++|+||||||......   ...+..+..+++|+.++..+++++.+   ..++++++ ||..+..     .+....|
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-----~~~~~~Y  159 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-----TPFYSAY  159 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-----CCCcccc
Confidence              368999999999754211   11122344568899999999987731   23567766 4433321     1222445


Q ss_pred             HHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          220 GVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+  |.+.+       .++...||++++++||++.
T Consensus       160 ~~s--K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~  193 (257)
T PRK12744        160 AGS--KAPVEHFTRAASKEFGARGISVTAVGPGPMD  193 (257)
T ss_pred             hhh--HHHHHHHHHHHHHHhCcCceEEEEEecCccc
Confidence            544  44444       3334468999999999985

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.84  E-value=1.6e-20  Score=170.38  Aligned_cols=159  Identities=15%  Similarity=0.134  Sum_probs=113.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|+||||||+|+||++++++|+++|++|++++|..... +.........+++++.+|+.+.     + +.++|+|||+|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~-l~~~D~ViHlA  191 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----I-LLEVDQIYHLA  191 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----h-hcCCCEEEEee
Confidence            568999999999999999999999999999998753211 1111112235678888888664     2 35689999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC------------CCcchhhHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKK  226 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k~k~  226 (250)
                      +..... ....++...+++|+.|+.+++++++ .+ .++|++||..+|+...            .|..+.+.|+  ++|.
T Consensus       192 a~~~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~--~SK~  267 (442)
T PLN02206        192 CPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD--EGKR  267 (442)
T ss_pred             eecchh-hhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHH--HHHH
Confidence            875421 1112344566899999999999995 45 4899999999986321            1222234555  6666


Q ss_pred             HHHHHH----HhcCCCEEEEecceEEe
Q 025619          227 MGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ++|+.+    ++.|++++++||+.+||
T Consensus       268 ~aE~~~~~y~~~~g~~~~ilR~~~vyG  294 (442)
T PLN02206        268 TAETLTMDYHRGANVEVRIARIFNTYG  294 (442)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccC
Confidence            676655    44699999999999987

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.84  E-value=1.4e-20  Score=162.89  Aligned_cols=162  Identities=19%  Similarity=0.198  Sum_probs=115.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC--CcEEEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC  157 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--~D~vi~  157 (250)
                      +|+||||||+||++++++|+++|  ++|++++|..  .+.+.+.+.....+++++.+|++|++++.++ +.+  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRL-FTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHH-HhhcCCCEEEE
Confidence            48999999999999999999987  7898887642  1111111111134678899999999999875 454  999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-CC-CeEEEEccCcccccC--------CCCcchhhHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~-~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~  227 (250)
                      +|+..... .........+++|+.|+.+++++++. +. .++|++||..+++..        ..+..+...|+  .+|..
T Consensus        80 ~a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~--~sK~~  156 (317)
T TIGR01181        80 FAAESHVD-RSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYS--ASKAA  156 (317)
T ss_pred             cccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchH--HHHHH
Confidence            99976421 11223344668999999999998853 33 389999998877632        12233444566  55555


Q ss_pred             HHHHH----HhcCCCEEEEecceEEe
Q 025619          228 GEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +|.++    ++.+++++++||+.+||
T Consensus       157 ~e~~~~~~~~~~~~~~~i~R~~~i~G  182 (317)
T TIGR01181       157 SDHLVRAYHRTYGLPALITRCSNNYG  182 (317)
T ss_pred             HHHHHHHHHHHhCCCeEEEEeccccC
Confidence            66544    45799999999999986

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.2e-20  Score=154.91  Aligned_cols=161  Identities=17%  Similarity=0.111  Sum_probs=114.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi~  157 (250)
                      +|+++||||+|+||++++++|+++|++|++++|++++.+++.+   ..++.++.+|++|.+++++++  +  +++|+|||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~   77 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV   77 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence            3689999999999999999999999999999999876655432   235678889999998887643  1  36999999


Q ss_pred             cCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHH
Q 025619          158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~  228 (250)
                      |||......     ...++....+++|+.++.++++++    +.+.++++++||..+.... .+......|+.  +|.++
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~-~~~~~~~~Y~~--sK~a~  154 (225)
T PRK08177         78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVEL-PDGGEMPLYKA--SKAAL  154 (225)
T ss_pred             cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCcccccc-CCCCCccchHH--HHHHH
Confidence            999863211     112223456688999999988876    2344789999987654321 11122334554  44444


Q ss_pred             HH-------HHHhcCCCEEEEecceEE
Q 025619          229 ED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       229 e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                      +.       ++...+|+++.|+||++-
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~  181 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVK  181 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCcee
Confidence            43       334578999999999874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.84  E-value=2.4e-20  Score=158.60  Aligned_cols=162  Identities=12%  Similarity=0.075  Sum_probs=110.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh----------
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI----------  148 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~----------  148 (250)
                      ++++||||+||||++++++|+++|++|++++|+ +++++.+.+++.   ...+.++.+|++|.+++.+++          
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            479999999999999999999999999998654 555555433321   235667899999998663211          


Q ss_pred             hCCCcEEEEcCcCCCcCCC---CCCC-----------CCCcceehHHHHHHHHHHc----c-C------CCCeEEEEccC
Q 025619          149 FEGVTHVICCTGTTAFPSR---RWDG-----------DNTPEKVDWEGVRNLVSAL----P-S------SLKRIVLVSSV  203 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~---~~~~-----------~~~~~~~N~~g~~~l~~a~----~-~------~~~~iV~iSS~  203 (250)
                      ++++|+||||||.......   ++.+           ....+++|+.++..+++++    + .      ..++||++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            4689999999997542111   1110           1234688999999988865    1 1      12478999887


Q ss_pred             cccccCCCCcchhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          204 GVTKFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       204 ~~~~~~~~~~~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+.    .+......|+.+|..     +.+..++...||++++|+||++.
T Consensus       162 ~~~----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~  207 (267)
T TIGR02685       162 MTD----QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSL  207 (267)
T ss_pred             hcc----CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCcc
Confidence            765    234445567655542     12223445679999999999873

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.84  E-value=3.6e-21  Score=159.99  Aligned_cols=158  Identities=22%  Similarity=0.335  Sum_probs=119.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCcCC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTT  162 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag~~  162 (250)
                      ||||||+|+||++++++|+++|+.|+.+.|+.........   ..+++++.+|+.|.+.++++ +.  ++|+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~~~~~~~~~dl~~~~~~~~~-~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---KLNVEFVIGDLTDKEQLEKL-LEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---HTTEEEEESETTSHHHHHHH-HHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---cceEEEEEeecccccccccc-ccccCceEEEEeeccc
Confidence            7999999999999999999999999988887654432221   12788999999999999876 44  579999999975


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHH--
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV--  232 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~--  232 (250)
                      . ....+......++.|+.++.+++++++ .+.+++|++||..+|+..       +.+..+.+.|+.  +|...|+++  
T Consensus        77 ~-~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~--~K~~~e~~~~~  153 (236)
T PF01370_consen   77 S-NPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGA--SKRAAEELLRD  153 (236)
T ss_dssp             S-HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHH--HHHHHHHHHHH
T ss_pred             c-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence            3 111122344566889999999999985 577899999999888743       222345566664  455555444  


Q ss_pred             --HhcCCCEEEEecceEEe
Q 025619          233 --QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 --~~~gi~~~~vrPg~v~~  249 (250)
                        +..+++++++||+.+||
T Consensus       154 ~~~~~~~~~~~~R~~~vyG  172 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYG  172 (236)
T ss_dssp             HHHHHTSEEEEEEESEEES
T ss_pred             ccccccccccccccccccc
Confidence              45699999999999997

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.7e-20  Score=162.82  Aligned_cols=162  Identities=17%  Similarity=0.074  Sum_probs=115.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----~~  150 (250)
                      ++++|+++||||+||||++++++|+++|++|++.+++. +..+++.+++.  +.++.++.+|++|.+++++++     ++
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999998753 33433333221  346788999999998887643     46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc----C--------CCCeEEEEccCcccccCCCCcch
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--------SLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~----~--------~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                      ++|+||||||......   ...++....+++|+.|+.++++++.    .        ..++||++||..+...    ...
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~  164 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG----PVG  164 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC----CCC
Confidence            8999999999864221   1112223456889999999988651    1        1268999999877632    122


Q ss_pred             hhHHHHHHHHHHHH-------HHHHhcCCCEEEEecce
Q 025619          216 MNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCI  246 (250)
Q Consensus       216 ~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~  246 (250)
                      ...|+.+|  ..++       .++..+||++++|+||.
T Consensus       165 ~~~Y~asK--aal~~l~~~la~e~~~~gI~vn~i~Pg~  200 (306)
T PRK07792        165 QANYGAAK--AGITALTLSAARALGRYGVRANAICPRA  200 (306)
T ss_pred             CchHHHHH--HHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence            33555444  3333       34456799999999984

>TIGR02415 23BDH acetoin reductases

Probab=99.84  E-value=1.4e-20  Score=158.50  Aligned_cols=160  Identities=17%  Similarity=0.157  Sum_probs=114.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      |+++||||+|+||.+++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|++++.+++      ++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            589999999999999999999999999999999776655433222  345788999999999887653      457899


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      ||||||......   .+++..+..+++|+.++..+++++    + .+ .+++|++||..+..+    .+....|+.+|  
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK--  154 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG----NPILSAYSSTK--  154 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC----CCCCcchHHHH--
Confidence            999999754211   111222345689999988877655    2 22 379999999777632    22344555444  


Q ss_pred             HHHH-------HHHHhcCCCEEEEecceEE
Q 025619          226 KMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..++       .++...|+++++++||++-
T Consensus       155 ~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~  184 (254)
T TIGR02415       155 FAVRGLTQTAAQELAPKGITVNAYCPGIVK  184 (254)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence            3333       2334468999999999863

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-20  Score=158.10  Aligned_cols=160  Identities=13%  Similarity=0.075  Sum_probs=109.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+++|+++||||+||||++++++|+++|++|++++|+.. ..+...    ......+.+|++|.+++++. ++++|++||
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~-~~~iDilVn   85 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND----ESPNEWIKWECGKEESLDKQ-LASLDVLIL   85 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc----cCCCeEEEeeCCCHHHHHHh-cCCCCEEEE
Confidence            567899999999999999999999999999999999863 222111    11235788999999988864 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc----cC----CCCeEEEEccCcccccCCCCcchhhHHHHHHHHH---
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----PS----SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK---  226 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~----~~----~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~---  226 (250)
                      |||.......++++....+++|+.|+.++++++    .+    +.+.++..||.+...+     .....|+.+|...   
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-----~~~~~Y~aSKaal~~~  160 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-----ALSPSYEISKRLIGQL  160 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-----CCCchhHHHHHHHHHH
Confidence            999754322223344556799999999999876    11    1233444455444321     1234566555431   


Q ss_pred             -HHHH----HHHhcCCCEEEEecceEE
Q 025619          227 -MGED----FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 -~~e~----~~~~~gi~~~~vrPg~v~  248 (250)
                       .+.+    +....++.++.+.||.+.
T Consensus       161 ~~l~~~l~~e~~~~~i~v~~~~pg~~~  187 (245)
T PRK12367        161 VSLKKNLLDKNERKKLIIRKLILGPFR  187 (245)
T ss_pred             HHHHHHHHHhhcccccEEEEecCCCcc
Confidence             1112    224578999999999863

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=3.5e-20  Score=155.59  Aligned_cols=163  Identities=15%  Similarity=0.151  Sum_probs=115.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++++++||||+|+||.++++.|+++|++|++++|+++++++..+++.  ..++..+++|++|.+++++++      ++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3578899999999999999999999999999999999877665543322  346788999999988876543      35


Q ss_pred             CCcEEEEcCcCCCcCC------------CCCCCCCCcceehHHHHHHHHHHc-----cC-CCCeEEEEccCcccccCCCC
Q 025619          151 GVTHVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~------------~~~~~~~~~~~~N~~g~~~l~~a~-----~~-~~~~iV~iSS~~~~~~~~~~  212 (250)
                      ++|+||||||......            ..++.....+++|+.|+.++.+++     +. ..++||++||...++.    
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~----  157 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN----  157 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC----
Confidence            7899999999643211            001111234578999988777644     22 3467999999866532    


Q ss_pred             cchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          213 WSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                       .....|+.+  |.+++       .++.+.|++++.++||++.
T Consensus       158 -~~~~~Y~~s--K~a~~~l~~~la~~~~~~~i~v~~v~pg~v~  197 (253)
T PRK08217        158 -MGQTNYSAS--KAGVAAMTVTWAKELARYGIRVAAIAPGVIE  197 (253)
T ss_pred             -CCCchhHHH--HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence             223455544  44333       3344579999999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-20  Score=156.15  Aligned_cols=156  Identities=16%  Similarity=0.144  Sum_probs=112.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-------h---CCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------F---EGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------~---~~~  152 (250)
                      ++++||||+||||++++++|+++|++|++++|+.++..  .+. ...++.++++|++|.+++++++       +   +++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCc
Confidence            48999999999999999999999999999999865421  111 1346788999999999887632       1   268


Q ss_pred             cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |++|||||......    .+++.....+++|+.|+..+.+.+    + .+.++||++||..++.    +..+...|+.  
T Consensus        79 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~--  152 (243)
T PRK07023         79 VLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN----AYAGWSVYCA--  152 (243)
T ss_pred             eEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC----CCCCchHHHH--
Confidence            99999999754211    112223456789999977776654    2 3567999999988773    3334455654  


Q ss_pred             HHHHHHHHHH------hcCCCEEEEecceE
Q 025619          224 YKKMGEDFVQ------KSGLPFTIISLCIY  247 (250)
Q Consensus       224 ~k~~~e~~~~------~~gi~~~~vrPg~v  247 (250)
                      +|...+.+.+      ..|+++++|+||++
T Consensus       153 sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~  182 (243)
T PRK07023        153 TKAALDHHARAVALDANRALRIVSLAPGVV  182 (243)
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence            4555554432      45899999999987

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.84  E-value=2.4e-20  Score=155.94  Aligned_cols=163  Identities=18%  Similarity=0.149  Sum_probs=114.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcC--CCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .|+++||||+|+||++++++|+++|++|++++|+.+ ..++..+..  ...++.++.+|++|.+++.+++      ++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999853 222222111  1346888999999999887654      3579


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+++..+..+++|+.++.++++++    + .+.++||++||..++.+    ......|+.+|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~----~~~~~~Y~~sK~  157 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG----QFGQTNYSAAKA  157 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC----CCCChHHHHHHH
Confidence            99999999764211   112223345578999988886654    2 45679999999887742    222345555443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...|+++++++||++.
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~  186 (245)
T PRK12824        158 GMIGFTKALASEGARYGITVNCIAPGYIA  186 (245)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEEcccC
Confidence                 122233455679999999999875

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.83  E-value=1.4e-20  Score=161.38  Aligned_cols=143  Identities=19%  Similarity=0.190  Sum_probs=111.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag~  161 (250)
                      +||||||+|+||++++++|+++|++|++++|.                   .+|+.|.++++++ ++  ++|+|||+|+.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~-~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERL-LRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHH-HHhCCCCEEEECCcc
Confidence            48999999999999999999999999999885                   3788999888875 44  46999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHHh
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      ...+. ........+++|+.++.++++++++...++|++||..+|+..       +.+..+.+.|+  ++|..+|++++.
T Consensus        61 ~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~--~~K~~~E~~~~~  137 (287)
T TIGR01214        61 TDVDG-AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYREDDATNPLNVYG--QSKLAGEQAIRA  137 (287)
T ss_pred             ccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh--HHHHHHHHHHHH
Confidence            54221 112233456889999999999985433489999999887531       12223344554  778889999988


Q ss_pred             cCCCEEEEecceEEe
Q 025619          235 SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ~gi~~~~vrPg~v~~  249 (250)
                      .+.+++++||+.+||
T Consensus       138 ~~~~~~ilR~~~v~G  152 (287)
T TIGR01214       138 AGPNALIVRTSWLYG  152 (287)
T ss_pred             hCCCeEEEEeeeccc
Confidence            899999999999986

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.83  E-value=4.1e-20  Score=162.17  Aligned_cols=164  Identities=21%  Similarity=0.235  Sum_probs=116.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh---hCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~  158 (250)
                      |+||||||+|+||++++++|+++|++|++++|..+.....   .......++.++.+|++|.+++.+++- .++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            3799999999999999999999999999987653221111   111113356788999999998886532 269999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCc-chhhHHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPW-SIMNLFGVLKYKKMGE  229 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~-~~~~~y~~~k~k~~~e  229 (250)
                      |+..... .........+++|+.++.+++++++ .++++||++||..+|+..       +.+. .+...|+  .+|..+|
T Consensus        81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~--~sK~~~E  157 (338)
T PRK10675         81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYG--KSKLMVE  157 (338)
T ss_pred             Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhH--HHHHHHH
Confidence            9876422 1122334466889999999999985 578899999999887632       1122 2344555  6677777


Q ss_pred             HHHHh-----cCCCEEEEecceEEe
Q 025619          230 DFVQK-----SGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~~~-----~gi~~~~vrPg~v~~  249 (250)
                      ++++.     .+++++++|++.+||
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~g  182 (338)
T PRK10675        158 QILTDLQKAQPDWSIALLRYFNPVG  182 (338)
T ss_pred             HHHHHHHHhcCCCcEEEEEeeeecC
Confidence            66542     378999999887765

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.83  E-value=2.9e-20  Score=155.21  Aligned_cols=162  Identities=19%  Similarity=0.207  Sum_probs=112.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      |++|||||+|+||++++++|+++|++|+++.| +++..++..++..  ..++.++.+|++|++++++++      ++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            58999999999999999999999999999988 5554443322211  346888999999998877543      45799


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      +||||||......   .+++.....+++|+.++..+++++     +.+.++||++||..+..+    ......|+.+|..
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----~~~~~~y~~sk~a  156 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG----QFGQTNYSAAKAG  156 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC----CCCcchhHHHHHH
Confidence            9999999754211   111122334578999988876654     245679999999766532    2233455554431


Q ss_pred             -----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 -----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 -----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           +.+.+++...|++++.++||++.
T Consensus       157 ~~~~~~~la~~~~~~~i~v~~i~pg~~~  184 (242)
T TIGR01829       157 MIGFTKALAQEGATKGVTVNTISPGYIA  184 (242)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeeCCCc
Confidence                 12233445579999999999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=6.6e-20  Score=154.51  Aligned_cols=157  Identities=20%  Similarity=0.188  Sum_probs=114.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-------hCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------~~~~D~  154 (250)
                      +|+++||||+|+||.++++.|+++|++|++++|+.++.+.+.+    .+++.+++|++|.+++++++       .+++|.
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            4689999999999999999999999999999999887766542    25778999999988776533       156899


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHH----Hc-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVS----AL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~----a~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      +|||||......   ..++..+..+++|+.|+.++.+    .+ +.+.+++|++||..+..+    ......|+.+|.  
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~Y~~sK~--  151 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS----TPGRGAYAASKY--  151 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC----CCCccHHHHHHH--
Confidence            999999754211   1222233466889999887644    44 346689999999866532    233455665443  


Q ss_pred             HHH-------HHHHhcCCCEEEEecceEE
Q 025619          227 MGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .++       .++...|+++++++||.+.
T Consensus       152 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~  180 (256)
T PRK08017        152 ALEAWSDALRMELRHSGIKVSLIEPGPIR  180 (256)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeCCCcc
Confidence            333       3345679999999999874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.83  E-value=4.1e-20  Score=155.16  Aligned_cols=162  Identities=17%  Similarity=0.088  Sum_probs=111.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +|+++||||+||||+++++.|+++|++|+++. |++++.+.+.+.+.  ..++.++++|++|.+++++++      ++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999988764 56665554433221  346889999999998887643      3579


Q ss_pred             cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-c----CC---CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-P----SS---LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-~----~~---~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||......    ...++....+++|+.++..+++++ +    .+   .++||++||.++......   ....|+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---~~~~Y~  158 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN---EYVDYA  158 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC---CCcccH
Confidence            99999999754211    111112334688999998887644 1    11   357999999876532111   112455


Q ss_pred             HHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          221 VLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|  ..++       .++...|+++++++||++.
T Consensus       159 ~sK--~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~  191 (248)
T PRK06947        159 GSK--GAVDTLTLGLAKELGPHGVRVNAVRPGLIE  191 (248)
T ss_pred             hhH--HHHHHHHHHHHHHhhhhCcEEEEEeccCcc
Confidence            444  3333       3344568999999999975

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=3.2e-20  Score=154.75  Aligned_cols=168  Identities=16%  Similarity=0.073  Sum_probs=116.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|+|+||||+|+||.++++.|+++|++|++++|++++.+.+.+... ..+++++++|++|.+++++++      +++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3568899999999999999999999999999999999887765533221 236788999999998887543      456


Q ss_pred             CcEEEEcCcCCCcCC-CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH-
Q 025619          152 VTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK-  226 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~-  226 (250)
                      +|.+||++|...... .+.+..+..+++|+.++.++++.+.   ...+++|++||..+...   +......|+.+|... 
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---~~~~~~~Y~~sK~~~~  158 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK---ASPDQLSYAVAKAGLA  158 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc---CCCCchHHHHHHHHHH
Confidence            899999998653211 1111123345788999888887652   22368999999766321   222334555444311 


Q ss_pred             ----HHHHHHHhcCCCEEEEecceEEe
Q 025619          227 ----MGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ----~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                          .+..++...|+++++++||++++
T Consensus       159 ~~~~~~~~~~~~~gi~v~~i~pg~v~~  185 (238)
T PRK05786        159 KAVEILASELLGRGIRVNGIAPTTISG  185 (238)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCccCC
Confidence                12233445699999999999864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.83  E-value=9.1e-20  Score=152.67  Aligned_cols=163  Identities=15%  Similarity=0.046  Sum_probs=112.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +|+++||||+|+||++++++|+++|++|+++ .|++++.++...++.  ..++.++++|++|++++++++      ++++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999874 677666554433221  345788999999999888653      4578


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc-----cC---CCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL-----PS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~-----~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||.......    .+++....+++|+.++.++++++     +.   ..++||++||..++.+...   ....|+
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---~~~~Y~  157 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---EYVDYA  157 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---cccchH
Confidence            999999997532111    11122345688999998877654     11   2467999999877542211   112455


Q ss_pred             HHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|  ..++       .++.+.|+++++++||++++
T Consensus       158 ~sK--~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~  191 (247)
T PRK09730        158 ASK--GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYT  191 (247)
T ss_pred             hHH--HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcC
Confidence            444  3333       23345799999999999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.6e-20  Score=156.27  Aligned_cols=163  Identities=13%  Similarity=0.049  Sum_probs=112.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +|++|||||+|+||++++++|+++|++|+++. |++++.+...+.+.  ..++.++++|++|.+++.+++      ++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999988876 44444443322221  345778999999998888654      3579


Q ss_pred             cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHcc-----CC---CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SS---LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~-----~~---~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||......    ..+++....+++|+.++.++++++.     ..   .++||++||..+.......   ...|+
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~---~~~Y~  158 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE---YIDYA  158 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC---ccchH
Confidence            99999999764211    1112223456899999999887651     11   3579999998765322110   12355


Q ss_pred             HHHHHHHHHH-------HHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      .  +|..++.       ++.+.||++++++||++++
T Consensus       159 ~--sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~  192 (248)
T PRK06123        159 A--SKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYT  192 (248)
T ss_pred             H--HHHHHHHHHHHHHHHhcccCeEEEEEecCcccC
Confidence            4  4444443       3345699999999999864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.83  E-value=3.3e-20  Score=156.81  Aligned_cols=161  Identities=16%  Similarity=0.078  Sum_probs=113.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------h
Q 025619           84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~----~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++||||++|||.+++++|++    +|++|++++|+.++++++.+++.    ..++.++.+|++|.+++++++      +
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    79999999999888776654332    235788999999999887643      1


Q ss_pred             CC----CcEEEEcCcCCCcCC---C---CCCCCCCcceehHHHHHHHHHHc----c-C-C-CCeEEEEccCcccccCCCC
Q 025619          150 EG----VTHVICCTGTTAFPS---R---RWDGDNTPEKVDWEGVRNLVSAL----P-S-S-LKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       150 ~~----~D~vi~~Ag~~~~~~---~---~~~~~~~~~~~N~~g~~~l~~a~----~-~-~-~~~iV~iSS~~~~~~~~~~  212 (250)
                      +.    .|+||||||......   .   +++..+..+++|+.|+..+++++    + . + .++||++||..+..    +
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----~  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----P  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----C
Confidence            21    369999999753211   1   11222456789999988887755    2 2 2 36899999988763    3


Q ss_pred             cchhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          213 WSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+....|+.+|..     +.+..++...||+++.++||++-
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~  198 (256)
T TIGR01500       158 FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLD  198 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Confidence            3334556544431     12223445579999999999873

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.5e-20  Score=156.65  Aligned_cols=165  Identities=13%  Similarity=0.130  Sum_probs=117.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|+++||||+|+||++++++|+++|++ |++++|++++.+...+.+.  ..++.++.+|++|++++.+++      +
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999 9999998776654332221  345778899999998887643      3


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||.......   ..+.....+++|+.++.++++++     +.+ .+++|++||..++...    +....|+
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----~~~~~Y~  158 (260)
T PRK06198         83 GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ----PFLAAYC  158 (260)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC----CCcchhH
Confidence            579999999997542111   11112334688999999988765     122 4689999998877422    2234565


Q ss_pred             HHHHHHHHHH-------HHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|  ..++.       ++...+++++.++||++.+
T Consensus       159 ~sK--~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t  192 (260)
T PRK06198        159 ASK--GALATLTRNAAYALLRNRIRVNGLNIGWMAT  192 (260)
T ss_pred             HHH--HHHHHHHHHHHHHhcccCeEEEEEeeccccC
Confidence            444  33332       3345689999999999753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.83  E-value=4.9e-20  Score=154.03  Aligned_cols=164  Identities=20%  Similarity=0.205  Sum_probs=113.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++.+|+++||||+|+||++++++|+++|++|+++.|+.++ .+...+++  ...++.++.+|++|.+++.+++      +
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999888887543 33322221  1346788899999999887643      3


Q ss_pred             CCCcEEEEcCcCCCcCCC-C--CCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR-R--WDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~-~--~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+|||+||....... +  .+..+..+++|+.++.++++++.     .+.+++|++||.......    .....|+.
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~----~~~~~y~~  157 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN----PGQANYAA  157 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC----CCCchhHH
Confidence            579999999997642211 1  11122345789999999988762     355789999997655321    12334544


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +  |.+++       +.++..++++++++||++.
T Consensus       158 s--k~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~  189 (248)
T PRK05557        158 S--KAGVIGFTKSLARELASRGITVNAVAPGFIE  189 (248)
T ss_pred             H--HHHHHHHHHHHHHHhhhhCeEEEEEecCccC
Confidence            3  43333       3334569999999999873

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=3.9e-20  Score=155.38  Aligned_cols=163  Identities=18%  Similarity=0.139  Sum_probs=114.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCC--CccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTR--NPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~--d~~~~~~~~-----  148 (250)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.++.+.+.+++.   ..++.++.+|++  +.+++++++     
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999877655543321   345678888886  444444322     


Q ss_pred             -hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||......    ...+..+..+++|+.|+.++++++     +.+.++||++||..+..+    ......
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----~~~~~~  164 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG----RANWGA  164 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC----CCCCcc
Confidence             468999999999753211    111122345689999988888865     246789999999876532    222335


Q ss_pred             HHHHHHHHHHHH-------HHHhcCCCEEEEecceE
Q 025619          219 FGVLKYKKMGED-------FVQKSGLPFTIISLCIY  247 (250)
Q Consensus       219 y~~~k~k~~~e~-------~~~~~gi~~~~vrPg~v  247 (250)
                      |+.+  |.+++.       .+...|+++++++||++
T Consensus       165 Y~~s--K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v  198 (247)
T PRK08945        165 YAVS--KFATEGMMQVLADEYQGTNLRVNCINPGGT  198 (247)
T ss_pred             cHHH--HHHHHHHHHHHHHHhcccCEEEEEEecCCc
Confidence            5544  444333       23346899999999987

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.5e-20  Score=151.56  Aligned_cols=154  Identities=13%  Similarity=0.076  Sum_probs=110.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~v  155 (250)
                      .+|+++||||+|+||++++++|+++|++|++++|+.++.        . ..+++.+|++|.+++++++     ..++|+|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------F-PGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------c-CceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            468999999999999999999999999999999987541        0 1257899999998887643     1268999


Q ss_pred             EEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          156 ICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       156 i~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      |||||.......   ++++....+++|+.++.++.+++     +.+.++||++||...++.     .....|+.+|..  
T Consensus        73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~Y~~sK~a~~  147 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA-----LDRTSYSAAKSALV  147 (234)
T ss_pred             EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-----CCchHHHHHHHHHH
Confidence            999998643211   11222345578999988887765     246789999999876532     223456544431  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         +....++.+.|+++++|+||++.
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~  173 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIE  173 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCccc
Confidence               12223445679999999999874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.82  E-value=8.1e-20  Score=173.76  Aligned_cols=164  Identities=14%  Similarity=0.118  Sum_probs=117.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++.+.+.+    ....+..+++|++|.+++++++      
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999987766544332    1235678999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 FEGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++++|+||||||........   .+.....+++|+.++..+.+++    + .+ .++||++||..+..+    ......|
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~----~~~~~aY  566 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA----GKNASAY  566 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC----CCCCHHH
Confidence            46899999999975422111   1112334578999887776544    2 23 468999999876532    2234566


Q ss_pred             HHHHHHHHHHH-------HHHhcCCCEEEEecceEE
Q 025619          220 GVLKYKKMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|  .+.+.       ++...||++++|+||.|.
T Consensus       567 ~aSK--aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       567 SAAK--AAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             HHHH--HHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence            6544  44432       334568999999999875

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.82  E-value=3.5e-20  Score=154.75  Aligned_cols=160  Identities=14%  Similarity=0.095  Sum_probs=113.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      |+||||+||||.+++++|+++|++|++++|+ .++.+.+.+++.  ..++.++++|++|.+++.+++      ++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999998865 344444333221  346889999999999887643      4578999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      |||||......   ..+++....+++|+.++.++++++     + .+.++||++||..+..+    .+....|+.+|.. 
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----~~~~~~Y~~sK~a~  156 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG----NRGQVNYSAAKAGL  156 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC----CCCCcchHHHHHHH
Confidence            99999764221   222233446688999999988864     2 35579999999876632    2233455544431 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          +.+..++...||+++.++||++.
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~  183 (239)
T TIGR01831       157 IGATKALAVELAKRKITVNCIAPGLID  183 (239)
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEEccCc
Confidence                22334445679999999999874

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08324 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.3e-19  Score=172.97  Aligned_cols=164  Identities=17%  Similarity=0.168  Sum_probs=120.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .+.+|++|||||+|+||++++++|+++|++|++++|+.++++...+.+.. .++.++.+|++|++++++++      +++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999999877665443321 36788999999999887643      468


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CCC-CeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||.......   ..+.....+++|+.|+.++++++    + .+. ++||++||..+..+    ......|+.+
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~----~~~~~~Y~as  574 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP----GPNFGAYGAA  574 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC----CCCcHHHHHH
Confidence            9999999997642211   11122345588999999997765    2 343 79999999877632    2234456544


Q ss_pred             HHHHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          223 KYKKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                        |..++.+       +...||++++|+||.|+
T Consensus       575 --Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~  605 (681)
T PRK08324        575 --KAAELHLVRQLALELGPDGIRVNGVNPDAVV  605 (681)
T ss_pred             --HHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence              4444433       23468999999999995

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.82  E-value=1e-19  Score=153.49  Aligned_cols=159  Identities=23%  Similarity=0.283  Sum_probs=95.1

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEecChhh---HhhhhCcC------------CCCCeeEEEeeCCCcc-Ccch--
Q 025619           87 VAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEK---ATTLFGKQ------------DEETLQVCKGDTRNPK-DLDP--  146 (250)
Q Consensus        87 VTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~---~~~~~~~~------------~~~~~~~v~~Dl~d~~-~~~~--  146 (250)
                      ||||||++|++++++|++++.  +|+++.|..+.   .+.+.+.+            ...+++++.+|++++. .+..  
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997632   22221111            1468999999999865 1221  


Q ss_pred             --hhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCc----------
Q 025619          147 --AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW----------  213 (250)
Q Consensus       147 --~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~----------  213 (250)
                        .+.+.+|+|||||+...+..    +..+..++|+.|+.++++.+. ...++++|+||..+.+......          
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~----~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNA----PYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred             hhccccccceeeecchhhhhcc----cchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence              12468999999999876432    344567899999999999885 4556999999943433211100          


Q ss_pred             ----chhhHHHHHHHHHHHHHHHHh----cCCCEEEEecceEEe
Q 025619          214 ----SIMNLFGVLKYKKMGEDFVQK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       214 ----~~~~~y~~~k~k~~~e~~~~~----~gi~~~~vrPg~v~~  249 (250)
                          ......+|.++|..+|+.+++    .|++++++|||.|+|
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence                011123677888888877753    499999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.82  E-value=7.3e-20  Score=153.69  Aligned_cols=159  Identities=14%  Similarity=0.170  Sum_probs=108.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++||||+||||+++++.|+++|++|++++|+ .++++.+.+.+.    ...+..+++|++|.+++++++      ++++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999999999999999999998 565555443321    123456889999999887643      4689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHH----HHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEG----VRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g----~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   ..++....+++|+.+    +..++++++ .+.++||++||..++...    .....|+.+| 
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~----~~~~~Y~~sK-  155 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE----PDYTAYNASK-  155 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC----CCCchhHHHH-
Confidence            999999997643211   111223345788884    555555554 456899999998887432    2234555444 


Q ss_pred             HHHHHH-------HHHhc--CCCEEEEecceEE
Q 025619          225 KKMGED-------FVQKS--GLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~-------~~~~~--gi~~~~vrPg~v~  248 (250)
                       ...+.       ++...  +++++.|+||++.
T Consensus       156 -~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~  187 (251)
T PRK07069        156 -AAVASLTKSIALDCARRGLDVRCNSIHPTFIR  187 (251)
T ss_pred             -HHHHHHHHHHHHHhcccCCcEEEEEEeecccC
Confidence             33332       22223  5899999999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=1.5e-20  Score=149.89  Aligned_cols=158  Identities=18%  Similarity=0.168  Sum_probs=122.5

Q ss_pred             CCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-------hCCCc
Q 025619           82 SKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------~~~~D  153 (250)
                      .|+|||||++ ||||.+++++|.++|+.|++++|+.+....+..   ..++...+.|+++++++....       .|.+|
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~---~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI---QFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH---hhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            4689999864 899999999999999999999999888776653   236888999999999887532       56799


Q ss_pred             EEEEcCcCCCc-CC--CCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          154 HVICCTGTTAF-PS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       154 ~vi~~Ag~~~~-~~--~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      +++||||..-. |.  .+....+..+++|+.|..++.+++.    +..+.||+++|..++    .|++..+.|.  ++|+
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~----vpfpf~~iYs--AsKA  157 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV----VPFPFGSIYS--ASKA  157 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE----eccchhhhhh--HHHH
Confidence            99999997532 22  2223346678999999999988872    345799999999998    5666666665  4555


Q ss_pred             HHHHH-------HHhcCCCEEEEecceEE
Q 025619          227 MGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                      ++.++       ++..||+|+.+-||.|-
T Consensus       158 Aihay~~tLrlEl~PFgv~Vin~itGGv~  186 (289)
T KOG1209|consen  158 AIHAYARTLRLELKPFGVRVINAITGGVA  186 (289)
T ss_pred             HHHHhhhhcEEeeeccccEEEEeccccee
Confidence            55443       46689999999999875

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.4e-19  Score=172.02  Aligned_cols=159  Identities=21%  Similarity=0.298  Sum_probs=117.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHH--HCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCcc------CcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLL--SRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPK------DLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~--~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~------~~~~~~~~~~  152 (250)
                      |+||||||||+||++++++|+  ++|++|++++|+...  .+.+.......+++++.+|++|++      .+++  +.++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~--l~~~   78 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE--LGDI   78 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH--hcCC
Confidence            379999999999999999999  579999999997532  222222222257889999999964      2332  3789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCc---------chhhHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW---------SIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~---------~~~~~y~~~  222 (250)
                      |+|||+||.....    .......++|+.|+.+++++++ .+.+++|++||..+++....+.         .+.+.  |.
T Consensus        79 D~Vih~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~--Y~  152 (657)
T PRK07201         79 DHVVHLAAIYDLT----ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTP--YH  152 (657)
T ss_pred             CEEEECceeecCC----CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCc--hH
Confidence            9999999975422    1223455889999999999885 5689999999998886322111         11233  55


Q ss_pred             HHHHHHHHHHH-hcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ-KSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~-~~gi~~~~vrPg~v~~  249 (250)
                      ++|.++|++++ ..|++++++||+.|||
T Consensus       153 ~sK~~~E~~~~~~~g~~~~ilRp~~v~G  180 (657)
T PRK07201        153 RTKFEAEKLVREECGLPWRVYRPAVVVG  180 (657)
T ss_pred             HHHHHHHHHHHHcCCCcEEEEcCCeeee
Confidence            78888888887 4789999999999987

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=1.8e-19  Score=151.42  Aligned_cols=164  Identities=13%  Similarity=0.123  Sum_probs=113.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++++++|||||+|+||++++++|+++|++|++..|+ .+..........  ..++..+.+|++|++++++++      +
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999887754 333322211111  235678899999999887643      3


Q ss_pred             CCCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|+||||||........   ....+..+++|+.++.++++++.   ...++||++||..++.    +..+...|+.+|
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK  158 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----PAYGLSIYGAMK  158 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC----CCCCchHHHHHH
Confidence            5799999999975422111   11113456889999888888762   2346899999988873    344456666554


Q ss_pred             HHHHHHHHH----Hh--cCCCEEEEecceEE
Q 025619          224 YKKMGEDFV----QK--SGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e~~~----~~--~gi~~~~vrPg~v~  248 (250)
                        ..++.+.    ++  .++++++++||++.
T Consensus       159 --~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~  187 (252)
T PRK06077        159 --AAVINLTKYLALELAPKIRVNAIAPGFVK  187 (252)
T ss_pred             --HHHHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence              3333222    11  28999999999874

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.81  E-value=7.2e-20  Score=158.76  Aligned_cols=152  Identities=14%  Similarity=0.196  Sum_probs=103.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhh-----CCCcEEE
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-----EGVTHVI  156 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~-----~~~D~vi  156 (250)
                      ||||||+|+||++++++|+++|++++++.|+.+.....        .....+|++|..+.+.   .++     +++|+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            89999999999999999999999877776654321111        1123456655433322   122     3799999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC-------CCcchhhHHHHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~k~~~e  229 (250)
                      |+||.....  .++ ....++.|+.++.++++++++...++|++||.++|+...       .+..|.+.|+.  +|..+|
T Consensus        74 h~A~~~~~~--~~~-~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~--sK~~~E  148 (308)
T PRK11150         74 HEGACSSTT--EWD-GKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGY--SKFLFD  148 (308)
T ss_pred             ECceecCCc--CCC-hHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHH--HHHHHH
Confidence            999864322  222 233568999999999999854334799999999887421       22334566664  455555


Q ss_pred             HHH----HhcCCCEEEEecceEEe
Q 025619          230 DFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +++    .+.+++++++||+.+||
T Consensus       149 ~~~~~~~~~~~~~~~~lR~~~vyG  172 (308)
T PRK11150        149 EYVRQILPEANSQICGFRYFNVYG  172 (308)
T ss_pred             HHHHHHHHHcCCCEEEEeeeeecC
Confidence            444    34699999999999987

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.81  E-value=6.3e-20  Score=158.54  Aligned_cols=144  Identities=17%  Similarity=0.090  Sum_probs=105.6

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcCcCCCc
Q 025619           86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGTTAF  164 (250)
Q Consensus        86 lVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~Ag~~~~  164 (250)
                      |||||+|+||++++++|+++|++|+++.+.                  ..+|++|.+++++.+- .++|+|||+|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence            699999999999999999999988766432                  1479999988886532 258999999997542


Q ss_pred             CCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-C----------Ccchhh-HHHHHHHHHHHH--
Q 025619          165 PSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-L----------PWSIMN-LFGVLKYKKMGE--  229 (250)
Q Consensus       165 ~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-~----------~~~~~~-~y~~~k~k~~~e--  229 (250)
                      .......+...++.|+.++.+++++++ .+++++|++||..+|+... .          +..+.+ .|+.+|  ...|  
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK--~~~e~~  140 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAK--IAGIKM  140 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHH--HHHHHH
Confidence            222222344567899999999999985 5788999999999887421 1          112222 366544  4444  


Q ss_pred             --HHHHhcCCCEEEEecceEEe
Q 025619          230 --DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 --~~~~~~gi~~~~vrPg~v~~  249 (250)
                        .+.+..+++++++||+.+||
T Consensus       141 ~~~~~~~~~~~~~~~R~~~vyG  162 (306)
T PLN02725        141 CQAYRIQYGWDAISGMPTNLYG  162 (306)
T ss_pred             HHHHHHHhCCCEEEEEecceeC
Confidence              34456799999999999997

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.81  E-value=2.6e-19  Score=155.66  Aligned_cols=163  Identities=22%  Similarity=0.280  Sum_probs=116.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~Ag~  161 (250)
                      +||||||+|+||++++++|+++|++|++++|..... +.+.......+++.+.+|++|.+++++++- .++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            489999999999999999999999999887643221 111111111257788999999999887532 379999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      .... .........++.|+.++.+++++++ .+.+++|++||...++..       +.+..+...|+  .+|..+|.+++
T Consensus        81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~--~sK~~~e~~~~  157 (328)
T TIGR01179        81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYG--RSKLMSERILR  157 (328)
T ss_pred             cCcc-hhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchH--HHHHHHHHHHH
Confidence            6422 2222344566889999999999884 567899999998887632       22233445555  45666665543


Q ss_pred             ----h-cCCCEEEEecceEEe
Q 025619          234 ----K-SGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ----~-~gi~~~~vrPg~v~~  249 (250)
                          + .+++++++||+.+||
T Consensus       158 ~~~~~~~~~~~~ilR~~~v~g  178 (328)
T TIGR01179       158 DLSKADPGLSYVILRYFNVAG  178 (328)
T ss_pred             HHHHhccCCCEEEEecCcccC
Confidence                3 689999999998876

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-19  Score=151.87  Aligned_cols=160  Identities=18%  Similarity=0.189  Sum_probs=111.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC--CC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE--GV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~--~~  152 (250)
                      ||+++||||+||||++++++|+++|++|++++|++ +.++++.+.. ..+++++++|++|.+++++++      ++  +.
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            36899999999999999999999999999999987 4444443322 356888999999999887643      11  12


Q ss_pred             --cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c--CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 --THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P--SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 --D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~--~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                        +++|||||......    ..++.....+++|+.++..+++.+    +  .+.++||++||..+.    .+++....|+
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~~~~~Y~  155 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK----NPYFGWSAYC  155 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc----CCCCCcHHHh
Confidence              28999999753211    112223345688999977776654    2  235689999998765    3444456666


Q ss_pred             HHHHHHHHHHHH---------HhcCCCEEEEecceEE
Q 025619          221 VLKYKKMGEDFV---------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k~~~e~~~---------~~~gi~~~~vrPg~v~  248 (250)
                      .+|.  +++.+.         +..+++++.|+||++-
T Consensus       156 ~sKa--a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~  190 (251)
T PRK06924        156 SSKA--GLDMFTQTVATEQEEEEYPVKIVAFSPGVMD  190 (251)
T ss_pred             HHHH--HHHHHHHHHHHHhhhcCCCeEEEEecCCccc
Confidence            5543  333222         2358999999999873

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.81  E-value=2.5e-19  Score=144.32  Aligned_cols=166  Identities=19%  Similarity=0.136  Sum_probs=113.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCeE-EEEecChhhH-hhhhCc-CCCCCeeEEEeeCCCccCcchhh--------h
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKS-RLLLRDPEKA-TTLFGK-QDEETLQVCKGDTRNPKDLDPAI--------F  149 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~-G~~V-~~~~R~~~~~-~~~~~~-~~~~~~~~v~~Dl~d~~~~~~~~--------~  149 (250)
                      .|.++||||++|||.-++++|++. |.++ +...|+++++ +++... ...+++++++.|+++.+++++++        .
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            457999999999999999999976 6655 4556778884 333221 23689999999999999988754        3


Q ss_pred             CCCcEEEEcCcCCCcCCCCCCC----CCCcceehHHHHHHHHHHc----cC-C-----------CCeEEEEccCcccccC
Q 025619          150 EGVTHVICCTGTTAFPSRRWDG----DNTPEKVDWEGVRNLVSAL----PS-S-----------LKRIVLVSSVGVTKFN  209 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~~----~~~~~~~N~~g~~~l~~a~----~~-~-----------~~~iV~iSS~~~~~~~  209 (250)
                      .++|++|||||+...-.....+    ..+.+++|..|+..+.+++    ++ .           ...||++||.++....
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            4799999999987521111111    1334589999988887765    11 1           2369999998876322


Q ss_pred             CCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          210 ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      . ...+..+|.++|+     .+.+...+++.+|-++.++||||-
T Consensus       163 ~-~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~  205 (249)
T KOG1611|consen  163 F-RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ  205 (249)
T ss_pred             C-CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence            2 2233445554443     223334556778999999999994

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.4e-19  Score=148.27  Aligned_cols=159  Identities=15%  Similarity=0.130  Sum_probs=110.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~  158 (250)
                      ++|++|||||+|+||++++++|+++ ++|++++|+.++.+++.+..  .+++++.+|++|.+++++++  ++++|+|||+
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4679999999999999999999999 99999999987765554322  35788999999999988754  2379999999


Q ss_pred             CcCCCcCCCCCC---CCCCcceehHHHHHHHHH----HccCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWD---GDNTPEKVDWEGVRNLVS----ALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       159 Ag~~~~~~~~~~---~~~~~~~~N~~g~~~l~~----a~~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      ||..........   .....+++|+.+..++.+    .++.+.+++|++||..++...    .....|+.+  |...+.+
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----~~~~~y~~~--K~a~~~~  152 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN----PGWGSYAAS--KFALRAL  152 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC----CCCchHHHH--HHHHHHH
Confidence            997542111111   112235778888555544    444556799999998876422    223455544  4444433


Q ss_pred             HH-----hcC-CCEEEEecceEE
Q 025619          232 VQ-----KSG-LPFTIISLCIYC  248 (250)
Q Consensus       232 ~~-----~~g-i~~~~vrPg~v~  248 (250)
                      .+     ..+ ++++.++||.+.
T Consensus       153 ~~~~~~~~~~~i~~~~i~pg~~~  175 (227)
T PRK08219        153 ADALREEEPGNVRVTSVHPGRTD  175 (227)
T ss_pred             HHHHHHHhcCCceEEEEecCCcc
Confidence            21     124 999999999764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.81  E-value=1.2e-19  Score=152.53  Aligned_cols=165  Identities=19%  Similarity=0.191  Sum_probs=114.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcC-C-C-CCeeEEEeeCCC-ccCcchhh----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQ-D-E-ETLQVCKGDTRN-PKDLDPAI----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~-~-~-~~~~~v~~Dl~d-~~~~~~~~----  148 (250)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.+.  .+.+.+.. . . ..+.+..+|+++ .++++.++    
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888887543  22222111 1 1 356778899998 77777543    


Q ss_pred             --hCCCcEEEEcCcCCCc--CC--CCCCCCCCcceehHHHHHHHHHHccCCCC--eEEEEccCcccccCCCCcchhhHHH
Q 025619          149 --FEGVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALPSSLK--RIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~a~~~~~~--~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                        ++++|++|||||....  +.  ...+..+..+++|+.|...+.+++.....  +||++||..+. .....   ...|+
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~---~~~Y~  157 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG---QAAYA  157 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---cchHH
Confidence              5779999999998652  11  11123345668899998888884422222  99999999886 32211   34555


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      .+|.     ...+..++...||+++.|.||++
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~  189 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPGYI  189 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence            4443     22233555678999999999954

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-19  Score=150.26  Aligned_cols=157  Identities=14%  Similarity=0.164  Sum_probs=115.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh--hCCCcEEEEcCcCC
Q 025619           86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTGTT  162 (250)
Q Consensus        86 lVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~Ag~~  162 (250)
                      +||||+||||++++++|+++|++|++++|++++++...+.+. ..+++++.+|++|.+++.+++  .+++|+||||||..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999999877665443322 346788999999999988754  45789999999975


Q ss_pred             CcCC---CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHh----
Q 025619          163 AFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK----  234 (250)
Q Consensus       163 ~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~----  234 (250)
                      ....   .+.++.+..+++|+.++.++.++.. .+.++||++||.+++.    +.++...|+.  +|.+++.+.+.    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~----~~~~~~~Y~~--sK~a~~~~~~~la~e  154 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR----PSASGVLQGA--INAALEALARGLALE  154 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC----CCCcchHHHH--HHHHHHHHHHHHHHH
Confidence            4221   1112234456889999999998543 3568999999998874    2333455654  44444433322    


Q ss_pred             -cCCCEEEEecceEE
Q 025619          235 -SGLPFTIISLCIYC  248 (250)
Q Consensus       235 -~gi~~~~vrPg~v~  248 (250)
                       .+++++.++||++-
T Consensus       155 ~~~irv~~i~pg~~~  169 (230)
T PRK07041        155 LAPVRVNTVSPGLVD  169 (230)
T ss_pred             hhCceEEEEeecccc
Confidence             35999999999863

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4e-19  Score=147.07  Aligned_cols=160  Identities=14%  Similarity=0.083  Sum_probs=114.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi~  157 (250)
                      ||+++||||+|+||++++++|+++|++|++++|++++.+++..    .+++++.+|++|.+++++++  +  +++|++||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            4689999999999999999999999999999999887766542    24668999999999888642  2  25999999


Q ss_pred             cCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHH
Q 025619          158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~  228 (250)
                      |+|......     ..+++.+..+++|+.++.++++++.    ...+++|++||..+..... +..+...|+  .+|...
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~~~~Y~--~sK~a~  153 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA-TGTTGWLYR--ASKAAL  153 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc-cCCCccccH--HhHHHH
Confidence            999863211     1222334567899999999998772    3346899999876543211 111112355  445555


Q ss_pred             HHHHH-----hcCCCEEEEecceEE
Q 025619          229 EDFVQ-----KSGLPFTIISLCIYC  248 (250)
Q Consensus       229 e~~~~-----~~gi~~~~vrPg~v~  248 (250)
                      +.+++     ..+++++.++||++.
T Consensus       154 ~~~~~~~~~~~~~i~v~~v~Pg~i~  178 (222)
T PRK06953        154 NDALRAASLQARHATCIALHPGWVR  178 (222)
T ss_pred             HHHHHHHhhhccCcEEEEECCCeee
Confidence            54443     247999999999985

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.2e-19  Score=146.14  Aligned_cols=145  Identities=20%  Similarity=0.183  Sum_probs=105.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~Ag  160 (250)
                      |+++||||+||||++++++|+++ ++|++++|+++               .+++|++|++++++++  ++++|+||||||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence            37999999999999999999999 99999998742               3679999999888654  458999999999


Q ss_pred             CCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-----HHHH
Q 025619          161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-----KMGE  229 (250)
Q Consensus       161 ~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-----~~~e  229 (250)
                      ......   ..+++..+.+++|+.++.++++++.   ...++|+++||..+..    +.+....|+.+|..     +.+.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~----~~~~~~~Y~~sK~a~~~~~~~la  140 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE----PIPGGASAATVNGALEGFVKAAA  140 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC----CCCCchHHHHHHHHHHHHHHHHH
Confidence            754221   1112223445789999999998762   2347899999987763    23344566655541     1122


Q ss_pred             HHHHhcCCCEEEEecceEE
Q 025619          230 DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       230 ~~~~~~gi~~~~vrPg~v~  248 (250)
                      .++ +.||+++.|+||++-
T Consensus       141 ~e~-~~gi~v~~i~Pg~v~  158 (199)
T PRK07578        141 LEL-PRGIRINVVSPTVLT  158 (199)
T ss_pred             HHc-cCCeEEEEEcCCccc
Confidence            233 579999999999873

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.80  E-value=2.9e-19  Score=157.48  Aligned_cols=159  Identities=21%  Similarity=0.290  Sum_probs=112.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhH------hhhhCcC-----C-C-CCeeEEEeeCCCcc------
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKA------TTLFGKQ-----D-E-ETLQVCKGDTRNPK------  142 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~------~~~~~~~-----~-~-~~~~~v~~Dl~d~~------  142 (250)
                      +||||||||+||++++++|+++|  ++|+++.|+.+..      ++..+..     . . .+++++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6799999986522      1111100     0 1 47889999998763      


Q ss_pred             CcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCC-------c-
Q 025619          143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELP-------W-  213 (250)
Q Consensus       143 ~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~-------~-  213 (250)
                      .... +.+++|+|||||+.....    .+.....++|+.|+.++++++. .+.+++|++||.++++.....       . 
T Consensus        81 ~~~~-~~~~~d~vih~a~~~~~~----~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~  155 (367)
T TIGR01746        81 EWER-LAENVDTIVHNGALVNWV----YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIV  155 (367)
T ss_pred             HHHH-HHhhCCEEEeCCcEeccC----CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccc
Confidence            2332 257899999999976421    1223345789999999999885 566789999999988642110       0 


Q ss_pred             ----chhhHHHHHHHHHHHHHHHHh---cCCCEEEEecceEEe
Q 025619          214 ----SIMNLFGVLKYKKMGEDFVQK---SGLPFTIISLCIYCI  249 (250)
Q Consensus       214 ----~~~~~y~~~k~k~~~e~~~~~---~gi~~~~vrPg~v~~  249 (250)
                          .....  |..+|..+|..++.   .|++++++|||.++|
T Consensus       156 ~~~~~~~~~--Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G  196 (367)
T TIGR01746       156 TPPPGLAGG--YAQSKWVAELLVREASDRGLPVTIVRPGRILG  196 (367)
T ss_pred             ccccccCCC--hHHHHHHHHHHHHHHHhcCCCEEEECCCceee
Confidence                11123  45667777766543   499999999999987

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.80  E-value=3.7e-20  Score=143.34  Aligned_cols=166  Identities=15%  Similarity=0.105  Sum_probs=127.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++.|++|++||+.-|||++++..|++.|++|++++|+++.+..+.++. ...++.+.+|+.+.+.+.+.+  ...+|.++
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-p~~I~Pi~~Dls~wea~~~~l~~v~pidgLV   82 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-PSLIIPIVGDLSAWEALFKLLVPVFPIDGLV   82 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-CcceeeeEecccHHHHHHHhhcccCchhhhh
Confidence            578999999999999999999999999999999999999998887654 234788999999988877764  34689999


Q ss_pred             EcCcCCCcC---CCCCCCCCCcceehHHHHHHHHHHc------cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          157 CCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       157 ~~Ag~~~~~---~~~~~~~~~~~~~N~~g~~~l~~a~------~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      ||||+....   +...++.++.+++|+.+..++.+..      +.-.+.||++||.+..    .++.....|+.+|.   
T Consensus        83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~----R~~~nHtvYcatKaALD  158 (245)
T KOG1207|consen   83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI----RPLDNHTVYCATKAALD  158 (245)
T ss_pred             ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc----cccCCceEEeecHHHHH
Confidence            999986421   1223345667799999988777753      2234579999999887    34555566664443   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                        .+.+..++....||++.+.|..||.
T Consensus       159 mlTk~lAlELGp~kIRVNsVNPTVVmT  185 (245)
T KOG1207|consen  159 MLTKCLALELGPQKIRVNSVNPTVVMT  185 (245)
T ss_pred             HHHHHHHHhhCcceeEeeccCCeEEEe
Confidence              2333455666789999999999985

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=3.6e-19  Score=153.81  Aligned_cols=165  Identities=12%  Similarity=0.061  Sum_probs=103.7

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChhhHhhhh------------CcCCCC-----CeeEEEeeCC
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLF------------GKQDEE-----TLQVCKGDTR  139 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~------------~~~~~~-----~~~~v~~Dl~  139 (250)
                      ++++|+++||||+  +|||++++++|+++|++|++.+|.+ .++...            ......     ++..+.+|++
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~   83 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD   83 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence            6789999999995  9999999999999999999977542 011100            000001     1111234444


Q ss_pred             CccC------------------cchhh------hCCCcEEEEcCcCCCc---C--CCCCCCCCCcceehHHHHHHHHHHc
Q 025619          140 NPKD------------------LDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       140 d~~~------------------~~~~~------~~~~D~vi~~Ag~~~~---~--~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      |.++                  +++++      ++++|+||||||....   +  ..++++.+..+++|+.|+.++++++
T Consensus        84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~  163 (299)
T PRK06300         84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF  163 (299)
T ss_pred             CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            4432                  33322      5789999999986421   1  1222334556689999999998876


Q ss_pred             c---CCCCeEEEEccCcccccCCCCcchh-hHHHHHHH-----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          191 P---SSLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       191 ~---~~~~~iV~iSS~~~~~~~~~~~~~~-~~y~~~k~-----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                      .   ...++||++||..+...    .+.. ..|+.+|.     .+.+..++.+ +||+++.|.||++-
T Consensus       164 ~p~m~~~G~ii~iss~~~~~~----~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~  227 (299)
T PRK06300        164 GPIMNPGGSTISLTYLASMRA----VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLA  227 (299)
T ss_pred             HHHhhcCCeEEEEeehhhcCc----CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCcc
Confidence            2   12368999998777532    2222 25665554     2233344544 59999999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.1e-18  Score=159.22  Aligned_cols=162  Identities=16%  Similarity=0.094  Sum_probs=116.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||+||||.+++++|+++|++|++++|..  +.++++.+++   +...+.+|++|.+++++++      ++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999998843  3344433322   3467899999998887643      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHccC-----CCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~-----~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   .+++.....+++|+.|+.++.+++..     ..++||++||..+...    ......|+.+
T Consensus       284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g----~~~~~~Y~as  359 (450)
T PRK08261        284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG----NRGQTNYAAS  359 (450)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC----CCCChHHHHH
Confidence            7999999999764221   11222334567899999999997732     3379999999877632    2233456655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      |.     ...+..++++.|+++++|+||.+
T Consensus       360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i  389 (450)
T PRK08261        360 KAGVIGLVQALAPLLAERGITINAVAPGFI  389 (450)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEeCcC
Confidence            53     22333455668999999999986

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.79  E-value=1.2e-18  Score=147.38  Aligned_cols=163  Identities=23%  Similarity=0.266  Sum_probs=123.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----hhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhC--CCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE--GVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~--~~D~  154 (250)
                      +++||||||+|+||++++.+|+++|+.|++++.-.    +.+..+..... ..++.++++|++|.+.+++. |+  .+|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kv-F~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKL-FSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHH-HhhcCCce
Confidence            46899999999999999999999999999998632    22222222111 46899999999999999985 44  6999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc-------CCCCcc-hhhHHHHHHHH
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWS-IMNLFGVLKYK  225 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~-------~~~~~~-~~~~y~~~k~k  225 (250)
                      |+|.|+....... .+.+..+...|+.|+.++++.++ .+++.+|+.||..+|+.       +..+.. |.++||  ++|
T Consensus        81 V~Hfa~~~~vgeS-~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg--~tK  157 (343)
T KOG1371|consen   81 VMHFAALAAVGES-MENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYG--KTK  157 (343)
T ss_pred             EEeehhhhccchh-hhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcch--hhh
Confidence            9999998775432 33446677999999999999984 57999999999999983       233334 667776  677


Q ss_pred             HHHHHHHHh----cCCCEEEEecceEE
Q 025619          226 KMGEDFVQK----SGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e~~~~~----~gi~~~~vrPg~v~  248 (250)
                      ..+|+....    .+..+..+|-..++
T Consensus       158 ~~iE~i~~d~~~~~~~~~~~LRyfn~~  184 (343)
T KOG1371|consen  158 KAIEEIIHDYNKAYGWKVTGLRYFNVI  184 (343)
T ss_pred             HHHHHHHHhhhccccceEEEEEecccc
Confidence            778876644    35666777755443

>PRK05865 hypothetical protein; Provisional

Probab=99.78  E-value=1.6e-18  Score=166.30  Aligned_cols=129  Identities=21%  Similarity=0.323  Sum_probs=109.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|+||||+|+||++++++|+++|++|++++|+....  .     ..+++++.+|++|.+++.++ +.++|+|||+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-----~~~v~~v~gDL~D~~~l~~a-l~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-----PSSADFIAADIRDATAVESA-MTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-----ccCceEEEeeCCCHHHHHHH-HhCCCEEEECCCcc
Confidence            4799999999999999999999999999999975321  1     23578899999999999865 68899999999754


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEEE
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~~  241 (250)
                      . +         .+++|+.|+.+++++++ .+.++||++||..                    |.++|+++.++|+++++
T Consensus        73 ~-~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------K~aaE~ll~~~gl~~vI  122 (854)
T PRK05865         73 G-R---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------QPRVEQMLADCGLEWVA  122 (854)
T ss_pred             c-c---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------HHHHHHHHHHcCCCEEE
Confidence            2 1         35889999999999985 5788999999853                    56778888889999999


Q ss_pred             EecceEEe
Q 025619          242 ISLCIYCI  249 (250)
Q Consensus       242 vrPg~v~~  249 (250)
                      +||+.|||
T Consensus       123 LRp~~VYG  130 (854)
T PRK05865        123 VRCALIFG  130 (854)
T ss_pred             EEeceEeC
Confidence            99999997

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.78  E-value=9.1e-19  Score=151.84  Aligned_cols=155  Identities=13%  Similarity=0.072  Sum_probs=108.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh---CCCcEEEEcCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICCTG  160 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~~D~vi~~Ag  160 (250)
                      ||||||+|+||++++++|.++|+ +|++++|..... .+.+    .....+..|+.+.+.++.+..   .++|+|||+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN----LADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh----hhheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence            69999999999999999999998 688887654321 1111    011346678888777765322   58999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCCC-------cchhhHHHHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELP-------WSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~~-------~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      .....   ..+....+++|+.|+.++++++++...++|++||.++|+....+       ..+.+.|+  .+|..+|.+++
T Consensus        76 ~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~--~sK~~~e~~~~  150 (314)
T TIGR02197        76 CSDTT---ETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRELERPLNVYG--YSKFLFDQYVR  150 (314)
T ss_pred             ccCcc---ccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccCcCCCCCHHH--HHHHHHHHHHH
Confidence            75422   12334466899999999999885422489999999988732111       12445555  56666776654


Q ss_pred             h------cCCCEEEEecceEEe
Q 025619          234 K------SGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~------~gi~~~~vrPg~v~~  249 (250)
                      +      .+++++++||+.+||
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG  172 (314)
T TIGR02197       151 RRVLPEALSAQVVGLRYFNVYG  172 (314)
T ss_pred             HHhHhhccCCceEEEEEeeccC
Confidence            3      357999999999987

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN00016 RNA-binding protein; Provisional

Probab=99.78  E-value=1.4e-18  Score=155.12  Aligned_cols=152  Identities=21%  Similarity=0.206  Sum_probs=111.2

Q ss_pred             CCCCCEEEEE----cCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC-------cCCCCCeeEEEeeCCCccCcchh
Q 025619           79 ASSSKLVLVA----GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-------KQDEETLQVCKGDTRNPKDLDPA  147 (250)
Q Consensus        79 ~~~~k~vlVT----GasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~v~~Dl~d~~~~~~~  147 (250)
                      ..++|+||||    ||||+||++++++|+++|++|++++|+.+....+..       ++...+++++.+|++|.+.+.+ 
T Consensus        49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~-  127 (378)
T PLN00016         49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVA-  127 (378)
T ss_pred             ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhc-
Confidence            3456789999    999999999999999999999999998764322211       1112358899999988333221 


Q ss_pred             hhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-CCcchhhHHHHHHHH
Q 025619          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-LPWSIMNLFGVLKYK  225 (250)
Q Consensus       148 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-~~~~~~~~y~~~k~k  225 (250)
                       ..++|+|||+++.                 +..++.+++++++ .|+++||++||.++|+... .+..+........+|
T Consensus       128 -~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK  189 (378)
T PLN00016        128 -GAGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGH  189 (378)
T ss_pred             -cCCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchH
Confidence             3579999998652                 2457889999985 6899999999999987432 122111111111157


Q ss_pred             HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..+|.++++.+++++++||+.+||
T Consensus       190 ~~~E~~l~~~~l~~~ilRp~~vyG  213 (378)
T PLN00016        190 LEVEAYLQKLGVNWTSFRPQYIYG  213 (378)
T ss_pred             HHHHHHHHHcCCCeEEEeceeEEC
Confidence            888999999999999999999997

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.78  E-value=6.1e-20  Score=157.95  Aligned_cols=145  Identities=19%  Similarity=0.209  Sum_probs=103.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~Ag~  161 (250)
                      |+||||||+|.||++++++|.++|++|+.+.|.                   ..|++|.+++.+.+- .++|+|||+||.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            489999999999999999999999999999776                   478999988886532 269999999998


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHHh
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      ......+ .+++..+++|+.++.+++++++....++|++||..++...       +.+..|.+.||  ++|.+.|+.+++
T Consensus        62 ~~~~~ce-~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG--~~K~~~E~~v~~  138 (286)
T PF04321_consen   62 TNVDACE-KNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG--RSKLEGEQAVRA  138 (286)
T ss_dssp             --HHHHH-HSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH--HHHHHHHHHHHH
T ss_pred             ecHHhhh-hChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHH--HHHHHHHHHHHH
Confidence            6422111 1334566899999999999997555699999999998643       22334456666  788889999988


Q ss_pred             cCCCEEEEecceEEe
Q 025619          235 SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ~gi~~~~vrPg~v~~  249 (250)
                      ..-+..++|++++||
T Consensus       139 ~~~~~~IlR~~~~~g  153 (286)
T PF04321_consen  139 ACPNALILRTSWVYG  153 (286)
T ss_dssp             H-SSEEEEEE-SEES
T ss_pred             hcCCEEEEecceecc
Confidence            656999999999997

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.78  E-value=4.2e-18  Score=143.56  Aligned_cols=165  Identities=13%  Similarity=0.165  Sum_probs=127.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh---hC--CC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI---FE--GV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~---~~--~~  152 (250)
                      .|+-++|||||.|||++.+++|+++|.+|++++|++++++.+++++.   ...+.++..|.++.+.+-+.+   +.  .+
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            45789999999999999999999999999999999999999877654   345778999999988633322   22  57


Q ss_pred             cEEEEcCcCCCcCCCCC-----CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPSRRW-----DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~-----~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      -++|||+|.....+..+     ......+.+|..++..+.+..     +++.+-||++||.++.    .|.+..+.|+.+
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----~p~p~~s~ysas  203 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----IPTPLLSVYSAS  203 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----ccChhHHHHHHH
Confidence            79999999876222111     122445688999977776654     3567899999999988    466667777766


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.     ...+..+.+..||.+-.+-|..|.+
T Consensus       204 K~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaT  235 (312)
T KOG1014|consen  204 KAFVDFFSRCLQKEYESKGIFVQSVIPYLVAT  235 (312)
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEeehhheec
Confidence            65     5566788889999999999998864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.78  E-value=1e-18  Score=145.42  Aligned_cols=160  Identities=17%  Similarity=0.126  Sum_probs=111.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      ++|||++|+||++++++|+++|++|++++|+. +..+...+.+.  ..+++++.+|++|++++++++      ++++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 33333322211  235788999999999887653      3578999


Q ss_pred             EEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          156 ICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       156 i~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      ||+||.......   +.+..+..+++|+.++.++++++.     .+.+++|++||.++...    .+....|+.+|..  
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g----~~~~~~y~~~k~a~~  156 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG----NAGQANYAASKAGVI  156 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC----CCCCchhHHHHHHHH
Confidence            999997642111   111224456789999999988762     45679999999766532    1223455555431  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         +.+...+...|+++++++||++.
T Consensus       157 ~~~~~l~~~~~~~g~~~~~i~pg~~~  182 (239)
T TIGR01830       157 GFTKSLAKELASRNITVNAVAPGFID  182 (239)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEECCCC
Confidence               12223334579999999999863

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.78  E-value=1.8e-18  Score=144.12  Aligned_cols=157  Identities=15%  Similarity=0.093  Sum_probs=104.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~  158 (250)
                      |+|+||||+||||++++++|+++|  +.|++..|+...  .    ....++.++++|++|.+++++..  ++++|+||||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~----~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~   74 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D----FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC   74 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c----cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            479999999999999999999986  556666665432  1    11356788999999998876532  5789999999


Q ss_pred             CcCCCcCC----CCCC-----CCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          159 TGTTAFPS----RRWD-----GDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       159 Ag~~~~~~----~~~~-----~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      ||......    ....     .....+++|+.++..+++++    + .+.++++++||..+.... .+.+....|+.+  
T Consensus        75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~-~~~~~~~~Y~as--  151 (235)
T PRK09009         75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD-NRLGGWYSYRAS--  151 (235)
T ss_pred             CccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc-CCCCCcchhhhh--
Confidence            99864211    1111     11234578999988887765    2 234689999885542211 122233455544  


Q ss_pred             HHHHHH-------HHHh--cCCCEEEEecceEE
Q 025619          225 KKMGED-------FVQK--SGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~-------~~~~--~gi~~~~vrPg~v~  248 (250)
                      |..++.       ++..  .+++++.|+||++.
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~  184 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTD  184 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEccccee
Confidence            443332       2333  58999999999874

>PLN02996 fatty acyl-CoA reductase

Probab=99.77  E-value=1e-18  Score=160.57  Aligned_cols=163  Identities=23%  Similarity=0.292  Sum_probs=117.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecChhh------Hh-hhhC---------cC-------CCCCeeE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEK------AT-TLFG---------KQ-------DEETLQV  133 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~~~------~~-~~~~---------~~-------~~~~~~~  133 (250)
                      +++|+||||||||+||+++++.|++.+.   +|+++.|..+.      ++ ++..         ..       ...++++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4788999999999999999999998753   58899986531      11 1110         00       0157899


Q ss_pred             EEeeCCCc-------cCcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCc
Q 025619          134 CKGDTRNP-------KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVG  204 (250)
Q Consensus       134 v~~Dl~d~-------~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~  204 (250)
                      +.+|++++       +.+++ +..++|+|||+|+...+.    .+....+++|+.|+.+++++++  .+++++|++||..
T Consensus        89 i~GDl~~~~LGLs~~~~~~~-l~~~vD~ViH~AA~v~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~  163 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREE-MWKEIDIVVNLAATTNFD----ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY  163 (491)
T ss_pred             EecccCCcCCCCChHHHHHH-HHhCCCEEEECccccCCc----CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence            99999854       23443 367899999999976532    2344566899999999999885  3678999999999


Q ss_pred             ccccCC-----CCcc-----------------------------------------------------hhhHHHHHHHHH
Q 025619          205 VTKFNE-----LPWS-----------------------------------------------------IMNLFGVLKYKK  226 (250)
Q Consensus       205 ~~~~~~-----~~~~-----------------------------------------------------~~~~y~~~k~k~  226 (250)
                      +++...     .+++                                                     ..+.  |+.+|.
T Consensus       164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~--Y~~TK~  241 (491)
T PLN02996        164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNT--YVFTKA  241 (491)
T ss_pred             EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCc--hHhhHH
Confidence            986411     1111                                                     0123  446677


Q ss_pred             HHHHHHHh--cCCCEEEEecceEEe
Q 025619          227 MGEDFVQK--SGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~~~--~gi~~~~vrPg~v~~  249 (250)
                      .+|+.+++  .|++++++||+.|+|
T Consensus       242 ~aE~lv~~~~~~lpv~i~RP~~V~G  266 (491)
T PLN02996        242 MGEMLLGNFKENLPLVIIRPTMITS  266 (491)
T ss_pred             HHHHHHHHhcCCCCEEEECCCEecc
Confidence            78877765  489999999999986

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.77  E-value=3.6e-18  Score=152.71  Aligned_cols=159  Identities=18%  Similarity=0.184  Sum_probs=109.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+++++++..... ..++..+.+|++|++++.+. ++++|++|||
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~~-l~~IDiLInn  252 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVGQEAALAEL-LEKVDILIIN  252 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCCeEEEEeeCCCHHHHHHH-hCCCCEEEEC
Confidence            467899999999999999999999999999999999987664432211 22467789999999998864 7899999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHc----c-CC----CCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----P-SS----LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~----~-~~----~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e  229 (250)
                      ||.......+.++.++.+++|+.|+.++++++    + .+    .+.+|++|+ +...    + .....|+  .+|.+++
T Consensus       253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~----~-~~~~~Y~--ASKaAl~  324 (406)
T PRK07424        253 HGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN----P-AFSPLYE--LSKRALG  324 (406)
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc----C-CCchHHH--HHHHHHH
Confidence            99764332222233456789999999999876    1 22    124566654 3221    1 1123455  4555444


Q ss_pred             HH--HH--hcCCCEEEEecceE
Q 025619          230 DF--VQ--KSGLPFTIISLCIY  247 (250)
Q Consensus       230 ~~--~~--~~gi~~~~vrPg~v  247 (250)
                      .+  ++  +.++.+..+.||.+
T Consensus       325 ~l~~l~~~~~~~~I~~i~~gp~  346 (406)
T PRK07424        325 DLVTLRRLDAPCVVRKLILGPF  346 (406)
T ss_pred             HHHHHHHhCCCCceEEEEeCCC
Confidence            32  22  34677777777765

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=2.2e-18  Score=145.41  Aligned_cols=143  Identities=22%  Similarity=0.187  Sum_probs=118.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcCcCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGTT  162 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~Ag~~  162 (250)
                      +|||||++|.+|.+|++.|. .+++|+.++|..                   +|++|++.+.+.+-+ ++|+|||+|++.
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt   61 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRETRPDVVINAAAYT   61 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence            39999999999999999998 778999988753                   799999999875422 699999999998


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC-------CCcchhhHHHHHHHHHHHHHHHHhc
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDFVQKS  235 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~k~~~e~~~~~~  235 (250)
                      .+...+. +++..+.+|..|+.+++++++.-..++|++||..++....       .+..|.+.||  ++|...|..++..
T Consensus        62 ~vD~aE~-~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG--~sKl~GE~~v~~~  138 (281)
T COG1091          62 AVDKAES-EPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG--RSKLAGEEAVRAA  138 (281)
T ss_pred             ccccccC-CHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhh--HHHHHHHHHHHHh
Confidence            7544332 3455678999999999999976557899999999986433       2345666766  7899999999999


Q ss_pred             CCCEEEEecceEEe
Q 025619          236 GLPFTIISLCIYCI  249 (250)
Q Consensus       236 gi~~~~vrPg~v~~  249 (250)
                      +-+..++|.+|+|+
T Consensus       139 ~~~~~I~Rtswv~g  152 (281)
T COG1091         139 GPRHLILRTSWVYG  152 (281)
T ss_pred             CCCEEEEEeeeeec
Confidence            99999999999997

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.76  E-value=5.7e-18  Score=146.40  Aligned_cols=163  Identities=21%  Similarity=0.269  Sum_probs=115.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChh------hHhhhhC------cCCCCCeeEEEeeCCCcc-Ccch--
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE------KATTLFG------KQDEETLQVCKGDTRNPK-DLDP--  146 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~------~~~~~~~------~~~~~~~~~v~~Dl~d~~-~~~~--  146 (250)
                      +++|+||||||+|..++++|+.+ ..+|+++.|..+      +++....      +....+++++.+|+..++ .+.+  
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999999977 469999999654      2222222      122568999999998654 2322  


Q ss_pred             --hhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCC-CCeEEEEccCcccccCCC-----Ccc----
Q 025619          147 --AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKFNEL-----PWS----  214 (250)
Q Consensus       147 --~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~iV~iSS~~~~~~~~~-----~~~----  214 (250)
                        .+.+.+|.|||||+..+.    ..+..+....|+.||..+++.+..| .|.+.|+||+++......     ...    
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~----v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~  156 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH----VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP  156 (382)
T ss_pred             HHHHhhhcceEEecchhhcc----cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc
Confidence              124579999999997652    1234556689999999999977654 566999999998863110     000    


Q ss_pred             ---h--hhHHHHHHHHHHHHHHHHh---cCCCEEEEecceEEe
Q 025619          215 ---I--MNLFGVLKYKKMGEDFVQK---SGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ---~--~~~y~~~k~k~~~e~~~~~---~gi~~~~vrPg~v~~  249 (250)
                         .  ...-||..+|..+|..+++   .|++++++|||+|.+
T Consensus       157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~g  199 (382)
T COG3320         157 TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITG  199 (382)
T ss_pred             cccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeec
Confidence               0  0112456778888876653   599999999999865

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.75  E-value=1.4e-17  Score=131.54  Aligned_cols=160  Identities=21%  Similarity=0.145  Sum_probs=112.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhh---CcC--CCCCeeEEEeeCCCccCcchhh------hC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF---GKQ--DEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~---~~~--~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      |+++||||+|+||.+++++|+++|+ .|++++|+++..+...   +.+  ...++.++.+|+++++++++.+      ++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 6888888764432211   111  1346778899999988877643      35


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      ++|+|||+||......   .+.+..+..+++|+.++.+++++++ .+.+++|++||..+..+    ......|+.+  |.
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~----~~~~~~y~~s--k~  154 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLG----NPGQANYAAA--NA  154 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcC----CCCchhhHHH--HH
Confidence            6899999999754211   1112234456899999999999884 46689999999876532    2223445544  44


Q ss_pred             HHH---HHHHhcCCCEEEEecceEE
Q 025619          227 MGE---DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e---~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..+   +.++..|++++.+.||.+-
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHhcCCceEEEeecccc
Confidence            444   4456689999999999864

It uses NADPH to reduce the keto group to a hydroxy group.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.75  E-value=1.2e-18  Score=137.61  Aligned_cols=144  Identities=22%  Similarity=0.220  Sum_probs=106.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC--hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~--~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      |+++||||++|||++++++|+++|. +|++++|+  .+..+++.+++.  ..++.++++|++|.+++++.+      ++.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999965 78888998  555555533322  467889999999999988754      468


Q ss_pred             CcEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          152 VTHVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      +|+||||||.........   +...+.+++|+.+...+.+++. ++.++||++||..+..    +.+....|+  .+|.+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~--askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR----GSPGMSAYS--ASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS----SSTTBHHHH--HHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc----CCCCChhHH--HHHHH
Confidence            999999999876222111   1223456889999999998774 4678999999999883    334444555  55555


Q ss_pred             HHHHH
Q 025619          228 GEDFV  232 (250)
Q Consensus       228 ~e~~~  232 (250)
                      ++.+.
T Consensus       155 l~~~~  159 (167)
T PF00106_consen  155 LRGLT  159 (167)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55444

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.74  E-value=8.5e-19  Score=135.69  Aligned_cols=161  Identities=17%  Similarity=0.207  Sum_probs=123.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      .++-+.+||||.+|+|++.++.|+++|+.|++++-..++-++..+++ +.++.+.+.|++++++++.++      |+++|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-g~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            46678999999999999999999999999999998887777766665 567889999999999998765      78999


Q ss_pred             EEEEcCcCCCc------C---CCCCCCCCCcceehHHHHHHHHHHc-------c--C-C-CCeEEEEccCcccccCCCCc
Q 025619          154 HVICCTGTTAF------P---SRRWDGDNTPEKVDWEGVRNLVSAL-------P--S-S-LKRIVLVSSVGVTKFNELPW  213 (250)
Q Consensus       154 ~vi~~Ag~~~~------~---~~~~~~~~~~~~~N~~g~~~l~~a~-------~--~-~-~~~iV~iSS~~~~~~~~~~~  213 (250)
                      .++||||+...      .   ..+.++..+.+++|+.||+++++.-       +  + | .+.||+..|.+++....   
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~---  162 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT---  162 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc---
Confidence            99999998542      1   1233445667799999999998743       1  1 1 34688999988885332   


Q ss_pred             chhhHHHHHHHHH-------HHHHHHHhcCCCEEEEecceE
Q 025619          214 SIMNLFGVLKYKK-------MGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       214 ~~~~~y~~~k~k~-------~~e~~~~~~gi~~~~vrPg~v  247 (250)
                       ...+|.  .+|.       -+.+.+...|||++.|.||.+
T Consensus       163 -gqaays--askgaivgmtlpiardla~~gir~~tiapglf  200 (260)
T KOG1199|consen  163 -GQAAYS--ASKGAIVGMTLPIARDLAGDGIRFNTIAPGLF  200 (260)
T ss_pred             -chhhhh--cccCceEeeechhhhhcccCceEEEeeccccc
Confidence             233443  4443       345666778999999999976

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.73  E-value=1.3e-18  Score=145.81  Aligned_cols=153  Identities=14%  Similarity=0.153  Sum_probs=111.2

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEecChhhH----hhhhCcCCCCCeeEEEeeCCCccCcchhh------h-CCCcEE
Q 025619           89 GGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVTHV  155 (250)
Q Consensus        89 Gas--G~IG~~la~~L~~~G~~V~~~~R~~~~~----~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~-~~~D~v  155 (250)
                      |++  +|||++++++|+++|++|++++|+.+++    +++.++.   +..++++|++|++++++++      + +++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY---GAEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT---TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc---CCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            667  9999999999999999999999999874    3333332   3447999999999988754      6 899999


Q ss_pred             EEcCcCCCcC--CCC-----CCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          156 ICCTGTTAFP--SRR-----WDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       156 i~~Ag~~~~~--~~~-----~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      |||+|.....  ..+     ++.....+++|+.++..+++++.   +..++||++||.....    +.+....|+.+|. 
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~----~~~~~~~y~~sKaa  153 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR----PMPGYSAYSASKAA  153 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS----BSTTTHHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc----cCccchhhHHHHHH
Confidence            9999986531  111     11123344779999888888762   2237899999987763    3344456665553 


Q ss_pred             ----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                          .+.+..++.. +|||+++|.||++.
T Consensus       154 l~~l~r~lA~el~~~~gIrVN~V~pG~i~  182 (241)
T PF13561_consen  154 LEGLTRSLAKELAPKKGIRVNAVSPGPIE  182 (241)
T ss_dssp             HHHHHHHHHHHHGGHGTEEEEEEEESSBS
T ss_pred             HHHHHHHHHHHhccccCeeeeeeccccee
Confidence                3334456667 89999999999874

...

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.71  E-value=5.2e-17  Score=151.30  Aligned_cols=125  Identities=22%  Similarity=0.279  Sum_probs=92.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecChhh------Hh-hhhC---------cC-------CCCCeeE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEK------AT-TLFG---------KQ-------DEETLQV  133 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~~~------~~-~~~~---------~~-------~~~~~~~  133 (250)
                      +++|+||||||||+||++++++|++.+.   +|+++.|..+.      ++ ++.+         ..       ...++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998764   68999986432      11 1110         00       0246889


Q ss_pred             EEeeCCCcc-----CcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCccc
Q 025619          134 CKGDTRNPK-----DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVT  206 (250)
Q Consensus       134 v~~Dl~d~~-----~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~  206 (250)
                      +.+|+++++     +..+.+..++|+|||+|+...+.    .+.+...++|+.|+.++++.++  ...+++|++||..++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~----~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy  272 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD----ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN  272 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc----cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence            999999973     22223356799999999986532    2344566899999999999884  346789999999888


Q ss_pred             cc
Q 025619          207 KF  208 (250)
Q Consensus       207 ~~  208 (250)
                      +.
T Consensus       273 G~  274 (605)
T PLN02503        273 GQ  274 (605)
T ss_pred             cC
Confidence            73

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.71  E-value=8.5e-17  Score=138.05  Aligned_cols=131  Identities=15%  Similarity=0.190  Sum_probs=99.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCC-CcEEEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEG-VTHVIC  157 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~-~D~vi~  157 (250)
                      +|+||||||+||++++++|+++|++|++++|++++..       ..+++.+.+|++|++++.+++     +.+ +|.|+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence            4899999999999999999999999999999987542       235677889999999998763     156 999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhc-
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS-  235 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~-  235 (250)
                      +++...       .       ......++++++ +.|++|||++||.......  +           .+...++++++. 
T Consensus        74 ~~~~~~-------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--~-----------~~~~~~~~l~~~~  126 (285)
T TIGR03649        74 VAPPIP-------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG--P-----------AMGQVHAHLDSLG  126 (285)
T ss_pred             eCCCCC-------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC--c-----------hHHHHHHHHHhcc
Confidence            976321       0       123456788887 4789999999987654210  0           122345677775 


Q ss_pred             CCCEEEEecceEE
Q 025619          236 GLPFTIISLCIYC  248 (250)
Q Consensus       236 gi~~~~vrPg~v~  248 (250)
                      |++++++||+++|
T Consensus       127 gi~~tilRp~~f~  139 (285)
T TIGR03649       127 GVEYTVLRPTWFM  139 (285)
T ss_pred             CCCEEEEeccHHh
Confidence            9999999999876

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.71  E-value=5.9e-17  Score=136.60  Aligned_cols=161  Identities=19%  Similarity=0.181  Sum_probs=121.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++|+||||+.|||.+++.++..+|++|.++.|+.+++.++.+.++    ...+.+..+|+.|-+++...+      .+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            689999999999999999999999999999999999988876654    234668889999887776543      3578


Q ss_pred             cEEEEcCcCCCcCCCCCCC---CCCcceehHHHHHHHHHHc----c--CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDG---DNTPEKVDWEGVRNLVSAL----P--SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~---~~~~~~~N~~g~~~l~~a~----~--~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |.+|||||......-...+   .+..+++|+.|+.+++.+.    +  .+.++|+.+||..+.    .+....+.|..+|
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~----~~i~GysaYs~sK  189 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM----LGIYGYSAYSPSK  189 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh----cCcccccccccHH
Confidence            9999999987533222222   2445689999999998865    2  235699999998887    3444445554444


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      .     ..++.+++..+||+++...|+.+
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~  218 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDT  218 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCC
Confidence            3     33455777778999999988754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.71  E-value=9.9e-17  Score=137.48  Aligned_cols=152  Identities=20%  Similarity=0.245  Sum_probs=98.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCCCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF  164 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~~~  164 (250)
                      ||||||+|+||++++++|+++|++|++++|++++.+...    ...    ..|+.+ ..+.++ +.++|+|||+||....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~----~~~~~~-~~~~~~-~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----WEG----YKPWAP-LAESEA-LEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----cee----eecccc-cchhhh-cCCCCEEEECCCCCcc
Confidence            699999999999999999999999999999886543221    001    123322 333333 5789999999997542


Q ss_pred             CCCCCC--CCCCcceehHHHHHHHHHHcc-CCC--CeEEEEccCcccccCC-CCc------chhhHHHHHHHHHHHHHH-
Q 025619          165 PSRRWD--GDNTPEKVDWEGVRNLVSALP-SSL--KRIVLVSSVGVTKFNE-LPW------SIMNLFGVLKYKKMGEDF-  231 (250)
Q Consensus       165 ~~~~~~--~~~~~~~~N~~g~~~l~~a~~-~~~--~~iV~iSS~~~~~~~~-~~~------~~~~~y~~~k~k~~~e~~-  231 (250)
                      . ..|.  .....+++|+.++.+++++++ .+.  .++|+.|+...|+... .++      .+.+.|+  +.+...|.. 
T Consensus        71 ~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~--~~~~~~e~~~  147 (292)
T TIGR01777        71 D-KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLA--ELCRDWEEAA  147 (292)
T ss_pred             c-ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHH--HHHHHHHHHh
Confidence            1 1222  123455789999999999984 454  3566666666665321 111      1122222  333333433 


Q ss_pred             --HHhcCCCEEEEecceEEe
Q 025619          232 --VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 --~~~~gi~~~~vrPg~v~~  249 (250)
                        .++.+++++++||+.+||
T Consensus       148 ~~~~~~~~~~~ilR~~~v~G  167 (292)
T TIGR01777       148 QAAEDLGTRVVLLRTGIVLG  167 (292)
T ss_pred             hhchhcCCceEEEeeeeEEC
Confidence              345689999999999997

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.70  E-value=9.2e-17  Score=139.00  Aligned_cols=141  Identities=18%  Similarity=0.220  Sum_probs=92.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~A  159 (250)
                      +.|+||||||+|+||++++++|+++|++|+...+                      |++|.+.+...+ ..++|+|||+|
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~----------------------~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG----------------------RLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC----------------------ccCCHHHHHHHHHhcCCCEEEECC
Confidence            3468999999999999999999999999875322                      223333333321 12689999999


Q ss_pred             cCCCcCCCCC--CCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------------C-CCcchhhHHHHH
Q 025619          160 GTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------------E-LPWSIMNLFGVL  222 (250)
Q Consensus       160 g~~~~~~~~~--~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------------~-~~~~~~~~y~~~  222 (250)
                      |....+..+|  .++...+++|+.|+.+++++++ .+++ ++++||..+++..             + .+..+.+.|+  
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg--  142 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYS--  142 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchH--
Confidence            9875332222  3445567899999999999985 4665 4556665555311             1 1111224555  


Q ss_pred             HHHHHHHHHHHhcCCCEEEEecceE
Q 025619          223 KYKKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       223 k~k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      .+|.++|.+++.+. +...+|+++.
T Consensus       143 ~sK~~~E~~~~~y~-~~~~lr~~~~  166 (298)
T PLN02778        143 KTKAMVEELLKNYE-NVCTLRVRMP  166 (298)
T ss_pred             HHHHHHHHHHHHhh-ccEEeeeccc
Confidence            77888888776542 4455665543

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.69  E-value=2.2e-15  Score=132.96  Aligned_cols=166  Identities=41%  Similarity=0.525  Sum_probs=122.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC-cCCCCCeeEEEeeCCCccCcchhhhC----CCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-KQDEETLQVCKGDTRNPKDLDPAIFE----GVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~v~~Dl~d~~~~~~~~~~----~~D  153 (250)
                      +.+.+.|||+||+|++|+.+++.|+++|+.|.++.|+.++.+.+.. .........+..|.....++...+.+    ...
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            4566899999999999999999999999999999999988777654 22234556666666655554433223    234


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      +++-++|-.  +..+  +....+++.+.|++++++|++ .|++|+|++|++++......++.......+.++|+.+|+++
T Consensus       156 ~v~~~~ggr--p~~e--d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~  231 (411)
T KOG1203|consen  156 IVIKGAGGR--PEEE--DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFL  231 (411)
T ss_pred             eEEecccCC--CCcc--cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHH
Confidence            666666543  3221  223344899999999999995 79999999999888765443333222335667899999999


Q ss_pred             HhcCCCEEEEecceEE
Q 025619          233 QKSGLPFTIISLCIYC  248 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~  248 (250)
                      +++|+++++||||...
T Consensus       232 ~~Sgl~ytiIR~g~~~  247 (411)
T KOG1203|consen  232 QDSGLPYTIIRPGGLE  247 (411)
T ss_pred             HhcCCCcEEEeccccc
Confidence            9999999999999764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.68  E-value=3.8e-16  Score=130.24  Aligned_cols=143  Identities=29%  Similarity=0.392  Sum_probs=105.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|+||||.+|+.+++.|++.|++|+++.|++.+  .+.+.    ..+++++.+|+.|.+++.++ ++++|+||++.+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~~a-l~g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLVAA-LKGVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHHHH-HTTCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHHHH-HcCCceEEeecCcc
Confidence            7999999999999999999999999999999743  33332    34678899999999999976 89999999987654


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEEE
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~~  241 (250)
                      .             ........+++++++ .|+++||+.|....+.......+..   .....|...|+++++.|+++++
T Consensus        76 ~-------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~---~~~~~k~~ie~~l~~~~i~~t~  139 (233)
T PF05368_consen   76 H-------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEI---PHFDQKAEIEEYLRESGIPYTI  139 (233)
T ss_dssp             C-------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHH---HHHHHHHHHHHHHHHCTSEBEE
T ss_pred             h-------------hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccc---hhhhhhhhhhhhhhhcccccee
Confidence            2             234566788999884 6899998644444442221122111   2234678899999999999999


Q ss_pred             EecceEE
Q 025619          242 ISLCIYC  248 (250)
Q Consensus       242 vrPg~v~  248 (250)
                      ||||++|
T Consensus       140 i~~g~f~  146 (233)
T PF05368_consen  140 IRPGFFM  146 (233)
T ss_dssp             EEE-EEH
T ss_pred             ccccchh
Confidence            9999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.68  E-value=4.6e-16  Score=129.28  Aligned_cols=161  Identities=16%  Similarity=0.173  Sum_probs=120.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ..+++|+||||+||||++|++.|..+|+.|++++.--... +.+......++++.+.-|+..+      ++..+|.|+|+
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~~evD~IyhL   98 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LLKEVDQIYHL   98 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH------HHHHhhhhhhh
Confidence            4568999999999999999999999999999998643322 2222233366788888888765      46789999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC------------CCcchhhHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKK  226 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k~k~  226 (250)
                      |+... |..-...+...+.+|+.|+.+++-.++.-.+|+++.||..+|+++.            .|..+.+.|.  ..|+
T Consensus        99 Aapas-p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyd--egKr  175 (350)
T KOG1429|consen   99 AAPAS-PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYD--EGKR  175 (350)
T ss_pred             ccCCC-CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhh--HHHH
Confidence            99886 3333345566779999999999998876558999999999998421            1122334444  5577


Q ss_pred             HHHHH----HHhcCCCEEEEecceEEe
Q 025619          227 MGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|..    -++.||.+.+.|+-..||
T Consensus       176 ~aE~L~~~y~k~~giE~rIaRifNtyG  202 (350)
T KOG1429|consen  176 VAETLCYAYHKQEGIEVRIARIFNTYG  202 (350)
T ss_pred             HHHHHHHHhhcccCcEEEEEeeecccC
Confidence            67644    467899999999988776

>PRK12320 hypothetical protein; Provisional

Probab=99.68  E-value=5.6e-16  Score=146.11  Aligned_cols=133  Identities=20%  Similarity=0.266  Sum_probs=102.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||+|+||++++++|+++|++|++++|.+....       ..+++++.+|++|.. +.++ +.++|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-------~~~ve~v~~Dl~d~~-l~~a-l~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-------DPRVDYVCASLRNPV-LQEL-AGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-------cCCceEEEccCCCHH-HHHH-hcCCCEEEEcCccC
Confidence            37999999999999999999999999999998754321       346789999999984 5543 67899999999864


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEEE
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTI  241 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~~  241 (250)
                      ..         ...++|+.|+.+++++++ .+. ++|++||..+.  . .      .|.      ..|.++...++++++
T Consensus        72 ~~---------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~--~-~------~~~------~aE~ll~~~~~p~~I  126 (699)
T PRK12320         72 TS---------APGGVGITGLAHVANAAARAGA-RLLFVSQAAGR--P-E------LYR------QAETLVSTGWAPSLV  126 (699)
T ss_pred             cc---------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCCC--C-c------ccc------HHHHHHHhcCCCEEE
Confidence            21         112589999999999985 454 79999986421  1 0      111      356667777899999


Q ss_pred             EecceEEe
Q 025619          242 ISLCIYCI  249 (250)
Q Consensus       242 vrPg~v~~  249 (250)
                      +|++.+||
T Consensus       127 LR~~nVYG  134 (699)
T PRK12320        127 IRIAPPVG  134 (699)
T ss_pred             EeCceecC
Confidence            99999997

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.64  E-value=9.2e-16  Score=160.73  Aligned_cols=162  Identities=15%  Similarity=0.127  Sum_probs=113.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChh--------------hH--------------------------
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE--------------KA--------------------------  119 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~--------------~~--------------------------  119 (250)
                      +++++|||||++|||.+++++|+++ |++|++++|++.              .+                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 699999999820              00                          


Q ss_pred             -------hhhhCcC--CCCCeeEEEeeCCCccCcchhh-----hCCCcEEEEcCcCCCcC---CCCCCCCCCcceehHHH
Q 025619          120 -------TTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEG  182 (250)
Q Consensus       120 -------~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~vi~~Ag~~~~~---~~~~~~~~~~~~~N~~g  182 (250)
                             +...+.+  .+..+.++.+|++|.+++++++     .+++|+||||||.....   ..+.++..+.+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                   0000001  1346788999999999988654     23699999999986421   12223344567999999


Q ss_pred             HHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHH---HH--hcCCCEEEEecceEE
Q 025619          183 VRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF---VQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       183 ~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~---~~--~~gi~~~~vrPg~v~  248 (250)
                      +.++++++. ...++||++||..++..    ......|+.+|  ..+..+   ++  ..++++++|.||.+-
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G----~~gqs~YaaAk--aaL~~la~~la~~~~~irV~sI~wG~wd 2221 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYG----NTGQSDYAMSN--DILNKAALQLKALNPSAKVMSFNWGPWD 2221 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCC----CCCcHHHHHHH--HHHHHHHHHHHHHcCCcEEEEEECCeec
Confidence            999999884 45578999999988632    22334566544  333222   21  236899999999763

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK06720 hypothetical protein; Provisional

Probab=99.64  E-value=1.9e-15  Score=120.15  Aligned_cols=128  Identities=17%  Similarity=0.161  Sum_probs=89.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++.  .....++.+|++|.+++++.+      ++
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998776654433221  335667899999998887643      57


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCC-CCcceehHHHHHHHHHHc-----c-------CCCCeEEEEccCccc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSAL-----P-------SSLKRIVLVSSVGVT  206 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~-~~~~~~N~~g~~~l~~a~-----~-------~~~~~iV~iSS~~~~  206 (250)
                      ++|++|||||........|+.. +....+|+.++......+     +       ...+|+..+||.+..
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            8999999999865333333311 112244555543333322     1       245789999987664

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.62  E-value=7.6e-16  Score=127.93  Aligned_cols=164  Identities=20%  Similarity=0.194  Sum_probs=122.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~  157 (250)
                      |+++||||+|+||++.+..++..  .++.+.++.-.  ..+..+.+....++..++.+|+.|...+...+ ...+|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            78999999999999999999886  45555443311  11232222223678899999999988776543 247999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCcccccC--------CCCcchhhHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~  227 (250)
                      .|+..+.. ..+.+.....+.|+.++..|++++.  .+++++|++||..+||+.        .....|.++|+  ++|++
T Consensus        87 faa~t~vd-~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyA--asKaA  163 (331)
T KOG0747|consen   87 FAAQTHVD-RSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYA--ASKAA  163 (331)
T ss_pred             hHhhhhhh-hhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchH--HHHHH
Confidence            99987743 2333445566889999999999985  368899999999999843        23445667776  67777


Q ss_pred             HHHHHH----hcCCCEEEEecceEEe
Q 025619          228 GEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +|..++    ++|++++++|.+.|||
T Consensus       164 aE~~v~Sy~~sy~lpvv~~R~nnVYG  189 (331)
T KOG0747|consen  164 AEMLVRSYGRSYGLPVVTTRMNNVYG  189 (331)
T ss_pred             HHHHHHHHhhccCCcEEEEeccCccC
Confidence            776664    5799999999999997

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.59  E-value=3.2e-15  Score=125.39  Aligned_cols=138  Identities=15%  Similarity=0.137  Sum_probs=99.0

Q ss_pred             HHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCCcEEEEcCcCCCcCCCCCCCCCC
Q 025619           98 VVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCTGTTAFPSRRWDGDNT  174 (250)
Q Consensus        98 la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~vi~~Ag~~~~~~~~~~~~~~  174 (250)
                      ++++|+++|++|++++|+.++.+         ..+++++|++|.+++++++   .+++|+||||||....     .+.+.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~---------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-----~~~~~   66 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT---------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-----APVEL   66 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh---------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-----CCHHH
Confidence            47899999999999999876542         1246789999999988654   2479999999997531     23455


Q ss_pred             cceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCC-----------------------CCcchhhHHHHHHHH---
Q 025619          175 PEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNE-----------------------LPWSIMNLFGVLKYK---  225 (250)
Q Consensus       175 ~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~-----------------------~~~~~~~~y~~~k~k---  225 (250)
                      .+++|+.++..+++++.   ...++||++||..++....                       .+......|+.+|..   
T Consensus        67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            67999999999998762   1347999999998874211                       133344567665542   


Q ss_pred             --HHHH-HHHHhcCCCEEEEecceEEe
Q 025619          226 --KMGE-DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 --~~~e-~~~~~~gi~~~~vrPg~v~~  249 (250)
                        +.+. .+++..||++++|+||++.+
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T  173 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFT  173 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccC
Confidence              1222 44566799999999998853

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.58  E-value=5.4e-14  Score=119.39  Aligned_cols=145  Identities=30%  Similarity=0.394  Sum_probs=116.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      ++||||||||++|++++++|+++|++|++..|++++.....     .++++..+|+.+++++..+ +.+.|.+++..+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~a-~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVAG-AKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHHH-hccccEEEEEeccc
Confidence            47999999999999999999999999999999999877654     5788999999999999975 79999999988765


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII  242 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~~v  242 (250)
                      . +.     . ...........+..+++..+..+++.+|...+.....        ..+.+.|...|+.+...|+.++++
T Consensus        75 ~-~~-----~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~--------~~~~~~~~~~e~~l~~sg~~~t~l  139 (275)
T COG0702          75 D-GS-----D-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASP--------SALARAKAAVEAALRSSGIPYTTL  139 (275)
T ss_pred             c-cc-----c-chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCc--------cHHHHHHHHHHHHHHhcCCCeEEE
Confidence            3 21     1 2224455666666666666778999999887764221        136688999999999999999999


Q ss_pred             ecceEE
Q 025619          243 SLCIYC  248 (250)
Q Consensus       243 rPg~v~  248 (250)
                      ||..+|
T Consensus       140 r~~~~~  145 (275)
T COG0702         140 RRAAFY  145 (275)
T ss_pred             ecCeee
Confidence            966654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.58  E-value=4.3e-15  Score=152.02  Aligned_cols=163  Identities=18%  Similarity=0.140  Sum_probs=112.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC----CeEEEEecChhhHhh---hhCc---------CCCCCeeEEEeeCCCcc---
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATT---LFGK---------QDEETLQVCKGDTRNPK---  142 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G----~~V~~~~R~~~~~~~---~~~~---------~~~~~~~~v~~Dl~d~~---  142 (250)
                      .++|+||||+|+||.+++++|+++|    ++|+++.|+....+.   +.+.         ....+++++.+|++++.   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5799999999999999999999987    789999997543221   1110         00236889999998653   


Q ss_pred             ---CcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC---------
Q 025619          143 ---DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN---------  209 (250)
Q Consensus       143 ---~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~---------  209 (250)
                         ...+ +..++|+|||||+.....    .+.......|+.|+.++++++. .+.++++++||.++++..         
T Consensus      1051 ~~~~~~~-l~~~~d~iiH~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443      1051 SDEKWSD-LTNEVDVIIHNGALVHWV----YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred             CHHHHHH-HHhcCCEEEECCcEecCc----cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence               2222 246899999999976421    1222233579999999999884 567899999999887421         


Q ss_pred             ----------CCCcch---hhHHHHHHHHHHHHHHHH---hcCCCEEEEecceEEe
Q 025619          210 ----------ELPWSI---MNLFGVLKYKKMGEDFVQ---KSGLPFTIISLCIYCI  249 (250)
Q Consensus       210 ----------~~~~~~---~~~y~~~k~k~~~e~~~~---~~gi~~~~vrPg~v~~  249 (250)
                                ..+...   ....+|..+|..+|..+.   +.|++++++|||.|+|
T Consensus      1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G 1181 (1389)
T TIGR03443      1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTG 1181 (1389)
T ss_pred             hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCcccc
Confidence                      000000   011135567777776653   3589999999999987

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.58  E-value=8.9e-15  Score=139.67  Aligned_cols=142  Identities=18%  Similarity=0.224  Sum_probs=98.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~A  159 (250)
                      +.|+||||||+|+||+++++.|.++|++|..                      ..+|++|.+.+.+.+- .++|+|||+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence            4568999999999999999999999998731                      1135677777765432 2799999999


Q ss_pred             cCCCcCCCCC--CCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCc-------chhhHHHHH
Q 025619          160 GTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPW-------SIMNLFGVL  222 (250)
Q Consensus       160 g~~~~~~~~~--~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~-------~~~~~y~~~  222 (250)
                      +....+..++  .++...+++|+.|+.+++++++ .++ ++|++||..+++..       ..|+       ++.+.|+  
T Consensus       437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg--  513 (668)
T PLN02260        437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYS--  513 (668)
T ss_pred             cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhh--
Confidence            9875332222  2445567899999999999995 466 46777777765410       1122       1224555  


Q ss_pred             HHHHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KYKKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.+.|++++.. -++.++|+.++|
T Consensus       514 ~sK~~~E~~~~~~-~~~~~~r~~~~~  538 (668)
T PLN02260        514 KTKAMVEELLREY-DNVCTLRVRMPI  538 (668)
T ss_pred             HHHHHHHHHHHhh-hhheEEEEEEec
Confidence            7788888888765 356666766665

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.56  E-value=1.9e-14  Score=119.60  Aligned_cols=153  Identities=20%  Similarity=0.266  Sum_probs=103.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCCCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF  164 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~~~  164 (250)
                      |+||||||+||++|+.+|.+.|++|+++.|++.+.+...    +..+       ...+.+.+..-.++|+|||+||... 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~----~~~v-------~~~~~~~~~~~~~~DavINLAG~~I-   68 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL----HPNV-------TLWEGLADALTLGIDAVINLAGEPI-   68 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc----Cccc-------cccchhhhcccCCCCEEEECCCCcc-
Confidence            689999999999999999999999999999987765422    1111       1223333321127999999999875 


Q ss_pred             CCCCCCCC--CCcceehHHHHHHHHHHc---cCCCCeEEEEccCcccccCC-CCcchhhHHH---HHHHHHHHHHHH---
Q 025619          165 PSRRWDGD--NTPEKVDWEGVRNLVSAL---PSSLKRIVLVSSVGVTKFNE-LPWSIMNLFG---VLKYKKMGEDFV---  232 (250)
Q Consensus       165 ~~~~~~~~--~~~~~~N~~g~~~l~~a~---~~~~~~iV~iSS~~~~~~~~-~~~~~~~~y~---~~k~k~~~e~~~---  232 (250)
                      ....|...  +...+.-+..|..+.++.   +...+.+|.-|..+.|+... ..+.+.++++   .++.....|++.   
T Consensus        69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a  148 (297)
T COG1090          69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA  148 (297)
T ss_pred             ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence            33446553  345566778899998876   34666777777777777422 2222222222   234455555544   


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      ++.|.|++.+|-|.|++
T Consensus       149 ~~~gtRvvllRtGvVLs  165 (297)
T COG1090         149 QQLGTRVVLLRTGVVLS  165 (297)
T ss_pred             hhcCceEEEEEEEEEec
Confidence            45699999999999975

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.55  E-value=3.5e-14  Score=118.23  Aligned_cols=157  Identities=17%  Similarity=0.201  Sum_probs=118.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh----hhC--cCCCCCeeEEEeeCCCccCcchhh-hCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFG--KQDEETLQVCKGDTRNPKDLDPAI-FEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~----~~~--~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D  153 (250)
                      ++|++||||-||.-|+.|++.|++.||.|..+.|+.+....    +.+  .....+++.+.+|++|...+.+++ .-++|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            46899999999999999999999999999999987543211    111  112445889999999999888764 23799


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C--CCeEEEEccCcccc-------cCCCCcchhhHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTK-------FNELPWSIMNLFGVLK  223 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~--~~~iV~iSS~~~~~-------~~~~~~~~~~~y~~~k  223 (250)
                      -|+|+|+..+++ ..|+.++...+++-.|+.+++++++. +  ..||...||.--++       .++.|+.|.++|+.+|
T Consensus        81 EIYNLaAQS~V~-vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAK  159 (345)
T COG1089          81 EIYNLAAQSHVG-VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK  159 (345)
T ss_pred             hheecccccccc-ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHH
Confidence            999999988744 56777777889999999999999952 2  35888888887776       3567899999999877


Q ss_pred             HHHHH--HHHHHhcCCC
Q 025619          224 YKKMG--EDFVQKSGLP  238 (250)
Q Consensus       224 ~k~~~--e~~~~~~gi~  238 (250)
                      .-...  ..+-+.+|+-
T Consensus       160 lYa~W~tvNYResYgl~  176 (345)
T COG1089         160 LYAYWITVNYRESYGLF  176 (345)
T ss_pred             HHHHheeeehHhhcCce
Confidence            64322  2344445543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.54  E-value=3.1e-14  Score=114.50  Aligned_cols=159  Identities=21%  Similarity=0.219  Sum_probs=97.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh-h--HhhhhCcC--CCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-K--ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~-~--~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|||||.|+||..+++.|+++|. +|++++|+.. +  .+...+++  .+..+.++.+|++|++++++++      +++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999986 7999999932 1  11111111  1457889999999999988754      357


Q ss_pred             CcEEEEcCcCCCcCCCCCCC---CCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-HH
Q 025619          152 VTHVICCTGTTAFPSRRWDG---DNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-KK  226 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~---~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-k~  226 (250)
                      +|.|||+||..........+   ....+..-+.|+.++.+++. .....+|.+||..+.-    .......|+.... -.
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~----G~~gq~~YaaAN~~ld  157 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL----GGPGQSAYAAANAFLD  157 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT----T-TTBHHHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc----cCcchHhHHHHHHHHH
Confidence            89999999986422111111   12223446888999988885 5678999999998762    2223345543322 22


Q ss_pred             HHHHHHHhcCCCEEEEecce
Q 025619          227 MGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       227 ~~e~~~~~~gi~~~~vrPg~  246 (250)
                      ...+..+..|.++.+|.-|.
T Consensus       158 a~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  158 ALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHTTSEEEEEEE-E
T ss_pred             HHHHHHHhCCCCEEEEEccc
Confidence            33344566789998887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.51  E-value=8.9e-14  Score=115.84  Aligned_cols=157  Identities=21%  Similarity=0.169  Sum_probs=122.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +..|-++-|.|||||+|+.++.+|++.|-+|++--|..+. ...++-.-+-..+-+...|+.|+++++++ .+.-++|||
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~v-vk~sNVVIN  136 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAV-VKHSNVVIN  136 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHH-HHhCcEEEE
Confidence            4567789999999999999999999999999999886542 22222111135678899999999999975 788999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      +.|.-. +    ...-.+.++|+.++.++++.|+ .|+.|+|++|+..+.-      .  +..-+-++|...|..+++.=
T Consensus       137 LIGrd~-e----Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv------~--s~Sr~LrsK~~gE~aVrdaf  203 (391)
T KOG2865|consen  137 LIGRDY-E----TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV------K--SPSRMLRSKAAGEEAVRDAF  203 (391)
T ss_pred             eecccc-c----cCCcccccccchHHHHHHHHHHhhChhheeehhhccccc------c--ChHHHHHhhhhhHHHHHhhC
Confidence            988532 1    1234466999999999999996 6899999999987541      1  12225578999999998877


Q ss_pred             CCEEEEecceEEe
Q 025619          237 LPFTIISLCIYCI  249 (250)
Q Consensus       237 i~~~~vrPg~v~~  249 (250)
                      -..+++||..+||
T Consensus       204 PeAtIirPa~iyG  216 (391)
T KOG2865|consen  204 PEATIIRPADIYG  216 (391)
T ss_pred             Ccceeechhhhcc
Confidence            7899999999987

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.48  E-value=1.4e-13  Score=112.85  Aligned_cols=166  Identities=19%  Similarity=0.212  Sum_probs=116.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-----CeEEEEecChhhHhhhhCcC----C--CCCeeEEEeeCCCccCcchhh-
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-----IKSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-----~~V~~~~R~~~~~~~~~~~~----~--~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      +.|+++|||+++|||.+++.+|++..     .++++.+|+-++++++...+    .  ..+++++..|+++..++.++. 
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            45899999999999999999999874     35778899998888753322    1  246788999999998888764 


Q ss_pred             -----hCCCcEEEEcCcCCCcCCCCC------------------------------CCCCCcceehHHHHHHHHHHcc--
Q 025619          149 -----FEGVTHVICCTGTTAFPSRRW------------------------------DGDNTPEKVDWEGVRNLVSALP--  191 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~~~~------------------------------~~~~~~~~~N~~g~~~l~~a~~--  191 (250)
                           +.++|.|+.|||.+..+..+|                              +.....++.||.|.+.+++.+.  
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                 678999999999876433221                              2234466899999999888662  


Q ss_pred             ---CCCCeEEEEccCcccccCCC-----CcchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          192 ---SSLKRIVLVSSVGVTKFNEL-----PWSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       192 ---~~~~~iV~iSS~~~~~~~~~-----~~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                         .....+|++||..+....-.     ......+|  +.+|+...       +-.+..|+.-.+++||...
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY--~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPY--SSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCc--chhHHHHHHHHHHHhccccccchhhhcccCceee
Confidence               23348999999887642100     01112233  34555443       2234568888899999764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.45  E-value=2.1e-12  Score=101.25  Aligned_cols=150  Identities=17%  Similarity=0.269  Sum_probs=108.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|.|.||||-+|++++++..++|++|+++.|++++..+.      .++.+++.|+.|++++.+. +.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~~-l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLASD-LAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHhh-hcCCceEEEeccCC
Confidence            4799999999999999999999999999999999987652      4678899999999998764 78999999987654


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHccC-CCCeEEEEccCccccc------CCCCcchhhHHHHHHHHH-HHHHHHHh
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF------NELPWSIMNLFGVLKYKK-MGEDFVQK  234 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~~~iV~iSS~~~~~~------~~~~~~~~~~y~~~k~k~-~~e~~~~~  234 (250)
                      ..      +..   .........+++.++. ++.|++.++..+...-      .+.|..|...|...+..+ .++..-.+
T Consensus        74 ~~------~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~  144 (211)
T COG2910          74 AS------DND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE  144 (211)
T ss_pred             CC------Chh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhc
Confidence            21      111   2234446778888864 8999999998777541      123334444444322222 23333345


Q ss_pred             cCCCEEEEecceEE
Q 025619          235 SGLPFTIISLCIYC  248 (250)
Q Consensus       235 ~gi~~~~vrPg~v~  248 (250)
                      .+++|+.+.|..++
T Consensus       145 ~~l~WTfvSPaa~f  158 (211)
T COG2910         145 KSLDWTFVSPAAFF  158 (211)
T ss_pred             cCcceEEeCcHHhc
Confidence            67999999998654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=9.1e-14  Score=112.36  Aligned_cols=160  Identities=17%  Similarity=0.095  Sum_probs=104.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE--ecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL--LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~--~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++|.+|+||+|.|||..++..+.+++-+....  .|.....+.+.-.. ........+|+++...+.+..      .++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            56899999999999999999988887654433  33332222221111 122233456666654333221      3578


Q ss_pred             cEEEEcCcCCCcC------CCCCCCCCCcceehHHHHHHHHHHc----cCC--CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSAL----PSS--LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~----~~~--~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |.+|||||.....      ..+.+....+|++|+.+...+...+    +..  .+.+|++||.+..    .|+.....|+
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav----~p~~~wa~yc  159 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV----RPFSSWAAYC  159 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh----ccccHHHHhh
Confidence            9999999986521      2223334567799999987777644    333  4789999999988    5777777777


Q ss_pred             HHHHHHHHHHHH-----Hh-cCCCEEEEecceE
Q 025619          221 VLKYKKMGEDFV-----QK-SGLPFTIISLCIY  247 (250)
Q Consensus       221 ~~k~k~~~e~~~-----~~-~gi~~~~vrPg~v  247 (250)
                      .+  |++.+.+.     ++ .++++..++||.+
T Consensus       160 ~~--KaAr~m~f~~lA~EEp~~v~vl~~aPGvv  190 (253)
T KOG1204|consen  160 SS--KAARNMYFMVLASEEPFDVRVLNYAPGVV  190 (253)
T ss_pred             hh--HHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence            54  55555443     34 4899999999986

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.36  E-value=2e-12  Score=116.01  Aligned_cols=164  Identities=25%  Similarity=0.327  Sum_probs=111.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC---CeEEEEecChhh------Hhhh-----hCcCC------CCCeeEEEeeCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEK------ATTL-----FGKQD------EETLQVCKGDTR  139 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~R~~~~------~~~~-----~~~~~------~~~~~~v~~Dl~  139 (250)
                      +.+|+|||||||||+|+-+++.|++.-   -+++++-|....      ++..     .+.+.      ..++..+.||++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            478999999999999999999999864   268888875431      1111     11110      246778999998


Q ss_pred             CccC-cch----hhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCccccc----
Q 025619          140 NPKD-LDP----AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKF----  208 (250)
Q Consensus       140 d~~~-~~~----~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~~----  208 (250)
                      +++- +.+    .+...+|+|||+||...+.+    .......+|..||+++++.++  ...+-+|++|++.+...    
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde----~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i  165 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDE----PLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI  165 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccch----hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence            8642 221    23678999999999887542    223344789999999999885  35678999999877631    


Q ss_pred             CCCCcc------h--------------------------hhHHHHHHHHHHHHHHHHh--cCCCEEEEecceEEe
Q 025619          209 NELPWS------I--------------------------MNLFGVLKYKKMGEDFVQK--SGLPFTIISLCIYCI  249 (250)
Q Consensus       209 ~~~~~~------~--------------------------~~~y~~~k~k~~~e~~~~~--~gi~~~~vrPg~v~~  249 (250)
                      ++.+++      +                          .+.|.  -+|+.+|..+.+  .+++++++||+.|..
T Consensus       166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYt--fTKal~E~~i~~~~~~lPivIiRPsiI~s  238 (467)
T KOG1221|consen  166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYT--FTKALAEMVIQKEAENLPLVIIRPSIITS  238 (467)
T ss_pred             cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCcee--ehHhhHHHHHHhhccCCCeEEEcCCceec
Confidence            011110      0                          12222  246677777754  589999999998853

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.33  E-value=2e-11  Score=107.42  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCChHHHH--HHHHHHHCCCeEEEEecChhh---------------HhhhhCcCCCCCeeEEEeeCCCccC
Q 025619           81 SSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPEK---------------ATTLFGKQDEETLQVCKGDTRNPKD  143 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~R~~~~---------------~~~~~~~~~~~~~~~v~~Dl~d~~~  143 (250)
                      .+|++|||||++|||.+  +++.| ++|++|+++++..+.               .++..+.. +..+..+++|++|+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            46899999999999999  89999 999999888853211               12122211 2345678999999988


Q ss_pred             cchhh------hCCCcEEEEcCcCCC
Q 025619          144 LDPAI------FEGVTHVICCTGTTA  163 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~  163 (250)
                      +++.+      ++++|+||||+|...
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCC
Confidence            87644      678999999999864

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.33  E-value=7.5e-12  Score=97.60  Aligned_cols=152  Identities=22%  Similarity=0.167  Sum_probs=114.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +.++..+|.||||-.|+.+.+++++.+-  +|+++.|++.-.++.     ...+.....|....++.... +.++|+.|.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a~~-~qg~dV~Fc   89 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLATN-EQGPDVLFC   89 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHHhh-hcCCceEEE
Confidence            4667899999999999999999999984  799999985221111     33566677888877777655 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      +-|......    ..+.+.++.-.-...+.++++ .|+++|+.+||.++...        +.+.|.+.|.+.|+.+.+..
T Consensus        90 aLgTTRgka----GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s--------SrFlY~k~KGEvE~~v~eL~  157 (238)
T KOG4039|consen   90 ALGTTRGKA----GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS--------SRFLYMKMKGEVERDVIELD  157 (238)
T ss_pred             eeccccccc----ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------cceeeeeccchhhhhhhhcc
Confidence            998775321    123344665555566777775 68999999999888632        33457789999999998877


Q ss_pred             C-CEEEEecceEEe
Q 025619          237 L-PFTIISLCIYCI  249 (250)
Q Consensus       237 i-~~~~vrPg~v~~  249 (250)
                      . ++.++|||.+.+
T Consensus       158 F~~~~i~RPG~ll~  171 (238)
T KOG4039|consen  158 FKHIIILRPGPLLG  171 (238)
T ss_pred             ccEEEEecCcceec
Confidence            6 688999998865

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.20  E-value=1.3e-10  Score=101.19  Aligned_cols=163  Identities=20%  Similarity=0.138  Sum_probs=107.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++|++|.|+|++|.||..++..|+.++  .++++++++.  ++....++.+........+.+|++++.++ +.++|+||+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~~~v~~~td~~~~~~~-l~gaDvVVi   82 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTPAKVTGYADGELWEKA-LRGADLVLI   82 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcCceEEEecCCCchHHH-hCCCCEEEE
Confidence            467799999999999999999998665  5899999932  22211111111223345677776764544 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccc---------cCCCCcchhhHHHHHHH--H
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK---------FNELPWSIMNLFGVLKY--K  225 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~---------~~~~~~~~~~~y~~~k~--k  225 (250)
                      +||....+..   ...+.+..|+..+.+++++++ .+.+++|+++|..+..         .....+++...||.+..  .
T Consensus        83 taG~~~~~~~---tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~  159 (321)
T PTZ00325         83 CAGVPRKPGM---TRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVV  159 (321)
T ss_pred             CCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHH
Confidence            9998643322   234456889999999999984 6889999999976643         13344566666765421  1


Q ss_pred             HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.-....+..++....|+ ++|+|
T Consensus       160 R~r~~la~~l~v~~~~V~-~~VlG  182 (321)
T PTZ00325        160 RARKFVAEALGMNPYDVN-VPVVG  182 (321)
T ss_pred             HHHHHHHHHhCcChhheE-EEEEe
Confidence            221122244577766666 66654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.19  E-value=3.5e-11  Score=97.44  Aligned_cols=148  Identities=21%  Similarity=0.173  Sum_probs=104.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi  156 (250)
                      +|+|||||++|-+|+++.+.+.++|.   +.+..+                   .-.+|+++.++.+++ |.  ++..||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------skd~DLt~~a~t~~l-F~~ekPthVI   60 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------SKDADLTNLADTRAL-FESEKPTHVI   60 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------cccccccchHHHHHH-HhccCCceee
Confidence            46899999999999999999998875   122211                   123799999998864 44  689999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCC-CCc---------chhhHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE-LPW---------SIMNLFGVLKYK  225 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~-~~~---------~~~~~y~~~k~k  225 (250)
                      |+|+....--.......+++..|+.-..|++..+ +.|++++|+..|.+.+.... .|.         +..+-|+|+-+|
T Consensus        61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAK  140 (315)
T KOG1431|consen   61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAK  140 (315)
T ss_pred             ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence            9998765322222344567788888888888866 68999999999999886321 011         112334555556


Q ss_pred             HHHH----HHHHhcCCCEEEEecceEEe
Q 025619          226 KMGE----DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e----~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+.    .+..++|-.++.+.|..+||
T Consensus       141 r~idv~n~aY~~qhg~~~tsviPtNvfG  168 (315)
T KOG1431|consen  141 RMIDVQNQAYRQQHGRDYTSVIPTNVFG  168 (315)
T ss_pred             HHHHHHHHHHHHHhCCceeeeccccccC
Confidence            5443    45567899999999999886

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.17  E-value=1.1e-10  Score=93.36  Aligned_cols=103  Identities=17%  Similarity=0.122  Sum_probs=75.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      |+++||||+|++ .++++.|+++|++|++++|++++.+.+...+. ...+.++.+|++|.+++++++      ++++|++
T Consensus         1 m~vlVtGGtG~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGML-KRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            479999999655 56999999999999999999887766543222 346788899999999988754      3567888


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC----eEEEEccCcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK----RIVLVSSVGV  205 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~----~iV~iSS~~~  205 (250)
                      |+.+                   .+.++.++..+++ .+++    +++++=...+
T Consensus        80 v~~v-------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~  115 (177)
T PRK08309         80 VAWI-------------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAA  115 (177)
T ss_pred             EEec-------------------cccchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence            8654                   2345677888774 4666    7888743333

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.08  E-value=1.3e-09  Score=88.56  Aligned_cols=161  Identities=14%  Similarity=0.139  Sum_probs=102.3

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+.||++||+|-.  ..|+..+++.|.++|+++..+..++.   +.+++.+++.  .-.+++||++|.+++++.+     
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHHH
Confidence            4789999999954  79999999999999999998877652   3344444332  2357899999999998654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC--CCC-----CCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFPS--RRW-----DGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~--~~~-----~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++.+|.|||+-|......  .++     +.....+++-..+...+.++++   ...+.+|.++=.++..    ..+.++
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r----~vPnYN  156 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSER----VVPNYN  156 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEecccee----ecCCCc
Confidence             678999999998764211  001     1111122334444445555553   3456777776544431    122223


Q ss_pred             HHHHHHHHHHHH-------HHHHhcCCCEEEEecceE
Q 025619          218 LFGVLKYKKMGE-------DFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       218 ~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v  247 (250)
                      .-|.  .|.++|       ..+...||||+.|.-|.+
T Consensus       157 vMGv--AKAaLEasvRyLA~dlG~~gIRVNaISAGPI  191 (259)
T COG0623         157 VMGV--AKAALEASVRYLAADLGKEGIRVNAISAGPI  191 (259)
T ss_pred             hhHH--HHHHHHHHHHHHHHHhCccCeEEeeecccch
Confidence            3233  344444       333457999999998876

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.97  E-value=9.7e-10  Score=89.27  Aligned_cols=151  Identities=16%  Similarity=0.092  Sum_probs=108.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      -...++.|+.++.|+++++.....|+.|.++.|+..+  ...+.. ...+.+..+|....+-.+.. ..++..++.++|-
T Consensus        52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw-~~~vswh~gnsfssn~~k~~-l~g~t~v~e~~gg  127 (283)
T KOG4288|consen   52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSW-PTYVSWHRGNSFSSNPNKLK-LSGPTFVYEMMGG  127 (283)
T ss_pred             HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCC-CcccchhhccccccCcchhh-hcCCcccHHHhcC
Confidence            3468999999999999999999999999999998652  222221 34567778888766655543 5678888888875


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHH-hcCCCE
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ-KSGLPF  239 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~-~~gi~~  239 (250)
                      ..       ....+..+|-....+..+++ +.|+++++|+|.....-      .+.-.-||-+.|+++|.++. .++.+-
T Consensus       128 fg-------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~------~~~i~rGY~~gKR~AE~Ell~~~~~rg  194 (283)
T KOG4288|consen  128 FG-------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGL------PPLIPRGYIEGKREAEAELLKKFRFRG  194 (283)
T ss_pred             cc-------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCC------CCccchhhhccchHHHHHHHHhcCCCc
Confidence            53       22223355666666666655 68999999999755421      11222367789999998774 578999


Q ss_pred             EEEecceEEe
Q 025619          240 TIISLCIYCI  249 (250)
Q Consensus       240 ~~vrPg~v~~  249 (250)
                      .++|||++|+
T Consensus       195 iilRPGFiyg  204 (283)
T KOG4288|consen  195 IILRPGFIYG  204 (283)
T ss_pred             eeeccceeec
Confidence            9999999997

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.84  E-value=8.9e-09  Score=83.59  Aligned_cols=83  Identities=23%  Similarity=0.216  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+.++.+.+.+.+. ..+.....+|..|.+++.++ +.++|+||+
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~diVi~  103 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAA-IKGADVVFA  103 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHH-HhcCCEEEE
Confidence            4578899999999999999999999999999999999988777654432 12445667888888887764 688999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +....
T Consensus       104 at~~g  108 (194)
T cd01078         104 AGAAG  108 (194)
T ss_pred             CCCCC
Confidence            76543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.82  E-value=1e-08  Score=84.34  Aligned_cols=142  Identities=18%  Similarity=0.229  Sum_probs=102.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCc---CCCCCeeEEEeeCCCccCcchhh-hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGK---QDEETLQVCKGDTRNPKDLDPAI-FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~-~~~~  152 (250)
                      .|+.||||-+|.=|+.+++.|+..||+|..+.|+.+.     .+.+-..   ..........+|++|...+.+.+ .-.+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            4689999999999999999999999999999887653     2322211   11345667889999998888753 2268


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC----CCCeEEEEccCcccc-------cCCCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTK-------FNELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~iV~iSS~~~~~-------~~~~~~~~~~~y~~  221 (250)
                      +-|+|+|+..++. ..++-++-.-++...|+.+++++.+.    ..-|+-..||.--|+       .+..|+.|.++|+.
T Consensus       108 tEiYnLaAQSHVk-vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  108 TEVYNLAAQSHVK-VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             hhhhhhhhhcceE-EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence            8999999987742 12223333447888999999998742    224677778777776       24567888899986


Q ss_pred             HHH
Q 025619          222 LKY  224 (250)
Q Consensus       222 ~k~  224 (250)
                      +|.
T Consensus       187 aKm  189 (376)
T KOG1372|consen  187 AKM  189 (376)
T ss_pred             hhh
Confidence            664

>PLN00106 malate dehydrogenase

Probab=98.81  E-value=1.5e-08  Score=88.30  Aligned_cols=119  Identities=18%  Similarity=0.150  Sum_probs=83.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++|.|||++|.||..++..|+.++.  +++++++++  .+....++.+........|+++.+++.++ +.+.|+|||.|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~-l~~aDiVVitA   94 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDA-LKGADLVIIPA   94 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHH-cCCCCEEEEeC
Confidence            35899999999999999999997764  799999977  22211122121222234465555566654 78999999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT  206 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~  206 (250)
                      |....+...   ..+....|+..++.+.+.++ .+...+|+++|--+.
T Consensus        95 G~~~~~g~~---R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD  139 (323)
T PLN00106         95 GVPRKPGMT---RDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN  139 (323)
T ss_pred             CCCCCCCCC---HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            986543322   23455889999999999884 577788888876553

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.81  E-value=9.7e-09  Score=92.00  Aligned_cols=77  Identities=18%  Similarity=0.249  Sum_probs=61.2

Q ss_pred             CCCCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc
Q 025619           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (250)
Q Consensus        79 ~~~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~  142 (250)
                      ++++|+||||||                +|++|.+++++|+++|++|++++++.+ .+.      ..+  +..+|+++.+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~------~~~--~~~~dv~~~~  255 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT------PAG--VKRIDVESAQ  255 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC------CCC--cEEEccCCHH
Confidence            468999999999                777999999999999999999998752 211      112  3467999988


Q ss_pred             Ccchhh---hCCCcEEEEcCcCCCc
Q 025619          143 DLDPAI---FEGVTHVICCTGTTAF  164 (250)
Q Consensus       143 ~~~~~~---~~~~D~vi~~Ag~~~~  164 (250)
                      ++.+++   ++++|++|||||+..+
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEccccccc
Confidence            877654   5689999999998654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.80  E-value=2.1e-08  Score=88.84  Aligned_cols=78  Identities=21%  Similarity=0.226  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |++|||.|| |+||+.++..|+++| .+|++.+|+.++++++.+.. ..+++..++|+.|.+++.++ +.+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-~~~v~~~~vD~~d~~al~~l-i~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-GGKVEALQVDAADVDALVAL-IKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-cccceeEEecccChHHHHHH-HhcCCEEEEeCC
Confidence            468999998 999999999999999 89999999999988875543 34899999999999999865 688899999986


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus        78 ~~   79 (389)
T COG1748          78 PF   79 (389)
T ss_pred             ch
Confidence            54

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.78  E-value=1.3e-08  Score=83.18  Aligned_cols=158  Identities=15%  Similarity=0.139  Sum_probs=107.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR-NIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~-G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~  158 (250)
                      ..+|||||+-|.+|..++..|..+ |-+ |++.+..... +.+.     ..-.++..|+.|...+++.+. .++|-+||-
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf  117 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF  117 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc-----ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence            348999999999999999988765 664 5554433221 1111     123467899999999998654 489999997


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCC--Cc------chhhHHHHHHHHHHH--
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNEL--PW------SIMNLFGVLKYKKMG--  228 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~--~~------~~~~~y~~~k~k~~~--  228 (250)
                      .+....- . ........++|+.|..|+++.+++..-++..-|+++++++...  |.      .|...||.+|..+++  
T Consensus       118 SALLSAv-G-E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~G  195 (366)
T KOG2774|consen  118 SALLSAV-G-ETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLG  195 (366)
T ss_pred             HHHHHHh-c-ccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHH
Confidence            7654311 1 1122334589999999999987655557778899999985321  11      245678988875543  


Q ss_pred             HHHHHhcCCCEEEEecceE
Q 025619          229 EDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       229 e~~~~~~gi~~~~vrPg~v  247 (250)
                      |-+..+.|+++-++|.+.+
T Consensus       196 Ey~~hrFg~dfr~~rfPg~  214 (366)
T KOG2774|consen  196 EYFNHRFGVDFRSMRFPGI  214 (366)
T ss_pred             HHHHhhcCccceecccCcc
Confidence            3444567998888875443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.73  E-value=8.3e-09  Score=85.83  Aligned_cols=70  Identities=11%  Similarity=0.172  Sum_probs=51.0

Q ss_pred             EEEEEc-CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEEE
Q 025619           84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI  156 (250)
Q Consensus        84 ~vlVTG-asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~vi  156 (250)
                      +=.||. ++||||+++|++|+++|++|+++++.. .+..      ..   ...+|+.|.+++++.+      ++++|++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~l~~------~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-ALKP------EP---HPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-hccc------cc---CCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            456665 488999999999999999999987632 1110      01   1347888877766532      56899999


Q ss_pred             EcCcCCC
Q 025619          157 CCTGTTA  163 (250)
Q Consensus       157 ~~Ag~~~  163 (250)
                      ||||+..
T Consensus        86 nnAgv~d   92 (227)
T TIGR02114        86 HSMAVSD   92 (227)
T ss_pred             ECCEecc
Confidence            9999764

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.71  E-value=3.5e-08  Score=85.10  Aligned_cols=81  Identities=16%  Similarity=0.115  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCh---hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~---~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +++|+++|||| ||+|++++..|++.|++ |++++|+.   ++.+++.+++.  ...+.+..+|++|.+++.+. +...|
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~-~~~~D  201 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAE-IASSD  201 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhh-hccCC
Confidence            56789999998 79999999999999996 99999986   56666554332  23445667899887777654 57789


Q ss_pred             EEEEcCcCC
Q 025619          154 HVICCTGTT  162 (250)
Q Consensus       154 ~vi~~Ag~~  162 (250)
                      +||||....
T Consensus       202 ilINaTp~G  210 (289)
T PRK12548        202 ILVNATLVG  210 (289)
T ss_pred             EEEEeCCCC
Confidence            999987554

>PRK09620 hypothetical protein; Provisional

Probab=98.66  E-value=3.5e-08  Score=82.05  Aligned_cols=82  Identities=18%  Similarity=0.282  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC
Q 025619           80 SSSKLVLVAGGS----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD  143 (250)
Q Consensus        80 ~~~k~vlVTGas----------------G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~  143 (250)
                      +.||+||||+|.                |+||+++|++|+++|++|+++++.........  ........+..|....+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~--~~~~~~~~V~s~~d~~~~   78 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI--NNQLELHPFEGIIDLQDK   78 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc--CCceeEEEEecHHHHHHH
Confidence            368999999886                99999999999999999999876432111100  001123345553333345


Q ss_pred             cchhhh--CCCcEEEEcCcCCCc
Q 025619          144 LDPAIF--EGVTHVICCTGTTAF  164 (250)
Q Consensus       144 ~~~~~~--~~~D~vi~~Ag~~~~  164 (250)
                      +.+. +  .++|+|||+|+...+
T Consensus        79 l~~~-~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         79 MKSI-ITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHH-hcccCCCEEEECccccce
Confidence            5543 4  368999999998654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.65  E-value=6.9e-08  Score=86.58  Aligned_cols=76  Identities=30%  Similarity=0.467  Sum_probs=61.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|.|| |++|+.+++.|++++-  +|++.+|+.++++.+.+.+...++..+++|+.|.++++++ +++.|+|||+++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~-~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAEL-LRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHH-HTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHH-HhcCCEEEECCccc
Confidence            789999 9999999999999874  8999999999998887654567899999999999998875 78999999999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.65  E-value=1.7e-07  Score=82.10  Aligned_cols=114  Identities=15%  Similarity=0.095  Sum_probs=72.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-------CeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G-------~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      +|+||||+|+||.+++..|+..+       .+|+++++++..  ++...-++.+. ......|+.+..++.++ +.++|+
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~~~-l~~aDi   81 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-AFPLLKSVVATTDPEEA-FKDVDV   81 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-cccccCCceecCCHHHH-hCCCCE
Confidence            69999999999999999999854       589999996531  22211111000 00112355445555444 789999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-C-CCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-S-LKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~-~~~iV~iSS  202 (250)
                      |||+||....+   ..+..+.++.|+.-...+.+.++ . . ...+|.+|.
T Consensus        82 VI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          82 AILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            99999986432   22334566889988888877663 2 2 345666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.59  E-value=9.6e-08  Score=79.58  Aligned_cols=74  Identities=11%  Similarity=0.256  Sum_probs=50.7

Q ss_pred             EEEEEc-CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc--cCcchhhhCCCcEEEEcCc
Q 025619           84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTG-asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +-.||+ +||+||++++++|+++|++|++++|+.....     ....+++++.++-.+.  +.+.+. ++++|+||||||
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~~~~~v~~i~v~s~~~m~~~l~~~-~~~~DivIh~AA   90 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----EPHPNLSIIEIENVDDLLETLEPL-VKDHDVLIHSMA   90 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----CCCCCeEEEEEecHHHHHHHHHHH-hcCCCEEEeCCc
Confidence            556775 5677999999999999999999987643211     0123566666543321  234333 578999999999


Q ss_pred             CCC
Q 025619          161 TTA  163 (250)
Q Consensus       161 ~~~  163 (250)
                      ...
T Consensus        91 vsd   93 (229)
T PRK06732         91 VSD   93 (229)
T ss_pred             cCC
Confidence            865

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.51  E-value=2.3e-07  Score=82.89  Aligned_cols=104  Identities=13%  Similarity=0.140  Sum_probs=71.3

Q ss_pred             CCCCCEEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc
Q 025619           79 ASSSKLVLVAGG---------------SGG-VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (250)
Q Consensus        79 ~~~~k~vlVTGa---------------sG~-IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~  142 (250)
                      ++++|+|+||||               |+| +|.+++++|..+|++|+++.++....  .     ...  ....|+++.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~-----~~~--~~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--T-----PPG--VKSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--C-----CCC--cEEEEeccHH
Confidence            468999999999               445 99999999999999999988765321  0     122  2568998887


Q ss_pred             Ccchhh----hCCCcEEEEcCcCCCcCC-CC----CCCCCCcceehHHHHHHHHHHcc
Q 025619          143 DLDPAI----FEGVTHVICCTGTTAFPS-RR----WDGDNTPEKVDWEGVRNLVSALP  191 (250)
Q Consensus       143 ~~~~~~----~~~~D~vi~~Ag~~~~~~-~~----~~~~~~~~~~N~~g~~~l~~a~~  191 (250)
                      ++.+++    ++++|++|||||+..+.. ..    .......+.+|+.-+..+++.++
T Consensus       253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            773222    457999999999976422 11    11112233567777777777664

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.48  E-value=5.6e-07  Score=68.82  Aligned_cols=78  Identities=27%  Similarity=0.331  Sum_probs=59.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++++++|.|+ ||+|++++..|.+.|++ |+++.|+.++++++.+.+....+.+  .++.+   +.+. ..+.|+||+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~--~~~~~---~~~~-~~~~DivI~   81 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEA--IPLED---LEEA-LQEADIVIN   81 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEE--EEGGG---HCHH-HHTESEEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccce--eeHHH---HHHH-HhhCCeEEE
Confidence            568899999996 99999999999999986 9999999999988876653334443  33333   3333 578999999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +.+...
T Consensus        82 aT~~~~   87 (135)
T PF01488_consen   82 ATPSGM   87 (135)
T ss_dssp             -SSTTS
T ss_pred             ecCCCC
Confidence            987643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.47  E-value=3.4e-07  Score=80.11  Aligned_cols=74  Identities=22%  Similarity=0.277  Sum_probs=57.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-C-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++.+|+|+||||+|.||+.++++|+++ | .+++++.|+.+++..+..++.       .+|+.+   +.++ +.++|+||
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-------~~~i~~---l~~~-l~~aDiVv  220 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-------GGKILS---LEEA-LPEADIVV  220 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-------cccHHh---HHHH-HccCCEEE
Confidence            468899999999999999999999865 5 589999999888877654331       233333   4443 67899999


Q ss_pred             EcCcCCC
Q 025619          157 CCTGTTA  163 (250)
Q Consensus       157 ~~Ag~~~  163 (250)
                      |+++...
T Consensus       221 ~~ts~~~  227 (340)
T PRK14982        221 WVASMPK  227 (340)
T ss_pred             ECCcCCc
Confidence            9998754

>PRK05086 malate dehydrogenase; Provisional

Probab=98.47  E-value=9.3e-07  Score=77.03  Aligned_cols=115  Identities=23%  Similarity=0.232  Sum_probs=74.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-C--CCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLS-R--NIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~-~--G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      |+|+|.||+|+||++++..|.. .  ++++++++|++. .+...-.+.+ .....+.+  .+.+++.+. +.++|+||.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~--~~~~d~~~~-l~~~DiVIit   76 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKG--FSGEDPTPA-LEGADVVLIS   76 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEE--eCCCCHHHH-cCCCCEEEEc
Confidence            5899999999999999998855 2  457888888743 2111111111 11122333  223344333 5789999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVG  204 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~  204 (250)
                      +|..+.+.   ....+.+..|......++++++ .+.+++|.+.|-=
T Consensus        77 aG~~~~~~---~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP  120 (312)
T PRK05086         77 AGVARKPG---MDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP  120 (312)
T ss_pred             CCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence            99865332   1334456789999999999884 5677777777743

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.31  E-value=2.1e-06  Score=74.27  Aligned_cols=80  Identities=21%  Similarity=0.329  Sum_probs=67.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHH----CCCeEEEEecChhhHhhhhCcCC---C---CCeeEEEeeCCCccCcchhhhCCCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD---E---ETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~----~G~~V~~~~R~~~~~~~~~~~~~---~---~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      -++|-||||+.|..+++++++    .|..+-+.+|+++++++..+...   .   ....++.+|.+|++++.+. .+++.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em-ak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEM-AKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHH-HhhhE
Confidence            589999999999999999999    78899999999999888654322   1   1223788999999999975 68999


Q ss_pred             EEEEcCcCCCc
Q 025619          154 HVICCTGTTAF  164 (250)
Q Consensus       154 ~vi~~Ag~~~~  164 (250)
                      +|+||+|...+
T Consensus        86 vivN~vGPyR~   96 (423)
T KOG2733|consen   86 VIVNCVGPYRF   96 (423)
T ss_pred             EEEecccccee
Confidence            99999998764

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.25  E-value=2.7e-06  Score=77.72  Aligned_cols=77  Identities=21%  Similarity=0.244  Sum_probs=57.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+|+|+|+++ +|.++++.|+++|++|++++++. +..++..+++...++.++.+|..|     + ..+++|+||+
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~-~~~~~d~vv~   74 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----E-FLEGVDLVVV   74 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----h-HhhcCCEEEE
Confidence            45789999999877 99999999999999999999975 333322222223356777788776     2 2577999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      ++|..
T Consensus        75 ~~g~~   79 (450)
T PRK14106         75 SPGVP   79 (450)
T ss_pred             CCCCC
Confidence            99874

>cd00704 MDH Malate dehydrogenase

Probab=98.13  E-value=1.1e-05  Score=70.49  Aligned_cols=102  Identities=18%  Similarity=0.186  Sum_probs=69.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCc-----------cC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-----------KD  143 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~-----------~~  143 (250)
                      +|.||||+|.||..++..|+.+|.       +++++++++  +.++.            ...|+.|.           .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g------------~~~Dl~d~~~~~~~~~~i~~~   69 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG------------VVMELQDCAFPLLKGVVITTD   69 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce------------eeeehhhhcccccCCcEEecC
Confidence            689999999999999999998663       499999876  43222            23344333           22


Q ss_pred             cchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC--CCeEEEEc
Q 025619          144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS--LKRIVLVS  201 (250)
Q Consensus       144 ~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~--~~~iV~iS  201 (250)
                      ..+. +.++|+|||.||....+.   .+..+.++.|..-.+.+.+.++ ..  ...+|.+|
T Consensus        70 ~~~~-~~~aDiVVitAG~~~~~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          70 PEEA-FKDVDVAILVGAFPRKPG---MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hHHH-hCCCCEEEEeCCCCCCcC---CcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            3333 789999999999865332   2334456778888888888774 32  34555555

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.12  E-value=1.2e-05  Score=70.43  Aligned_cols=105  Identities=16%  Similarity=0.114  Sum_probs=69.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-----------Ccc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-----------DLD  145 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-----------~~~  145 (250)
                      +|.|+||+|.||..++..|+..|.       ++++++++++..          ..+....|+.|..           +..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence            489999999999999999998653       599999865421          0122334444433           222


Q ss_pred             hhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C-C-CeEEEEcc
Q 025619          146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-L-KRIVLVSS  202 (250)
Q Consensus       146 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~-~-~~iV~iSS  202 (250)
                      +. +.++|+||++||....+   .++..+..+.|+.-.+.+.+.+++ . . ..+|.+|.
T Consensus        71 ~~-~~~aDiVVitAG~~~~~---~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        71 VA-FTDVDVAILVGAFPRKE---GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HH-hCCCCEEEEcCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            22 68999999999986432   222344557888888888888743 2 3 45666553

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=98.01  E-value=2.7e-05  Score=66.85  Aligned_cols=76  Identities=21%  Similarity=0.290  Sum_probs=55.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+.+|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+....    ..++ +. +..+. ..+.|+|||
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~----~~~~-~~-~~~~~-~~~~DivIn  191 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG----KAEL-DL-ELQEE-LADFDLIIN  191 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc----ceee-cc-cchhc-cccCCEEEE
Confidence            357789999996 999999999999999 689999999998887765442111    0122 11 22222 467899999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +....
T Consensus       192 aTp~g  196 (278)
T PRK00258        192 ATSAG  196 (278)
T ss_pred             CCcCC
Confidence            88654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.01  E-value=2.2e-05  Score=60.98  Aligned_cols=76  Identities=22%  Similarity=0.174  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +++++++|+|+ |++|..+++.|.+.| ++|.+++|++++.+++.+......   +..+..|.+   +. .+++|+||++
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~---~~~~~~~~~---~~-~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG---IAIAYLDLE---EL-LAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc---cceeecchh---hc-cccCCEEEeC
Confidence            45689999997 999999999999996 789999999988776554332111   223333332   22 4789999999


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      .....
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            86543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.00  E-value=2e-05  Score=68.89  Aligned_cols=161  Identities=14%  Similarity=0.126  Sum_probs=92.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecChhh--HhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~~~--~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~  152 (250)
                      ++|.|+||+|.||..++..|+..|.       ++++++++++.  ++..+.++.+...... ...++. ++ .+. +.+.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~-~~~-~~da   79 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-DP-NVA-FKDA   79 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-Cc-HHH-hCCC
Confidence            4899999999999999999998875       69999985432  3332222211110000 011221 11 222 6789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC--CCeEEEEccCcccc----cCCCC-cchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS--LKRIVLVSSVGVTK----FNELP-WSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~--~~~iV~iSS~~~~~----~~~~~-~~~~~~y~~~k~  224 (250)
                      |+||.+||....+.   .+..+.++.|..-.+.+.+.++ .+  ...+|.+|...-..    ....+ +++...||.++.
T Consensus        80 DivvitaG~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~L  156 (322)
T cd01338          80 DWALLVGAKPRGPG---MERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRL  156 (322)
T ss_pred             CEEEEeCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEehHH
Confidence            99999999865332   2334456788888888888774 33  34566666322110    11222 555566665332


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                        .+....+.+..|++...++.-+|+|
T Consensus       157 Ds~Rl~~~la~~lgv~~~~v~~~~V~G  183 (322)
T cd01338         157 DHNRAKSQLAKKAGVPVTDVKNMVIWG  183 (322)
T ss_pred             HHHHHHHHHHHHhCcChhHeEEEEEEe
Confidence              2222223345677777776655554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.98  E-value=4.1e-05  Score=68.43  Aligned_cols=104  Identities=22%  Similarity=0.270  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.++|.|.||||.+|.++++.|.++ +.+|..+.++.+..+.+.+.    .......|+.+.++++.+.+.++|+||.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al  112 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLPNLVAVKDADFSDVDAVFCCL  112 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCccccceecCCHHHhcCCCEEEEcC
Confidence            4468999999999999999999998 67899988865543322211    112233565555555544357899999976


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccccc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF  208 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~  208 (250)
                      +..                   ....++++++.+ .++|-+|+..-..+
T Consensus       113 p~~-------------------~s~~i~~~~~~g-~~VIDlSs~fRl~~  141 (381)
T PLN02968        113 PHG-------------------TTQEIIKALPKD-LKIVDLSADFRLRD  141 (381)
T ss_pred             CHH-------------------HHHHHHHHHhCC-CEEEEcCchhccCC
Confidence            421                   345566666544 68999999877653

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.96  E-value=6.8e-05  Score=62.31  Aligned_cols=75  Identities=25%  Similarity=0.395  Sum_probs=62.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+++|.| .|-+|..+|+.|.++|++|+++++++++.++....  ....+.+.+|-+|++.++++=....|+++-..+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~--~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD--ELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh--hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            4677777 69999999999999999999999999987763321  246788999999999999864678999997654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.95  E-value=1.5e-05  Score=67.34  Aligned_cols=75  Identities=13%  Similarity=0.179  Sum_probs=56.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~Ag~  161 (250)
                      |+|||+||||. |+.++++|.++|++|++..++....+.+.+    .+...+..+..|.+++.+.+ -.++|+||+.+..
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            47999999999 999999999999999999998865544331    22334556677777777553 2369999998865


Q ss_pred             C
Q 025619          162 T  162 (250)
Q Consensus       162 ~  162 (250)
                      .
T Consensus        76 f   76 (256)
T TIGR00715        76 F   76 (256)
T ss_pred             H
Confidence            4

This enzyme was found to be a monomer by gel filtration.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.95  E-value=2.3e-05  Score=63.09  Aligned_cols=76  Identities=17%  Similarity=0.295  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC
Q 025619           80 SSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD  143 (250)
Q Consensus        80 ~~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~  143 (250)
                      ++||+||||+|                ||-.|.++|+++..+|++|+++.... ....      ..++..+  ++.+.++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~------p~~~~~i--~v~sa~e   71 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLPP------PPGVKVI--RVESAEE   71 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S----------TTEEEE--E-SSHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-cccc------cccceEE--Eecchhh
Confidence            36788888876                68999999999999999999998763 2211      2355444  4555555


Q ss_pred             cchhh---hCCCcEEEEcCcCCCc
Q 025619          144 LDPAI---FEGVTHVICCTGTTAF  164 (250)
Q Consensus       144 ~~~~~---~~~~D~vi~~Ag~~~~  164 (250)
                      +.+++   +...|++||+|++..+
T Consensus        72 m~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   72 MLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             hhhhhccccCcceeEEEecchhhe
Confidence            54443   5678999999998764

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.94  E-value=6.9e-05  Score=57.68  Aligned_cols=111  Identities=14%  Similarity=0.159  Sum_probs=71.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++|.|+||+|.+|.+++..|+..+.  +++++++++++++....++.    .......... .+   .+ . +++.|+||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~---~~-~-~~~aDivv   74 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD---YE-A-LKDADIVV   74 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS---GG-G-GTTESEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cc---cc-c-cccccEEE
Confidence            4799999999999999999999874  79999999876655432221    1112211111 22   22 2 56789999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      ..||....+..   +..+.++.|..-.+.+.+.+. .+. ..++.+|.
T Consensus        75 itag~~~~~g~---sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   75 ITAGVPRKPGM---SRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             ETTSTSSSTTS---SHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             Eeccccccccc---cHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence            99998653322   233455778888888888773 233 45555543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.89  E-value=4e-05  Score=66.73  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=69.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCh--hhHhhhhCcCCC----CCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDP--EKATTLFGKQDE----ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~--~~~~~~~~~~~~----~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ++|.|+||+|.+|..++..|+..|.  +|++++|++  ++++.....+..    .... .....+  .+.+ . +.+.|+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~--~d~~-~-l~~aDi   75 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKIS--SDLS-D-VAGSDI   75 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEEC--CCHH-H-hCCCCE
Confidence            4799999999999999999999986  499999954  333322211110    0000 011111  1222 2 688999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC--CCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~iV~iSS~  203 (250)
                      ||.++|....+.   .+..+..+.|..-...+.+.+.+  ....+|.+++.
T Consensus        76 Viitag~p~~~~---~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          76 VIITAGVPRKEG---MSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             EEEecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            999999754221   12233456788878888777632  23467777764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.86  E-value=1.7e-05  Score=68.24  Aligned_cols=77  Identities=21%  Similarity=0.269  Sum_probs=62.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      ..++|-||+|+.|.-++++|+++|.+-.+.+|+..+++.+...+ ++....++++  +++.+++ ...+.++|+||+|..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-G~~~~~~p~~--~p~~~~~-~~~~~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-GPEAAVFPLG--VPAALEA-MASRTQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-CccccccCCC--CHHHHHH-HHhcceEEEeccccc
Confidence            47999999999999999999999999999999999998876655 3344444443  3777775 378999999999986


Q ss_pred             C
Q 025619          163 A  163 (250)
Q Consensus       163 ~  163 (250)
                      .
T Consensus        83 t   83 (382)
T COG3268          83 T   83 (382)
T ss_pred             c
Confidence            5

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.84  E-value=7.6e-05  Score=63.76  Aligned_cols=74  Identities=22%  Similarity=0.257  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ..+|+++|+|+ |++|++++..|++.|++|++++|+.++.+++.+.+.. .....  .+..+      ....++|+|||+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~--~~~~~------~~~~~~DivIna  185 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA--FSMDE------LPLHRVDLIINA  185 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE--echhh------hcccCccEEEEC
Confidence            35789999998 8999999999999999999999999888776654322 11121  11111      113568999999


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .+..
T Consensus       186 tp~g  189 (270)
T TIGR00507       186 TSAG  189 (270)
T ss_pred             CCCC
Confidence            8764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.84  E-value=0.00015  Score=72.08  Aligned_cols=77  Identities=21%  Similarity=0.126  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IK-------------SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP  146 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~-------------V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~  146 (250)
                      .+|+|+|.|| |.||+..++.|++.. ++             |.+.+++.++++++.+..  ++++.++.|++|.+++.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~--~~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI--ENAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc--CCCceEEeecCCHHHHHH
Confidence            4789999996 999999999998753 33             888899988887766543  357789999999998886


Q ss_pred             hhhCCCcEEEEcCcC
Q 025619          147 AIFEGVTHVICCTGT  161 (250)
Q Consensus       147 ~~~~~~D~vi~~Ag~  161 (250)
                      + +.++|+||++...
T Consensus       645 ~-v~~~DaVIsalP~  658 (1042)
T PLN02819        645 Y-VSQVDVVISLLPA  658 (1042)
T ss_pred             h-hcCCCEEEECCCc
Confidence            4 5789999998753

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.77  E-value=0.00013  Score=59.55  Aligned_cols=70  Identities=19%  Similarity=0.092  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++++|+++|+|. |.+|+.+++.|.+.|++|++.++++++.+.+.+.+   +...  +|.   +++.   ..++|+++.+
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~---g~~~--v~~---~~l~---~~~~Dv~vp~   92 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF---GATV--VAP---EEIY---SVDADVFAPC   92 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc---CCEE--Ecc---hhhc---cccCCEEEec
Confidence            578899999997 69999999999999999999999988777665432   2222  221   2222   2368999987


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      |.
T Consensus        93 A~   94 (200)
T cd01075          93 AL   94 (200)
T ss_pred             cc
Confidence            75

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.77  E-value=5.9e-05  Score=70.39  Aligned_cols=75  Identities=20%  Similarity=0.176  Sum_probs=53.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+.+..   ..  .++.+   ..+......|+|||+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~---~~--~~~~~---~~~~~~~~~diiINt  446 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG---QA--LTLAD---LENFHPEEGMILANT  446 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC---ce--eeHhH---hhhhccccCeEEEec
Confidence            457899999998 7999999999999999999999999888877654321   11  12222   121112346888887


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      ....
T Consensus       447 T~vG  450 (529)
T PLN02520        447 TSVG  450 (529)
T ss_pred             ccCC
Confidence            7654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.76  E-value=8.6e-05  Score=54.77  Aligned_cols=70  Identities=30%  Similarity=0.445  Sum_probs=57.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |+|.|. |-+|..+++.|.+.+.+|++++++++..+.+.+    .++.++.+|.+|++.++++-..+.+.+|-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cccccccccchhhhHHhhcCccccCEEEEcc
Confidence            567775 789999999999977799999999988777653    3588999999999999976567889888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.75  E-value=0.00011  Score=64.10  Aligned_cols=115  Identities=15%  Similarity=0.146  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+++|.|+|+ |.+|..++..|+..|.  ++++++++.++++....++.+.........+.. .+.+ . +++.|+||..
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-~~~~-~-~~~adivIit   80 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-GDYS-D-CKDADLVVIT   80 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-CCHH-H-hCCCCEEEEe
Confidence            5679999998 9999999999999986  799999988776554433221100000111221 2233 2 6889999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ||....+.   .+..+..+.|..-.+.+++.++ .+ ...++.+|-
T Consensus        81 ag~~~k~g---~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         81 AGAPQKPG---ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             cCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            99865332   2334455778888888777663 33 345666553

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.75  E-value=9.1e-05  Score=67.70  Aligned_cols=74  Identities=22%  Similarity=0.291  Sum_probs=60.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+|+|.|+ |.+|+++++.|.++|++|+++++++++.+.+.+   ..++.++.+|.++.+.++++-.+++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD---RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh---hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            37899997 999999999999999999999999988777643   236788999999988877643567888887653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.69  E-value=0.00014  Score=66.56  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ..+++++|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+.  ..++.++.+|.+|.+.++++-..+.|.||-+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            35679999997 9999999999999999999999999887766543  23577899999999888766567899998654

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.65  E-value=9.4e-05  Score=67.58  Aligned_cols=78  Identities=19%  Similarity=0.162  Sum_probs=51.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~  157 (250)
                      ++.+|+|+|||+++ +|.++++.|+++|++|++.+++........+.+...++.+..++  +...+    .. ++|.||+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~----~~~~~d~vV~   74 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL----LDEDFDLMVK   74 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH----hcCcCCEEEE
Confidence            35789999999976 99999999999999999998765322221111112244443322  11111    23 4899999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      ++|+..
T Consensus        75 s~gi~~   80 (447)
T PRK02472         75 NPGIPY   80 (447)
T ss_pred             CCCCCC
Confidence            998753

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.65  E-value=0.00013  Score=63.44  Aligned_cols=108  Identities=17%  Similarity=0.210  Sum_probs=71.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCC------CCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ++|.|.|+ |++|+.++..|+..|  .+|++++|++++.+....++..      ....+ ..  .+   .+ . +.+.|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~~--~~---~~-~-l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKI-KA--GD---YS-D-CKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-Ec--CC---HH-H-hCCCCE
Confidence            37899995 999999999999999  5899999998877665443311      11111 11  11   22 2 578999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ||+++|....+.   .+..+..+.|..-.+.+.+.++ .+ ...++.+|.
T Consensus        72 VIitag~~~~~g---~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          72 VVITAGAPQKPG---ETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEEccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999999764332   2333455778887888887774 22 345666663

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.57  E-value=0.00024  Score=61.12  Aligned_cols=78  Identities=15%  Similarity=0.151  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+|+++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+... .....  +...+++... ..+.|+|||+
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~-~~~~~--~~~~~~~~~~-~~~~DiVIna  197 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV-GVITR--LEGDSGGLAI-EKAAEVLVST  197 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc-Cccee--ccchhhhhhc-ccCCCEEEEC
Confidence            4678999998 59999999999999997 6999999999988876544211 11111  1111223322 4678999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      ....
T Consensus       198 Tp~g  201 (282)
T TIGR01809       198 VPAD  201 (282)
T ss_pred             CCCC
Confidence            7653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.55  E-value=0.00032  Score=60.08  Aligned_cols=77  Identities=22%  Similarity=0.237  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ..+++++|.| +||.+++++..|++.|. +|+++.|+.++.+++.+.+..........+..+.+...     ..|+|||+
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----~~dliINa  197 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----EADLLINA  197 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----ccCEEEEC
Confidence            4578999999 69999999999999995 79999999999988876554222111112222222221     57999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      ....
T Consensus       198 Tp~G  201 (283)
T COG0169         198 TPVG  201 (283)
T ss_pred             CCCC
Confidence            7654

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.55  E-value=0.00028  Score=61.99  Aligned_cols=99  Identities=20%  Similarity=0.244  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---CcchhhhC-CCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFE-GVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~~-~~D~vi~  157 (250)
                      +++|||+||+||+|...++.+...|+.++++..+.++.+.+. .+.. . +  ..|..+.+   .+++..-+ ++|+|+.
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGA-d-~--vi~y~~~~~~~~v~~~t~g~gvDvv~D  217 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGA-D-H--VINYREEDFVEQVRELTGGKGVDVVLD  217 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCC-C-E--EEcCCcccHHHHHHHHcCCCCceEEEE
Confidence            789999999999999999988888988877777777766433 2211 1 1  12333332   22222122 6999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      ..|...                   ....++.++.+ ++++.+.....
T Consensus       218 ~vG~~~-------------------~~~~l~~l~~~-G~lv~ig~~~g  245 (326)
T COG0604         218 TVGGDT-------------------FAASLAALAPG-GRLVSIGALSG  245 (326)
T ss_pred             CCCHHH-------------------HHHHHHHhccC-CEEEEEecCCC
Confidence            876421                   12345556666 78888887664

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.54  E-value=0.00019  Score=64.91  Aligned_cols=76  Identities=21%  Similarity=0.211  Sum_probs=57.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+++|+|.|+ |++|+.+++.|...|. +++++.|+.++.+.+.+.+..  ...+     ..+++.+. +...|+||+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~~-----~~~~l~~~-l~~aDiVI~  248 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASAH-----YLSELPQL-IKKADIIIA  248 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeEe-----cHHHHHHH-hccCCEEEE
Confidence            457889999996 9999999999999996 699999999988887765421  1111     12334433 678999999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +.+..+
T Consensus       249 aT~a~~  254 (414)
T PRK13940        249 AVNVLE  254 (414)
T ss_pred             CcCCCC
Confidence            988654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.52  E-value=0.0002  Score=61.61  Aligned_cols=73  Identities=23%  Similarity=0.378  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC--CCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~--~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ..+|+|+|.| +||.|++++..|++.|. +|++++|+.++.+.+.+.+..  ....+.  ..   +++.+. +.+.|+||
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~--~~---~~~~~~-~~~aDiVI  197 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT--AG---SDLAAA-LAAADGLV  197 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE--ec---cchHhh-hCCCCEEE
Confidence            4678999999 58899999999999997 799999999998887654421  112221  11   223322 46789999


Q ss_pred             EcC
Q 025619          157 CCT  159 (250)
Q Consensus       157 ~~A  159 (250)
                      |+.
T Consensus       198 naT  200 (284)
T PRK12549        198 HAT  200 (284)
T ss_pred             ECC
Confidence            984

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.46  E-value=0.00063  Score=59.22  Aligned_cols=115  Identities=20%  Similarity=0.226  Sum_probs=71.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCee-EEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQ-VCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|+|++|.+|.+++..|+.+|.  ++++++.+  +++...-++.+.... -+.+ ....+++.+. +++.|+||..|
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~-~~~~~~~y~~-~~daDivvita   76 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTG-YLGPEELKKA-LKGADVVVIPA   76 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEE-ecCCCchHHh-cCCCCEEEEeC
Confidence            3799999999999999999998884  79999987  332222112111110 1111 1011223333 68899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVG  204 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~  204 (250)
                      |....+.   ....+..+.|..-.+.+.+.++ .+ ...+|++|-..
T Consensus        77 G~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          77 GVPRKPG---MTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence            9864332   2334455778888888888773 33 34667666544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.45  E-value=0.00063  Score=58.93  Aligned_cols=113  Identities=18%  Similarity=0.181  Sum_probs=71.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCC-eeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~-~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|+|| |+||+.++..|+.++.  +++++++++++++....++.+.. .......+....+.+ . +.+.|+|+-.|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~-~-~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYE-D-LKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChh-h-hcCCCEEEEeC
Confidence            47999999 9999999999988763  79999999665544332222111 111112222222233 2 57889999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVS  201 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iS  201 (250)
                      |...-|.+   ...+.++.|..-...+.+.+. .+.. .++.+|
T Consensus        78 G~prKpGm---tR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          78 GVPRKPGM---TRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCCCCCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            98765543   334455788888888887763 3333 444444

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.44  E-value=0.00047  Score=61.60  Aligned_cols=76  Identities=14%  Similarity=0.084  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +..++|+|.|+ |.+|+.+++.+.+.|++|++++|++++.+.+.....    ..+..+..+.+.+.+. +.+.|+||+++
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g----~~v~~~~~~~~~l~~~-l~~aDvVI~a~  238 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG----GRIHTRYSNAYEIEDA-VKRADLLIGAV  238 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC----ceeEeccCCHHHHHHH-HccCCEEEEcc
Confidence            45678999986 899999999999999999999999888766543321    1233455556666654 67899999988


Q ss_pred             cC
Q 025619          160 GT  161 (250)
Q Consensus       160 g~  161 (250)
                      +.
T Consensus       239 ~~  240 (370)
T TIGR00518       239 LI  240 (370)
T ss_pred             cc
Confidence            65

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.44  E-value=0.0018  Score=56.14  Aligned_cols=100  Identities=17%  Similarity=0.121  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+.+ .   +.. ...|..+.+..+...    -+++|+++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i  240 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-L---GAD-YVIDYRKEDFVREVRELTGKRGVDVVV  240 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC-eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence            46799999999999999999999999999999999877665432 1   111 123554433322211    13689999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      +++|...                   ....++.++.+ ++++.+++...
T Consensus       241 ~~~g~~~-------------------~~~~~~~l~~~-G~~v~~~~~~~  269 (342)
T cd08266         241 EHVGAAT-------------------WEKSLKSLARG-GRLVTCGATTG  269 (342)
T ss_pred             ECCcHHH-------------------HHHHHHHhhcC-CEEEEEecCCC
Confidence            9987311                   12234444444 68888887654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.44  E-value=0.00049  Score=59.32  Aligned_cols=70  Identities=14%  Similarity=0.113  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+++++|.|. |.+|+.+++.|...|++|++.+|++++.+...+    .+...+  +   .+++.+. +.+.|+||++
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~----~g~~~~--~---~~~l~~~-l~~aDiVint  216 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE----MGLIPF--P---LNKLEEK-VAEIDIVINT  216 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeee--c---HHHHHHH-hccCCEEEEC
Confidence            467899999996 889999999999999999999999876554331    122211  1   2234433 5789999997


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      .
T Consensus       217 ~  217 (287)
T TIGR02853       217 I  217 (287)
T ss_pred             C
Confidence            6

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.43  E-value=0.00042  Score=61.02  Aligned_cols=70  Identities=26%  Similarity=0.302  Sum_probs=44.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCe---EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~---V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +++|+|.||||++|+++++.|.++|+.   +..+.++.+..+.+.  +  .+......|+.+.     . +.++|+||.+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~--~g~~i~v~d~~~~-----~-~~~vDvVf~A   70 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--F--KGKELKVEDLTTF-----D-FSGVDIALFS   70 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--e--CCceeEEeeCCHH-----H-HcCCCEEEEC
Confidence            358999999999999999999998864   577776654333221  1  1223344455431     1 3467777776


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ++.
T Consensus        71 ~g~   73 (334)
T PRK14874         71 AGG   73 (334)
T ss_pred             CCh
Confidence            654

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.42  E-value=0.00073  Score=59.59  Aligned_cols=78  Identities=24%  Similarity=0.266  Sum_probs=53.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh---------------------hhHhhhhCcC----CCCCee
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---------------------EKATTLFGKQ----DEETLQ  132 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~---------------------~~~~~~~~~~----~~~~~~  132 (250)
                      .++.++|+|.|+ |++|.++++.|++.|. ++++++++.                     .|.+.+++.+    ..-.++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            356779999995 8899999999999998 799998874                     1222221111    123455


Q ss_pred             EEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619          133 VCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       133 ~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+..|+++ +.+++. +.+.|+||.+.
T Consensus       100 ~~~~~~~~-~~~~~~-~~~~DlVid~~  124 (338)
T PRK12475        100 PVVTDVTV-EELEEL-VKEVDLIIDAT  124 (338)
T ss_pred             EEeccCCH-HHHHHH-hcCCCEEEEcC
Confidence            56667753 345543 68899999875

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.42  E-value=0.00054  Score=59.98  Aligned_cols=112  Identities=15%  Similarity=0.126  Sum_probs=69.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCh--hhHhhhhCcCCCCCeeEEE-eeCCCccCcchhhhCCCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~--~~~~~~~~~~~~~~~~~v~-~Dl~d~~~~~~~~~~~~D  153 (250)
                      +|.|+||+|.+|..++..|+..|.       +++++++++  ++++....++.+....... ..++  ....+. +.+.|
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~-~~daD   81 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEA-FKDVD   81 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHH-hCCCC
Confidence            799999999999999999998874       799999864  3233322222111100000 0111  111222 67899


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC--CCeEEEEc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS--LKRIVLVS  201 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~--~~~iV~iS  201 (250)
                      +||..||....+   ..+..+.++.|..-.+.+.+.++ ..  ...++.+|
T Consensus        82 vVVitAG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        82 AALLVGAFPRKP---GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            999999986433   22334456788888888888774 33  34556655

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.39  E-value=0.0005  Score=63.42  Aligned_cols=72  Identities=15%  Similarity=0.248  Sum_probs=52.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.+|+++|+|+ ||+|++++..|.+.|++|++.+|+.++.+++.+...   ...  .+..+   +..  +.+.|+|||+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~---~~~--~~~~~---~~~--l~~~DiVIna  397 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ---GKA--FPLES---LPE--LHRIDIIINC  397 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---cce--echhH---hcc--cCCCCEEEEc
Confidence            356789999995 899999999999999999999999888776654321   111  22222   221  3578999998


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ...
T Consensus       398 tP~  400 (477)
T PRK09310        398 LPP  400 (477)
T ss_pred             CCC
Confidence            754

>PRK05442 malate dehydrogenase; Provisional

Probab=97.38  E-value=0.00047  Score=60.47  Aligned_cols=114  Identities=14%  Similarity=0.114  Sum_probs=70.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecChh--hHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~~--~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~  152 (250)
                      ++|.|+||+|.+|..++..|+..|.       ++++++++++  +++....++.+...... ...++. +. .+. +.+.
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~-y~~-~~da   81 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-DP-NVA-FKDA   81 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-Ch-HHH-hCCC
Confidence            5899999999999999999988764       6899998543  23322211111100000 011221 11 222 6789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C--CCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~--~~~iV~iSS  202 (250)
                      |+||-+||....+   ..+..+..+.|..-.+.+.+.+++ .  ...+|.+|.
T Consensus        82 DiVVitaG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         82 DVALLVGARPRGP---GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             CEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            9999999975433   223444567888888888887743 2  456666664

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.37  E-value=0.00088  Score=57.76  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh---hhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---EKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~---~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ..+|+++|.|| ||.+++++..|+..|. +|+++.|++   ++.+.+.+.+.. ........++.+.+.+.+. ..+.|+
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~-~~~aDi  199 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA-LASADI  199 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhh-cccCCE
Confidence            56789999995 7779999999999997 799999984   466666554321 1111111222222223332 467899


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      |||+...
T Consensus       200 vINaTp~  206 (288)
T PRK12749        200 LTNGTKV  206 (288)
T ss_pred             EEECCCC
Confidence            9997644

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.37  E-value=0.00046  Score=59.35  Aligned_cols=78  Identities=18%  Similarity=0.265  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..+|+++|.|| ||.|++++..|++.|. +|+++.|+.++.+++.+.+.. .+...+.  ..+..++.+. ....|+|||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~-~~~~divIN  200 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDV-IAAADGVVN  200 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHH-HhhcCEEEE
Confidence            45789999995 9999999999999997 699999999998887654321 1111111  1122222222 356899998


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +...
T Consensus       201 aTp~  204 (283)
T PRK14027        201 ATPM  204 (283)
T ss_pred             cCCC
Confidence            8754

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.37  E-value=0.00046  Score=60.52  Aligned_cols=76  Identities=25%  Similarity=0.208  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      .+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.+.+   ++.. ..|..+.+++.+.+    -+++|+++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-vi~~~~~~~~~~~i~~~~~~gvd~v~  226 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-AFNYKEEPDLDAALKRYFPNGIDIYF  226 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-eEEcCCcccHHHHHHHhCCCCcEEEE
Confidence            5789999999999999999888888999999999988877665422   2221 12322222222111    24689999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      ++.|
T Consensus       227 d~~g  230 (338)
T cd08295         227 DNVG  230 (338)
T ss_pred             ECCC
Confidence            9876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.36  E-value=0.001  Score=58.01  Aligned_cols=113  Identities=22%  Similarity=0.240  Sum_probs=69.3

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCC--eeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEET--LQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~--~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +|.|+|++|.||..++..|+.+|.  +++++++++.  +....++.+..  ..+ .+ .++.+++.+. +++.|+||..|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a--~g~a~DL~~~~~~~~i-~~-~~~~~~~~~~-~~daDivvita   75 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGA--AGVAADLSHIPTAASV-KG-FSGEEGLENA-LKGADVVVIPA   75 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCC--cEEEchhhcCCcCceE-EE-ecCCCchHHH-cCCCCEEEEeC
Confidence            488999999999999999998875  7999998762  21111111111  111 11 0111223333 68999999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVG  204 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~  204 (250)
                      |....+.+   ...+..+.|..-.+.+.+.+. .+ ...+|.+|-..
T Consensus        76 G~~~~~g~---~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        76 GVPRKPGM---TRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCCCCCCc---cHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence            98653322   233455778888888877763 33 34566666543

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.36  E-value=0.00079  Score=59.39  Aligned_cols=78  Identities=23%  Similarity=0.339  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh---------------------hHhhhhCcCC--CC--Cee
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTLFGKQD--EE--TLQ  132 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~---------------------~~~~~~~~~~--~~--~~~  132 (250)
                      .++.++|+|.|+ ||+|.+++..|++.|. ++++++++.-                     +.+.+.+.+.  .+  .++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            356678999996 9999999999999998 8999998631                     1111111111  22  345


Q ss_pred             EEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619          133 VCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       133 ~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+..|+++ +.+.+ ++.+.|+||.+.
T Consensus       100 ~~~~~~~~-~~~~~-~~~~~DlVid~~  124 (339)
T PRK07688        100 AIVQDVTA-EELEE-LVTGVDLIIDAT  124 (339)
T ss_pred             EEeccCCH-HHHHH-HHcCCCEEEEcC
Confidence            55566654 33443 367899999874

>PLN02602 lactate dehydrogenase

Probab=97.36  E-value=0.00085  Score=59.37  Aligned_cols=113  Identities=18%  Similarity=0.257  Sum_probs=70.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|+|+ |.||..++..|+..|.  ++++++.++++++....++.+... +. ...+....+.+  .+++.|+||-.|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~-~~~~~~i~~~~dy~--~~~daDiVVitA  113 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAA-FLPRTKILASTDYA--VTAGSDLCIVTA  113 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhh-cCCCCEEEeCCCHH--HhCCCCEEEECC
Confidence            69999996 9999999999998875  699999988766554332221100 00 01221111222  257899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      |....+.   .+..+....|..-.+.+.+.++ .+ ...+|++|-
T Consensus       114 G~~~k~g---~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        114 GARQIPG---ESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9865332   1223445667777777777663 22 345666663

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.33  E-value=0.00046  Score=65.00  Aligned_cols=72  Identities=18%  Similarity=0.263  Sum_probs=60.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+++|.| .|-+|++++++|.++|++|++++.|+++.+.+.+    .+...+.+|.+|++.++++-.++.|.++-+.
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            4688887 6999999999999999999999999998877653    3688999999999988875466889877653

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.27  E-value=0.0013  Score=57.24  Aligned_cols=75  Identities=20%  Similarity=0.188  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~-~~~D~vi  156 (250)
                      .+.+|||+||+|++|..+++.+...|++|+++++++++.+.+.+ +   ++.. ..|..+.+.+.+.+   . +++|+++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~~~~~~gvdvv~  212 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-L---GFDV-AFNYKTVKSLEETLKKASPDGYDCYF  212 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence            46799999999999999998888889999999999888776543 2   2221 12333322232211   2 3689999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      .+.|
T Consensus       213 d~~G  216 (325)
T TIGR02825       213 DNVG  216 (325)
T ss_pred             ECCC
Confidence            9876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.26  E-value=0.0073  Score=52.07  Aligned_cols=162  Identities=12%  Similarity=0.144  Sum_probs=94.3

Q ss_pred             CEEEEEcC-CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC---
Q 025619           83 KLVLVAGG-SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV---  152 (250)
Q Consensus        83 k~vlVTGa-sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~---  152 (250)
                      .+|+|.|. +-=|++.+|.-|-++|+-|+++..+.+..+.+..+. ...+.....|..|+.++..++      +...   
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            47999995 799999999999999999999999988776665443 445777778887777766543      2211   


Q ss_pred             -----cEEEEcCcCCCcCCCCC-----CC-----CCCcceehHHHHHHHHHH----ccC---CCCeEEEEc-cCcccccC
Q 025619          153 -----THVICCTGTTAFPSRRW-----DG-----DNTPEKVDWEGVRNLVSA----LPS---SLKRIVLVS-SVGVTKFN  209 (250)
Q Consensus       153 -----D~vi~~Ag~~~~~~~~~-----~~-----~~~~~~~N~~g~~~l~~a----~~~---~~~~iV~iS-S~~~~~~~  209 (250)
                           -+..+..|+...|...+     +.     ..+.++.|+.-...++++    ++.   ...++|.+. |+...-  
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl--  160 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSL--  160 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhcc--
Confidence                 11223333222122111     00     111223445444444443    343   445666655 432221  


Q ss_pred             CCCcchhhHH---HHHHHHHHHHHHHHhcCCCEEEEecceE
Q 025619          210 ELPWSIMNLF---GVLKYKKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       210 ~~~~~~~~~y---~~~k~k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      +.|+.....-   +.......+.++++..+|+|+.++.|.+
T Consensus       161 ~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l  201 (299)
T PF08643_consen  161 NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNL  201 (299)
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeee
Confidence            1233222211   2333345566788888999999999876

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.26  E-value=0.00042  Score=62.96  Aligned_cols=114  Identities=11%  Similarity=0.051  Sum_probs=66.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC---CC----eEEEEec--ChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR---NI----KSRLLLR--DPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~---G~----~V~~~~R--~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~  152 (250)
                      -+|+||||+|.||.++.-.+++-   |.    .+++++.  +.++++...-++...-.... ...+++ +. .++ +.++
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~~-~ea-~~da  200 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-DL-DVA-FKDA  200 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-CC-HHH-hCCC
Confidence            47999999999999999999873   42    3666777  45555443222211100000 012221 12 223 7899


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC--CeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL--KRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~--~~iV~iSS  202 (250)
                      |++|..||....+.+   ...+..+.|..-.+.+.+++. ...  .+|+.+.|
T Consensus       201 DvvIitag~prk~G~---~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         201 HVIVLLDDFLIKEGE---DLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CEEEECCCCCCCcCC---CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            999999997643322   333455778887777777773 222  45555554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.24  E-value=0.0011  Score=58.54  Aligned_cols=102  Identities=16%  Similarity=0.063  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +++|.|.||||.+|+++++.|.++ +++++++.++.+..+.+.+..  +.+..+ ..++.+.+..   ...++|+||.+.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~--~~~~~~~~~~~~~~~~~---~~~~vD~Vf~al   76 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVH--PHLRGLVDLVLEPLDPE---ILAGADVVFLAL   76 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhC--cccccccCceeecCCHH---HhcCCCEEEECC
Confidence            368999999999999999999987 678877766443322222211  111111 1233333222   246799999876


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      ...                   ....++..+.+...++|=.|+..-..
T Consensus        77 P~~-------------------~~~~~v~~a~~aG~~VID~S~~fR~~  105 (343)
T PRK00436         77 PHG-------------------VSMDLAPQLLEAGVKVIDLSADFRLK  105 (343)
T ss_pred             CcH-------------------HHHHHHHHHHhCCCEEEECCcccCCC
Confidence            321                   12334444422335788888776553

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.24  E-value=0.0014  Score=56.70  Aligned_cols=70  Identities=14%  Similarity=0.117  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+++++|.|. |.+|+.+++.|.+.|++|++++|++++.+...+    .+.+.+  +   .+++.+. +.+.|+||++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~----~G~~~~--~---~~~l~~~-l~~aDiVI~t  217 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE----MGLSPF--H---LSELAEE-VGKIDIIFNT  217 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCeee--c---HHHHHHH-hCCCCEEEEC
Confidence            356899999996 889999999999999999999999876554332    122222  2   2334433 5789999997


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      +
T Consensus       218 ~  218 (296)
T PRK08306        218 I  218 (296)
T ss_pred             C
Confidence            5

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.22  E-value=0.00086  Score=58.78  Aligned_cols=74  Identities=18%  Similarity=0.143  Sum_probs=50.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---CcchhhhCCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~~~~D~vi~~  158 (250)
                      ++|||+||+|++|..+++.+...|+ +|+++++++++.+.+.+.+.   +.. ..|..+.+   .+.+..-+++|+++.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---a~~-vi~~~~~~~~~~i~~~~~~gvd~vid~  231 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---FDA-AINYKTDNVAERLRELCPEGVDVYFDN  231 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---CcE-EEECCCCCHHHHHHHHCCCCceEEEEC
Confidence            7999999999999999988778898 79999999888766544332   221 12333221   1222111369999998


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      +|
T Consensus       232 ~g  233 (345)
T cd08293         232 VG  233 (345)
T ss_pred             CC
Confidence            76

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.22  E-value=0.001  Score=57.71  Aligned_cols=74  Identities=27%  Similarity=0.338  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+.+++|+||+|.+|.++++.+...|.+|+++++++++.+.+.+. .  .-.++  |..+ .+.+.+  ..++|++++++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-~--~~~~~--~~~~~~~~~~~--~~~~d~v~~~~  234 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKEL-G--ADYVI--DGSKFSEDVKK--LGGADVVIELV  234 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc-C--CcEEE--ecHHHHHHHHh--ccCCCEEEECC
Confidence            467899999999999999999999999999999988776655321 1  11112  2222 112222  24799999998


Q ss_pred             cC
Q 025619          160 GT  161 (250)
Q Consensus       160 g~  161 (250)
                      |.
T Consensus       235 g~  236 (332)
T cd08259         235 GS  236 (332)
T ss_pred             Ch
Confidence            63

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.21  E-value=0.00084  Score=61.06  Aligned_cols=73  Identities=30%  Similarity=0.358  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+++|+|.|+ |.+|..+++.|...|+ +|++++|++++.+.+.+.+.   ...+  +   .+++.+. +.+.|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~~~~--~---~~~~~~~-l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---GEAI--P---LDELPEA-LAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---CcEe--e---HHHHHHH-hccCCEEEEC
Confidence            56789999986 9999999999999997 79999999988776655432   1111  2   2333433 5678999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .+..
T Consensus       250 T~s~  253 (423)
T PRK00045        250 TGAP  253 (423)
T ss_pred             CCCC
Confidence            7643

>PLN00203 glutamyl-tRNA reductase

Probab=97.21  E-value=0.001  Score=61.84  Aligned_cols=76  Identities=22%  Similarity=0.297  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+++|+|.|+ |.+|..+++.|...|+ +|+++.|+.++.+.+.+.+.  +..+...+   .+++.++ ..+.|+||.+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~~~---~~dl~~a-l~~aDVVIsA  336 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIYKP---LDEMLAC-AAEADVVFTS  336 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEeec---HhhHHHH-HhcCCEEEEc
Confidence            67889999997 9999999999999997 69999999998887765442  22211122   2334433 5789999988


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .+..
T Consensus       337 T~s~  340 (519)
T PLN00203        337 TSSE  340 (519)
T ss_pred             cCCC
Confidence            7543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.21  E-value=0.00052  Score=54.90  Aligned_cols=70  Identities=17%  Similarity=0.081  Sum_probs=48.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..+.+|+|.|.| .|.||+++++.|..-|.+|+..+|.........+    ..+        ...++++. +.+.|+|++
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~----~~~--------~~~~l~el-l~~aDiv~~   97 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE----FGV--------EYVSLDEL-LAQADIVSL   97 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH----TTE--------EESSHHHH-HHH-SEEEE
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc----ccc--------eeeehhhh-cchhhhhhh
Confidence            367899999998 6999999999999999999999999875441111    111        12345543 677899888


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +.-.
T Consensus        98 ~~pl  101 (178)
T PF02826_consen   98 HLPL  101 (178)
T ss_dssp             -SSS
T ss_pred             hhcc
Confidence            7654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.20  E-value=0.00078  Score=59.57  Aligned_cols=76  Identities=25%  Similarity=0.205  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      .+.+|||+||+|++|..+++.+...|++|+++++++++.+.+.+.+   ++.. ..|..+.+++.+.+    -+++|+++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~-vi~~~~~~~~~~~i~~~~~~gvD~v~  233 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE-AFNYKEEPDLDAALKRYFPEGIDIYF  233 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE-EEECCCcccHHHHHHHHCCCCcEEEE
Confidence            4789999999999999999888888999999999888876554222   1211 12333222222211    23689999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      .+.|
T Consensus       234 d~vG  237 (348)
T PLN03154        234 DNVG  237 (348)
T ss_pred             ECCC
Confidence            9876

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.20  E-value=0.0026  Score=51.95  Aligned_cols=36  Identities=22%  Similarity=0.332  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      .+..++|+|.| .||+|.++++.|+..|. ++++++++
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            35667899999 79999999999999997 79999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.19  E-value=0.0068  Score=47.64  Aligned_cols=65  Identities=23%  Similarity=0.263  Sum_probs=46.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |++|-+.| .|-+|+.+++.|+++|++|.+.+|++++.+++.+.    +++  .+     ++..++ ..++|+|+-+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----g~~--~~-----~s~~e~-~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA----GAE--VA-----DSPAEA-AEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT----TEE--EE-----SSHHHH-HHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh----hhh--hh-----hhhhhH-hhcccceEeec
Confidence            46889999 59999999999999999999999999998877642    221  12     234433 45679999875

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.18  E-value=0.0017  Score=55.68  Aligned_cols=76  Identities=24%  Similarity=0.176  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hh-hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AI-FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~-~~~~D~vi  156 (250)
                      .+++++|+|++|++|.++++.+...|.+|+++++++++.+.+.+ .   ++.. ..|..+.+..+.   .. -+++|.++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A---GADA-VFNYRAEDLADRILAATAGQGVDVII  218 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE-EEeCCCcCHHHHHHHHcCCCceEEEE
Confidence            46899999999999999999999999999999998887766542 2   2221 234444333222   11 13699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      ++++.
T Consensus       219 ~~~~~  223 (325)
T cd08253         219 EVLAN  223 (325)
T ss_pred             ECCch
Confidence            98863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.18  E-value=0.0018  Score=55.40  Aligned_cols=108  Identities=19%  Similarity=0.217  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc---cCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---KDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~---~~~~~~~~~~~D~vi~  157 (250)
                      .|.+|+|+||+|.+|+-+.+--.-.|++|+.++-.++|.+-+.+++.-..    ..|..++   +.++++.-+++|+.|-
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~----~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA----GIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce----eeecCcccHHHHHHHHCCCCeEEEEE
Confidence            58899999999999987666444569999999999999888776543211    2344333   2333333458999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCCC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~~  212 (250)
                      |.|-...                   ..+++.+. -..||+..+-++.|+.+..|
T Consensus       226 NVGg~v~-------------------DAv~~~ln-~~aRi~~CG~IS~YN~~~~~  260 (340)
T COG2130         226 NVGGEVL-------------------DAVLPLLN-LFARIPVCGAISQYNAPELP  260 (340)
T ss_pred             cCCchHH-------------------HHHHHhhc-cccceeeeeehhhcCCCCCC
Confidence            9884321                   11222222 23689999999988765444

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.17  E-value=0.0012  Score=57.37  Aligned_cols=75  Identities=20%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---CcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~~~~D~vi~  157 (250)
                      .+.+|||+||+|++|..+++.+...|++|+++++++++.+.+.+ +   ++.. ..|..+.+   .+.+..-+++|+++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~~-vi~~~~~~~~~~v~~~~~~gvd~vld  217 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFDA-VFNYKTVSLEEALKEAAPDGIDCYFD  217 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE-EEeCCCccHHHHHHHHCCCCcEEEEE
Confidence            46799999999999999998888899999999999888776654 2   2221 12333322   122211236899998


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      +.|
T Consensus       218 ~~g  220 (329)
T cd08294         218 NVG  220 (329)
T ss_pred             CCC
Confidence            876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.14  E-value=0.00071  Score=57.53  Aligned_cols=113  Identities=21%  Similarity=0.192  Sum_probs=69.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC----CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |.|.||+|.+|..++..|+..|    .+|+++++++++++....++...........++-.++..++ +.+.|+||..+|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~-~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEA-FKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHH-hCCCCEEEECCC
Confidence            4689999999999999999998    68999999887765543332210000011222222334444 688999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccC--CCCeEEEEc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS  201 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~iV~iS  201 (250)
                      ....+.+   ........|..-.+.+.+.+++  ....++++|
T Consensus        80 ~~~~~g~---~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          80 VGRKPGM---GRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCcCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            7653311   1122335577667777776632  233555555

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.13  E-value=0.0019  Score=56.25  Aligned_cols=38  Identities=24%  Similarity=0.302  Sum_probs=34.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      ++|.|.| +|.+|..++..|+++|++|++.+|+++..+.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~   40 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA   40 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence            4799999 8999999999999999999999999876554

>PLN02928 oxidoreductase family protein

Probab=97.12  E-value=0.0021  Score=56.95  Aligned_cols=82  Identities=15%  Similarity=0.056  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|++.|.| .|.||+++++.|...|.+|++.+|+..........+....+..+........+++++ +.+.|+|+.+
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~el-l~~aDiVvl~  233 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEF-AGEADIVVLC  233 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHH-HhhCCEEEEC
Confidence            57899999999 599999999999999999999998743211100000001111111111134466654 7889999988


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .-..
T Consensus       234 lPlt  237 (347)
T PLN02928        234 CTLT  237 (347)
T ss_pred             CCCC
Confidence            7543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.12  E-value=0.0012  Score=57.53  Aligned_cols=73  Identities=25%  Similarity=0.307  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+++|+|.|+ |.||..+++.|...| .+|++++|++++.+++.+.+..   ..+  +   .+++.+. ..+.|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~--~---~~~~~~~-l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV--P---LDELLEL-LNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE--e---HHHHHHH-HhcCCEEEEC
Confidence            46789999996 999999999999876 5799999999887776654421   222  2   2234433 5678999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .+..
T Consensus       246 t~~~  249 (311)
T cd05213         246 TGAP  249 (311)
T ss_pred             CCCC
Confidence            8743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.10  E-value=0.0068  Score=50.56  Aligned_cols=35  Identities=31%  Similarity=0.397  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      ++.++|+|.| .||+|+++++.|++.|. ++++++.+
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4567899998 79999999999999997 78888765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK04148 hypothetical protein; Provisional

Probab=97.09  E-value=0.0016  Score=49.39  Aligned_cols=69  Identities=13%  Similarity=0.082  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +++++++.|..  -|.++++.|.+.|++|++++.+++..+...+    ..++++.+|+.+++- .  ++++.|.++..
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~~~~~v~dDlf~p~~-~--~y~~a~liysi   84 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----LGLNAFVDDLFNPNL-E--IYKNAKLIYSI   84 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----hCCeEEECcCCCCCH-H--HHhcCCEEEEe
Confidence            44689999954  8888999999999999999999987766543    357889999998652 2  36778888754

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.07  E-value=0.0087  Score=50.97  Aligned_cols=36  Identities=28%  Similarity=0.366  Sum_probs=31.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      .++.++|+|.| .||+|.++++.|++.|. ++++++.+
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45677899998 69999999999999994 78888865

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.07  E-value=0.0013  Score=57.37  Aligned_cols=113  Identities=17%  Similarity=0.140  Sum_probs=68.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCC-eeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~-~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|+|+ |.||..++..|+..|.  +++++++++++++....++.+.. +... ..+....+.+ . +.+.|+||.+|
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~-~~v~~~~dy~-~-~~~adivvita   79 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKN-PKIEADKDYS-V-TANSKVVIVTA   79 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCC-CEEEECCCHH-H-hCCCCEEEECC
Confidence            38999996 9999999999998874  69999998776554332221110 0000 0111111222 2 57899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      |....+.   ....+.++.|..-.+.+.+.++ .+ .+.++++|-
T Consensus        80 G~~~k~g---~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          80 GARQNEG---ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            9865332   2233455678777777777663 22 345666663

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.06  E-value=0.0014  Score=59.65  Aligned_cols=114  Identities=13%  Similarity=0.082  Sum_probs=74.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEecChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-------NI--KSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-------G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~  152 (250)
                      -+|.|+|++|.||.+++..|+..       |.  +++++++++++++...-++.+.-.... ...++. ++.+ . +++.
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~ye-~-~kda  177 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DPYE-V-FQDA  177 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CCHH-H-hCcC
Confidence            37999999999999999999988       65  799999998877665433321110000 011111 1222 2 6889


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC--C-CCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--S-LKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~-~~~iV~iSS  202 (250)
                      |+||..||....+.   .+..+..+.|..-.+.+.+.+.+  + ...+|.+|-
T Consensus       178 DiVVitAG~prkpG---~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        178 EWALLIGAKPRGPG---MERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            99999999864332   23344567888888888887743  3 345666663

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.05  E-value=0.002  Score=55.93  Aligned_cols=114  Identities=12%  Similarity=0.159  Sum_probs=64.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCC-CeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~-~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +++|.|.|| |.+|..++..++..|. +|++++++++.++....++... ........++...+.+ . +.+.|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~-~-~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE-D-IAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH-H-HCCCCEEEECC
Confidence            368999998 9999999999999875 8999999887654432111110 0000001111112233 3 57899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVS  201 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iS  201 (250)
                      |....+..   ...+...-|..-...+++.+. .. ...+|++|
T Consensus        79 ~~p~~~~~---~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         79 GVPRKPGM---SRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCcCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            86542211   111222346665666666553 22 23455554

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.03  E-value=0.0016  Score=59.16  Aligned_cols=73  Identities=27%  Similarity=0.343  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+++|+|.|+ |.+|..+++.|...| .+|++++|+.++.+++.+.+..   ..+  +.   +++.++ +.+.|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i--~~---~~l~~~-l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAV--KF---EDLEEY-LAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEe--eH---HHHHHH-HhhCCEEEEC
Confidence            56789999996 999999999999999 6899999999887766543321   122  21   234433 5689999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .+..
T Consensus       248 T~s~  251 (417)
T TIGR01035       248 TGAP  251 (417)
T ss_pred             CCCC
Confidence            7643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.01  E-value=0.012  Score=54.71  Aligned_cols=106  Identities=17%  Similarity=0.134  Sum_probs=69.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc------------Cc---
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------------DL---  144 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~------------~~---  144 (250)
                      ..+.+|+|+| .|.+|...+..+...|++|+++++++++++...+ +   +.+++..|..+.+            +.   
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFLELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEEeccccccccccchhhhcchhHHHH
Confidence            3578999999 6999999999999999999999999998876553 2   3444444443221            10   


Q ss_pred             -chhh---hCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          145 -DPAI---FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       145 -~~~~---~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                       .+.+   .+++|+||.+++....+.     +.       .-+...++.+++| ++||.++..
T Consensus       238 ~~~~~~~~~~gaDVVIetag~pg~~a-----P~-------lit~~~v~~mkpG-gvIVdvg~~  287 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIPGKPA-----PK-------LITAEMVASMKPG-SVIVDLAAE  287 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCCcccC-----cc-------hHHHHHHHhcCCC-CEEEEEccC
Confidence             0111   257999999998743110     00       0123455556654 578888764

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.01  E-value=0.0027  Score=54.54  Aligned_cols=39  Identities=21%  Similarity=0.241  Sum_probs=34.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      ++.||+|+|.|++|-+|+.++..|+++|++|+++.|...
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            468999999999999999999999999999999887543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.00  E-value=0.00092  Score=49.91  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=40.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEE-EEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN-IKSR-LLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G-~~V~-~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +|.|.||||.+|+++++.|.++- ++++ +++++.+..+.+..... .....  ...+.+ .+.+ . +.++|+||.+.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~-~~~~-~-~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFE--DLSVED-ADPE-E-LSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTE--EEBEEE-TSGH-H-HTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccc--ceeEee-cchh-H-hhcCCEEEecCc
Confidence            58999999999999999999863 4544 44555523222222111 01111  112222 2222 2 578999999864

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.00  E-value=0.0019  Score=56.48  Aligned_cols=116  Identities=11%  Similarity=0.066  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCC-CeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~-~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.++|.|.|| |.+|..++..++..| .++++++++++.++...-++... ...-....+....+.+ + +.+.|+||.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~-l~~ADiVVit   80 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-D-IKDSDVVVIT   80 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-H-hCCCCEEEEC
Confidence            4568999997 999999999999988 68999999876543321111110 0000001111112333 3 5789999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      +|....+..   ...+....|..-...+.+.+. ... ..+|++|.
T Consensus        81 ag~~~~~g~---~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         81 AGVQRKEEM---TREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            987543221   122233556655555666553 222 23555544

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.00  E-value=0.0036  Score=54.86  Aligned_cols=73  Identities=19%  Similarity=0.202  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .|++|+|+|+. |+|...++.....|++|++++|++++.+...+.    +... ..|-+|++..++ +.+..|+++.+++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~-~i~~~~~~~~~~-~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADH-VINSSDSDALEA-VKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcE-EEEcCCchhhHH-hHhhCcEEEECCC
Confidence            47899999987 999998888777999999999999988765432    2222 233336666654 3345999999987

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.99  E-value=0.0098  Score=54.39  Aligned_cols=36  Identities=17%  Similarity=0.174  Sum_probs=30.0

Q ss_pred             CCEEE----EEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVL----VAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vl----VTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      +..+|    |+||+|++|.++++.|...|++|+...+.+.
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~   73 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGL   73 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence            34555    8888999999999999999999998876554

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.98  E-value=0.0021  Score=61.16  Aligned_cols=72  Identities=21%  Similarity=0.260  Sum_probs=61.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+|+|.| .|-+|+.+++.|.++|+++++++.|+++.+.+.+    .+..++.+|.+|++.++++-.++.|.+|-+.
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            4788888 7999999999999999999999999998887653    3677899999999999875466889888764

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.97  E-value=0.0019  Score=53.38  Aligned_cols=41  Identities=29%  Similarity=0.266  Sum_probs=36.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      |+|.|.||+|.+|..+++.|++.|++|.+.+|++++.+.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~   41 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAA   41 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHH
Confidence            36999999999999999999999999999999988776543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.96  E-value=0.0023  Score=54.08  Aligned_cols=115  Identities=18%  Similarity=0.182  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe---EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~---V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+-+|.|.||+||||+.+... ++....   +.+.+-.  ....+...+.+-+-.......+-+++++++ +.+.|+||-
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLL-lK~np~Vs~LaLYDi~--~~~GVaaDlSHI~T~s~V~g~~g~~~L~~a-l~~advVvI  102 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLL-LKLNPLVSELALYDIA--NTPGVAADLSHINTNSSVVGFTGADGLENA-LKGADVVVI  102 (345)
T ss_pred             CcceEEEEecCCccCccHHHH-HhcCcccceeeeeecc--cCCcccccccccCCCCceeccCChhHHHHH-hcCCCEEEe
Confidence            456899999999999999774 455543   3333332  112222222222222233444445677765 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C-CCeEEEEcc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSS  202 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~-~~~iV~iSS  202 (250)
                      -||+..-|.+.   .++.+++|..-.+.+..++.+ - ...+.++|-
T Consensus       103 PAGVPRKPGMT---RDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  103 PAGVPRKPGMT---RDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             cCCCCCCCCCc---HHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            99998766553   345678888888888877632 2 234444443

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.96  E-value=0.0023  Score=58.71  Aligned_cols=77  Identities=16%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             CCCCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc
Q 025619           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (250)
Q Consensus        79 ~~~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~  142 (250)
                      ++.||+||||+|                ||-+|.+|++++..+|++|+++.-... +.      ...+++++..  ...+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~V--~ta~  323 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIHV--ESAR  323 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEEe--cCHH
Confidence            479999999987                689999999999999999999874321 11      1335555543  4444


Q ss_pred             CcchhhhC--CCcEEEEcCcCCCc
Q 025619          143 DLDPAIFE--GVTHVICCTGTTAF  164 (250)
Q Consensus       143 ~~~~~~~~--~~D~vi~~Ag~~~~  164 (250)
                      ++.+++..  ..|++|++|++..+
T Consensus       324 eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             HHHHHHHhhCCCCEEEEeccccce
Confidence            44444321  37999999998764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.96  E-value=0.0015  Score=57.83  Aligned_cols=78  Identities=26%  Similarity=0.250  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~vi  156 (250)
                      -.++.|||.||+||+|.+.++-....|...+++.++.++.+-+++ +.   . -...|..+++-++...   .+++|+|+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~-lG---A-d~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK-LG---A-DEVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH-cC---C-cEeecCCCHHHHHHHHhhcCCCccEEE
Confidence            367899999999999999999888889555556666665554332 21   1 1235777754444311   23699999


Q ss_pred             EcCcCC
Q 025619          157 CCTGTT  162 (250)
Q Consensus       157 ~~Ag~~  162 (250)
                      .|.|..
T Consensus       231 D~vg~~  236 (347)
T KOG1198|consen  231 DCVGGS  236 (347)
T ss_pred             ECCCCC
Confidence            999864

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.93  E-value=0.0024  Score=60.93  Aligned_cols=73  Identities=30%  Similarity=0.330  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++|+|.| .|-+|+.+++.|.++|.++++++.|+++.+.+.+    .+..++.+|.+|++-++++-.++.|.+|-+.
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            35788888 6999999999999999999999999998887653    3678899999999988865456888888764

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.92  E-value=0.0053  Score=50.16  Aligned_cols=71  Identities=21%  Similarity=0.267  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+|+|.|| |-+|...++.|++.|++|++++++.. .+.++.+   ...+.+..-+      .....+.+.|+||-
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~---~~~i~~~~~~------~~~~~l~~adlVia   76 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE---EGKIRWKQKE------FEPSDIVDAFLVIA   76 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh---CCCEEEEecC------CChhhcCCceEEEE
Confidence            578999999996 99999999999999999999987642 2333322   2234443221      22222456788776


Q ss_pred             cC
Q 025619          158 CT  159 (250)
Q Consensus       158 ~A  159 (250)
                      +.
T Consensus        77 aT   78 (202)
T PRK06718         77 AT   78 (202)
T ss_pred             cC
Confidence            54

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=96.91  E-value=0.0011  Score=54.54  Aligned_cols=150  Identities=19%  Similarity=0.185  Sum_probs=85.4

Q ss_pred             CCCEEEEEcCCChHHHHHHH-----HHHHCC----CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVA-----SLLSRN----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~-----~L~~~G----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~  151 (250)
                      +++..++-+++|.|+..+.-     ++-+-+    |.|+++.|.+.+.+....+++.+++             -    ..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~~~Gi-------------p----~s   73 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELDFPGI-------------P----IS   73 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhcCCCC-------------c----ee
Confidence            45678888999999988876     333334    7899999998765543332222221             1    13


Q ss_pred             CcEEEEcCcCCCc-CCCCCCCCCCcceehHHH-----HHHHHHHcc---CCCCeEEEEccCcccccCCC-Ccchhh---H
Q 025619          152 VTHVICCTGTTAF-PSRRWDGDNTPEKVDWEG-----VRNLVSALP---SSLKRIVLVSSVGVTKFNEL-PWSIMN---L  218 (250)
Q Consensus       152 ~D~vi~~Ag~~~~-~~~~~~~~~~~~~~N~~g-----~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~-~~~~~~---~  218 (250)
                      ||..+|.+|.... |...|.+.   ++-|+.|     +..+.++..   +-.+..|.+|..+.|.+... .|....   .
T Consensus        74 c~a~vna~g~n~l~P~rRWsp~---fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg  150 (315)
T KOG3019|consen   74 CVAGVNAVGNNALLPIRRWSPE---FQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG  150 (315)
T ss_pred             hHHHHhhhhhhccCchhhcCHH---HHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC
Confidence            4444444443322 33456543   2334444     777888873   23457899999988865321 122111   1


Q ss_pred             HH-HHHHHHHHH--HHHHhcCCCEEEEecceEEeC
Q 025619          219 FG-VLKYKKMGE--DFVQKSGLPFTIISLCIYCIL  250 (250)
Q Consensus       219 y~-~~k~k~~~e--~~~~~~gi~~~~vrPg~v~~~  250 (250)
                      +- .+..-.+.|  .......+++++||.|.|.|.
T Consensus       151 fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~  185 (315)
T KOG3019|consen  151 FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGK  185 (315)
T ss_pred             hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEec
Confidence            11 222222333  333445699999999999873

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.91  E-value=0.0054  Score=54.95  Aligned_cols=78  Identities=14%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC-------------------hhhHhhhhCcCC--CCCe--eEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD-------------------PEKATTLFGKQD--EETL--QVCK  135 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~-------------------~~~~~~~~~~~~--~~~~--~~v~  135 (250)
                      ++.++|+|.| +||+|+++++.|++.|. ++++++++                   ..|.+.+.+.+.  .+.+  +.+.
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  211 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ  211 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            5677899997 59999999999999998 69999887                   223333322221  2333  3333


Q ss_pred             eeCCCccCcchhhhCCCcEEEEcCc
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ..+++ +.+.+ ++.+.|+||++..
T Consensus       212 ~~~~~-~~~~~-~~~~~D~Vv~~~d  234 (376)
T PRK08762        212 ERVTS-DNVEA-LLQDVDVVVDGAD  234 (376)
T ss_pred             ccCCh-HHHHH-HHhCCCEEEECCC
Confidence            33332 23443 3678999998763

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.86  E-value=0.002  Score=57.70  Aligned_cols=114  Identities=14%  Similarity=0.121  Sum_probs=70.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-e----EEE--E--ecChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-K----SRL--L--LRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~----V~~--~--~R~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~  152 (250)
                      -+|.|+||+|.+|.+++-.|+..|. .    |.+  +  +++.++++...-++.+.-.... ...++. ++.+ . +++.
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~y~-~-~kda  121 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DPYE-V-FEDA  121 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CCHH-H-hCCC
Confidence            3899999999999999999998874 2    333  3  7777776554332221110000 011111 1222 2 6889


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS  202 (250)
                      |+||..||....+.   ....+.++.|..-.+.+.+.+++   ...++|.+|-
T Consensus       122 DIVVitAG~prkpg---~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       122 DWALLIGAKPRGPG---MERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999999864332   23344557788888888887743   2345666664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.86  E-value=0.0028  Score=56.91  Aligned_cols=75  Identities=28%  Similarity=0.325  Sum_probs=59.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +++++++||.| .|-+|.-++++|.++| .+|+++.|+.++.++++++++        +++...+.+... +...|+||.
T Consensus       175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~--------~~~~~l~el~~~-l~~~DvVis  244 (414)
T COG0373         175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG--------AEAVALEELLEA-LAEADVVIS  244 (414)
T ss_pred             ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC--------CeeecHHHHHHh-hhhCCEEEE
Confidence            36889999999 5899999999999999 579999999999998876653        334444555543 678999999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +.|..+
T Consensus       245 sTsa~~  250 (414)
T COG0373         245 STSAPH  250 (414)
T ss_pred             ecCCCc
Confidence            887654

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.85  E-value=0.0049  Score=54.80  Aligned_cols=78  Identities=14%  Similarity=0.106  Sum_probs=51.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh-------------------hHhhhhCcCC--CC--CeeEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD--EE--TLQVC  134 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~-------------------~~~~~~~~~~--~~--~~~~v  134 (250)
                      .++.++|+|.|+ ||+|.++++.|+..|. ++++++.+.-                   |.+.+++.+.  .+  +++.+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            356679999985 9999999999999997 6888887531                   2222221111  23  34455


Q ss_pred             EeeCCCccCcchhhhCCCcEEEEcC
Q 025619          135 KGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       135 ~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ..+++.. ...+ ++.++|+||.+.
T Consensus       104 ~~~i~~~-~~~~-~~~~~DvVvd~~  126 (355)
T PRK05597        104 VRRLTWS-NALD-ELRDADVILDGS  126 (355)
T ss_pred             EeecCHH-HHHH-HHhCCCEEEECC
Confidence            5566543 3333 368899999876

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.84  E-value=0.0052  Score=54.07  Aligned_cols=74  Identities=20%  Similarity=0.142  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~  157 (250)
                      .+++|+|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+. ++.+..  .+++|++|.
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-l---Ga~~-vi~~~~~-~~~~~~~~~g~~D~vid  241 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-M---GADK-LVNPQND-DLDHYKAEKGYFDVSFE  241 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-c---CCcE-EecCCcc-cHHHHhccCCCCCEEEE
Confidence            5789999986 9999999988888898 58889999888776543 2   2221 1233332 222211  235899999


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      ++|.
T Consensus       242 ~~G~  245 (343)
T PRK09880        242 VSGH  245 (343)
T ss_pred             CCCC
Confidence            9874

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.83  E-value=0.0046  Score=52.88  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhh-hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI-FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~-~~~~D~vi  156 (250)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ .   ++. ...|..+.+.   +.+.. -+++|.++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  213 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-L---GAD-VAINYRTEDFAEEVKEATGGRGVDVIL  213 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-c---CCC-EEEeCCchhHHHHHHHHhCCCCeEEEE
Confidence            46799999999999999999999999999999998877766532 2   111 1233332221   22111 13699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      +++|.
T Consensus       214 ~~~g~  218 (323)
T cd05276         214 DMVGG  218 (323)
T ss_pred             ECCch
Confidence            99873

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.83  E-value=0.0067  Score=54.01  Aligned_cols=75  Identities=19%  Similarity=0.146  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccC----cchhhhCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKD----LDPAIFEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~----~~~~~~~~~D~  154 (250)
                      .+.+|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+ .++    +.+..-+++|+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~---Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~  258 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-L---GATD-CVNPNDYDKPIQEVIVEITDGGVDY  258 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h---CCCe-EEcccccchhHHHHHHHHhCCCCCE
Confidence            4679999985 9999999988888898 79999999888776532 2   2211 223332 112    22221237999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       259 vid~~G~  265 (368)
T TIGR02818       259 SFECIGN  265 (368)
T ss_pred             EEECCCC
Confidence            9999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.0094  Score=47.21  Aligned_cols=42  Identities=29%  Similarity=0.313  Sum_probs=36.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT  120 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~  120 (250)
                      ++.+|+|+|.|+++.+|..+++.|.++|++|+++.|+.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~   82 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK   82 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence            578999999999767899999999999999999999864443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.82  E-value=0.0074  Score=49.67  Aligned_cols=78  Identities=17%  Similarity=0.236  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh---h---------------hHhhhhCcCC----CCCeeEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---E---------------KATTLFGKQD----EETLQVCK  135 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~---~---------------~~~~~~~~~~----~~~~~~v~  135 (250)
                      .+..++|+|.| .||+|..+++.|++.|. ++++++.+.   +               |.+.+.+.+.    ..+++.+.
T Consensus        25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            45677999999 69999999999999997 589888872   1               1222211111    22344455


Q ss_pred             eeCCCccCcchhhhCCCcEEEEcC
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++++ +.+.+ ++.++|+||.+.
T Consensus       104 ~~i~~-~~~~~-~~~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEE-LFKDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHH-HHcCCCEEEECC
Confidence            55554 33433 367899999874

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.81  E-value=0.0033  Score=57.42  Aligned_cols=67  Identities=21%  Similarity=0.279  Sum_probs=47.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+|.|.||+|.+|..+++.|.+.|++|++++|++++..+.....   ++.     .+  .+..+. ..+.|+||.+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~---gv~-----~~--~~~~e~-~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL---GVE-----YA--NDNIDA-AKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc---CCe-----ec--cCHHHH-hccCCEEEEecC
Confidence            37999999999999999999999999999999987754433221   221     11  112222 456788887764

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.81  E-value=0.033  Score=52.11  Aligned_cols=112  Identities=20%  Similarity=0.213  Sum_probs=69.8

Q ss_pred             CCCCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChh--hHhh---hhCcCC--CCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPE--KATT---LFGKQD--EETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~--~~~~---~~~~~~--~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      ...++.+|||||+ |.||.+++..|++.|++|+++..+-+  +.+-   +.....  +..+-++..+..+..++++.+  
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            4578999999987 78999999999999999999866533  2222   211111  234556788888877777543  


Q ss_pred             --------h-------C---CCcEEEEcCcCCCcCCCCCCCC--CCcceehHHHHHHHHHHc
Q 025619          149 --------F-------E---GVTHVICCTGTTAFPSRRWDGD--NTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       149 --------~-------~---~~D~vi~~Ag~~~~~~~~~~~~--~~~~~~N~~g~~~l~~a~  190 (250)
                              +       +   .+|.+|-.|++...........  +..+++-+....+++-.+
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl  534 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGL  534 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHh
Confidence                    0       1   3578888777654322111111  222345555566666655

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=96.79  E-value=0.0039  Score=55.24  Aligned_cols=101  Identities=16%  Similarity=0.104  Sum_probs=57.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE-ecChhhHhhhhCcCCCCCeeEE-EeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~R~~~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|.||||.+|.++++.|.++ +.+++.+ +++.+..+.+.+..  +.+... ..++.+. +.++. ..++|+||.+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~--~~l~~~~~~~~~~~-~~~~~-~~~~DvVf~al   76 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH--PHLRGLVDLNLEPI-DEEEI-AEDADVVFLAL   76 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC--ccccccCCceeecC-CHHHh-hcCCCEEEECC
Confidence            37999999999999999999987 6677743 54432222221111  111111 1122211 22322 35799999987


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~  207 (250)
                      ...                   ....++..+ +.| .++|-.|+..-..
T Consensus        77 P~~-------------------~s~~~~~~~~~~G-~~VIDlS~~fR~~  105 (346)
T TIGR01850        77 PHG-------------------VSAELAPELLAAG-VKVIDLSADFRLK  105 (346)
T ss_pred             Cch-------------------HHHHHHHHHHhCC-CEEEeCChhhhcC
Confidence            432                   233455544 444 6788888876554

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.77  E-value=0.0051  Score=53.89  Aligned_cols=113  Identities=14%  Similarity=0.216  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhh-CcC-----CCCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF-GKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~-~~~-----~~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +.++|.|.| +|.+|..++..++..|. +|++++++++.++... +..     ......+ .. -+   +.+ + +.+.|
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~---d~~-~-l~~aD   76 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TN---NYE-D-IAGSD   76 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CC---CHH-H-hCCCC
Confidence            446899999 59999999999999995 8999999887543211 100     0111111 11 01   233 3 57899


Q ss_pred             EEEEcCcCCCcCCCCCC---CCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWD---GDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~---~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      +||.+||....+.. ++   +..+....|..-.+.+.+.+. ... ..++++|-
T Consensus        77 iVI~tag~~~~~~~-~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         77 VVIVTAGLTKRPGK-SDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEEECCCCCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999998653322 11   112233446665666666553 222 25565554

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.76  E-value=0.0052  Score=52.57  Aligned_cols=66  Identities=21%  Similarity=0.249  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +++++|.| +||.+++++..|++.|. +|+++.|+.++.+++.+.+.        .+..  +.+.   ....|+|||+..
T Consensus       122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~--------~~~~--~~~~---~~~~dlvINaTp  187 (272)
T PRK12550        122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG--------YEWR--PDLG---GIEADILVNVTP  187 (272)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC--------Ccch--hhcc---cccCCEEEECCc
Confidence            46899999 59999999999999997 59999999998888765331        1111  1111   245799999875


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       188 ~  188 (272)
T PRK12550        188 I  188 (272)
T ss_pred             c
Confidence            4

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.76  E-value=0.013  Score=50.63  Aligned_cols=64  Identities=17%  Similarity=0.181  Sum_probs=47.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.    ++..       .++.+++ ..++|+||-+.
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~----g~~~-------~~~~~e~-~~~~d~vi~~v   66 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA----GAET-------ASTAKAV-AEQCDVIITML   66 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCee-------cCCHHHH-HhcCCEEEEeC
Confidence            4788888 69999999999999999999999999887665421    2211       1233333 56789999886

>PLN02740 Alcohol dehydrogenase-like

Probab=96.75  E-value=0.013  Score=52.49  Aligned_cols=75  Identities=20%  Similarity=0.166  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-C----cchhhhCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-D----LDPAIFEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-~----~~~~~~~~~D~  154 (250)
                      .+++|+|.|+ |+||..+++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+.+ +    +.+..-+++|+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~---Ga~~-~i~~~~~~~~~~~~v~~~~~~g~dv  271 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-M---GITD-FINPKDSDKPVHERIREMTGGGVDY  271 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-c---CCcE-EEecccccchHHHHHHHHhCCCCCE
Confidence            5789999985 9999999998888898 69999999888776543 2   2221 22433321 2    22211136999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       272 vid~~G~  278 (381)
T PLN02740        272 SFECAGN  278 (381)
T ss_pred             EEECCCC
Confidence            9999874

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.75  E-value=0.0055  Score=55.54  Aligned_cols=42  Identities=29%  Similarity=0.264  Sum_probs=37.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      .+.+++|+|.|. |.||+.+++.|...|++|+++++++.+..+
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            357899999995 899999999999999999999999876543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.74  E-value=0.0013  Score=65.03  Aligned_cols=125  Identities=18%  Similarity=0.190  Sum_probs=75.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhh--Hhh-hhCcCCCCCee--EEEeeCCCccCcchhh-----hC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEK--ATT-LFGKQDEETLQ--VCKGDTRNPKDLDPAI-----FE  150 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~--~~~-~~~~~~~~~~~--~v~~Dl~d~~~~~~~~-----~~  150 (250)
                      .|..+|+||-||.|.+++..|..+|++ +++++|+.-+  .+. ....++..++.  +-.-|++..+..+..+     ++
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            478999999999999999999999996 7777886432  111 12223233443  2334555555554433     56


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCC---CCcceehHHHHHHHHHHcc---CCCCeEEEEccCccc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGD---NTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVT  206 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~---~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~  206 (250)
                      .+-.+||.|.+......+-+.+   .+.-+.-+.||.++-+.-+   .-.+.||..||....
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscG 1909 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCG 1909 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeeccc
Confidence            7888999998765222111111   2222345566666655442   234678888887654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.74  E-value=0.0044  Score=53.74  Aligned_cols=76  Identities=18%  Similarity=0.146  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~~~~D~vi~  157 (250)
                      .+.+|+|.|++|.+|..+++.+.+.|++|+++++++++.+.+.+.+..  -++  .|..+.+.   +.+..-+++|++++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~--~~~--~~~~~~~~~~~v~~~~~~~~d~vi~  220 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF--DAA--INYKTPDLAEALKEAAPDGIDVYFD  220 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC--ceE--EecCChhHHHHHHHhccCCceEEEE
Confidence            467999999999999999999999999999999988876665432211  111  22222221   22111246899999


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      ++|
T Consensus       221 ~~g  223 (329)
T cd05288         221 NVG  223 (329)
T ss_pred             cch
Confidence            876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.73  E-value=0.0071  Score=50.31  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh-------------------hHhhhhCcCC--CC--CeeEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD--EE--TLQVCK  135 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~-------------------~~~~~~~~~~--~~--~~~~v~  135 (250)
                      ++.++|+|.| .||+|.++++.|++.|. ++++++.+.-                   |.+.+++.+.  .+  +++.+.
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            4567899999 79999999999999997 6777765421                   1121111111  22  344455


Q ss_pred             eeCCCccCcchhhhCCCcEEEEcCc
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++ .+.+.+ ++.++|+||.+..
T Consensus        98 ~~i~-~~~~~~-~~~~~DvVi~~~d  120 (228)
T cd00757          98 ERLD-AENAEE-LIAGYDLVLDCTD  120 (228)
T ss_pred             ceeC-HHHHHH-HHhCCCEEEEcCC
Confidence            5553 233443 3678999998764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.72  E-value=0.01  Score=51.65  Aligned_cols=109  Identities=14%  Similarity=0.181  Sum_probs=69.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-------CCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-------ETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-------~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      +|.|.|+ |.||..++..|+.+|.  ++++++.++++++....++.+       .++.+. .  .|   .+ . +++.|+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~---y~-~-~~~aDi   71 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD---YD-D-CADADI   71 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC---HH-H-hCCCCE
Confidence            4778897 9999999999998885  699999987765443322211       122222 1  12   22 2 678999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iSS  202 (250)
                      ||-.||....+.+.. +..+.++.|..-.+.+.+.+. .+.. .++.+|-
T Consensus        72 vvitaG~~~kpg~tr-~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          72 IVITAGPSIDPGNTD-DRLDLAQTNAKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             EEECCCCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999999865332210 024455778888888888773 3433 4454443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.72  E-value=0.024  Score=52.53  Aligned_cols=107  Identities=16%  Similarity=0.119  Sum_probs=69.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-------------cC---
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-------------KD---  143 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-------------~~---  143 (250)
                      ..+.+++|.| .|.+|...+..+...|++|+++++++++++.... +   +.+++..|..+.             +.   
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEeccccccccccccceeecCHHHHHH
Confidence            3457999999 5999999999999999999999999988765543 2   345555554221             10   


Q ss_pred             ----cchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          144 ----LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       144 ----~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                          +.+. .++.|++|+++-+...+     .+ .      .-+...++.+++| ..||-+++..+
T Consensus       237 ~~~~~~e~-~~~~DIVI~TalipG~~-----aP-~------Lit~emv~~MKpG-svIVDlA~d~G  288 (511)
T TIGR00561       237 EMELFAAQ-AKEVDIIITTALIPGKP-----AP-K------LITEEMVDSMKAG-SVIVDLAAEQG  288 (511)
T ss_pred             HHHHHHHH-hCCCCEEEECcccCCCC-----CC-e------eehHHHHhhCCCC-CEEEEeeeCCC
Confidence                1111 46799999998543311     01 0      1134456666666 56777776544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.72  E-value=0.012  Score=53.35  Aligned_cols=41  Identities=20%  Similarity=0.139  Sum_probs=36.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .++|.|.| .|.+|..++..|+++|++|+++++++++.+.+.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~   43 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTIN   43 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            36789997 699999999999999999999999999887754

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.71  E-value=0.014  Score=51.04  Aligned_cols=68  Identities=16%  Similarity=0.140  Sum_probs=49.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.| .|.||+.+++.|...|++|++.+|..+...         ++...    ...++++++ +.+.|+|+.+
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~----~~~~~l~e~-l~~aDvvv~~  197 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSF----AGREELSAF-LSQTRVLINL  197 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------Cceee----cccccHHHH-HhcCCEEEEC
Confidence            57899999998 899999999999999999999988653311         11111    123456654 6888998887


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ...
T Consensus       198 lPl  200 (312)
T PRK15469        198 LPN  200 (312)
T ss_pred             CCC
Confidence            643

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.71  E-value=0.015  Score=48.59  Aligned_cols=75  Identities=15%  Similarity=0.229  Sum_probs=48.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh-------------------HhhhhCcC----CCCCeeEEEeeCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK-------------------ATTLFGKQ----DEETLQVCKGDTR  139 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~-------------------~~~~~~~~----~~~~~~~v~~Dl~  139 (250)
                      +|+|.| .||+|.++++.|+..|. ++++++.+.-.                   .+.+.+.+    ...+++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            478888 79999999999999997 68888875311                   11111111    1223455666776


Q ss_pred             CccCcchhhhCCCcEEEEcC
Q 025619          140 NPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       140 d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.++....+++++|+||.+.
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~   99 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNAL   99 (234)
T ss_pred             hhhhchHHHHhCCCEEEECC
Confidence            54444434578899999864

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.71  E-value=0.0061  Score=53.09  Aligned_cols=106  Identities=17%  Similarity=0.176  Sum_probs=65.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +|.|.|+ |.+|..++..|+.+|  .+|+++++++++.+.....+.+     ....+ ..     .+.+ . +.+.|++|
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i-~~-----~d~~-~-l~~aDiVi   72 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRI-YA-----GDYA-D-CKGADVVV   72 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEE-ee-----CCHH-H-hCCCCEEE
Confidence            6899997 999999999999999  5899999998766532111111     11111 11     1222 2 57899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVS  201 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iS  201 (250)
                      .+++....+..   ...+....|..-...+.+.++ .+ .+.++.++
T Consensus        73 ita~~~~~~~~---~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGE---TRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99987543221   222334557777777776653 22 24455554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=96.69  E-value=0.0037  Score=55.17  Aligned_cols=68  Identities=24%  Similarity=0.357  Sum_probs=41.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeE---EEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKS---RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V---~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +|.|.||||++|.++++.|.++|+.+   ..++++.+..+.+.    ..+......|+..    . . +.++|++|.++|
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~----~~~~~~~~~~~~~----~-~-~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT----FKGKELEVNEAKI----E-S-FEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee----eCCeeEEEEeCCh----H-H-hcCCCEEEECCC
Confidence            48999999999999999999988753   34445543322221    1123444555531    1 1 345666666555


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus        71 ~   71 (339)
T TIGR01296        71 G   71 (339)
T ss_pred             H
Confidence            3

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.69  E-value=0.0032  Score=55.46  Aligned_cols=26  Identities=31%  Similarity=0.460  Sum_probs=23.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCe
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIK  108 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~  108 (250)
                      .+|.|+||||.+|.++++.|.++++.
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP   30 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFP   30 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCC
Confidence            58999999999999999999987763

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.68  E-value=0.0048  Score=50.26  Aligned_cols=40  Identities=10%  Similarity=0.135  Sum_probs=30.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLF  123 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~  123 (250)
                      |++.| ||+|-||..++++|++.|++|++..|+. ++.+.+.
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a   42 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAA   42 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHH
Confidence            44555 6699999999999999999999986654 4444443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.66  E-value=0.0068  Score=55.97  Aligned_cols=77  Identities=18%  Similarity=0.143  Sum_probs=51.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+.+++|+|.|+ |++|.++++.|.++|++|++++++.. ....+.+.+...++++..++-..       ....+|.||.
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~~D~Vv~   84 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPEDTDLVVT   84 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCCCCEEEE
Confidence            356789999995 88999999999999999999986542 22222222223356555443211       1346899999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      ..|+..
T Consensus        85 s~Gi~~   90 (480)
T PRK01438         85 SPGWRP   90 (480)
T ss_pred             CCCcCC
Confidence            888753

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.65  E-value=0.0091  Score=52.73  Aligned_cols=73  Identities=21%  Similarity=0.241  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec---ChhhHhhhhCcCCCCCeeEEEeeCCCccCcch-hhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---DPEKATTLFGKQDEETLQVCKGDTRNPKDLDP-AIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R---~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~~D~vi  156 (250)
                      .+++|+|+|+ |++|...++.+...|++|++++|   ++++.+.+. ++   ++..  .|..+. ++.+ ...+++|++|
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~---Ga~~--v~~~~~-~~~~~~~~~~~d~vi  243 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-EL---GATY--VNSSKT-PVAEVKLVGEFDLII  243 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc---CCEE--ecCCcc-chhhhhhcCCCCEEE
Confidence            5679999985 99999999888888999999998   455655433 22   2332  233322 1111 1135789999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .++|.
T Consensus       244 d~~g~  248 (355)
T cd08230         244 EATGV  248 (355)
T ss_pred             ECcCC
Confidence            99873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.65  E-value=0.023  Score=43.51  Aligned_cols=31  Identities=32%  Similarity=0.459  Sum_probs=27.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      +|+|.|+ |++|.++++.|++.|. ++++++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788885 9999999999999998 68888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.64  E-value=0.005  Score=46.77  Aligned_cols=104  Identities=18%  Similarity=0.200  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh-------------------HhhhhCcC----CCCCeeEEEee
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK-------------------ATTLFGKQ----DEETLQVCKGD  137 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~-------------------~~~~~~~~----~~~~~~~v~~D  137 (250)
                      .++|+|.| .|++|+++++.|++.|. ++++++.+.=.                   .+.+++.+    ...+++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            35899988 69999999999999998 68888875311                   11111111    12234555556


Q ss_pred             CCCccCcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       138 l~d~~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                      ++ .+...+. ++++|+||.+...                  ...-..+.+.++.....+|+.+..+.+
T Consensus        81 ~~-~~~~~~~-~~~~d~vi~~~d~------------------~~~~~~l~~~~~~~~~p~i~~~~~g~~  129 (135)
T PF00899_consen   81 ID-EENIEEL-LKDYDIVIDCVDS------------------LAARLLLNEICREYGIPFIDAGVNGFY  129 (135)
T ss_dssp             CS-HHHHHHH-HHTSSEEEEESSS------------------HHHHHHHHHHHHHTT-EEEEEEEETTE
T ss_pred             cc-ccccccc-ccCCCEEEEecCC------------------HHHHHHHHHHHHHcCCCEEEEEeecCE
Confidence            63 3334433 6789999987531                  222334555565444467777665433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.62  E-value=0.0073  Score=52.55  Aligned_cols=114  Identities=17%  Similarity=0.105  Sum_probs=66.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhh-CcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF-GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~-~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|.|.|+ |.+|..++..++.+|. +|++++++++..+... +.............++-..+.++  +.+.|+||-+||
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~--~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD--TANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH--hCCCCEEEEcCC
Confidence            37889996 9999999999999886 8999999765433211 11110000000111211122332  467899999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ....+.   .+..+....|..-...+++.+. .. ...+|.+|.
T Consensus        79 ~p~~~~---~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LPRKPG---MSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            754221   1222344568777777777663 22 345666665

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.61  E-value=0.029  Score=49.87  Aligned_cols=75  Identities=17%  Similarity=0.175  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-Ccchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-~~~~~~----~~~~D~  154 (250)
                      .+.+|||.| +|+||..+++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+.+ ++.+.+    -+++|+
T Consensus       186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-l---Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~  259 (368)
T cd08300         186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-F---GATD-CVNPKDHDKPIQQVLVEMTDGGVDY  259 (368)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-c---CCCE-EEcccccchHHHHHHHHHhCCCCcE
Confidence            478999997 49999999998888999 69999999988775532 2   1211 13333321 222211    236999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.+.|.
T Consensus       260 vid~~g~  266 (368)
T cd08300         260 TFECIGN  266 (368)
T ss_pred             EEECCCC
Confidence            9998763

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.59  E-value=0.0053  Score=53.26  Aligned_cols=110  Identities=17%  Similarity=0.147  Sum_probs=67.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCe--eEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETL--QVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~--~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |.|.|+ |++|..++..|+..|  .+++++++++++++....++.+...  .......+  .+.+ . +.+.|+||.+||
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~-~-l~~aDiVIitag   75 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA-D-AADADIVVITAG   75 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH-H-hCCCCEEEEcCC
Confidence            357785 889999999999998  5799999998876665433221100  00111111  1122 2 688999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ....+.   .+..+....|..-.+.+.+.++ .+ .+.++++|.
T Consensus        76 ~p~~~~---~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          76 APRKPG---ETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            754322   2223344668877777777764 22 345666653

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK06849 hypothetical protein; Provisional

Probab=96.56  E-value=0.0064  Score=54.60  Aligned_cols=38  Identities=13%  Similarity=0.018  Sum_probs=34.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~  118 (250)
                      +.|+|||||++..+|..+++.|.+.|++|++++.++..
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            45799999999999999999999999999999988654

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.56  E-value=0.0072  Score=52.32  Aligned_cols=74  Identities=20%  Similarity=0.184  Sum_probs=50.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC--ccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.+|+|.|++|++|..+++.+...|.+|+++++++++.+.+.+ +   ++..+ .|..+  .+.+.+.--+++|+++++.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~---g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~  221 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-L---GAKEV-IPREELQEESIKPLEKQRWAGAVDPV  221 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-c---CCCEE-EcchhHHHHHHHhhccCCcCEEEECC
Confidence            5799999999999999999888899999999999888776543 2   22111 22222  1222221113589999887


Q ss_pred             c
Q 025619          160 G  160 (250)
Q Consensus       160 g  160 (250)
                      |
T Consensus       222 g  222 (326)
T cd08289         222 G  222 (326)
T ss_pred             c
Confidence            5

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.56  E-value=0.0048  Score=53.12  Aligned_cols=40  Identities=15%  Similarity=0.226  Sum_probs=35.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      ++|.|.|+ |-+|..++..|+++|++|++.+++++.++.+.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~   41 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ   41 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            57899996 99999999999999999999999998876643

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.55  E-value=0.02  Score=48.16  Aligned_cols=36  Identities=28%  Similarity=0.299  Sum_probs=31.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      .++.++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            356789999997 9999999999999997 68888764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.55  E-value=0.011  Score=53.45  Aligned_cols=69  Identities=25%  Similarity=0.230  Sum_probs=49.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.|++|+|.| .|.||+.+++.+...|++|+++++++.+++....    .+++.+  +   .   +++ ..+.|+||.+
T Consensus       199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~----~G~~~~--~---~---~e~-v~~aDVVI~a  264 (413)
T cd00401         199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM----EGYEVM--T---M---EEA-VKEGDIFVTT  264 (413)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh----cCCEEc--c---H---HHH-HcCCCEEEEC
Confidence            35789999999 5799999999999999999999999887665432    122222  1   1   122 4567888877


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      +|.
T Consensus       265 tG~  267 (413)
T cd00401         265 TGN  267 (413)
T ss_pred             CCC
Confidence            764

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=96.54  E-value=0.026  Score=50.09  Aligned_cols=75  Identities=16%  Similarity=0.082  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-----cCcchhhhCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-----KDLDPAIFEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-----~~~~~~~~~~~D~  154 (250)
                      .+.+|+|.| +|.+|..+++.+...|. +|+++++++++.+.+.+ +   ++.. ..|..+.     +.+.+..-+++|+
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~---ga~~-~i~~~~~~~~~~~~~~~~~~~g~d~  257 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-F---GATD-FINPKDSDKPVSEVIREMTGGGVDY  257 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-c---CCCc-EeccccccchHHHHHHHHhCCCCCE
Confidence            467999997 59999999998888898 69999998887765532 2   1211 1222221     1222221246999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.+.|.
T Consensus       258 vid~~g~  264 (365)
T cd08277         258 SFECTGN  264 (365)
T ss_pred             EEECCCC
Confidence            9998763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02827 Alcohol dehydrogenase-like

Probab=96.53  E-value=0.028  Score=50.24  Aligned_cols=75  Identities=19%  Similarity=0.120  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCc----chhhhCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDL----DPAIFEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~----~~~~~~~~D~  154 (250)
                      .+.+|||.|+ |++|..+++.+...|+. |+++++++++.+.+.+ +   ++.. ..|..+. +++    .+..-+++|+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~-l---Ga~~-~i~~~~~~~~~~~~v~~~~~~g~d~  266 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT-F---GVTD-FINPNDLSEPIQQVIKRMTGGGADY  266 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-c---CCcE-EEcccccchHHHHHHHHHhCCCCCE
Confidence            5789999985 99999999888888985 7777888877665432 2   2221 1233321 122    2211236999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       267 vid~~G~  273 (378)
T PLN02827        267 SFECVGD  273 (378)
T ss_pred             EEECCCC
Confidence            9999874

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.53  E-value=0.023  Score=46.19  Aligned_cols=35  Identities=23%  Similarity=0.353  Sum_probs=28.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      ++..+|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            35568999985 5599999999999997 58888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.52  E-value=0.021  Score=47.98  Aligned_cols=36  Identities=28%  Similarity=0.353  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      ++.++|+|.| .||+|..+++.|++.|. ++++++.+.
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4567899998 69999999999999996 688887753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.51  E-value=0.0066  Score=50.69  Aligned_cols=101  Identities=22%  Similarity=0.139  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~~~~D~vi~  157 (250)
                      .+++|+|+|+++ +|..+++.+...|.+|+++++++++.+.+.+.    +.. ...|..+.+....   .-.+++|++++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~  207 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKEL----GAD-HVIDYKEEDLEEELRLTGGGGADVVID  207 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHh----CCc-eeccCCcCCHHHHHHHhcCCCCCEEEE
Confidence            567999999988 99999998888999999999988776654321    111 1123333222221   01246999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                      +++..                  .....+++.++. .++++.++.....
T Consensus       208 ~~~~~------------------~~~~~~~~~l~~-~G~~v~~~~~~~~  237 (271)
T cd05188         208 AVGGP------------------ETLAQALRLLRP-GGRIVVVGGTSGG  237 (271)
T ss_pred             CCCCH------------------HHHHHHHHhccc-CCEEEEEccCCCC
Confidence            87631                  112334444443 3678888776543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.48  E-value=0.021  Score=49.45  Aligned_cols=64  Identities=19%  Similarity=0.267  Sum_probs=47.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|.| .|-+|..+++.|++.|++|++.+|++++.+++.+.    +..       ...+..++ ..+.|+||-+.
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~----g~~-------~~~s~~~~-~~~aDvVi~~v   65 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDK----GAT-------PAASPAQA-AAGAEFVITML   65 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHc----CCc-------ccCCHHHH-HhcCCEEEEec
Confidence            3677777 89999999999999999999999999888776432    111       11223333 56789999875

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.48  E-value=0.016  Score=50.02  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.||+|.|.|.++-+|+.++..|+++|++|+++.|+...+++..+     +..++..=+.++..++... -+...+|-.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~-----~ADIVIsavg~~~~v~~~~-ik~GaiVID  229 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR-----QADIVVAAVGRPRLIDADW-LKPGAVVID  229 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh-----cCCEEEEecCChhcccHhh-ccCCcEEEE
Confidence            5789999999999999999999999999999999776655554332     2345555566666666542 233344444


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      .|+..
T Consensus       230 vgin~  234 (301)
T PRK14194        230 VGINR  234 (301)
T ss_pred             ecccc
Confidence            55543

>PRK07574 formate dehydrogenase; Provisional

Probab=96.47  E-value=0.012  Score=52.74  Aligned_cols=70  Identities=17%  Similarity=0.081  Sum_probs=49.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.| .|.||+.+++.|...|++|+..+|.....+. .+   ..++       .-..+++++ +..+|+|+.+
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~---~~g~-------~~~~~l~el-l~~aDvV~l~  255 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQ---ELGL-------TYHVSFDSL-VSVCDVVTIH  255 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hh---hcCc-------eecCCHHHH-hhcCCEEEEc
Confidence            57899999999 5999999999999999999999987532211 11   0111       112345543 6889999887


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ...
T Consensus       256 lPl  258 (385)
T PRK07574        256 CPL  258 (385)
T ss_pred             CCC
Confidence            643

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.46  E-value=0.02  Score=50.83  Aligned_cols=75  Identities=20%  Similarity=0.150  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCc----chhhhCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDL----DPAIFEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~----~~~~~~~~D~  154 (250)
                      .+.+|+|.|+ |++|..+++.+...|. +|+++++++++.+.+.+ +   ++. ...|..+. +.+    .+..-+++|+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~---Ga~-~~i~~~~~~~~~~~~v~~~~~~~~d~  260 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-F---GVT-EFVNPKDHDKPVQEVIAEMTGGGVDY  260 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c---CCc-eEEcccccchhHHHHHHHHhCCCCCE
Confidence            5789999985 9999999988888898 79999999888776543 2   121 11232221 122    2211236899


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      ++.+.|.
T Consensus       261 vid~~G~  267 (369)
T cd08301         261 SFECTGN  267 (369)
T ss_pred             EEECCCC
Confidence            9998763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK08328 hypothetical protein; Provisional

Probab=96.44  E-value=0.018  Score=48.07  Aligned_cols=36  Identities=25%  Similarity=0.330  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      +++++|+|.| .||+|.++++.|++.|. ++++++.+.
T Consensus        25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            4567899998 69999999999999997 688887653

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.42  E-value=0.0097  Score=49.48  Aligned_cols=36  Identities=14%  Similarity=0.237  Sum_probs=32.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~  115 (250)
                      ++++++++|.|| |+.|..+++.|.+.|.   +|.+++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            467789999996 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.41  E-value=0.055  Score=44.56  Aligned_cols=97  Identities=15%  Similarity=0.118  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---------------CCCCeeEEEeeCCCccCcc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---------------DEETLQVCKGDTRNPKDLD  145 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---------------~~~~~~~v~~Dl~d~~~~~  145 (250)
                      .+.+||+-|+..|   .=+..|+++|++|++++.++..++.+.++.               ...+++++.+|+.+.+.- 
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-  109 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA-  109 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc-
Confidence            3458999997554   345668899999999999998776542211               134678889999876531 


Q ss_pred             hhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCC
Q 025619          146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS  193 (250)
Q Consensus       146 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~  193 (250)
                        ..+..|.++-.+...+.+.          +.--.-...+.++++.|
T Consensus       110 --~~~~fD~i~D~~~~~~l~~----------~~R~~~~~~l~~lLkpg  145 (213)
T TIGR03840       110 --DLGPVDAVYDRAALIALPE----------EMRQRYAAHLLALLPPG  145 (213)
T ss_pred             --cCCCcCEEEechhhccCCH----------HHHHHHHHHHHHHcCCC
Confidence              1245788887765544321          11112345666777765

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.39  E-value=0.0095  Score=51.07  Aligned_cols=75  Identities=16%  Similarity=0.193  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhhh-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~-~~~D~vi  156 (250)
                      .+++++|+|++|++|..+++.+...|++|+++.+++++.+.+. ..   ++.. ..+..+.+.   +.+..- +++|.++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i  213 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-AL---GADI-AINYREEDFVEVVKAETGGKGVDVIL  213 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCcE-EEecCchhHHHHHHHHcCCCCeEEEE
Confidence            4679999999999999999999999999999999887766442 22   1211 122222221   221111 3599999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      +++|
T Consensus       214 ~~~~  217 (325)
T TIGR02824       214 DIVG  217 (325)
T ss_pred             ECCc
Confidence            9876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.38  E-value=0.011  Score=51.42  Aligned_cols=75  Identities=24%  Similarity=0.164  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---CcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~~~~D~vi~  157 (250)
                      .+.+++|.|++|.+|..+++.+...|.+|+++.+++++.+.+.+ +.   ...+ .|..+.+   .+.+..-+++|.+++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~~v-~~~~~~~~~~~~~~~~~~~vd~v~~  213 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LG---CDRP-INYKTEDLGEVLKKEYPKGVDVVYE  213 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cC---CceE-EeCCCccHHHHHHHhcCCCCeEEEE
Confidence            46799999999999999999888889999999998877665532 21   2111 2322221   111111236899998


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      +.|
T Consensus       214 ~~g  216 (329)
T cd08250         214 SVG  216 (329)
T ss_pred             CCc
Confidence            865

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.38  E-value=0.015  Score=51.18  Aligned_cols=67  Identities=13%  Similarity=0.079  Sum_probs=48.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.|- |.||+.+++.|...|++|++.+|..+.... . .   .++.        ..++++. +.+.|+|+.+
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-~---~~~~--------~~~l~el-l~~aDiV~l~  211 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAE-K-E---LGAE--------YRPLEEL-LRESDFVSLH  211 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhH-H-H---cCCE--------ecCHHHH-HhhCCEEEEe
Confidence            578999999995 999999999999999999999987543211 0 0   0111        1234443 6778998887


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .-
T Consensus       212 lP  213 (333)
T PRK13243        212 VP  213 (333)
T ss_pred             CC
Confidence            64

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.38  E-value=0.011  Score=47.11  Aligned_cols=73  Identities=19%  Similarity=0.272  Sum_probs=47.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh---h---------------hHhhhhCcCC--CC--CeeEEEeeCCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---E---------------KATTLFGKQD--EE--TLQVCKGDTRN  140 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~---~---------------~~~~~~~~~~--~~--~~~~v~~Dl~d  140 (250)
                      +|+|.| .||+|.++++.|++.|. ++++++.+.   +               |.+.+.+.+.  .+  +++.+...+++
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            478888 59999999999999998 599998875   1               1111111111  22  34445555544


Q ss_pred             ccCcchhhhCCCcEEEEcC
Q 025619          141 PKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       141 ~~~~~~~~~~~~D~vi~~A  159 (250)
                       +.+.+ +++++|+||.+.
T Consensus        80 -~~~~~-~l~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEG-LFGDCDIVVEAF   96 (174)
T ss_pred             -hhHHH-HhcCCCEEEECC
Confidence             34443 368899999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.38  E-value=0.019  Score=45.04  Aligned_cols=42  Identities=26%  Similarity=0.305  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      .+.||+++|.| =|.+|+.+|+.|...|++|+++.++|-++-+
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq   61 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ   61 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence            46899999999 7999999999999999999999999866443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.37  E-value=0.016  Score=47.24  Aligned_cols=77  Identities=21%  Similarity=0.280  Sum_probs=50.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---hhhHhh---------------hhCcCC--C--CCeeEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATT---------------LFGKQD--E--ETLQVCK  135 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~---~~~~~~---------------~~~~~~--~--~~~~~v~  135 (250)
                      .++.++|+|.|+ ||+|+.++..|++.|. ++++++++   .+.+..               +.+.+.  .  .+++.+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            356678999995 8999999999999998 69999987   332221               111110  1  2344455


Q ss_pred             eeCCCccCcchhhhCCCcEEEEc
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .++++ +.+.+ +++++|+||-+
T Consensus        97 ~~i~~-~~~~~-~~~~~DlVi~a  117 (200)
T TIGR02354        97 EKITE-ENIDK-FFKDADIVCEA  117 (200)
T ss_pred             eeCCH-hHHHH-HhcCCCEEEEC
Confidence            56643 34443 36789999876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.37  E-value=0.02  Score=51.70  Aligned_cols=81  Identities=14%  Similarity=0.161  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecChhhHhhhhCcCCCC----CeeEEEeeCCCccCcchhh---h-
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQDEE----TLQVCKGDTRNPKDLDPAI---F-  149 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~~~~~~~~~~~~~~----~~~~v~~Dl~d~~~~~~~~---~-  149 (250)
                      .+.+|+|.||+|++|...++.+...|.   +|+++++++++++.+.+.....    +......|..+.+++.+.+   . 
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            467999999999999998887666654   7999999998877654321100    2222223433322222221   2 


Q ss_pred             -CCCcEEEEcCcC
Q 025619          150 -EGVTHVICCTGT  161 (250)
Q Consensus       150 -~~~D~vi~~Ag~  161 (250)
                       .++|++|.+.|.
T Consensus       255 g~g~D~vid~~g~  267 (410)
T cd08238         255 GQGFDDVFVFVPV  267 (410)
T ss_pred             CCCCCEEEEcCCC
Confidence             268999988763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.36  E-value=0.014  Score=50.04  Aligned_cols=76  Identities=18%  Similarity=0.106  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---Ccchhhh-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~-~~~D~vi  156 (250)
                      .+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ .   ++.. ..|..+.+   .+.+..- .++|.++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  218 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-L---GAAH-VIVTDEEDLVAEVLRITGGKGVDVVF  218 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-c---CCCE-EEecCCccHHHHHHHHhCCCCceEEE
Confidence            46799999999999999999999999999999998877666532 2   1211 12222211   1221111 2599999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      ++++.
T Consensus       219 ~~~~~  223 (328)
T cd08268         219 DPVGG  223 (328)
T ss_pred             ECCch
Confidence            98763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.35  E-value=0.036  Score=48.30  Aligned_cols=74  Identities=18%  Similarity=0.236  Sum_probs=46.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh-------------------HhhhhCcC----CCCCeeEEEeeCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK-------------------ATTLFGKQ----DEETLQVCKGDTR  139 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~-------------------~~~~~~~~----~~~~~~~v~~Dl~  139 (250)
                      +|||.|+ ||+|.++++.|+..|. ++.+++.+.-.                   .+.+++.+    ..-.++.+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            4888884 9999999999999997 68888764321                   11111111    1223455566676


Q ss_pred             CccCcchhhhCCCcEEEEcC
Q 025619          140 NPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       140 d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.....+ ++.+.|+||.+.
T Consensus        80 ~~~~~~~-f~~~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVE-FFKQFDLVFNAL   98 (312)
T ss_pred             CccchHH-HHhcCCEEEECC
Confidence            5422222 478899999864

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.34  E-value=0.016  Score=51.54  Aligned_cols=75  Identities=17%  Similarity=0.233  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|+|.| +|+||..+++.+...|++|++++.+.++..+..+++   ++..+ .|..+.+.+.+. .+++|++|.+.|
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~v-i~~~~~~~~~~~-~~~~D~vid~~g  256 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADSF-LVSTDPEKMKAA-IGTMDYIIDTVS  256 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcEE-EcCCCHHHHHhh-cCCCCEEEECCC
Confidence            467999976 599999999988888999988877766544433322   22211 233333344432 357899999887


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       257 ~  257 (360)
T PLN02586        257 A  257 (360)
T ss_pred             C
Confidence            3

>PLN03139 formate dehydrogenase; Provisional

Probab=96.34  E-value=0.016  Score=52.00  Aligned_cols=70  Identities=21%  Similarity=0.135  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..+.+|+|.|.| .|.||+.+++.|...|++|+..+|.....+...    ..++.       -.+++++. +..+|+|+.
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~----~~g~~-------~~~~l~el-l~~sDvV~l  261 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK----ETGAK-------FEEDLDAM-LPKCDVVVI  261 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh----hcCce-------ecCCHHHH-HhhCCEEEE
Confidence            368899999999 799999999999999999999988753222111    11111       12346653 678999988


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      +.-
T Consensus       262 ~lP  264 (386)
T PLN03139        262 NTP  264 (386)
T ss_pred             eCC
Confidence            763

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.32  E-value=0.022  Score=49.06  Aligned_cols=63  Identities=16%  Similarity=0.133  Sum_probs=46.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.    +..       ...+..++ ..++|+||.+..
T Consensus         2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~-------~~~~~~~~-~~~aDivi~~vp   64 (291)
T TIGR01505         2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA----GAV-------TAETARQV-TEQADVIFTMVP   64 (291)
T ss_pred             EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCc-------ccCCHHHH-HhcCCEEEEecC
Confidence            56676 79999999999999999999999999887765432    111       11233333 578999998863

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.30  E-value=0.011  Score=51.81  Aligned_cols=75  Identities=17%  Similarity=0.174  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc--Ccchhhh-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAIF-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~--~~~~~~~-~~~D~vi  156 (250)
                      .+++|+|+|+ |++|..+++.+...|++ |+++++++++.+.+.+ +   ++.. ..|..+.+  .+.+..- .++|++|
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~---ga~~-~i~~~~~~~~~~~~~~~~~~~d~vi  236 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA-L---GADF-VINSGQDDVQEIRELTSGAGADVAI  236 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---CCCE-EEcCCcchHHHHHHHhCCCCCCEEE
Confidence            4789999985 99999999988889998 9999998887765432 2   2211 23333332  2222111 2699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .+.|.
T Consensus       237 d~~g~  241 (339)
T cd08239         237 ECSGN  241 (339)
T ss_pred             ECCCC
Confidence            98764

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08223 hypothetical protein; Validated

Probab=96.30  E-value=0.045  Score=47.05  Aligned_cols=36  Identities=31%  Similarity=0.347  Sum_probs=30.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      .++..+|+|.| .||+|..++..|++.|. ++++++.+
T Consensus        24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35667899998 69999999999999997 68888765

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.27  E-value=0.037  Score=48.68  Aligned_cols=65  Identities=12%  Similarity=0.123  Sum_probs=47.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.| .|.||+.+++.|...|++|++.+|+++.....        ..       -..+++++ +.+.|+|+.+
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~--------~~-------~~~~l~el-l~~aDiVil~  205 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDF--------LT-------YKDSVKEA-IKDADIISLH  205 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh--------hh-------ccCCHHHH-HhcCCEEEEe
Confidence            57899999998 69999999999999999999999987542210        00       11234543 6788888876


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .-
T Consensus       206 lP  207 (330)
T PRK12480        206 VP  207 (330)
T ss_pred             CC
Confidence            53

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.25  E-value=0.026  Score=50.45  Aligned_cols=78  Identities=21%  Similarity=0.260  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh-------------------hHhhhhCcCC--C--CCeeEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD--E--ETLQVC  134 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~-------------------~~~~~~~~~~--~--~~~~~v  134 (250)
                      .++.++|+|.| .||+|.++++.|+..|. ++++++.+.-                   |.+.+++.+.  .  .+++.+
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            35677899998 69999999999999996 7888887621                   1121111111  2  234555


Q ss_pred             EeeCCCccCcchhhhCCCcEEEEcC
Q 025619          135 KGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       135 ~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ...++. +.+.+ +++++|+||.+.
T Consensus       117 ~~~i~~-~~~~~-~~~~~DlVid~~  139 (370)
T PRK05600        117 RERLTA-ENAVE-LLNGVDLVLDGS  139 (370)
T ss_pred             eeecCH-HHHHH-HHhCCCEEEECC
Confidence            555543 33443 368899999875

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.24  E-value=0.012  Score=51.21  Aligned_cols=41  Identities=27%  Similarity=0.375  Sum_probs=35.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      ++|.|.| .|.+|..++..|++.|++|.+++|+++..+.+.+
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~   42 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINA   42 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence            4789998 5999999999999999999999999887776543

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.23  E-value=0.056  Score=47.60  Aligned_cols=42  Identities=31%  Similarity=0.427  Sum_probs=37.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .+.+|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~  207 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK  207 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4789999999 99999999988889999999999998877654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.22  E-value=0.017  Score=47.34  Aligned_cols=72  Identities=24%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+|+|.| .|.+|..-++.|++.|++|++++.+.. .++++.+   ..+++++..+... ++     +.+.|.||-
T Consensus         6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~~-~d-----l~~~~lVi~   75 (205)
T TIGR01470         6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFDA-DI-----LEGAFLVIA   75 (205)
T ss_pred             EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCCH-HH-----hCCcEEEEE
Confidence            46889999999 599999999999999999999987653 3333332   3367777766542 11     356677775


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      +.+
T Consensus        76 at~   78 (205)
T TIGR01470        76 ATD   78 (205)
T ss_pred             CCC
Confidence            543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.20  E-value=0.065  Score=49.44  Aligned_cols=70  Identities=21%  Similarity=0.208  Sum_probs=48.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCT  159 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~A  159 (250)
                      +|.|.| .|-+|.++++.|+++|++|.+.+|++++.+++.+.....+..+..     .+++++++  +.++|+|+-+.
T Consensus         3 ~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~-----~~s~~e~v~~l~~~d~Iil~v   74 (470)
T PTZ00142          3 DIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKG-----YHTLEELVNSLKKPRKVILLI   74 (470)
T ss_pred             EEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCccee-----cCCHHHHHhcCCCCCEEEEEe
Confidence            688888 799999999999999999999999999987765421111221111     12333332  24689887764

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.20  E-value=0.027  Score=48.16  Aligned_cols=70  Identities=26%  Similarity=0.307  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+ +...  ..+ .+.   ..+.   -+++|+++++.|
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~--~~~-~~~---~~~~---~~~~d~vl~~~g  201 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LGAA--EVV-VGG---SELS---GAPVDLVVDSVG  201 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCc--EEE-ecc---cccc---CCCceEEEECCC
Confidence            47899999999999999999999999999999998888776653 2211  111 111   1111   136899998865

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02494 adenosylhomocysteinase

Probab=96.19  E-value=0.018  Score=52.66  Aligned_cols=40  Identities=23%  Similarity=0.303  Sum_probs=35.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~  119 (250)
                      .+.||+++|.| .|.||+.+++.+...|++|+++.+++.+.
T Consensus       251 ~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        251 MIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            36799999999 57999999999999999999999988654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.18  E-value=0.028  Score=48.60  Aligned_cols=78  Identities=15%  Similarity=0.124  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.||+|.|.|.++-+|+.++..|+++|+.|+++. |+.+ +++..+     ...++..=+.+++.+++.. -+...+|-
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~-----~ADIVIsavg~~~~v~~~~-lk~GavVI  227 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR-----RADILVAAVGRPEMVKGDW-IKPGATVI  227 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh-----cCCEEEEecCChhhcchhe-ecCCCEEE
Confidence            57899999999999999999999999999999994 6543 333221     2345556666666666532 23344555


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      ..|...
T Consensus       228 DvGin~  233 (296)
T PRK14188        228 DVGINR  233 (296)
T ss_pred             EcCCcc
Confidence            556543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.17  E-value=0.022  Score=52.20  Aligned_cols=40  Identities=28%  Similarity=0.271  Sum_probs=35.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~  119 (250)
                      .+.||+++|.| .|.||+.+++.+...|++|+++.+++.+.
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            57899999999 56799999999999999999998887654

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.17  E-value=0.021  Score=51.03  Aligned_cols=75  Identities=19%  Similarity=0.216  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|+|.|+ |++|..+++.....|++|++++++.++..+..+.+   ++.. ..|..+.+.+.+. .+++|++|.++|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~-~i~~~~~~~v~~~-~~~~D~vid~~G  251 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADS-FLVTTDSQKMKEA-VGTMDFIIDTVS  251 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcE-EEcCcCHHHHHHh-hCCCcEEEECCC
Confidence            4679999885 99999999988888999999888765433333222   2221 1233333334432 357899999886


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       252 ~  252 (375)
T PLN02178        252 A  252 (375)
T ss_pred             c
Confidence            4

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.16  E-value=0.0099  Score=40.19  Aligned_cols=33  Identities=27%  Similarity=0.310  Sum_probs=22.1

Q ss_pred             CEEEEEcCCChHHHH--HHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|||+|+|+|.|.+  ++..+ ..|++.+.+....
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            899999999999999  55544 6678888776543

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.15  E-value=0.028  Score=46.42  Aligned_cols=77  Identities=17%  Similarity=0.004  Sum_probs=49.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecCh----------hhHhhhhCcCCCCCeeEE-EeeCCCccCcch
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDP----------EKATTLFGKQDEETLQVC-KGDTRNPKDLDP  146 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~----------~~~~~~~~~~~~~~~~~v-~~Dl~d~~~~~~  146 (250)
                      ++++++|.|-| -|.+|+++++.|.+.|..|+.+ +.+.          +.++...+.   ..+..+ ..|..+.+.+..
T Consensus        20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~   95 (217)
T cd05211          20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVAL---GGSARVKVQDYFPGEAILG   95 (217)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhh---CCccccCcccccCccccee
Confidence            56889999999 7999999999999999976665 4444          333322221   112211 133334444442


Q ss_pred             hhhCCCcEEEEcCcCC
Q 025619          147 AIFEGVTHVICCTGTT  162 (250)
Q Consensus       147 ~~~~~~D~vi~~Ag~~  162 (250)
                         .++|++|-||...
T Consensus        96 ---~~~DVlipaA~~~  108 (217)
T cd05211          96 ---LDVDIFAPCALGN  108 (217)
T ss_pred             ---ccccEEeeccccC
Confidence               3799999999654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.14  E-value=0.02  Score=51.54  Aligned_cols=71  Identities=10%  Similarity=0.106  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ..+++|.| .|-+|+.++++|.++|.++++++.+..  ++..    ..+..++.+|.+|++.++++-.++.+.|+-+.
T Consensus       240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~----~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL----PDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhc----cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            35788888 578999999999999999988886532  2211    34577899999999999876567889888654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.14  E-value=0.014  Score=51.93  Aligned_cols=75  Identities=16%  Similarity=0.162  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---CcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~~~~~D~vi  156 (250)
                      .+++|+|+|+ |+||..+++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+.+   .+.+..-+++|++|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~---Ga~~-~i~~~~~~~~~~i~~~~~~g~d~vi  264 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-L---GATA-TVNAGDPNAVEQVRELTGGGVDYAF  264 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-c---CCce-EeCCCchhHHHHHHHHhCCCCCEEE
Confidence            4679999985 9999999888888899 69999999888765532 2   2211 13333322   22221123689999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .+.|.
T Consensus       265 d~~G~  269 (371)
T cd08281         265 EMAGS  269 (371)
T ss_pred             ECCCC
Confidence            98864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.13  E-value=0.027  Score=48.57  Aligned_cols=75  Identities=25%  Similarity=0.289  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hh--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~--~~~D~vi  156 (250)
                      .+..++|+|++|.+|..+++.+...|.+|+.+++++++.+.+.+ +   ++.. ..|..+.+..+..  ..  .++|.++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~---g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-L---GADV-AVDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence            46789999999999999999888999999999999887766532 2   1221 1233333222211  12  3599999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      ++.|
T Consensus       217 ~~~g  220 (324)
T cd08244         217 DGVG  220 (324)
T ss_pred             ECCC
Confidence            9876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.12  E-value=0.028  Score=48.41  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=34.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      +|.|.|+ |.+|..++..|.+.|++|++++|+++..+.+.
T Consensus         2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~   40 (304)
T PRK06522          2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALN   40 (304)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence            6899995 99999999999999999999999887766654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.10  E-value=0.027  Score=49.33  Aligned_cols=38  Identities=24%  Similarity=0.233  Sum_probs=33.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      ++|.|.| +|-||..++..|+..|++|++.+++++..+.
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            6788988 5999999999999999999999999876544

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.10  E-value=0.055  Score=41.50  Aligned_cols=42  Identities=24%  Similarity=0.114  Sum_probs=36.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT  120 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~  120 (250)
                      +++||+|+|.|.+.-+|+.++..|.++|++|.++.++...++
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~   66 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ   66 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence            578999999999999999999999999999999986554333

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.09  E-value=0.048  Score=42.77  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=45.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.||+++|.|.+.-+|+.++..|.++|+.|.++..+.+.+++..+     +..++..-+-.+.-++...+ +.+.++-.
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~-----~ADIVVsa~G~~~~i~~~~i-k~gavVID  106 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR-----RADIVVSAVGKPNLIKADWI-KPGAVVID  106 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT-----TSSEEEE-SSSTT-B-GGGS--TTEEEEE
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee-----eccEEeeeeccccccccccc-cCCcEEEe
Confidence            4789999999999999999999999999999998776555544332     22334444444555554322 33455555


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .|..
T Consensus       107 vG~~  110 (160)
T PF02882_consen  107 VGIN  110 (160)
T ss_dssp             --CE
T ss_pred             cCCc
Confidence            5544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.06  E-value=0.03  Score=51.20  Aligned_cols=75  Identities=21%  Similarity=0.239  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +.+|+|+|+|+ |++|.++++.|+++|++|++.+.++..  .+++.+.  ..++.+..++..     . ..+.++|.||.
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~--~~gi~~~~g~~~-----~-~~~~~~d~vv~   73 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKM--FDGLVFYTGRLK-----D-ALDNGFDILAL   73 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhc--cCCcEEEeCCCC-----H-HHHhCCCEEEE
Confidence            46789999997 599999999999999999999876532  1222110  124544433311     1 12467899999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      ..|+..
T Consensus        74 spgi~~   79 (445)
T PRK04308         74 SPGISE   79 (445)
T ss_pred             CCCCCC
Confidence            998763

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.05  E-value=0.016  Score=49.13  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=28.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEE-EecChhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEK  118 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~-~~R~~~~  118 (250)
                      ++|.|+|++|.+|+.+++.+.+. +.+++. +++++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~   39 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSP   39 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence            47999999999999999988864 678766 4566544

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.05  E-value=0.028  Score=49.08  Aligned_cols=37  Identities=16%  Similarity=0.065  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .+.||++.|.| .|.||+++++.+..-|.+|++.+|..
T Consensus       142 ~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        142 EIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            67899999999 69999999999999999999998853

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.02  E-value=0.019  Score=49.52  Aligned_cols=76  Identities=18%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc---Ccchhh-hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAI-FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~---~~~~~~-~~~~D~vi  156 (250)
                      .+.+++|.||+|.+|.++++.+...|++|+++.++.++.+.+.+ .   ++..+ .|..+.+   .+.+.. -.++|+++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~  213 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGPV-VSTEQPGWQDKVREAAGGAPISVAL  213 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCEE-EcCCCchHHHHHHHHhCCCCCcEEE
Confidence            46799999999999999999888999999999988877666543 2   22211 1222221   122211 13699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .+.|.
T Consensus       214 d~~g~  218 (324)
T cd08292         214 DSVGG  218 (324)
T ss_pred             ECCCC
Confidence            98763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.054  Score=46.54  Aligned_cols=41  Identities=29%  Similarity=0.276  Sum_probs=36.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~  119 (250)
                      ++.||+|+|.|+++-+|+.++..|.++|++|+++.++...+
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l  195 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM  195 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            57899999999999999999999999999999998765433

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.02  E-value=0.048  Score=49.44  Aligned_cols=39  Identities=28%  Similarity=0.177  Sum_probs=35.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      +|.|.| .|.+|..++..|++.|++|+++++++++.+.+.
T Consensus         2 kI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~   40 (411)
T TIGR03026         2 KIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN   40 (411)
T ss_pred             EEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence            577887 799999999999999999999999999887765

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.01  E-value=0.025  Score=48.49  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+.+|+|.|++|.+|..+++.+...|++|+++.+++++.+.+.+ +   ++..+..+-.+ .+.+.+. -+++|.++++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~  216 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-L---GADEVVIDDGAIAEQLRAA-PGGFDKVLELV  216 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEEEecCccHHHHHHHh-CCCceEEEECC
Confidence            46799999999999999999988999999999998877665532 2   22222212101 1122221 24699999987


Q ss_pred             c
Q 025619          160 G  160 (250)
Q Consensus       160 g  160 (250)
                      |
T Consensus       217 ~  217 (320)
T cd08243         217 G  217 (320)
T ss_pred             C
Confidence            6

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=96.00  E-value=0.03  Score=50.55  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=48.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.|++|+|.| .|.||+.+++.+...|++|+++++++.+..+...    .+..+.  +      ++++ ..+.|++|.+
T Consensus       192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~----~G~~v~--~------leea-l~~aDVVIta  257 (406)
T TIGR00936       192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM----DGFRVM--T------MEEA-AKIGDIFITA  257 (406)
T ss_pred             CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh----cCCEeC--C------HHHH-HhcCCEEEEC
Confidence            36899999999 7999999999999999999999999876543321    122221  1      1222 3566777776


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      .|.
T Consensus       258 TG~  260 (406)
T TIGR00936       258 TGN  260 (406)
T ss_pred             CCC
Confidence            664

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.99  E-value=0.059  Score=43.78  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=29.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      ++.++|+|.| .||+|.++++.|+..|. ++++++.+
T Consensus        19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4567899998 56699999999999997 58888765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=95.96  E-value=0.042  Score=47.30  Aligned_cols=59  Identities=24%  Similarity=0.248  Sum_probs=43.6

Q ss_pred             CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           90 GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        90 asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |.|-+|..+++.|++.|++|++.+|++++.+.+.+.    ++.     .+  ++..++ ..+.|+||.+..
T Consensus         3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~----g~~-----~~--~s~~~~-~~~advVil~vp   61 (288)
T TIGR01692         3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAA----GAQ-----AA--ASPAEA-AEGADRVITMLP   61 (288)
T ss_pred             cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHc----CCe-----ec--CCHHHH-HhcCCEEEEeCC
Confidence            579999999999999999999999999887766532    221     11  223333 577899998863

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.93  E-value=0.017  Score=46.26  Aligned_cols=38  Identities=26%  Similarity=0.327  Sum_probs=32.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL  122 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~  122 (250)
                      +|.|.|| |.+|+.++..++..|++|++++++++.++..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence            5788896 9999999999999999999999998876543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.92  E-value=0.03  Score=48.85  Aligned_cols=72  Identities=22%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc------CcchhhhCCCcEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------DLDPAIFEGVTHVI  156 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~------~~~~~~~~~~D~vi  156 (250)
                      ++|.|.| +|.=|.+++..|+++|++|++.+|+++-.+++...  +.+..+++ |+.-++      ++.++ .++.|+|+
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~--~~N~~yLp-~i~lp~~l~at~Dl~~a-~~~ad~iv   76 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINET--RENPKYLP-GILLPPNLKATTDLAEA-LDGADIIV   76 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhc--CcCccccC-CccCCcccccccCHHHH-HhcCCEEE
Confidence            4788999 58889999999999999999999999888776543  22333333 443333      44433 56688887


Q ss_pred             EcC
Q 025619          157 CCT  159 (250)
Q Consensus       157 ~~A  159 (250)
                      -..
T Consensus        77 ~av   79 (329)
T COG0240          77 IAV   79 (329)
T ss_pred             EEC
Confidence            654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	250
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		2e-06

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRR 168
           ++ L+R  +    + G+ D     V  GD  +   ++PA F+G+  ++  T  +A P  +
Sbjct: 33  AKGLVRSAQGKEKIGGEAD-----VFIGDITDADSINPA-FQGIDALVILT--SAVPKMK 84
Query: 169 --------------WDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW 213
                         ++    PE+VDW G +N + A   + +K IV+V S+G T  +  P 
Sbjct: 85  PGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-PL 143
Query: 214 SIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           + +    +L +K+  E ++  SG P+TII
Sbjct: 144 NKLGNGNILVWKRKAEQYLADSGTPYTII 172

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	250
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-42
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-41
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-38
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-34
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-29
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	7e-23
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	3e-21
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	3e-17
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-16
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	3e-16
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	8e-15
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-14
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	4e-14
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-14
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	8e-14
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-13
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-13
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-13
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	6e-13
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	5e-11
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-10
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-10
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	3e-10
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-10
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-08
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	7e-08
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	3e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	4e-06
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	6e-06
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	1e-05

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  143 bits (363), Expect = 2e-42
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKG 136
           +++   VLV G SG  GQ+V   L   +    ++ L+R  +    + G+       V  G
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-----ADVFIG 55

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTA------------FPSRRWDGDNTPEKVDWEGVR 184
           D  +   ++PA F+G+  ++  T                 P   ++    PE+VDW G +
Sbjct: 56  DITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114

Query: 185 NLVSALPSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
           N + A   + +K IV+V S+G T  +  P + +    +L +K+  E ++  SG P+TII 
Sbjct: 115 NQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 173

Query: 244 LCIY 247
               
Sbjct: 174 AGGL 177

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  140 bits (356), Expect = 2e-41
 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 16/175 (9%)

Query: 70  PNSDSKVTPASSSKL-VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
            +  S         + VLV G +G V + +++ L ++  +   ++R+ E+   L  +   
Sbjct: 8   HHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGAS 67

Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
           +   +   +    +D   A F  +  V+   G     S    G +    +D  G    + 
Sbjct: 68  D---IVVANL--EEDFSHA-FASIDAVVFAAG-----SGPHTGADKTILIDLWGAIKTIQ 116

Query: 188 SALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
            A    +KR ++VSSVG    ++ P   MN+   L  K++ +D +++S L +TI+
Sbjct: 117 EAEKRGIKRFIMVSSVGTVDPDQGP---MNMRHYLVAKRLADDELKRSSLDYTIV 168

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  132 bits (334), Expect = 2e-38
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 16/160 (10%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G   +A  +    +  +L+RD  +  +           V  GD     D+
Sbjct: 6   IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADV 61

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
           D     G   VI   GT          D +P  V  EG RN+V+A+ +  + ++V  +S 
Sbjct: 62  DKT-VAGQDAVIVLLGT--------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112

Query: 204 GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
            +    +       L  V          +++SGL +  + 
Sbjct: 113 FL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVM 150

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  121 bits (305), Expect = 4e-34
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 20/163 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD-TRNPKD 143
           + + G +G VG+ ++ SL + + +     R  E+            ++    D    P++
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN------VKAVHFDVDWTPEE 56

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
           +      G+  +I  +G+            +  KVD  G   L+ A   + +KR +L+S+
Sbjct: 57  MAKQ-LHGMDAIINVSGSGG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106

Query: 203 VGVTK-FNELPWSIMNLFGVLKYKKMGEDFVQK-SGLPFTIIS 243
           +   +    +      L      K   + ++ K + L +TII 
Sbjct: 107 IFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQ 149

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  108 bits (271), Expect = 6e-29
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 23/162 (14%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           VL+ G  G + + V+  L  +  IK  L  R P K    +        Q+  GD  N   
Sbjct: 26  VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN----SQIIMGDVLNHAA 81

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
           L  A  +G   V                    E +D +    + +     +KR++ V S+
Sbjct: 82  LKQA-MQGQDIVYANLT--------------GEDLDIQANSVIAAMKACDVKRLIFVLSL 126

Query: 204 GVTK---FNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           G+        + W+   +   LK  +   D ++ SGL +TI+
Sbjct: 127 GIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTIL 168

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 92.1 bits (229), Expect = 7e-23
 Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 22/173 (12%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
              K +++ G SG VG  ++   L+R  +   ++R PEK      K + E L+V K D  
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----KIENEHLKVKKADVS 56

Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIV 198
           +  ++     +G   VI               +        +    ++  +  + + R +
Sbjct: 57  SLDEVCEVC-KGADAVISAFNPGW-------NNPDIYDETIKVYLTIIDGVKKAGVNRFL 108

Query: 199 LVSSVGV------TKFNELPWSIMNLFGVLKY--KKMGEDFVQKSGLPFTIIS 243
           +V   G        +  +      N+   +K   +      +++  + +   S
Sbjct: 109 MVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 87.8 bits (217), Expect = 3e-21
 Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 29/167 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           + + G +G + Q + A+LL+  ++   L  R  +         D E + V +G  +NP  
Sbjct: 8   ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGX 66

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202
           L+ A       V      +                    + ++V AL   +++R++ VS 
Sbjct: 67  LEQA-VTNAEVVFVGAMESG-----------------SDMASIVKALSRXNIRRVIGVSM 108

Query: 203 VGVTKFNELP-----WSIMNLFG-VLKYKKMGEDFVQKSGLPFTIIS 243
            G+    E P     W+  NL    ++ ++   + +++S L +TI+ 
Sbjct: 109 AGL--SGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILR 153

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 77.5 bits (191), Expect = 3e-17
 Identities = 37/165 (22%), Positives = 59/165 (35%), Gaps = 20/165 (12%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
            +K V + G SG  G++++  +L + + S++ L  R          K     +     D 
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDF 72

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRI 197
               D   A F+G     CC GTT    R   G     +VD + V      A     K  
Sbjct: 73  EKLDDYASA-FQGHDVGFCCLGTT----RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHF 127

Query: 198 VLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
            L+SS G  K +   +        L+ K   E  V++       +
Sbjct: 128 NLLSSKGADKSSNFLY--------LQVKGEVEAKVEELKFDRYSV 164

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 22/172 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
             V G +G +G     ++ +      L+ R   +   L   + E        +  +   L
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE----CRVAEMLDHAGL 71

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
           + A   G+  VI   G      RRW  +                + L + + RI+ V S 
Sbjct: 72  ERA-LRGLDGVIFSAGYYPSRPRRWQEE---VASALGQTNPFYAACLQARVPRILYVGSA 127

Query: 204 GV-------TKFNELPWSIMNLFGVLKY---KKMGEDFV---QKSGLPFTII 242
                       +E  +      G   Y   K   ++      ++GLP  I 
Sbjct: 128 YAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIG 179

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 73.9 bits (182), Expect = 3e-16
 Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
           S+ K VL+AG +G  G+ ++  +LS    +++             ++             
Sbjct: 3   STPKRVLLAGATGLTGEHLLDRILSEPTLAKV---------IAPARKALAEHPRLDNPVG 53

Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIV 198
              +L P +   +    CC GTT    +    +     VD++    +   AL    +  +
Sbjct: 54  PLAELLPQLDGSIDTAFCCLGTTI---KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYL 110

Query: 199 LVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           +VS++G    + + +         + K   E  +Q+ G P   I
Sbjct: 111 VVSALGADAKSSIFY--------NRVKGELEQALQEQGWPQLTI 146

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 26/160 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS-RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           +++ G +G +G  +    ++ +I    + +R+ EK    +       + V + D  N + 
Sbjct: 3   IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG----KVSVRQLDYFNQES 58

Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
           +  A F+G+  V+          +R              V NLV A   S +  I+ +  
Sbjct: 59  MVEA-FKGMDTVVFIPSIIHPSFKR-----------IPEVENLVYAAKQSGVAHIIFIGY 106

Query: 203 VGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
                 N    S         Y       +  SG+ +T +
Sbjct: 107 YADQHNNPFHMS--------PYFGYASRLLSTSGIDYTYV 138

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 71.3 bits (175), Expect = 8e-15
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 22/172 (12%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE--KATTLFGKQDEETLQVCKG 136
              KLV+V GG+G  G  V  +LL     K R++ R+P    A  L  +  E    V +G
Sbjct: 3   VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE----VVQG 58

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
           D  +   ++ A   G       T         W+  +  ++V     + L   A    L 
Sbjct: 59  DQDDQVIMELA-LNGAYATFIVTNY-------WESCSQEQEVKQ--GKLLADLARRLGLH 108

Query: 196 RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
            +V      + K      +          K   E++ +  G+P T + L  Y
Sbjct: 109 YVVYSGLENIKKLTAGRLAA----AHFDGKGEVEEYFRDIGVPMTSVRLPCY 156

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 69.5 bits (170), Expect = 3e-14
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 25/170 (14%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----VC 134
            S   +L+ G +G +G+ V  + L     + LL+R+   ++     Q  E+ +     + 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSS 193
            G   +   L  A  + V  VI   G+                +  E   N++ A     
Sbjct: 62  HGSIDDHASLVEA-VKNVDVVISTVGS----------------LQIESQVNIIKAIKEVG 104

Query: 194 LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
             +    S  G    N    ++     V + K      ++  G+P+T +S
Sbjct: 105 TVKRFFPSEFGNDVDN--VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS 152

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 69.2 bits (170), Expect = 4e-14
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 28/161 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + V G +G +G LV+  LL +   S    ++R+ EKA+TL     ++ ++V  GD   P+
Sbjct: 3   IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPE 58

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
            L  A F GV+ ++  +G     +                  N+V A   + +K I    
Sbjct: 59  SLQKA-FAGVSKLLFISGPHYDNTLL-----------IVQHANVVKAARDAGVKHIAYTG 106

Query: 202 SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
                +         ++  +       E  ++ + +P+T +
Sbjct: 107 YAFAEE---------SIIPLAHVHLATEYAIRTTNIPYTFL 138

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 68.8 bits (168), Expect = 7e-14
 Identities = 25/174 (14%), Positives = 58/174 (33%), Gaps = 19/174 (10%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL----QVCK 135
                VL+ GG+G +G+ +V + +S    + +L R    +     +          ++ +
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-L 194
               + + L  A  + V  VI                             LV A+  +  
Sbjct: 62  ASLDDHQRLVDA-LKQVDVVISALAG------------GVLSHHILEQLKLVEAIKEAGN 108

Query: 195 KRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIYC 248
            +  L S  G    + +  ++         K+     ++ + +P+T +S  ++ 
Sbjct: 109 IKRFLPSEFG-MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFA 161

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 68.8 bits (168), Expect = 8e-14
 Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 26/174 (14%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD------EETLQVC 134
           +   +L+ G +G +G+ +V + +     +  L+R    A     K++         + + 
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSS 193
           +GD  + + L  A  + V  VIC  G                 +  E    ++ +   + 
Sbjct: 61  EGDINDHETLVKA-IKQVDIVICAAGR----------------LLIEDQVKIIKAIKEAG 103

Query: 194 LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
             +    S  G+          +      + K      ++  G+P+T +    +
Sbjct: 104 NVKKFFPSEFGLDVDRHDAVEPVRQV--FEEKASIRRVIEAEGVPYTYLCCHAF 155

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 67.0 bits (163), Expect = 1e-13
 Identities = 32/170 (18%), Positives = 53/170 (31%), Gaps = 26/170 (15%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + V G +G  G  +VA    R  +   ++RDP+KA    G              + P  L
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-------ATVATLVKEPLVL 55

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
             A  + V  V+          R          +  +   +LVS L  S    + ++ S 
Sbjct: 56  TEADLDSVDAVVDALSVPWGSGR--------GYLHLDFATHLVSLLRNSDTLAVFILGSA 107

Query: 204 GVTK----------FNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
            +            F E   S     G L      +     + + +  IS
Sbjct: 108 SLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 66.5 bits (162), Expect = 2e-13
 Identities = 22/170 (12%), Positives = 57/170 (33%), Gaps = 29/170 (17%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G +G  G  ++    +R  +   ++R+  K T        + + + + D  +    
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----HKDINILQKDIFDLTLS 57

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203
           D +       V+   G +              +     + +L+S L  +   R+++V   
Sbjct: 58  DLS---DQNVVVDAYGISP----------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104

Query: 204 GVTKFNE----------LPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
              + +E          L  +        + K++      ++   +T IS
Sbjct: 105 ASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS 154

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 25/173 (14%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKG 136
           A   K + V G +G  G  ++    +     R  +   +   A  L    +     + +G
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT---LFQG 58

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
              N   L   +FEG       T T+        G            ++L  +A  +   
Sbjct: 59  PLLNNVPLMDTLFEGAHLAFINT-TSQAGDEIAIG------------KDLADAAKRAGTI 105

Query: 196 RIVLVSSV-GVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
           +  + SS+   + +   PW  + ++     K   E++V++ GLP T +   IY
Sbjct: 106 QHYIYSSMPDHSLYG--PWPAVPMW---APKFTVENYVRQLGLPSTFVYAGIY 153

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 65.8 bits (161), Expect = 6e-13
 Identities = 31/161 (19%), Positives = 64/161 (39%), Gaps = 30/161 (18%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + + G +G +G  V+ SL+     S    ++R+P KA  L      + + V + D  +  
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEA 57

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
            L  A  +GV  ++  + +         G   P+       RN+++A  ++ +K I   S
Sbjct: 58  ALTSA-LQGVEKLLLISSSE-------VGQRAPQ------HRNVINAAKAAGVKFIAYTS 103

Query: 202 SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
            +             +  G+       E  +  SG+ +T++
Sbjct: 104 LLHADT---------SPLGLADEHIETEKMLADSGIVYTLL 135

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 60.7 bits (147), Expect = 5e-11
 Identities = 29/175 (16%), Positives = 66/175 (37%), Gaps = 25/175 (14%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----V 133
            S  + +++ GG+G +G+ +V + LS +  + +  R     +T    Q  E  +     +
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60

Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPS 192
            +G+    + +     + V  VI         S+                 ++++A   +
Sbjct: 61  IEGEMEEHEKMVSV-LKQVDIVISALPFPMISSQ----------------IHIINAIKAA 103

Query: 193 SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
              +  L S  G  +    P        VL+ K++    ++ + LP+T +S   +
Sbjct: 104 GNIKRFLPSDFGCEEDRIKPLPPFE--SVLEKKRIIRRAIEAAALPYTYVSANCF 156

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 25/176 (14%)

Query: 71  NSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET 130
           +          SK +L+ GG+G +G  +V   L     + +  R     TTL  +     
Sbjct: 1   SGHGMEENGMKSK-ILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG 59

Query: 131 LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190
             + KG+    + L     + V  VI          +                  ++ A+
Sbjct: 60  AIIVKGELDEHEKLVEL-MKKVDVVISALAFPQILDQ----------------FKILEAI 102

Query: 191 PSS--LKRIVLVS-SVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIIS 243
             +  +KR +     V   + N LP        +++ K+M    ++++ +P+T +S
Sbjct: 103 KVAGNIKRFLPSDFGVEEDRINALPP----FEALIERKRMIRRAIEEANIPYTYVS 154

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 40/195 (20%), Positives = 69/195 (35%), Gaps = 34/195 (17%)

Query: 77  TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQV 133
                 K   V GG+G V  L+V  LL +       +RDP+       L   Q+   L++
Sbjct: 4   QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63

Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSAL 190
            + D  +    +  I  G   V       A P      D   + +    +GV N + +  
Sbjct: 64  FRADLTDELSFEAPI-AGCDFVFH----VATPVHFASEDPENDMIKPAIQGVVNVMKACT 118

Query: 191 PS-SLKRIVLVSSVGVTKFNELP----------WSIMNLFGVLK-----Y---KKMGE-- 229
            + S+KR++L SS      N+L           W+ +      K     Y   K + E  
Sbjct: 119 RAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKA 178

Query: 230 --DFVQKSGLPFTII 242
              F +++ +    +
Sbjct: 179 AWKFAEENNIDLITV 193

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 49/194 (25%), Positives = 73/194 (37%), Gaps = 37/194 (19%)

Query: 79  ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA------TTLFGKQDEETLQ 132
            S S+ V V G SG +G  +V  LL R    R  +RDP           L     E  L 
Sbjct: 2   GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPK--AETHLT 59

Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSA 189
           + K D  +    D AI +G T V       A P      D   E +    EG+   + S 
Sbjct: 60  LWKADLADEGSFDEAI-KGCTGVFH----VATPMDFESKDPENEVIKPTIEGMLGIMKSC 114

Query: 190 LPS-SLKRIVLVSSVG--------VTKFNELPWSIMNLFGVLK-----Y---KKMGE--- 229
             + +++R+V  SS G        +  ++E  WS M      K     Y   K + E   
Sbjct: 115 AAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAA 174

Query: 230 -DFVQKSGLPFTII 242
             + +++ + F  I
Sbjct: 175 WKYAKENNIDFITI 188

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 58.1 bits (140), Expect = 4e-10
 Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 22/177 (12%)

Query: 76  VTPASSSK-LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---ETL 131
           V+P  S K  VL+AG +G +GQ V  + L  +  + +L R   ++ +          +  
Sbjct: 3   VSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA 62

Query: 132 QVCKGDTRNPKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190
            +  G     + ++  +    +  V+   G  +   +                  LV A+
Sbjct: 63  IIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQ----------------IALVKAM 106

Query: 191 PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
            +       + S      N        L  + + K+     V++SG+PFT I     
Sbjct: 107 KAVGTIKRFLPSEFGHDVNRADPVEPGL-NMYREKRRVRQLVEESGIPFTYICCNSI 162

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 42/204 (20%), Positives = 60/204 (29%), Gaps = 46/204 (22%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQ-VCK 135
               LVLV G +G V   VV  LL    K R   R   K       +  +     +    
Sbjct: 9   PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68

Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW---EGVRN-LVSAL- 190
            D       D  I +G   V       A         N  ++V      G  N L +A  
Sbjct: 69  EDMLKQGAYDEVI-KGAAGVAH----IASV---VSFSNKYDEVVTPAIGGTLNALRAAAA 120

Query: 191 PSSLKRIVLVSSVG----------VTKFNELPWS------------IMNLFGVLKY---K 225
             S+KR VL SS                +E  W+                  +  Y   K
Sbjct: 121 TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASK 180

Query: 226 KMGE----DFVQKSGLPFTIISLC 245
              E     F+ ++   FT+ ++ 
Sbjct: 181 TEAELAAWKFMDENKPHFTLNAVL 204

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 51.5 bits (124), Expect = 7e-08
 Identities = 32/144 (22%), Positives = 48/144 (33%), Gaps = 14/144 (9%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIK----SRLLLRDPEKATTLFG-KQDEETLQVCKGD 137
             V V GG+G +G  ++ SLL          R         + L       E L     D
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61

Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSALPS-S 193
             NP     AI EG   +      TA P      +          +G    L + + S +
Sbjct: 62  LSNPDSFAAAI-EGCVGIFH----TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 194 LKRIVLVSSVGVTKFNELPWSIMN 217
           +KR +  SS     FN     +++
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLD 140

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 16/122 (13%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           +L+AG  G +G  +   L ++  +   L R  +             +Q    D   P  L
Sbjct: 6   ILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTL 56

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
              +      ++ C       +  +  ++       EG+RN +SAL  + L+ +  VSS 
Sbjct: 57  ASIVHLRPEILVYC-----VAASEYSDEH-YRLSYVEGLRNTLSALEGAPLQHVFFVSST 110

Query: 204 GV 205
           GV
Sbjct: 111 GV 112

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 27/127 (21%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           V + G  G VG+ + A L +   +   L+R   K    F                +P + 
Sbjct: 150 VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFW---------------DPLNP 194

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD------WEGVRNLVSALPSSLKRIV 198
              + +G   ++   G   F   R+         +          + L   +  S +   
Sbjct: 195 ASDLLDGADVLVHLAGEPIF--GRF----NDSHKEAIRESRVLPTKFLAELVAESTQCTT 248

Query: 199 LVSSVGV 205
           ++S+  V
Sbjct: 249 MISASAV 255

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 45.5 bits (107), Expect = 6e-06
 Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 21/134 (15%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-----LLRDPEKATTLFGKQDEETLQVCKG 136
           S + L+ G +G +G  +   L   +          + R    A       ++  +   + 
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQC 55

Query: 137 DTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---P 191
           D  +P D    +     VTHV   T       +     N+         RN++ A+    
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSK------MFRNVLDAVIPNC 109

Query: 192 SSLKRIVLVSSVGV 205
            +LK I L +    
Sbjct: 110 PNLKHISLQTGRKH 123

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 35/175 (20%), Positives = 70/175 (40%), Gaps = 29/175 (16%)

Query: 84  LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
           ++LV G SG +G  +V  L  +  K  ++  D         ++D   ++    D  N  +
Sbjct: 1   MILVTGSSGQIGTELVPYLAEKYGKKNVIASD-------IVQRDTGGIKFITLDVSNRDE 53

Query: 144 LDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRN-LVSALPSSLKRI 197
           +D A+    +  +          S +  G+  P    ++    G  N L +A    ++++
Sbjct: 54  IDRAVEKYSIDAIFHL---AGILSAK--GEKDPAL-AYKVNMNGTYNILEAAKQHRVEKV 107

Query: 198 VLVSSVGV-------TKFNEL-PWSIMNLFGVLKYK--KMGEDFVQKSGLPFTII 242
           V+ S++GV        K   +       +FGV K     +G+ + +K GL    +
Sbjct: 108 VIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSL 162

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	250
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.95
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.95
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.95
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.94
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.94
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.94
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.94
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.94
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.94
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.94
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.94
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.94
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.94
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.94
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.94
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.94
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.94
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.94
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.94
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.94
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.94
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.94
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.94
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.94
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.93
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.93
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.93
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.93
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.93
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.93
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.93
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.93
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.93
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.93
1spx_A	278	Short-chain reductase family member (5L265); paral	99.93
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.93
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.93
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.93
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.93
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.93
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.93
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.93
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.93
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.93
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.93
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.93
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.93
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.93
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.93
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.93
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.93
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.93
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.93
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.93
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.92
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.92
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.92
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.92
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.92
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.92
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.92
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.92
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.92
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.92
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.92
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.92
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.92
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.92
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.92
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.92
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.92
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.92
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.92
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.92
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.92
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.91
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.91
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.91
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.91
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.91
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.91
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.91
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.91
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.91
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.91
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.91
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.91
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.91
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.91
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.91
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.91
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.91
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.91
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.91
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.91
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.9
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.9
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.9
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.9
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.9
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.9
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.9
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.9
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.9
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.89
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.89
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.89
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.89
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.89
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.89
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.89
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.89
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.89
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.89
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.88
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.88
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.88
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.88
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.88
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.88
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.88
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.88
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.87
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.87
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.87
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.87
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.86
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.86
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.85
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.85
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.85
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.85
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.85
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.85
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.85
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.85
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.84
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.84
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.84
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.83
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.83
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.83
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.83
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.82
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.82
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.82
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.82
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.8
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.79
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.78
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.75
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.73
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.73
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.65
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.62
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.6
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.34
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.3
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.29
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.06
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.97
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.97
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.94
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.93
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.91
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.9
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.88
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.81
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.8
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.71
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.67
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.66
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.66
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.61
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.57
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.5
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.5
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.5
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.5
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.49
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.48
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.48
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.4
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.39
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.37
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.37
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.35
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.34
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.34
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.32
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.3
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.23
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.23
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.21
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.21
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.19
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.19
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.15
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	98.14
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.1
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.1
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.08
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.08
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.07
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.06
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.05
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.04
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.03
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.01
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.98
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.97
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.96
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.94
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.94
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.93
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.92
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.89
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.88
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.88
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.87
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.85
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.85
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.85
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.8
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.78
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.76
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.75
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.75
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.74
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.73
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.73
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.71
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.7
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.69
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.69
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.69
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.68
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.66
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.66
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.62
1lnq_A	336	MTHK channels, potassium channel related protein;	97.62
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.61
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.61
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.6
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.59
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.59
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.59
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.58
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.58
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.57
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.56
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.56
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.55
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.54
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.54
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.53
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.5
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.5
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.48
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.47
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.47
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.47
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.46
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.45
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.45
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.41
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.41
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.4
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.39
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.39
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.39
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.39
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.38
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.37
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.37
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.37
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.33
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.32
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.31
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.31
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.3
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.29
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.28
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	97.28
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.28
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.28
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.28
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.26
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.25
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.21
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.19
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.17
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	97.13
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.13
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.13
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.13
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.1
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.08
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.07
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.07
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.06
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.05
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.05
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.04
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	97.03
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.01
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.98
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.98
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.97
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.97
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.95
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.95
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.93
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.93
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.91
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.91
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.91
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.9
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.9
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.89
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.89
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.88
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.87
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.87
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	96.86
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.86
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.86
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.84
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.83
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.82
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.81
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.81
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.79
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.74
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.74
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.73
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.72

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.96  E-value=1.5e-29  Score=212.39  Aligned_cols=167  Identities=11%  Similarity=0.052  Sum_probs=133.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++++|++|||||++|||++++++|+++|++|++++|++++++++.+++.  +.++..+++|++|++++++++      +
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999998887765543  457889999999999998754      7


Q ss_pred             CCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||......    .+.++.++.+++|+.|++++.+++     +++.++||++||..+..    +.+....|+
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~----~~~~~~~Y~  158 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR----GGFAGAPYT  158 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----SSSSCHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC----CCCCChHHH
Confidence            89999999999754211    112223456689999999988876     35678999999999873    334455677


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++..+||+|++|+||+|-
T Consensus       159 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~  191 (254)
T 4fn4_A          159 VAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVK  191 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCC
Confidence            6664     445567778899999999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=4.1e-28  Score=201.19  Aligned_cols=157  Identities=22%  Similarity=0.335  Sum_probs=126.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCe-eEEEeeCCCccCcchhhhCCCcEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ..+++|+||||||+||||++++++|+++|++|++++|++++.+++.+    .++ +++.+|++  +++.++ ++++|+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~--~~~~~~-~~~~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLE--EDFSHA-FASIDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTT--SCCGGG-GTTCSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccH--HHHHHH-HcCCCEEE
Confidence            35789999999999999999999999999999999999988776542    367 89999999  777765 78999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~  235 (250)
                      ||||....     .+....+++|+.++.+++++++ .+.++||++||.++..++..+ .+...  |..+|.++|.++++.
T Consensus        90 ~~ag~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~-~~~~~--Y~~sK~~~e~~~~~~  161 (236)
T 3e8x_A           90 FAAGSGPH-----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP-MNMRH--YLVAKRLADDELKRS  161 (236)
T ss_dssp             ECCCCCTT-----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC-GGGHH--HHHHHHHHHHHHHHS
T ss_pred             ECCCCCCC-----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh-hhhhh--HHHHHHHHHHHHHHC
Confidence            99997641     2334566889999999999984 578999999997776543222 33344  457788899999999


Q ss_pred             CCCEEEEecceEEe
Q 025619          236 GLPFTIISLCIYCI  249 (250)
Q Consensus       236 gi~~~~vrPg~v~~  249 (250)
                      |++++++|||++++
T Consensus       162 gi~~~~lrpg~v~~  175 (236)
T 3e8x_A          162 SLDYTIVRPGPLSN  175 (236)
T ss_dssp             SSEEEEEEECSEEC
T ss_pred             CCCEEEEeCCcccC
Confidence            99999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.95  E-value=3.1e-29  Score=210.53  Aligned_cols=166  Identities=11%  Similarity=-0.012  Sum_probs=131.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++||++|||||++|||++++++|+++|++|++++|+++++++..+++.  ..++..+++|++|++++++++      ++
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            6899999999999999999999999999999999999988877655432  457888999999999998754      68


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   .+.++.++.+++|+.|++++.+++     + .+.++||++||..+..    +.+....|+.
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~----~~~~~~~Y~a  161 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA----ARPTVAPYTA  161 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----BCTTCHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC----CCCCchhHHH
Confidence            9999999999865322   112223445689999999888765     2 3568999999999874    3344566766


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||+|++|.||+|.
T Consensus       162 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~  193 (255)
T 4g81_D          162 AKGGIKMLTCSMAAEWAQFNIQTNAIGPGYIL  193 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            654     445567778899999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.95  E-value=9.9e-29  Score=205.49  Aligned_cols=161  Identities=11%  Similarity=0.023  Sum_probs=127.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~  157 (250)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..    ..++..+++|++|++++++++  ++++|+|||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR----HPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC----CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh----cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            58999999999999999999999999999999999987765432    457889999999999988755  789999999


Q ss_pred             cCcCCCcC-CCCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----HHH
Q 025619          158 CTGTTAFP-SRRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKM  227 (250)
Q Consensus       158 ~Ag~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~  227 (250)
                      |||+.... ..+.++.++.+++|+.|+..+.+++    +++.++||++||..+..    +.+....|+.+|.     .+.
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----~~~~~~~Y~asKaav~~ltr~  160 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF----GSADRPAYSASKGAIVQLTRS  160 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS----CCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC----CCCCCHHHHHHHHHHHHHHHH
Confidence            99986421 1111223446689999999888865    33448999999998873    3344567776664     445


Q ss_pred             HHHHHHhcCCCEEEEecceEE
Q 025619          228 GEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       228 ~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +..++..+|||||+|+||++.
T Consensus       161 lA~Ela~~gIrVNaV~PG~i~  181 (242)
T 4b79_A          161 LACEYAAERIRVNAIAPGWID  181 (242)
T ss_dssp             HHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHhhhcCeEEEEEEeCCCC
Confidence            567778899999999999874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.95  E-value=7e-28  Score=201.36  Aligned_cols=161  Identities=13%  Similarity=0.109  Sum_probs=125.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      |+|+||||||++|||++++++|+++|++|++++|++++++++.++  ..++..+++|++|++++++++      ++++|+
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            458999999999999999999999999999999999988877655  457888999999999988754      789999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      ||||||......   .+.++.+..+++|+.|++++.+++    +++.++||++||..+..    +.+....|+.+|.   
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~----~~~~~~~Y~asKaal~  154 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----SEPDSEAYASAKGGIV  154 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS----CCTTCHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc----CCCCCHHHHHHHHHHH
Confidence            999999865321   112223446689999999888866    33458999999998873    3344456776654   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        .+.+..++.+ ||+|++|.||++-
T Consensus       155 ~ltk~lA~ela~-~IrVN~I~PG~i~  179 (247)
T 3ged_A          155 ALTHALAMSLGP-DVLVNCIAPGWIN  179 (247)
T ss_dssp             HHHHHHHHHHTT-TSEEEEEEECSBC
T ss_pred             HHHHHHHHHHCC-CCEEEEEecCcCC
Confidence              3334455555 9999999999874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.95  E-value=3.2e-28  Score=206.15  Aligned_cols=165  Identities=12%  Similarity=0.092  Sum_probs=130.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .++||++|||||++|||++++++|+++|++|++++|+.+++++..+++ +.++..+++|++|++++++++      ++++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999999999999988876665 456788999999999988754      7899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHH--
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~--  224 (250)
                      |+||||||......   .+.++.++.+++|+.|+.++.+++.   +..++||++||..+..    +.+....|+.+|.  
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----~~~~~~~Y~asKaav  180 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----GTPAFSVYAASKAAL  180 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----CCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----CCCCchHHHHHHHHH
Confidence            99999999865322   1112234466889999999999762   1236899999998873    3444566776654  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ---KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ---k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         .+.+..++.++||+|++|.||++.
T Consensus       181 ~~ltr~lA~Ela~~gIrVN~V~PG~i~  207 (273)
T 4fgs_A          181 RSFARNWILDLKDRGIRINTLSPGPTE  207 (273)
T ss_dssp             HHHHHHHHHHTTTSCEEEEEEEECSBC
T ss_pred             HHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence               344556677889999999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.3e-27  Score=199.10  Aligned_cols=164  Identities=12%  Similarity=0.058  Sum_probs=126.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHV  155 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~v  155 (250)
                      +++||++|||||++|||+++++.|+++|++|++++|+.++  .+++.+.  ..++..+++|++|++++++.+ ++++|+|
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKD--GGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999999999998532  2222222  457889999999999988754 5689999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHHHH--
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~--  224 (250)
                      |||||......   .+.++.++.+++|+.|++++.+++     +++ .++||++||..+..    +.+....|+.+|.  
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~----g~~~~~~Y~asKaav  159 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ----GGIRVPSYTAAKHGV  159 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCSSCHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC----CCCCChHHHHHHHHH
Confidence            99999865322   111223446689999999988865     233 58999999998873    3334456776664  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ---KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ---k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         .+.+..++..+||+||+|+||+|.
T Consensus       160 ~~ltr~lA~Ela~~gIrVNaV~PG~i~  186 (247)
T 4hp8_A          160 AGLTKLLANEWAAKGINVNAIAPGYIE  186 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeeCCCC
Confidence               445567788899999999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.95  E-value=6.8e-28  Score=202.91  Aligned_cols=166  Identities=12%  Similarity=0.073  Sum_probs=126.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++.+.+.+.. ...++.++++|++|++++++++      +++
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999876543322111 1457889999999999888654      789


Q ss_pred             CcEEEEcCcCCCcCCCC--CCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          152 VTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~--~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      +|+||||||+......+  .+.....+++|+.|++++.+++    +++.++||++||..+..    +.+....|+.+|. 
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----~~~~~~~Y~asKaa  159 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT----GQGNTSGYCASKGA  159 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH----CCSSCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc----CCCCchHHHHHHHH
Confidence            99999999986432211  1112335588999998888865    34458999999998874    3334456766654 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+.+..++.++||+|++|+||+|.
T Consensus       160 v~~ltr~lA~ela~~gIrVN~V~PG~i~  187 (258)
T 4gkb_A          160 QLALTREWAVALREHGVRVNAVIPAEVM  187 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence                445557778899999999999874

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.94  E-value=1.2e-27  Score=203.74  Aligned_cols=170  Identities=16%  Similarity=0.178  Sum_probs=128.4

Q ss_pred             CCCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           75 KVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        75 ~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      |..+++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++++|++|++++++++      
T Consensus        22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            4445688999999999999999999999999999999999998887766544 457889999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+
T Consensus       101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~  176 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV----AVGGTGAYG  176 (277)
T ss_dssp             HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTBHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----CCCCchhHH
Confidence            568999999999865321   111222345688999999998876     24668999999998873    344456676


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|.     .+.+..++...||++++|+||+|.+
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  210 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDT  210 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccC
Confidence            5554     2223345566899999999999853

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=1.5e-26  Score=192.47  Aligned_cols=163  Identities=28%  Similarity=0.445  Sum_probs=128.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +++|+||||||+|+||++++++|+++  |++|++++|++++.+.+     ..+++++.+|++|.++++++ ++++|+|||
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~   75 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPA-FQGIDALVI   75 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHH-HTTCSEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHHHH-HcCCCEEEE
Confidence            35789999999999999999999999  89999999998876654     34678899999999999875 789999999


Q ss_pred             cCcCCCcC------------CCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          158 CTGTTAFP------------SRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       158 ~Ag~~~~~------------~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |||.....            ...++.....+++|+.++.+++++++ .+.++||++||.+++... .+..+.....|..+
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~-~~~~~~~~~~y~~s  154 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD-HPLNKLGNGNILVW  154 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT-CGGGGGGGCCHHHH
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC-CccccccchhHHHH
Confidence            99976421            11122223456899999999999884 578899999999876422 22222222125577


Q ss_pred             HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |..+|.+++..|++++++|||++++
T Consensus       155 K~~~e~~~~~~~i~~~~vrpg~v~~  179 (253)
T 1xq6_A          155 KRKAEQYLADSGTPYTIIRAGGLLD  179 (253)
T ss_dssp             HHHHHHHHHTSSSCEEEEEECEEEC
T ss_pred             HHHHHHHHHhCCCceEEEecceeec
Confidence            8899999999999999999999986

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.94  E-value=3.4e-27  Score=200.81  Aligned_cols=166  Identities=11%  Similarity=0.064  Sum_probs=127.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++++|++|||||+||||++++++|+++|++|++++|+.++++++.++. ..++.++++|++|.+++++++      +++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDVSSAKDAESMVEKTTAKWGR  101 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999998877765543 457889999999999888654      468


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||.......   +.+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|
T Consensus       102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  177 (277)
T 4dqx_A          102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS----AIADRTAYVASK  177 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc----CCCCChhHHHHH
Confidence            9999999998653211   11112335579999999888876     24567999999998873    344456676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||+|.
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~  207 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTID  207 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence            4     222334455679999999999985

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.94  E-value=1.1e-26  Score=198.71  Aligned_cols=170  Identities=18%  Similarity=0.168  Sum_probs=131.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV  155 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~v  155 (250)
                      +++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++ ..+++++.+|++|.+++++++  ++++|+|
T Consensus        12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            3678999999999999999999999999999999999999888876655 457899999999999998754  3478999


Q ss_pred             EEcCcCCCcCC-CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC---------CCCcchhhHHHHHHH
Q 025619          156 ICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN---------ELPWSIMNLFGVLKY  224 (250)
Q Consensus       156 i~~Ag~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~---------~~~~~~~~~y~~~k~  224 (250)
                      |||||...... ...+..+..+++|+.|+.++++++. ...++||++||..++...         ..++.+...|+.+|.
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~  170 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL  170 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence            99999875321 2233445567999999999999874 445699999999887531         123455566775554


Q ss_pred             H-----HHHHHHHHhcC--CCEEEEecceEE
Q 025619          225 K-----KMGEDFVQKSG--LPFTIISLCIYC  248 (250)
Q Consensus       225 k-----~~~e~~~~~~g--i~~~~vrPg~v~  248 (250)
                      .     +.+..++...|  |++++|+||+|.
T Consensus       171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~  201 (291)
T 3rd5_A          171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSH  201 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEECCSGGG
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCc
Confidence            1     22224445556  999999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.94  E-value=5.3e-27  Score=198.24  Aligned_cols=167  Identities=16%  Similarity=0.111  Sum_probs=127.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++    ...++.++.+|++|.+++++++     
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999998876654432    2335889999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                       ++++|+||||||......   .+.++....+++|+.|+.++++++     +.+.++||++||..++.    +.+....|
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  159 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ----PEPHMVAT  159 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS----CCTTBHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC----CCCCchhh
Confidence             578999999999864321   111122345688999999999876     24568999999998873    33445666


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|.     .+.+..++...||++++|+||++.
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  193 (265)
T 3lf2_A          160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVE  193 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence            65553     223334556679999999999885

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=2e-27  Score=199.88  Aligned_cols=166  Identities=13%  Similarity=0.069  Sum_probs=127.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999999988776554332  457889999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCCC--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      ++|+||||||.......  ..++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  164 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN----TNVRMASYGSSK  164 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC----CCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC----CCCCchHHHHHH
Confidence            89999999998653221  11122345688999999999876     34668999999998873    334456676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++.
T Consensus       165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~  194 (256)
T 3gaf_A          165 AAVNHLTRNIAFDVGPMGIRVNAIAPGAIK  194 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEEcccc
Confidence            4     222334455679999999999985

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=2.4e-27  Score=200.08  Aligned_cols=168  Identities=17%  Similarity=0.139  Sum_probs=126.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++++|++|++++++++      +
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999999988776544332   257889999999999988654      5


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   +.+..+..+++|+.|+.++++++     +.+.++||++||..+..   .+.+....|+.
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---~~~~~~~~Y~a  163 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI---TGYPGWSHYGA  163 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT---BCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc---CCCCCChhhHH
Confidence            689999999998653211   11122335688999999998876     23678999999987742   12334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||++.+
T Consensus       164 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t  196 (262)
T 3pk0_A          164 TKAAQLGFMRTAAIELAPHKITVNAIMPGNIMT  196 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcC
Confidence            543     2223344556899999999999864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=1.2e-26  Score=190.92  Aligned_cols=153  Identities=19%  Similarity=0.261  Sum_probs=121.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+||||||+|+||++++++|+++|++|++++|++++.+.+     ..+++++.+|++|.++++++ ++++|+|||+||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVCEV-CKGADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHHHH-HTTCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHHHH-hcCCCEEEEeCcC
Confidence            47999999999999999999999999999999998765432     25789999999999999975 7899999999986


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC------CCCcchhhHHHHHHHHHHHH---HH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN------ELPWSIMNLFGVLKYKKMGE---DF  231 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~------~~~~~~~~~y~~~k~k~~~e---~~  231 (250)
                      ..       .....+++|+.++.+++++++ .+.++||++||.+++...      +.+..+...|+.  +|...|   +.
T Consensus        78 ~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~--sK~~~e~~~~~  148 (227)
T 3dhn_A           78 GW-------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG--VKALGEFYLNF  148 (227)
T ss_dssp             -------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH--HHHHHHHHHHT
T ss_pred             CC-------CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHH--HHHHHHHHHHH
Confidence            52       112367899999999999984 678899999999876532      223345567664  455555   44


Q ss_pred             HH-hcCCCEEEEecceEEe
Q 025619          232 VQ-KSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~-~~gi~~~~vrPg~v~~  249 (250)
                      +. +.|++++++|||++||
T Consensus       149 ~~~~~~~~~~ilrp~~v~g  167 (227)
T 3dhn_A          149 LMKEKEIDWVFFSPAADMR  167 (227)
T ss_dssp             GGGCCSSEEEEEECCSEEE
T ss_pred             HhhccCccEEEEeCCcccC
Confidence            44 6799999999999987

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=3.1e-27  Score=198.91  Aligned_cols=166  Identities=12%  Similarity=0.102  Sum_probs=126.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++ ..++.++++|++|++++++++      ++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999998887765544 356789999999999888654      4589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   .+++..+..+++|+.|+.++++++     +.+ .++||++||..++.    +.+....|+.+|
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  159 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR----GEALVAIYCATK  159 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc----CCCCChHHHHHH
Confidence            99999999864321   111222345579999999999876     223 57999999998874    334456666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...||++++|+||++.+
T Consensus       160 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t  190 (259)
T 4e6p_A          160 AAVISLTQSAGLDLIKHRINVNAIAPGVVDG  190 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEEECCCcc
Confidence            3     1222344556799999999999864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.94  E-value=3.2e-27  Score=199.17  Aligned_cols=167  Identities=15%  Similarity=0.129  Sum_probs=124.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.   ..++.++++|++|++++++++      +
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887766543321   346888999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..+..+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~  159 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP----LWYEPIYNV  159 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC----CCCcchHHH
Confidence            689999999998642211   11112345588999999988876     246789999999988843    233456665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|..     +.+..++...||++++|+||++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  192 (263)
T 3ai3_A          160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILT  192 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence            5431     122234456799999999999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.94  E-value=4e-27  Score=199.65  Aligned_cols=166  Identities=13%  Similarity=0.074  Sum_probs=128.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++ ..++.++.+|++|++++++++      ++++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999999988877765544 457889999999999988654      5689


Q ss_pred             cEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      |+||||||.......     ..+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  162 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA----AYDMSTAYACT  162 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----BCSSCHHHHHH
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC----CCCCChHHHHH
Confidence            999999998632111     11122345689999999999876     34678999999998874    33445666655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.     .+.+..++..+||++++|+||++.+
T Consensus       163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t  194 (271)
T 3tzq_B          163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRT  194 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcC
Confidence            54     2223344556899999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.94  E-value=2.2e-27  Score=200.92  Aligned_cols=166  Identities=14%  Similarity=0.124  Sum_probs=122.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++++++.++. ..++.++.+|++|++++++++      +++
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999999999999998887765444 457889999999999988654      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|
T Consensus       102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asK  177 (266)
T 3grp_A          102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV----GNPGQTNYCAAK  177 (266)
T ss_dssp             CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------CHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC----CCCCchhHHHHH
Confidence            999999999864221   111122345689999988887765     24668999999988873    334456676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++.
T Consensus       178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~  207 (266)
T 3grp_A          178 AGLIGFSKALAQEIASRNITVNCIAPGFIK  207 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCcCC
Confidence            4     223334556679999999999885

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.94  E-value=4.8e-27  Score=198.77  Aligned_cols=162  Identities=19%  Similarity=0.185  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++++.    ..++.++.+|++|.+++++++      ++++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN----LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC----CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh----cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            467899999999999999999999999999999999998877654    347888999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.........   +..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~Y~asK~  164 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----TFPDHAAYCGTKF  164 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC----CCCCCchHHHHHH
Confidence            99999999875322111   112335689999999988765     34678999999998874    3344566765554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||++++|+||+|.
T Consensus       165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (266)
T 3p19_A          165 AVHAISENVREEVAASNVRVMTIAPSAVK  193 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCccc
Confidence                 222334556689999999999985

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.94  E-value=3.6e-27  Score=200.78  Aligned_cols=167  Identities=16%  Similarity=0.136  Sum_probs=124.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------hhhHhhhhCcC--CCCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~  144 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+            .+.+++..+.+  ...++.++++|++|++++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            5789999999999999999999999999999999997            34444332221  145788999999999998


Q ss_pred             chhh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCC
Q 025619          145 DPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNE  210 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~  210 (250)
                      ++++      ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.   
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  163 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS---  163 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS---
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC---
Confidence            8654      568999999999865321   111122345689999999999875     34668999999998874   


Q ss_pred             CCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          211 LPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       211 ~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                       +......|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       164 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t  206 (281)
T 3s55_A          164 -ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIET  206 (281)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence             3344556665553     2223344556799999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=5e-27  Score=196.41  Aligned_cols=165  Identities=17%  Similarity=0.194  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887776544332  346888999999999888654      46


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   +.++.+..+++|+.|+.++++++     +.+ ++||++||..++.    +.+....|+.+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----~~~~~~~Y~as  158 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV----NVRNAAVYQAT  158 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC----CCCCCcHHHHH
Confidence            89999999998642211   11112335688999999998876     235 8999999998874    33344566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||++.
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  189 (247)
T 2jah_A          159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTD  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCCCC
Confidence            53     223345566789999999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.94  E-value=1.9e-27  Score=199.12  Aligned_cols=165  Identities=18%  Similarity=0.147  Sum_probs=127.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+.+ ..+...+++|++|++++++++      ++++
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999999998877765443 235678999999999988654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~  160 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM----GNAGQANYAAAKA  160 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----CCCCChHHHHHHH
Confidence            99999999865321   111222445689999999999876     24678999999988874    3344566765554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||++++|+||++.
T Consensus       161 a~~~l~~~la~e~~~~gi~vn~v~PG~v~  189 (248)
T 3op4_A          161 GVIGFTKSMAREVASRGVTVNTVAPGFIE  189 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEeeCCCC
Confidence                 223334556689999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.94  E-value=2.5e-27  Score=201.76  Aligned_cols=167  Identities=17%  Similarity=0.226  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+++++++..+++.     ..++.++++|++|++++++++     
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999987766544322     126788999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||......    .+.+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~  163 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN----THRWFGA  163 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----CCTTCTH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC----CCCCChh
Confidence             568999999999743211    111122345688999999999876     24567999999998874    3334456


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|.     .+.+..++...||++++|+||++.+
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t  199 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRT  199 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcC
Confidence            665543     1222344556789999999999853

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.94  E-value=1.7e-26  Score=189.34  Aligned_cols=149  Identities=19%  Similarity=0.305  Sum_probs=123.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhhhCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      |+||||||+|+||++++++|+++|++|++++|++++.+..      .+++++.+|++| .++++++ ++++|+||||||.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~-~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQ-LHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTT-TTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHHH-HcCCCEEEECCcC
Confidence            3799999999999999999999999999999998765432      578999999999 8899875 7899999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC---CcchhhHHHHHHHHHHHHHHH-HhcC
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL---PWSIMNLFGVLKYKKMGEDFV-QKSG  236 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~---~~~~~~~y~~~k~k~~~e~~~-~~~g  236 (250)
                      ..         ...+++|+.++.+++++++ .+.++||++||..++.....   +..+...  |..+|..+|+++ +..|
T Consensus        74 ~~---------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~--Y~~sK~~~e~~~~~~~~  142 (219)
T 3dqp_A           74 GG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKD--YYIAKHFADLYLTKETN  142 (219)
T ss_dssp             TT---------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHH--HHHHHHHHHHHHHHSCC
T ss_pred             CC---------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccH--HHHHHHHHHHHHHhccC
Confidence            64         2256899999999999985 67889999999888753211   1112333  557788899998 7889


Q ss_pred             CCEEEEecceEEe
Q 025619          237 LPFTIISLCIYCI  249 (250)
Q Consensus       237 i~~~~vrPg~v~~  249 (250)
                      ++++++|||++++
T Consensus       143 i~~~ilrp~~v~g  155 (219)
T 3dqp_A          143 LDYTIIQPGALTE  155 (219)
T ss_dssp             CEEEEEEECSEEC
T ss_pred             CcEEEEeCceEec
Confidence            9999999999986

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=4.6e-27  Score=195.35  Aligned_cols=163  Identities=14%  Similarity=0.063  Sum_probs=121.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|++|||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++.+|++|.+++++++      ++++|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-GNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            5789999999999999999999999999999999998887765544 236889999999999888654      468999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      ||||||......   ...+..+..+++|+.|+.++++++    ++..++||++||..++.    +.+....|+.+|.   
T Consensus        81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asKaa~~  156 (235)
T 3l6e_A           81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV----GKANESLYCASKWGMR  156 (235)
T ss_dssp             EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS----SCSSHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC----CCCCCcHHHHHHHHHH
Confidence            999999864221   111122345688999999888876    33334999999988874    3344566665554   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        .+.+..++...||++++|+||++.
T Consensus       157 ~~~~~la~e~~~~gi~v~~v~PG~v~  182 (235)
T 3l6e_A          157 GFLESLRAELKDSPLRLVNLYPSGIR  182 (235)
T ss_dssp             HHHHHHHHHTTTSSEEEEEEEEEEEC
T ss_pred             HHHHHHHHHhhccCCEEEEEeCCCcc
Confidence              122234455679999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.94  E-value=5.4e-27  Score=199.27  Aligned_cols=170  Identities=15%  Similarity=0.108  Sum_probs=127.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------hhhHhhhhCcCC--CCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~------------~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~  144 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+            .+++++..+.+.  ..++.++++|++|++++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            5789999999999999999999999999999999987            555444332221  45788999999999998


Q ss_pred             chhh------hCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCC
Q 025619          145 DPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~  212 (250)
                      ++++      ++++|+||||||...... ..++.+..+++|+.|+.++++++     +.+ .++||++||..++.....+
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA  168 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence            8654      468999999999875322 22233456689999999999876     222 5799999999887544333


Q ss_pred             cchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       213 ~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+....|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T  210 (278)
T 3sx2_A          169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVET  210 (278)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSS
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccC
Confidence            355566665553     1223344566799999999999853

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=6.6e-27  Score=196.48  Aligned_cols=166  Identities=14%  Similarity=0.128  Sum_probs=124.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++ ..++.++.+|++|++++++++      ++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999998877765544 346788999999999888653      4589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~  156 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----GLALTSSYGASKW  156 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----CCCCchhHHHHHH
Confidence            99999999764211   111122345688999998766654     24678999999998874    2334456665543


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                           .+.+..++...||++++|+||++.+
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  186 (254)
T 1hdc_A          157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYT  186 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccCcC
Confidence                 1222344556799999999999864

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.94  E-value=6.9e-27  Score=200.54  Aligned_cols=168  Identities=17%  Similarity=0.172  Sum_probs=127.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++++|++|++++++++      +
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999988776654433   247889999999999887654      5


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.++||++||..+...   +.+....|+.
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~---~~~~~~~Y~a  194 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT---GYPGWSHYGA  194 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB---BCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC---CCCCCHHHHH
Confidence            789999999998653211   11122345689999999999987     346789999999887411   2233456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||+|.+
T Consensus       195 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  227 (293)
T 3rih_A          195 SKAAQLGFMRTAAIELAPRGVTVNAILPGNILT  227 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcC
Confidence            543     2223344556799999999999864

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.94  E-value=3.2e-27  Score=198.61  Aligned_cols=166  Identities=15%  Similarity=0.126  Sum_probs=127.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++ ..++.++++|++|++++++++      ++++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            578899999999999999999999999999999999998887766544 357889999999999887643      5789


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHH--
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~--  224 (250)
                      |+||||||......   ...++.+..+++|+.|+.++++++.+   ..++||++||..++.    +.+....|+.+|.  
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKaa~  159 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG----GHPGMSVYSASKAAL  159 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS----BCTTBHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC----CCCCchHHHHHHHHH
Confidence            99999999865321   11122344568999999999998732   246999999998874    3344566765554  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 ---KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 ---k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         .+.+..++...||++++|+||++.+
T Consensus       160 ~~~~~~la~e~~~~gi~vn~v~PG~v~T  187 (255)
T 4eso_A          160 VSFASVLAAELLPRGIRVNSVSPGFIDT  187 (255)
T ss_dssp             HHHHHHHHHHTGGGTCEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHhhhCcEEEEEecCcccC
Confidence               2223344556799999999999853

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=4.1e-27  Score=198.98  Aligned_cols=154  Identities=20%  Similarity=0.246  Sum_probs=123.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +||+||||||+||||++++++|+++|++|++++|++++.+       ..+++++.+|++|.++++++ +.++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNAM-VAGCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHH-HTTCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHH-HcCCCEEEECCC
Confidence            5689999999999999999999999999999999875533       35788999999999999975 789999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc--------CCCCcchhhHHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF--------NELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~--------~~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      ...     ..+.+..+++|+.|+.+++++++ .+.++||++||..+++.        ++.+..+...|+.  +|...|.+
T Consensus        74 ~~~-----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~--sK~~~e~~  146 (267)
T 3rft_A           74 ISV-----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGV--SKCFGENL  146 (267)
T ss_dssp             CCS-----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHH--HHHHHHHH
T ss_pred             CcC-----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHH--HHHHHHHH
Confidence            842     12334567899999999999884 67889999999998852        2234455566664  45555544


Q ss_pred             H----HhcCCCEEEEecceEEe
Q 025619          232 V----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~----~~~gi~~~~vrPg~v~~  249 (250)
                      .    ++.|+++++||||.|++
T Consensus       147 ~~~~a~~~g~~~~~vr~~~v~~  168 (267)
T 3rft_A          147 ARMYFDKFGQETALVRIGSCTP  168 (267)
T ss_dssp             HHHHHHHHCCCEEEEEECBCSS
T ss_pred             HHHHHHHhCCeEEEEEeecccC
Confidence            3    46799999999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=5.2e-27  Score=198.34  Aligned_cols=167  Identities=13%  Similarity=0.124  Sum_probs=123.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.    ..++.++.+|++|++++++++      
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999887765543321    346888999999999888654      


Q ss_pred             hCCCcEEEEcCcCCCc-CC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 FEGVTHVICCTGTTAF-PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~-~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++++|+||||||.... ..   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  165 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR----GIGNQSGY  165 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----BCSSBHHH
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc----CCCCCccH
Confidence            4689999999997642 11   111122345688999988777654     34678999999998873    23344566


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|.     .+.+..++...||++++|+||++.+
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  200 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT  200 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcC
Confidence            65543     1222344556799999999998853

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.94  E-value=8.5e-27  Score=196.11  Aligned_cols=166  Identities=17%  Similarity=0.107  Sum_probs=125.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999999999999999999999999988777654433  357889999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   .+.+..+..+++|+.|+.++++++     + .+.++||++||..++.    +.+....|+.
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  158 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD----AGPGVIHSAA  158 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS----CCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc----CCCCcHHHHH
Confidence            8999999999754211   111122345689999999999876     2 3468999999998874    3334456665


Q ss_pred             HHH-----HHHHHHHHH-hcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQ-KSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~-~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++. +.||++++|+||++.
T Consensus       159 sKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~  191 (257)
T 3imf_A          159 AKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIE  191 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBS
T ss_pred             HHHHHHHHHHHHHHHhccccCeEEEEEEECCCc
Confidence            553     122233443 669999999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.94  E-value=6.7e-27  Score=197.12  Aligned_cols=164  Identities=16%  Similarity=0.133  Sum_probs=123.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+++.+++. .++.++++|++|++++++++      ++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999988776544332 24788999999999888654      4589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+| 
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK-  157 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG----TVACHGYTATK-  157 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----CTTBHHHHHHH-
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC----CCCchhHHHHH-
Confidence            99999999864321   111122345688999998777654     246789999999988742    23345666544 


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                       ..++       .++...||++++|+||++++
T Consensus       158 -~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  188 (260)
T 1nff_A          158 -FAVRGLTKSTALELGPSGIRVNSIHPGLVKT  188 (260)
T ss_dssp             -HHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             -HHHHHHHHHHHHHhCccCcEEEEEEeCCCCC
Confidence             4333       34455799999999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=5.6e-27  Score=197.98  Aligned_cols=167  Identities=12%  Similarity=0.085  Sum_probs=126.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999988777654332  457889999999999988654      56


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......    .+.+.....+++|+.|+.++++++    ++..++||++||..++.    +......|+.+
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  163 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH----SQAKYGAYKMA  163 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC----CCTTCHHHHHH
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc----CCCccHHHHHH
Confidence            8999999998753211    111222345688999999999876    22238999999998874    33444566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.     .+.+..++...||++++|+||+|.+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t  195 (264)
T 3ucx_A          164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWG  195 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBS
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccc
Confidence            53     2223345566899999999999853

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=4.3e-27  Score=200.10  Aligned_cols=166  Identities=17%  Similarity=0.161  Sum_probs=123.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+.. ..+++++.+|++|.+++++++      ++++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            356799999999999999999999999999999999998877765443 457899999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...++....+++|+.|+.++++++    + .+.++||++||..++.    +..+...|+.+|.
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK~  156 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL----SFAGFSAYSATKA  156 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----CCCCchHHHHHHH
Confidence            99999999864321   111122345689999966666654    3 4678999999998873    3445567775553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     +.+..++...||++++|+||++.+
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  186 (281)
T 3m1a_A          157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRT  186 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccc
Confidence            1     122233455799999999998853

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-26  Score=196.31  Aligned_cols=167  Identities=17%  Similarity=0.141  Sum_probs=123.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|++++++++.+++   ...++.++.+|++|++++++++      
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988776554332   1346788999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCc-ccccCCCCcchhhHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVG-VTKFNELPWSIMNLF  219 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~-~~~~~~~~~~~~~~y  219 (250)
                      ++++|+||||||......   .+.+..+..+++|+.|+.++++++     +.+.++||++||.. +..    +......|
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----~~~~~~~Y  172 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----TMPNISAY  172 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----CSSSCHHH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc----CCCCChhH
Confidence            468999999999864221   111112345588999999998865     34678999999987 542    23344566


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|..     +.+..++...||++++|+||++.
T Consensus       173 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  206 (267)
T 1vl8_A          173 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR  206 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence            654431     22234445679999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.94  E-value=5e-27  Score=198.57  Aligned_cols=166  Identities=14%  Similarity=0.109  Sum_probs=126.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++   ...++.++++|++|++++++++      +
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999998877654433   1457889999999999988654      5


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||......   .+.+..+..+++|+.|+.++++++     +.+ .++||++||..++.    +.+....|+
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  172 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA----PLPDHYAYC  172 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc----CCCCChHHH
Confidence            68999999999865321   111122345688999999998876     223 57999999998874    334455666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||+|.
T Consensus       173 asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~  205 (266)
T 4egf_A          173 TSKAGLVMATKVLARELGPHGIRANSVCPTVVL  205 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence            5553     222334556679999999999985

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.94  E-value=8.1e-27  Score=196.43  Aligned_cols=164  Identities=15%  Similarity=0.146  Sum_probs=123.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F-  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~-  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++++++      + 
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   85 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887766543321  346788999999999888654      3 


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...++....+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.
T Consensus        86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  161 (260)
T 2ae2_A           86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----AVPYEAVYGA  161 (260)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----CCCCcchHHH
Confidence            78999999999764211   111122345688999999998876     34678999999988873    2334456665


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|  ..++       .++...||++++|+||++.
T Consensus       162 sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  193 (260)
T 2ae2_A          162 TK--GAMDQLTRCLAFEWAKDNIRVNGVGPGVIA  193 (260)
T ss_dssp             HH--HHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred             HH--HHHHHHHHHHHHHHhhcCcEEEEEecCCCC
Confidence            44  4333       3345569999999999875

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.94  E-value=2.3e-27  Score=201.23  Aligned_cols=168  Identities=13%  Similarity=0.066  Sum_probs=127.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|++++++++      +
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            35789999999999999999999999999999999999988776654432  457888999999999988654      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..+..    +......|+.
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~----~~~~~~~Y~a  177 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL----ARATVAPYTV  177 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----BCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC----CCCCchhHHH
Confidence            68999999999865321   111222345689999999998866     24668999999988873    3344566765


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||+|.+
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  210 (271)
T 4ibo_A          178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLT  210 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeC
Confidence            553     2223344566899999999999853

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.94  E-value=1.1e-26  Score=195.49  Aligned_cols=166  Identities=12%  Similarity=0.026  Sum_probs=125.7

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhhhC---cCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      +++||++|||||+|  |||++++++|+++|++|++++|+++.++++.+   +....++.++++|++|++++++++     
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999876  99999999999999999999999877666543   333457889999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCC----CCCcceehHHHHHHHHHHc---cCCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDG----DNTPEKVDWEGVRNLVSAL---PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~----~~~~~~~N~~g~~~l~~a~---~~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|++|||||......   ...+.    ....+++|+.++..+.+++   .+..++||++||..+..    +.+...
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~----~~~~~~  158 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF----AVQNYN  158 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS----CCTTTH
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc----Ccccch
Confidence             689999999999764211   00111    1223467888888887765   23457999999998873    344556


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++..+||+|++|+||++-
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~  194 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIR  194 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCC
Confidence            7776654     344556777899999999999874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.94  E-value=8.7e-27  Score=198.91  Aligned_cols=168  Identities=14%  Similarity=0.085  Sum_probs=124.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999988777655443  357889999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCC--C--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS--R--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~--~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......  .  +.++.+..+++|+.|+.++++++     +.+.++||++||..+....  +.+....|+.
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~--~~~~~~~Y~a  182 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF--TTPGATAYTA  182 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--CSTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC--CCCCchHHHH
Confidence            8999999999854211  1  11112345689999999999876     2467899999998886321  2234456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       183 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  214 (283)
T 3v8b_A          183 TKAAQVAIVQQLALELGKHHIRVNAVCPGAIE  214 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECSBS
T ss_pred             HHHHHHHHHHHHHHHhCccCcEEEEEEeCCCc
Confidence            543     122234445679999999999874

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.94  E-value=8e-27  Score=196.81  Aligned_cols=163  Identities=14%  Similarity=0.054  Sum_probs=122.0

Q ss_pred             CCCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           75 KVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        75 ~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      |..++++||++|||||++|||++++++|+++|++|++++|+.++.        ......+++|++|++++++++      
T Consensus         4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            444578999999999999999999999999999999999975421        123347899999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|+||||||......     .+.++.++.+++|+.|+.++.+++     +++.++||++||..+..+..   .....
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~---~~~~~  152 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP---ESTTA  152 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TTCHH
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC---CccHH
Confidence            689999999999754221     111222445689999999888865     35678999999988873211   12345


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++..+||+|++|+||+|-
T Consensus       153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~  187 (261)
T 4h15_A          153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIE  187 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcC
Confidence            655553     345556778899999999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.5e-27  Score=197.12  Aligned_cols=166  Identities=18%  Similarity=0.174  Sum_probs=119.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++ ..++.++++|++|++++++++      ++++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568899999999999999999999999999999999988777665544 456889999999999888654      4699


Q ss_pred             cEEEEcCcCCCcCC-------CCCCCCCCcceehHHHHHHHHHHc----cC-------CCCeEEEEccCcccccCCCCcc
Q 025619          153 THVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSAL----PS-------SLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       153 D~vi~~Ag~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~a~----~~-------~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                      |+||||||......       ..++..+..+++|+.|+.++++++    ++       +.++||++||..++.+    ..
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~----~~  158 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG----QI  158 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----CT
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC----CC
Confidence            99999999874221       111122345688999999999876    22       4578999999988742    33


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ....|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       159 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t  198 (257)
T 3tpc_A          159 GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDT  198 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCC
Confidence            4456665553     2223345566899999999999853

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.94  E-value=5.9e-27  Score=199.74  Aligned_cols=168  Identities=14%  Similarity=0.136  Sum_probs=125.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++| +.++++++.+++   ...++.++.+|++|.+++++++     
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999 555555543322   2457888999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                       ++++|+||||||......   .+.+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y  176 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV----ASPFKSAY  176 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHH
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc----CCCCchHH
Confidence             468999999999865322   111122345689999999999876     34668999999998873    33444567


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|.     .+.+..++...||++++|+||+|.+
T Consensus       177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  211 (281)
T 3v2h_A          177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLT  211 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcC
Confidence            65554     2223344566799999999999853

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.94  E-value=4.6e-27  Score=196.69  Aligned_cols=165  Identities=14%  Similarity=0.118  Sum_probs=127.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++ ..++.++++|++|++++++++      ++++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            578999999999999999999999999999999999998887765544 457889999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CC-CCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   .+.++.+..+++|+.|+.++++++    + .+ .++||++||..++.    +.+....|+.+|
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  157 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA----GTPNMAAYVAAK  157 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----TCTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc----CCCCchhhHHHH
Confidence            99999999864321   111222445689999999998874    2 34 68999999988874    233445666555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||+|.
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~  187 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIE  187 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence            3     223334556689999999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=2.2e-26  Score=192.32  Aligned_cols=162  Identities=12%  Similarity=0.034  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++++.+++   ++.++++|++|++++++++      ++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999998877765443   3788999999999887654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||.. ..    +.+....|+.+|.
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~----~~~~~~~Y~asK~  153 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL----GNLGQANYAASMA  153 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG----CCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc----CCCCchhHHHHHH
Confidence            99999999764211   111122345688999999998866     24678999999988 42    1223355665543


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||++++|+||++.
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~  182 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCc
Confidence                 223334556689999999999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=3.5e-27  Score=200.02  Aligned_cols=166  Identities=14%  Similarity=0.083  Sum_probs=126.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++..+.+|++|.+++++++      ++
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999999987776544332  346788999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  180 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----GNPGQVNYAAA  180 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----CCCCchhHHHH
Confidence            89999999998653211   11122345689999999999876     24668999999988874    23344566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||+|.
T Consensus       181 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  211 (270)
T 3ftp_A          181 KAGVAGMTRALAREIGSRGITVNCVAPGFID  211 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence            54     223334556679999999999985

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.94  E-value=1.5e-26  Score=193.65  Aligned_cols=166  Identities=13%  Similarity=0.158  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++ +++++..+.. ..++.++++|++|++++++++      +++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999998 6655422222 356888999999999888653      578


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  158 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----KIEAYTHYISTK  158 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----CCSSCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----CCCCchhHHHHH
Confidence            999999999864221   111122345688999988888874     24678999999998874    233445666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...||++++|+||++.+
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  189 (249)
T 2ew8_A          159 AANIGFTRALASDLGKDGITVNAIAPSLVRT  189 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC--
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcCcC
Confidence            3     1222344556799999999999853

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=2.4e-26  Score=193.81  Aligned_cols=165  Identities=14%  Similarity=0.107  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++. .++.++++|++|++++++++      ++++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999999999988777655442 26788999999999888654      4589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   ...+..+..+++|+.|+.++++++     +.+ .++||++||..++.+    .+....|+.+|
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK  163 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG----APLLAHYSASK  163 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC----CTTCHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC----CCCchhHHHHH
Confidence            99999999764211   111122345688999999998876     234 689999999888732    23345666554


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..     +.+..++...||++++|+||++.
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  193 (263)
T 3ak4_A          164 FAVFGWTQALAREMAPKNIRVNCVCPGFVK  193 (263)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBT
T ss_pred             HHHHHHHHHHHHHHhHcCeEEEEEeccccc
Confidence            31     12223445579999999999885

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.94  E-value=7.3e-27  Score=198.92  Aligned_cols=166  Identities=16%  Similarity=0.144  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|.+++++++      ++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999999988776544332  457889999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-c------CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-P------SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-~------~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++|+||||||.......   +.+..+..+++|+.|+.++++++ +      .+.++||++||..++.    +......|+
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~----~~~~~~~Y~  176 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ----GVMYAAPYT  176 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc----CCCCChhHH
Confidence            89999999998653211   11112335579999999998865 2      3568999999998873    334455666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||+|.
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  209 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVE  209 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCccc
Confidence            5553     222334455689999999999985

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.2e-26  Score=192.21  Aligned_cols=163  Identities=13%  Similarity=0.079  Sum_probs=123.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++. ++  .++.++++|++|+++++++.  ++++|+||
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY--PGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS--TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc--cCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            467899999999999999999999999999999999998877665 33  36888999999999887543  57899999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHH
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~  228 (250)
                      ||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++....   .....|+.+|  .++
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~Y~~sK--~a~  154 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---VNRCVYSTTK--AAV  154 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---TTBHHHHHHH--HHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---CCCccHHHHH--HHH
Confidence            9999864321   111112335588999999998876     24678999999988774321   1345566544  433


Q ss_pred             H-------HHHHhcCCCEEEEecceEEe
Q 025619          229 E-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       229 e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +       .++...||++++|+||++++
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t  182 (246)
T 2ag5_A          155 IGLTKSVAADFIQQGIRCNCVCPGTVDT  182 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESCEEC
T ss_pred             HHHHHHHHHHhhhcCcEEEEEeeCcCcC
Confidence            3       33455799999999999874

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.93  E-value=7.8e-27  Score=196.58  Aligned_cols=164  Identities=15%  Similarity=0.106  Sum_probs=123.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|++|||||+||||++++++|+++|++|+++ +|+.++++++.+++.  ..++.++.+|++|++++++++      +++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 888877766544332  457889999999999988654      578


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .+.+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  158 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR----YLENYTTVGVSK  158 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS----BCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC----CCCCcHHHHHHH
Confidence            999999999754221   111122335689999999998876     34568999999998873    344456676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++.
T Consensus       159 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~  188 (258)
T 3oid_A          159 AALEALTRYLAVELSPKQIIVNAVSGGAID  188 (258)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            4     122234455679999999999985

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=5.1e-27  Score=200.05  Aligned_cols=168  Identities=11%  Similarity=0.054  Sum_probs=127.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5788999999999999999999999999999999999988777655443  457888999999999888654      56


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......    .+.+..+..+++|+.|+.++++++     +.+.++||++||..++..   +.+....|+.
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~~Y~a  161 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA---GFAGVAPYAA  161 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB---CCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC---CCCCchhHHH
Confidence            8999999999763211    111223446689999999999876     245679999999888721   2334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||+|.+
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T  194 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDT  194 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSS
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCC
Confidence            553     2223344556799999999998853

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=6.6e-27  Score=198.23  Aligned_cols=170  Identities=14%  Similarity=0.130  Sum_probs=125.0

Q ss_pred             CCCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh---
Q 025619           75 KVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        75 ~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      |..+++++|++|||||+||||++++++|+++|++|++++| +.+..+++.+++.  ..++.++++|++|.+++++++   
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4445678999999999999999999999999999999988 5555555433221  457888999999999988654   


Q ss_pred             ---hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 ---FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                         ++++|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.....
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  176 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM----GNPGQA  176 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH----CCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC----CCCCch
Confidence               568999999999875321   111222445688999999999876     24678999999988874    233445


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       177 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  212 (269)
T 4dmm_A          177 NYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIA  212 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCc
Confidence            6665554     222334556689999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-26  Score=196.45  Aligned_cols=167  Identities=14%  Similarity=0.130  Sum_probs=124.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F-  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~-  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++++++      + 
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887766543321  346888999999999888654      3 


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  173 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----ALPSVSLYSA  173 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC----CCCCcchhHH
Confidence            789999999998642211   11112334578999999999876     24568999999998874    2334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||++.+
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  206 (273)
T 1ae1_A          174 SKGAINQMTKSLACEWAKDNIRVNSVAPGVILT  206 (273)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcC
Confidence            543     1222344556799999999999864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=2.6e-26  Score=200.27  Aligned_cols=167  Identities=17%  Similarity=0.140  Sum_probs=122.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChh--hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~  152 (250)
                      ++++|+||||||+|+||++++++|+++|  ++|++++|...  ..+.+.......+++++.+|++|.++++++ +.  ++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~   99 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHV-IKERDV   99 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHHHTC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHH-HhhcCC
Confidence            4567899999999999999999999999  67888877642  222222222246899999999999999876 45  49


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--------CCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k  223 (250)
                      |+|||+||..... ..+.+....+++|+.|+.+++++++ .++++||++||.++|+..        +.+..+.+.|+  .
T Consensus       100 d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~--~  176 (346)
T 4egb_A          100 QVIVNFAAESHVD-RSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYS--S  176 (346)
T ss_dssp             CEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHH--H
T ss_pred             CEEEECCcccchh-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhH--H
Confidence            9999999986532 2334556677999999999999884 678999999999988743        23344456666  5


Q ss_pred             HHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          224 YKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +|..+|++++    +.|++++++||+.|||
T Consensus       177 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G  206 (346)
T 4egb_A          177 SKASADMIALAYYKTYQLPVIVTRCSNNYG  206 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECEEES
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeecceeC
Confidence            5666665554    3699999999999997

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-26  Score=194.58  Aligned_cols=163  Identities=18%  Similarity=0.110  Sum_probs=122.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++ ..++.++++|++|++++++++      ++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999998877665444 356888999999999887654      5689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   ..++.+..+++|+.|+.++.+++    + .+ ++||++||..++.    +.+....|+.+| 
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----~~~~~~~Y~~sK-  155 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL----PIEQYAGYSASK-  155 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS----CCTTBHHHHHHH-
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC----CCCCCccHHHHH-
Confidence            999999998642211   11122345588999888777654    3 45 8999999998874    333445666554 


Q ss_pred             HHHHH-------HHHHhc--CCCEEEEecceEEe
Q 025619          225 KKMGE-------DFVQKS--GLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e-------~~~~~~--gi~~~~vrPg~v~~  249 (250)
                       ..++       .++...  ||++++|+||++++
T Consensus       156 -~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t  188 (253)
T 1hxh_A          156 -AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT  188 (253)
T ss_dssp             -HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC
T ss_pred             -HHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccC
Confidence             3333       334445  99999999999864

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=2.3e-25  Score=179.97  Aligned_cols=152  Identities=21%  Similarity=0.234  Sum_probs=123.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+|+||||+|+||++++++|+++|++|++++|++++.+...    ..+++++.+|++|.+++.++ ++++|+|||+||.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~-~~~~d~vi~~a~~   77 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADVDKT-VAGQDAVIVLLGT   77 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS----CCCSEEEESCTTSHHHHHHH-HTTCSEEEECCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc----CCceEEEEecCCCHHHHHHH-HcCCCEEEECccC
Confidence            378999999999999999999999999999999987654321    35788999999999999875 7899999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEE
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~  240 (250)
                      ...        ....++|+.++.+++++++ .+.++||++||.++++.......+...  |..+|..+|+++++.|++++
T Consensus        78 ~~~--------~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~--y~~~K~~~e~~~~~~~i~~~  147 (206)
T 1hdo_A           78 RND--------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQA--VTDDHIRMHKVLRESGLKYV  147 (206)
T ss_dssp             TTC--------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHH--HHHHHHHHHHHHHHTCSEEE
T ss_pred             CCC--------CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchh--HHHHHHHHHHHHHhCCCCEE
Confidence            542        1123689999999999885 578899999999888643221113344  44778889999999999999


Q ss_pred             EEecceEE
Q 025619          241 IISLCIYC  248 (250)
Q Consensus       241 ~vrPg~v~  248 (250)
                      ++|||+++
T Consensus       148 ~lrp~~~~  155 (206)
T 1hdo_A          148 AVMPPHIG  155 (206)
T ss_dssp             EECCSEEE
T ss_pred             EEeCCccc
Confidence            99999973

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=1.4e-26  Score=197.02  Aligned_cols=167  Identities=15%  Similarity=0.080  Sum_probs=125.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-------------ChhhHhhhhCcCC--CCCeeEEEeeCCCccC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-------------DPEKATTLFGKQD--EETLQVCKGDTRNPKD  143 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-------------~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~  143 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|             +.++++++.+.+.  ..++.++++|++|+++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            578999999999999999999999999999999998             5666555443221  4578889999999999


Q ss_pred             cchhh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCccccc
Q 025619          144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKF  208 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~  208 (250)
                      +++++      ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.+ .++||++||..++. 
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-  170 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK-  170 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc-
Confidence            88654      568999999999875322   111122345679999999999876     223 67999999998874 


Q ss_pred             CCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         +.+....|+.+|.     .+.+..++...||++++|+||++.+
T Consensus       171 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t  213 (280)
T 3pgx_A          171 ---ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVET  213 (280)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccC
Confidence               3344566765553     2223345566899999999999854

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=1.8e-26  Score=196.24  Aligned_cols=167  Identities=14%  Similarity=0.128  Sum_probs=123.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|++++++++      ++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999887765543321  346888999999999887654      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-C------CCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S------SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~------~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++|+||||||......   ...+..+..+++|+.|+.++++++. .      +.++||++||..++.    +......|+
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~  174 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----GVVHAAPYS  174 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc----CCCCCccHH
Confidence            8999999999764211   1111123456889999999998762 2      458999999998763    233445666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|.     .+.+..++...||++++|+||++.+
T Consensus       175 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  208 (277)
T 2rhc_B          175 ASKHGVVGFTKALGLELARTGITVNAVCPGFVET  208 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcC
Confidence            5543     1122234455799999999999853

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.93  E-value=1.2e-26  Score=195.28  Aligned_cols=167  Identities=14%  Similarity=0.148  Sum_probs=124.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++..+.+|++|.+++++++      ++
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999887665443321  346788999999998887643      46


Q ss_pred             CCcEEEEcCcCCCc--CC--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||....  +.  ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  166 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH----PFPNLGPYNV  166 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTBHHHHH
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC----CCCCchhHHH
Confidence            89999999997531  11  111112345688999999988875     34678999999998884    3344556665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||++.+
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  199 (260)
T 2zat_A          167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKT  199 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcccC
Confidence            543     1222344456799999999998853

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.93  E-value=1.2e-26  Score=197.04  Aligned_cols=165  Identities=16%  Similarity=0.118  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++++|++|++++++++      ++++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-GDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999998887766554 357889999999999988654      5689


Q ss_pred             cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      |+||||||......    .+.+..+..+++|+.|+.++++++    + .+  .++||++||..++.    +......|+.
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~Y~a  179 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS----PRPYSAPYTA  179 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS----CCTTCHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC----CCCCchHHHH
Confidence            99999999864211    111222446689999998888866    2 22  57999999998884    3344566765


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||+|.
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  211 (272)
T 4dyv_A          180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNAD  211 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhCccCEEEEEEEECccc
Confidence            554     222334456679999999999875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.93  E-value=1.8e-26  Score=200.24  Aligned_cols=167  Identities=16%  Similarity=0.159  Sum_probs=125.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--C--CCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--E--ETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~--~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|+.++++++.+.+.  .  .++.++.+|++|.+++++++      
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            5788999999999999999999999999999999999988776544322  2  26889999999999888754      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cC------CCCeEEEEccCcccccCCCCcc
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS------SLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~------~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                      ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.      +.++||++||.+++.+    .+
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~----~~  160 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA----AG  160 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC----CS
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC----CC
Confidence            468999999999864321   111223346689999999998876     11      3678999999998842    33


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ....|+.+|.     ...+..++...||++++|+||+|.+
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T  200 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKS  200 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEcc
Confidence            3456665554     1122344566799999999999853

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.93  E-value=1.7e-26  Score=194.79  Aligned_cols=166  Identities=14%  Similarity=0.128  Sum_probs=125.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|.+++++++      ++
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999988776654332  456889999999999988654      46


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......    ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  181 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN----PVADGAAYTA  181 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC----CCTTCHHHHH
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC----CCCCCchHHH
Confidence            8999999999843211    111122345688999999999876     24678999999998873    3444566765


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       182 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~  213 (262)
T 3rkr_A          182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVR  213 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCc
Confidence            553     122234455689999999999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.93  E-value=1.3e-26  Score=194.55  Aligned_cols=166  Identities=11%  Similarity=0.005  Sum_probs=122.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhh-----CC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-----EG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~-----~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++-     ++
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            4678999999999999999999999999999999999988777654432  4578899999999999887541     58


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  159 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR----GGSGFAAFASAK  159 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----CCTTCHHHHHHH
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----CCCCCccHHHHH
Confidence            999999999865321   111122345688999999988876     24568999999998873    334456676555


Q ss_pred             H-----HHHHHHHHHhcCCCE-EEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPF-TIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~-~~vrPg~v~  248 (250)
                      .     .+.+..++...||++ ++|+||++.
T Consensus       160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~  190 (252)
T 3h7a_A          160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVD  190 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEC----
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCCccC
Confidence            3     223334556689999 899999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.93  E-value=2e-26  Score=198.24  Aligned_cols=166  Identities=17%  Similarity=0.170  Sum_probs=127.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|.+++++++      ++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            4688999999999999999999999999999999999988777654432  457889999999999988654      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   ...++....+++|+.|+.++++++     +.+ .++||++||..++.    +.+....|+.
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  183 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV----PNAGLGTYGV  183 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----CCTTBHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----CCCCchHHHH
Confidence            8999999999864321   111222446689999999999876     233 57999999999883    3444566775


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||+|.
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  215 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVE  215 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCC
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccc
Confidence            554     222334556679999999999875

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=1.9e-25  Score=183.24  Aligned_cols=149  Identities=20%  Similarity=0.301  Sum_probs=120.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHH-HCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      |+|+|+||||+|+||++++++|+ ++|++|++++|+++ +++++..  ...+++++.+|++|.++++++ +.++|+||||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~-~~~~d~vv~~   80 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQA-VTNAEVVFVG   80 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHH-HTTCSEEEES
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHH-HcCCCEEEEc
Confidence            46789999999999999999999 89999999999998 7665531  146789999999999999975 7899999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhh---HH-HHHHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMN---LF-GVLKYKKMGEDFVQ  233 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~---~y-~~~k~k~~~e~~~~  233 (250)
                      ||..                |+. +++++++++ .+.++||++||..++.....+.....   .. .|..+|..+|.+++
T Consensus        81 ag~~----------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~  143 (221)
T 3r6d_A           81 AMES----------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLR  143 (221)
T ss_dssp             CCCC----------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCCC----------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence            9842                555 889999884 67889999999998853221110000   00 46678999999999


Q ss_pred             hcCCCEEEEecceEEe
Q 025619          234 KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~~gi~~~~vrPg~v~~  249 (250)
                      +.|+++++||||++++
T Consensus       144 ~~~i~~~~vrpg~v~~  159 (221)
T 3r6d_A          144 ESNLNYTILRLTWLYN  159 (221)
T ss_dssp             HSCSEEEEEEECEEEC
T ss_pred             hCCCCEEEEechhhcC
Confidence            9999999999999975

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.93  E-value=8.2e-27  Score=196.39  Aligned_cols=166  Identities=11%  Similarity=0.026  Sum_probs=123.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++|++|||||+||||++++++|+++|++|++++|++++ ++++.+++.   ..++.++.+|++|++++++++      +
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999876 665543321   246788999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  157 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV----ASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc----CCCCCchHHH
Confidence            68999999999764211   111122345688999999998876     24668999999998874    2334456665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|..     +.+..++...||++++|+||++.+
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  190 (260)
T 1x1t_A          158 AKHGVVGFTKVTALETAGQGITANAICPGWVRT  190 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC
T ss_pred             HHHHHHHHHHHHHHHhccCCEEEEEEeecCccC
Confidence            5431     122234455799999999999853

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=6.3e-27  Score=195.61  Aligned_cols=165  Identities=15%  Similarity=0.123  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++|++|||||+||||++++++|+++|++|++++| +.++.+++.+++.  ..++.++++|++|.+++++++      ++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999999887 4455555443321  456888999999999988654      46


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~s  157 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG----NPGQANYVAT  157 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----CTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC----CCCChHHHHH
Confidence            89999999998653211   11122345688999999999876     246789999999888742    3344566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  188 (246)
T 3osu_A          158 KAGVIGLTKSAARELASRGITVNAVAPGFIV  188 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECCCc
Confidence            54     222334455789999999999885

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=9.4e-27  Score=197.98  Aligned_cols=166  Identities=14%  Similarity=0.127  Sum_probs=125.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++.++..+++.   ..++.++++|++|++++++++      +
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999887666543321   457889999999999888654      5


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.+    ......|+.
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~a  179 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG----QALQVHAGS  179 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT----CTTCHHHHH
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC----CCCcHHHHH
Confidence            68999999999754211   111222445689999999999876     235679999999988742    333456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||+|.
T Consensus       180 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  211 (277)
T 4fc7_A          180 AKAAVDAMTRHLAVEWGPQNIRVNSLAPGPIS  211 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCEe
Confidence            543     222334556679999999999985

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.93  E-value=1.3e-26  Score=195.22  Aligned_cols=165  Identities=17%  Similarity=0.225  Sum_probs=123.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.    ..++.++.+|++|++++++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999887766544332    226888999999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++ +|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+
T Consensus        84 ~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  158 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR----PWQDLALSN  158 (260)
T ss_dssp             TC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHH
T ss_pred             cC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC----CCCCCchhH
Confidence            24 999999999754211   111122345688999998887765     34678999999998874    333445666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||++.
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  191 (260)
T 2z1n_A          159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLIL  191 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcc
Confidence            5543     222334456679999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=2.9e-26  Score=192.70  Aligned_cols=162  Identities=14%  Similarity=0.032  Sum_probs=120.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++ +++.+++.  . .++++|++|++++++++      ++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999877 55444332  3 78899999998887654      4689


Q ss_pred             cEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||........   .++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----AEQENAAYNASKG  154 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----BCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC----CCCCChhHHHHHH
Confidence            9999999986432111   1112345688999999998866     24678999999998873    2334456665543


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     +.+..++...||++++|+||++.
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  183 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIA  183 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCcc
Confidence            1     12223445679999999999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-26  Score=197.19  Aligned_cols=167  Identities=16%  Similarity=0.139  Sum_probs=123.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CC---CeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~---~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..   ++.++.+|++|++++++++     
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999987766543321  22   6888999999999887654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC-------CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcch
Q 025619          149 -FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~-------~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                       ++++|+||||||......       ...+..+..+++|+.|+.++++++.     .+ ++||++||..++...   .+.
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---~~~  158 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA---QPD  158 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC---CCS
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC---CCc
Confidence             468999999999764211       1111123455889999999998762     34 899999999887432   133


Q ss_pred             hhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          216 MNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       216 ~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ...|+.+|..     +.+..++...||++++|+||++.+
T Consensus       159 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  197 (280)
T 1xkq_A          159 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVET  197 (280)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcC
Confidence            4566655431     222344456799999999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=1.2e-26  Score=193.95  Aligned_cols=165  Identities=18%  Similarity=0.163  Sum_probs=122.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++|+++||||+||||++++++|+++|++|++++| ++++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56899999999999999999999999999999999 7777665443321  346888999999999888654      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~as  157 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG----NPGQANYVAA  157 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----CTTBHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC----CCCCchHHHH
Confidence            8999999999864221   111122345688999988887765     246789999999887632    2334566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  188 (246)
T 2uvd_A          158 KAGVIGLTKTSAKELASRNITVNAIAPGFIA  188 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEecccc
Confidence            43     222334556689999999999874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-26  Score=195.26  Aligned_cols=166  Identities=17%  Similarity=0.128  Sum_probs=124.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999887766543322  346888999999999887643      56


Q ss_pred             CCcEEEEcCcCC-CcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~-~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||.. ....   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~a  159 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG----PPNMAAYGT  159 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC----CTTBHHHHH
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC----CCCCchHHH
Confidence            899999999976 2111   111122345688999999998876     235689999999887742    233456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  191 (262)
T 1zem_A          160 SKGAIIALTETAALDLAPYNIRVNAISPGYMG  191 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcC
Confidence            553     223334556789999999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=1.8e-26  Score=197.44  Aligned_cols=167  Identities=16%  Similarity=0.194  Sum_probs=126.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      ++++|++|||||+||||++++++|+++|+   +|++++|+.++++++.+++    ...++.++.+|++|++++++++   
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            35789999999999999999999999998   9999999998877765433    2456888999999999988654   


Q ss_pred             ---hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 ---FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                         ++++|+||||||......    ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+..
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~~  185 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD----AYPTG  185 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTC
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC----CCCCC
Confidence               468999999999764211    111122445689999999999876     24678999999998873    33445


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T  223 (287)
T 3rku_A          186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVET  223 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEES
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcC
Confidence            66665553     1223344456799999999999853

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.3e-26  Score=196.08  Aligned_cols=163  Identities=15%  Similarity=0.166  Sum_probs=122.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|++++++++      +++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999999999988777654432  356788999999999888654      568


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .+.+.....+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~~~~Y~asK  157 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS----VVPTAAVYCATK  157 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc----cCCCChhHHHHH
Confidence            999999999864321   111222345688999999888876     24668999999998874    334445666554


Q ss_pred             HHHHHHHHH----Hh-cCCCEEEEecceEE
Q 025619          224 YKKMGEDFV----QK-SGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~k~~~e~~~----~~-~gi~~~~vrPg~v~  248 (250)
                        .+++.+.    .+ .||++++|+||+|.
T Consensus       158 --aal~~l~~~la~e~~gIrvn~v~PG~v~  185 (264)
T 3tfo_A          158 --FAVRAISDGLRQESTNIRVTCVNPGVVE  185 (264)
T ss_dssp             --HHHHHHHHHHHHHCSSEEEEEEEECCC-
T ss_pred             --HHHHHHHHHHHHhCCCCEEEEEecCCCc
Confidence              3333221    11 39999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=1.4e-26  Score=194.15  Aligned_cols=166  Identities=14%  Similarity=0.131  Sum_probs=120.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-----CCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++     ...++.++++|++|.+++++++     
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877655432     1257889999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCcCCCC--CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 -FEGVTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~~~--~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                       ++++|+||||||.......+  .+..+..+++|+.|+.++++++     +.+.++||++||..+..+    ..+...|+
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~  159 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG----FADGGIYG  159 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCTTHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC----CCCCcchH
Confidence             46899999999986432111  1112345688999999999876     246689999999988742    22345666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||++.
T Consensus       160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  192 (250)
T 3nyw_A          160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVN  192 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence            5554     223334556679999999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.9e-26  Score=195.86  Aligned_cols=166  Identities=14%  Similarity=0.180  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---C--CCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D--EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~--~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++   .  ..++.++++|++|++++++++     
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999988776654332   1  346788999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---C----CCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcc-cccCCCCcc
Q 025619          149 -FEGVTHVICCTGTTAFPS---R----RWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV-TKFNELPWS  214 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~----~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~-~~~~~~~~~  214 (250)
                       ++++|+||||||......   .    ..+..+..+++|+.|+.++++++.     .+ ++||++||..+ +.    +.+
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~----~~~  157 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH----ATP  157 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS----CCT
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc----CCC
Confidence             458999999999764211   1    111223456889999999998762     24 89999999987 53    233


Q ss_pred             hhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          215 IMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       215 ~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ....|+.+|..     +.+..++...||++++|+||++.+
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  197 (278)
T 1spx_A          158 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVAT  197 (278)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccC
Confidence            34566655431     122234456799999999999853

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.93  E-value=2.8e-26  Score=195.75  Aligned_cols=166  Identities=15%  Similarity=0.103  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC----------------hhhHhhhhCcCC--CCCeeEEEeeCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------------PEKATTLFGKQD--EETLQVCKGDTRN  140 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~----------------~~~~~~~~~~~~--~~~~~~v~~Dl~d  140 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+                .++++++.+++.  ..++.++++|++|
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            5789999999999999999999999999999999987                555554433221  4578899999999


Q ss_pred             ccCcchhh------hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCc
Q 025619          141 PKDLDPAI------FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVG  204 (250)
Q Consensus       141 ~~~~~~~~------~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~  204 (250)
                      ++++++++      ++++|+||||||......    ...+..+..+++|+.|+.++++++     +.+ .++||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            99988654      568999999999865321    111222346689999999999876     223 57999999998


Q ss_pred             ccccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          205 VTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       205 ~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ++.    +.+....|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       168 ~~~----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~  212 (286)
T 3uve_A          168 GLK----AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVK  212 (286)
T ss_dssp             GTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             hcc----CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence            873    3344556765553     223335556689999999999985

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.93  E-value=5e-26  Score=188.32  Aligned_cols=162  Identities=15%  Similarity=0.162  Sum_probs=119.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      ++|+|+||||+||||++++++|+++|++|++++|++++++++.+++.  ++.++.+|++|.+++++++      ++++|+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56899999999999999999999999999999999888776654432  6788999999999887643      468999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      ||||||......   ...++....+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|.. 
T Consensus        82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----PFKGGAAYNASKFGL  157 (234)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----CCTTCHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC----CCCCCchhhHHHHHH
Confidence            999999764211   111122345688999998766654     34678999999998874    33344566655531 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          +.+..++...||++++|+||++.
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~  184 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVD  184 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC---
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence                12234455679999999999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.93  E-value=4e-26  Score=190.72  Aligned_cols=167  Identities=15%  Similarity=0.088  Sum_probs=122.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV  155 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~v  155 (250)
                      ....+|+||||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++.+|++|.+++++++  .+++|+|
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNLANKEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            3678999999999999999999999999999999999998887765544 347888999999999888654  3589999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      |||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|..  
T Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~a~~  164 (249)
T 3f9i_A           89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA----GNPGQANYCASKAGLI  164 (249)
T ss_dssp             EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------CCSCSHHHHHHHHHHH
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc----CCCCCchhHHHHHHHH
Confidence            99999865321   122233456689999999998876     24668999999998874    33445667655541  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         +.+..++...||++++++||++.+
T Consensus       165 ~~~~~la~e~~~~gi~v~~v~PG~v~t  191 (249)
T 3f9i_A          165 GMTKSLSYEVATRGITVNAVAPGFIKS  191 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBC-
T ss_pred             HHHHHHHHHHHHcCcEEEEEecCcccc
Confidence               222344456799999999999853

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=7.7e-27  Score=203.96  Aligned_cols=166  Identities=17%  Similarity=0.127  Sum_probs=126.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh----HhhhhCcCC---CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~----~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|+...    .+.+.....   ..+++++.+|++|.+++.++ +.++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~  101 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV-MKGV  101 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH-TTTC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-hcCC
Confidence            467899999999999999999999999999999996542    222221110   05789999999999999875 7899


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~  224 (250)
                      |+|||+||....+ ..+.+....+++|+.|+.+++++++ .++++||++||.++|+..       +.+..+.+.|+  .+
T Consensus       102 d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~s  178 (351)
T 3ruf_A          102 DHVLHQAALGSVP-RSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYA--VT  178 (351)
T ss_dssp             SEEEECCCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH--HH
T ss_pred             CEEEECCccCCcc-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhH--HH
Confidence            9999999975421 1112333456899999999999984 678999999999998632       22334456666  55


Q ss_pred             HHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          225 KKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      |..+|+.+    ++.|++++++||+.|||
T Consensus       179 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G  207 (351)
T 3ruf_A          179 KYVNEIYAQVYARTYGFKTIGLRYFNVFG  207 (351)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEEECSEES
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeeCceeC
Confidence            66666554    35699999999999997

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.8e-26  Score=198.29  Aligned_cols=167  Identities=14%  Similarity=0.142  Sum_probs=123.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CC---CeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~---~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..   ++.++.+|++|++++++++     
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999887766543321  22   6888999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||......     ...+..+..+++|+.|+.++++++     +.+ ++||++||..++.+.   .+...
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~---~~~~~  178 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA---HSGYP  178 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC---CTTSH
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC---CCCcc
Confidence             468999999999764211     111122345688999999998876     234 899999999887422   03345


Q ss_pred             HHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|..     +.+..++...||++++|+||++.+
T Consensus       179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T  215 (297)
T 1xhl_A          179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVAT  215 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcC
Confidence            66655431     222344556899999999999853

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=2e-26  Score=191.26  Aligned_cols=153  Identities=23%  Similarity=0.255  Sum_probs=125.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +++|+||||||+||||++++++|+++|+  +|++++|++++.+...    ..+++++.+|++|+++++++ ++++|+|||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~   90 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASA-FQGHDVGFC   90 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGG-GSSCSEEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----cCCceEEecCcCCHHHHHHH-hcCCCEEEE
Confidence            4578999999999999999999999999  9999999987654322    23678899999999999975 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      |||..... .   ..+..+++|+.++.+++++++ .+.++||++||.+++...      ...  |..+|..+|.+++..+
T Consensus        91 ~ag~~~~~-~---~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------~~~--Y~~sK~~~e~~~~~~~  158 (242)
T 2bka_A           91 CLGTTRGK-A---GAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------NFL--YLQVKGEVEAKVEELK  158 (242)
T ss_dssp             CCCCCHHH-H---HHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------SSH--HHHHHHHHHHHHHTTC
T ss_pred             CCCccccc-C---CcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC------cch--HHHHHHHHHHHHHhcC
Confidence            99975321 0   123456889999999999884 577899999999888521      234  4477889999999999


Q ss_pred             C-CEEEEecceEEe
Q 025619          237 L-PFTIISLCIYCI  249 (250)
Q Consensus       237 i-~~~~vrPg~v~~  249 (250)
                      + ++++||||++++
T Consensus       159 ~~~~~~vrpg~v~~  172 (242)
T 2bka_A          159 FDRYSVFRPGVLLC  172 (242)
T ss_dssp             CSEEEEEECCEEEC
T ss_pred             CCCeEEEcCceecC
Confidence            9 599999999986

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.93  E-value=2.5e-26  Score=192.98  Aligned_cols=165  Identities=13%  Similarity=0.121  Sum_probs=121.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|.+++++++      ++++
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999999887766543321  346888999999999888654      4589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |+||||||......   .+.+..+..+++|+.|+.++++++     +.+ .++||++||..++.    +.+....|+.+|
T Consensus        81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  156 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----GNPELAVYSSSK  156 (256)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC----CCCCchhHHHHH
Confidence            99999999764211   111122345688999999888866     234 68999999988763    223345666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...||++++|+||++.+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  187 (256)
T 1geg_A          157 FAVRGLTQTAARDLAPLGITVNGYCPGIVKT  187 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCCcc
Confidence            3     1222344556799999999999853

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.93  E-value=1.5e-26  Score=195.07  Aligned_cols=163  Identities=16%  Similarity=0.011  Sum_probs=118.2

Q ss_pred             CCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------h
Q 025619           76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        76 ~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ..+++++|++|||||+||||++++++|+++|++|++++|+.++..+....   .++.++.+|++|++++++++      +
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---AGAVALYGDFSCETGIMAFIDLLKTQT   97 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---HTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---cCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence            33467899999999999999999999999999999999998765433222   24788999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCCCC--CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~--~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +++|+||||||.......+  ++..+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  173 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK----GSSKHIAYCAT  173 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT----CCSSCHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC----CCCCcHhHHHH
Confidence            6899999999986532211  1112345688999999998876     34568999999998874    33445566655


Q ss_pred             HHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          223 KYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.  +++       .++.. +|++++|+||++.
T Consensus       174 Ka--a~~~l~~~la~e~~~-~Irvn~v~PG~v~  203 (260)
T 3gem_A          174 KA--GLESLTLSFAARFAP-LVKVNGIAPALLM  203 (260)
T ss_dssp             HH--HHHHHHHHHHHHHTT-TCEEEEEEECTTC
T ss_pred             HH--HHHHHHHHHHHHHCC-CCEEEEEeecccc
Confidence            43  333       33334 6999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=1.7e-26  Score=192.81  Aligned_cols=167  Identities=13%  Similarity=0.036  Sum_probs=126.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999987776544332  457889999999999888654      45


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~s  157 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA----GNPGQTNYCAA  157 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----CCCCcHHHHHH
Confidence            8999999999875321   111222345688999999998876     24567999999998874    23344566655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.     .+.+..++...||++++|+||++.+
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  189 (247)
T 3lyl_A          158 KAGVIGFSKSLAYEVASRNITVNVVAPGFIAT  189 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEeeCcEec
Confidence            53     2222344556799999999999853

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.93  E-value=4.8e-26  Score=195.67  Aligned_cols=166  Identities=11%  Similarity=0.080  Sum_probs=124.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------hhhHhhhhCcCC--CCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~------------~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~  144 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+            .+++++..+++.  ..++.++++|++|.+++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            5789999999999999999999999999999999987            555544433221  45788999999999998


Q ss_pred             chhh------hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCccccc
Q 025619          145 DPAI------FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKF  208 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~  208 (250)
                      ++++      ++++|+||||||......    .+.+..+..+++|+.|+.++++++     + .+.++||++||..++. 
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~-  183 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR-  183 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-
Confidence            8654      568999999999865321    111122446689999999999875     2 2367999999998873 


Q ss_pred             CCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         +......|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       184 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  225 (299)
T 3t7c_A          184 ---GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVA  225 (299)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcc
Confidence               3344556765554     223334556679999999999985

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.93  E-value=2.3e-26  Score=192.63  Aligned_cols=161  Identities=17%  Similarity=0.218  Sum_probs=121.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI  156 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~vi  156 (250)
                      |+++||||+||||++++++|+++|++|++++|++++++++.+++ ..++.++.+|++|++++++++      ++++|+||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            58999999999999999999999999999999998877765544 246889999999999887654      45899999


Q ss_pred             EcCcCCC-c-CC--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          157 CCTGTTA-F-PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       157 ~~Ag~~~-~-~~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      ||||... . +.  .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|..  
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKaa~~  155 (248)
T 3asu_A           80 NNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----PYAGGNVYGATKAFVR  155 (248)
T ss_dssp             ECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHHHHHH
T ss_pred             ECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc----CCCCCchHHHHHHHHH
Confidence            9999753 1 11  111223445689999999988876     24678999999998873    33344566655431  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         +.+..++...||++++|+||+|.
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~PG~v~  181 (248)
T 3asu_A          156 QFSLNLRTDLHGTAVRVTDIEPGLVG  181 (248)
T ss_dssp             HHHHHHHHHTTTSCCEEEEEEECSBC
T ss_pred             HHHHHHHHHhhhcCcEEEEEeccccc
Confidence               12223445579999999999986

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.93  E-value=6.3e-26  Score=192.39  Aligned_cols=167  Identities=12%  Similarity=0.111  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC---CCCeeEEEeeCCCc----cCcchhh--
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNP----KDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~---~~~~~~v~~Dl~d~----~~~~~~~--  148 (250)
                      .+++|++|||||+||||++++++|+++|++|++++| ++++++++.+++.   ..++.++.+|++|.    +++++++  
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            357899999999999999999999999999999999 8877766544331   34688899999999    7776543  


Q ss_pred             ----hCCCcEEEEcCcCCCcCCC-CC-------------CCCCCcceehHHHHHHHHHHcc----CCC------CeEEEE
Q 025619          149 ----FEGVTHVICCTGTTAFPSR-RW-------------DGDNTPEKVDWEGVRNLVSALP----SSL------KRIVLV  200 (250)
Q Consensus       149 ----~~~~D~vi~~Ag~~~~~~~-~~-------------~~~~~~~~~N~~g~~~l~~a~~----~~~------~~iV~i  200 (250)
                          ++++|+||||||....... +.             +..+..+++|+.|+.++++++.    .+.      ++||++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                4689999999998642211 11             1112356889999999998762    334      799999


Q ss_pred             ccCcccccCCCCcchhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          201 SSVGVTKFNELPWSIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       201 SS~~~~~~~~~~~~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ||..++.    +.+....|+.+|..     +.+..++...||++++|+||++.+
T Consensus       168 sS~~~~~----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t  217 (276)
T 1mxh_A          168 CDAMTDL----PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL  217 (276)
T ss_dssp             CCGGGGS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             CchhhcC----CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence            9998874    33444566655431     222344556799999999999854

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=2.3e-26  Score=201.39  Aligned_cols=160  Identities=21%  Similarity=0.311  Sum_probs=128.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|++++.+.+.+.+...+++++.+|++|.++++++ +.++|+||
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~D~Vi   96 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA-LEGVDICI   96 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH-TTTCSEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH-HhcCCEEE
Confidence            467899999999999999999999999 98 9999999988776655444446789999999999999875 78999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHh-
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK-  234 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~-  234 (250)
                      |+||....+... ..+...+++|+.|+.++++++. .++++||++||..++.       +.+.|+  .+|..+|.+++. 
T Consensus        97 h~Aa~~~~~~~~-~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~-------p~~~Y~--~sK~~~E~~~~~~  166 (344)
T 2gn4_A           97 HAAALKHVPIAE-YNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN-------PINLYG--ATKLCSDKLFVSA  166 (344)
T ss_dssp             ECCCCCCHHHHH-HSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS-------CCSHHH--HHHHHHHHHHHHG
T ss_pred             ECCCCCCCCchh-cCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC-------CccHHH--HHHHHHHHHHHHH
Confidence            999976532111 1233566899999999999884 6889999999987763       234555  667777776643 


Q ss_pred             ------cCCCEEEEecceEEe
Q 025619          235 ------SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ------~gi~~~~vrPg~v~~  249 (250)
                            .|++++++|||.|+|
T Consensus       167 ~~~~~~~g~~~~~vRpg~v~g  187 (344)
T 2gn4_A          167 NNFKGSSQTQFSVVRYGNVVG  187 (344)
T ss_dssp             GGCCCSSCCEEEEECCCEETT
T ss_pred             HHHhCCCCcEEEEEEeccEEC
Confidence                  579999999999986

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.93  E-value=3.4e-26  Score=194.40  Aligned_cols=166  Identities=13%  Similarity=0.105  Sum_probs=124.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-------------ChhhHhhhhCcC--CCCCeeEEEeeCCCccC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-------------DPEKATTLFGKQ--DEETLQVCKGDTRNPKD  143 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-------------~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~  143 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|             +.+++++..+.+  ...++.++.+|++|.++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            578999999999999999999999999999999998             555555443322  14578899999999999


Q ss_pred             cchhh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCccccc
Q 025619          144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKF  208 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~  208 (250)
                      +++++      ++++|+||||||......   .+.+..+..+++|+.|+.++++++     +.+ .++||++||..++. 
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-  166 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK-  166 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC-
Confidence            88654      478999999999875321   111222445689999999999875     223 57999999998874 


Q ss_pred             CCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          209 NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         +.+....|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       167 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  208 (277)
T 3tsc_A          167 ---MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVN  208 (277)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCc
Confidence               3334456665554     223334556679999999999985

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.93  E-value=3.2e-26  Score=194.70  Aligned_cols=169  Identities=14%  Similarity=0.121  Sum_probs=125.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++++|++|++++++++      +
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999999999888776654432  457889999999999988754      4


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||.......   +.+..+..+++|+.|+.++++++     +.+ .++||++||..++....  ......|+
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~--~~~~~~Y~  185 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI--PQQVSHYC  185 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC--SSCCHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC--CCCcchHH
Confidence            689999999998753211   11122334578999999999876     223 37999999988764221  12335566


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||+|.
T Consensus       186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  218 (276)
T 3r1i_A          186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR  218 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            5543     222334455689999999999985

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=1.9e-25  Score=193.84  Aligned_cols=164  Identities=21%  Similarity=0.198  Sum_probs=125.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEE-EeeCCCccCcchhhhCCCcE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVC-KGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v-~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+   ...+++++ .+|++|.++++++ +.++|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV-IKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT-TTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH-HcCCCE
Confidence            457889999999999999999999999999999999987665443221   12468888 7999999999875 689999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCcccccCC-----C----------------
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKFNE-----L----------------  211 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~~~~-----~----------------  211 (250)
                      ||||||.....    .+....+++|+.|+.++++++.  .+.++||++||.++++...     .                
T Consensus        87 vih~A~~~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  162 (342)
T 1y1p_A           87 VAHIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAK  162 (342)
T ss_dssp             EEECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHH
T ss_pred             EEEeCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhc
Confidence            99999976432    1334466899999999999884  4679999999998874211     1                


Q ss_pred             ------CcchhhHHHHHHHHHHHHHHHHh------cCCCEEEEecceEEe
Q 025619          212 ------PWSIMNLFGVLKYKKMGEDFVQK------SGLPFTIISLCIYCI  249 (250)
Q Consensus       212 ------~~~~~~~y~~~k~k~~~e~~~~~------~gi~~~~vrPg~v~~  249 (250)
                            +..+.+.|+  .+|.++|.+++.      .+++++++|||.+||
T Consensus       163 ~~~~~~~~~~~~~Y~--~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g  210 (342)
T 1y1p_A          163 TLPESDPQKSLWVYA--ASKTEAELAAWKFMDENKPHFTLNAVLPNYTIG  210 (342)
T ss_dssp             HSCTTSTTHHHHHHH--HHHHHHHHHHHHHHHHHCCSSEEEEEEESEEEC
T ss_pred             cccccccccchHHHH--HHHHHHHHHHHHHHHhcCCCceEEEEcCCceEC
Confidence                  112334555  566666665532      279999999999987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=4.7e-26  Score=194.03  Aligned_cols=166  Identities=13%  Similarity=0.153  Sum_probs=116.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++| +.++++++.+++.  ..++.++++|++|++++++++      +
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999985 6666655443322  457889999999999988754      4


Q ss_pred             CCCcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHc-----cCC---CCeEEEEccCcccccCCCCcchh
Q 025619          150 EGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSS---LKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~---~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                      +++|+||||||......     ...++.+..+++|+.|+.++++++     +.+   .++||++||..++.    +.+..
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~  181 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----TSPER  181 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------CC
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----CCCCc
Confidence            68999999999842111     112223445689999999988876     122   57999999998873    33344


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  218 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR  218 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCc
Confidence            56665543     122234455679999999999985

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.93  E-value=1.9e-26  Score=195.01  Aligned_cols=166  Identities=15%  Similarity=0.130  Sum_probs=123.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh--hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI--FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~--~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++.    ...+..+.+|++|++++++++  ++++
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999999887766543321    345778999999999887654  5689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.++.++.+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|.
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  162 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM----PSQEMAHYSATKT  162 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc----CCCcchHHHHHHH
Confidence            999999998653211   11112334689999988887765     24568999999998883    3444566665553


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     +.+..++...||++++|+||++.
T Consensus       163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~  191 (267)
T 3t4x_A          163 MQLSLSRSLAELTTGTNVTVNTIMPGSTL  191 (267)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCeec
Confidence            1     22223445578999999999875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.93  E-value=2.5e-25  Score=191.52  Aligned_cols=152  Identities=20%  Similarity=0.147  Sum_probs=121.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+||||||+|+||++++++|+++|++|++++|+++..+ +      .+++++.+|++ .+++.++ +.++|+|||+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~Dl~-~~~~~~~-~~~~d~Vih~a~~   72 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I------NDYEYRVSDYT-LEDLINQ-LNDVDAVVHLAAT   72 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHHH-TTTCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C------CceEEEEcccc-HHHHHHh-hcCCCEEEEcccc
Confidence            579999999999999999999999999999999844332 2      16889999999 8888875 7899999999998


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      ....     +....+++|+.++.+++++++ .++++||++||..+|+..       +.+..+.+.|+  .+|..+|+.++
T Consensus        73 ~~~~-----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~~  145 (311)
T 3m2p_A           73 RGSQ-----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYG--VSKLACEHIGN  145 (311)
T ss_dssp             CCSS-----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHH--HHHHHHHHHHH
T ss_pred             CCCC-----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhH--HHHHHHHHHHH
Confidence            6532     445567899999999999984 688999999999988632       23334456666  55666666554


Q ss_pred             h----cCCCEEEEecceEEe
Q 025619          234 K----SGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~----~gi~~~~vrPg~v~~  249 (250)
                      .    .|++++++||+.+||
T Consensus       146 ~~~~~~g~~~~ilRp~~v~G  165 (311)
T 3m2p_A          146 IYSRKKGLCIKNLRFAHLYG  165 (311)
T ss_dssp             HHHHHSCCEEEEEEECEEEC
T ss_pred             HHHHHcCCCEEEEeeCceeC
Confidence            3    799999999999997

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=4.6e-26  Score=191.22  Aligned_cols=168  Identities=14%  Similarity=0.105  Sum_probs=123.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++++|+||||||+||||++++++|+++|++|++++|+.++.+++.+.+.  ..++.++.+|++|++++++++      +
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35788999999999999999999999999999999999877665433221  346889999999999888654      3


Q ss_pred             CCCcEEEEcCcCCC-cCC-CCC--CCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTA-FPS-RRW--DGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~-~~~-~~~--~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||... ... .+.  +.....+++|+.|+.++++++.     .+.++||++||..++...  +..+...|+
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--~~~~~~~Y~  166 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN--RPQQQAAYN  166 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCCHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC--CCCCccccH
Confidence            58999999999764 111 111  1113456889999999998762     367899999998876422  112225666


Q ss_pred             HHHHHHHHHH-------HHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+  |.+++.       ++...||++++|+||++++
T Consensus       167 ~s--K~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t  200 (260)
T 3awd_A          167 AS--KAGVHQYIRSLAAEWAPHGIRANAVAPTYIET  200 (260)
T ss_dssp             HH--HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HH--HHHHHHHHHHHHHHhhhcCeEEEEEEeeeecc
Confidence            44  444443       3344799999999999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.93  E-value=5.5e-26  Score=198.23  Aligned_cols=154  Identities=24%  Similarity=0.322  Sum_probs=121.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.++|+||||||+|+||++++++|+++|++|++++|+++.          .+++++.+|++|.+++.++ +.++|+|||+
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~   84 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSDA-IMGVSAVLHL   84 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHHH-HTTCSEEEEC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHHH-HhCCCEEEEC
Confidence            5678899999999999999999999999999999998754          3678899999999999875 7899999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc---------CCCCcchhhHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF---------NELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~---------~~~~~~~~~~y~~~k~k~~~  228 (250)
                      |+........+   ...+++|+.|+.+++++++ .++++||++||.++|+.         +..+..+.+.|+  .+|..+
T Consensus        85 A~~~~~~~~~~---~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~  159 (347)
T 4id9_A           85 GAFMSWAPADR---DRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYG--LTKLLG  159 (347)
T ss_dssp             CCCCCSSGGGH---HHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHH--HHHHHH
T ss_pred             CcccCcchhhH---HHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHH--HHHHHH
Confidence            99765332221   4566899999999999884 67899999999999864         122334556666  556666


Q ss_pred             HHHH----HhcCCCEEEEecceEE
Q 025619          229 EDFV----QKSGLPFTIISLCIYC  248 (250)
Q Consensus       229 e~~~----~~~gi~~~~vrPg~v~  248 (250)
                      |+++    ++.|++++++||+++|
T Consensus       160 E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          160 EELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHHHhcCCceEEEccceEe
Confidence            6555    4579999999999998

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.93  E-value=7.8e-26  Score=191.59  Aligned_cols=166  Identities=12%  Similarity=0.180  Sum_probs=123.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++.+++.+++. ..++.++.+|++|++++++++      +++
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999999999999999999999999999999999877665543332 237889999999999888654      358


Q ss_pred             CcEEEEcCcCCCcCCCCC-----CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          152 VTHVICCTGTTAFPSRRW-----DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~-----~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +|+||||||........+     +.....+++|+.|+.++++++     +.+.++||++||..++....   .+...|+.
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~Y~~  169 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---GVSHVYTA  169 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---TSCHHHHH
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC---CCCcchHH
Confidence            999999999764211111     112335688999999999876     23678999999998885321   13345664


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +  |.+++       .++...||++++|+||++++
T Consensus       170 s--K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  202 (278)
T 2bgk_A          170 T--KHAVLGLTTSLCTELGEYGIRVNCVSPYIVAS  202 (278)
T ss_dssp             H--HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSC
T ss_pred             H--HHHHHHHHHHHHHHHhhcCcEEEEEEeceecc
Confidence            4  44444       33345799999999999864

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.93  E-value=1.5e-25  Score=192.54  Aligned_cols=157  Identities=14%  Similarity=0.158  Sum_probs=122.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||+|+||++++++|+++|++|++++|+.+......    ..+++++.+|++|.+ +.++ +.+ |+|||+||..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~~~-~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WGAG-IKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TTTT-CCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HHhh-cCC-CEEEECCCCC
Confidence            47999999999999999999999999999999876544332    457889999999998 8765 566 9999999965


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHH--
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV--  232 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~--  232 (250)
                      .. .....+....+++|+.|+.+++++++ .+.++||++||.++|+..       +.+..+.+.|+  .+|..+|+++  
T Consensus        74 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~--~sK~~~e~~~~~  150 (312)
T 3ko8_A           74 EV-RLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG--AAKAAGEVMCAT  150 (312)
T ss_dssp             SS-SGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHHHHHH
T ss_pred             Cc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH--HHHHHHHHHHHH
Confidence            32 12222334456889999999999884 578899999999998642       23445556666  5566666554  


Q ss_pred             --HhcCCCEEEEecceEEe
Q 025619          233 --QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 --~~~gi~~~~vrPg~v~~  249 (250)
                        ++.|++++++|||.+||
T Consensus       151 ~~~~~g~~~~~lrp~~v~g  169 (312)
T 3ko8_A          151 YARLFGVRCLAVRYANVVG  169 (312)
T ss_dssp             HHHHHCCEEEEEEECEEEC
T ss_pred             HHHHhCCCEEEEeeccccC
Confidence              34699999999999997

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=4.6e-26  Score=193.69  Aligned_cols=166  Identities=17%  Similarity=0.176  Sum_probs=121.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++. ..++.++.+|++|++++++++      +++
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            5788999999999999999999999999999999999887766544332 126788899999999887654      468


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCC----CeEEEEccCcccccCCCCcchhh-H
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSL----KRIVLVSSVGVTKFNELPWSIMN-L  218 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~----~~iV~iSS~~~~~~~~~~~~~~~-~  218 (250)
                      +|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.    ++||++||..++.+.    +... .
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----~~~~~~  181 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----GEQAYA  181 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC----CCSCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC----CCCccc
Confidence            9999999997643211   11112345688999998888765     2233    899999999887432    2223 5


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++...||++++|+||++.
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~  216 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFP  216 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence            654443     122223445679999999999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.93  E-value=1e-25  Score=189.00  Aligned_cols=163  Identities=18%  Similarity=0.114  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeC--CCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDT--RNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl--~d~~~~~~~~-----  148 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++.+|+  +|.+++++++     
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988776554332   23678899999  8888877643     


Q ss_pred             -hCCCcEEEEcCcCCCc--CCCC--CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAF--PSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~--~~~~--~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||....  +..+  .+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~  164 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ----GRANWGA  164 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS----CCTTCHH
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc----CCCCCch
Confidence             4689999999998532  1111  1112345689999999999876     34678999999998873    3334456


Q ss_pred             HHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|  .+++       .++... |++++|+||++.
T Consensus       165 Y~asK--~a~~~l~~~la~e~~~~-irvn~v~PG~v~  198 (252)
T 3f1l_A          165 YAASK--FATEGMMQVLADEYQQR-LRVNCINPGGTR  198 (252)
T ss_dssp             HHHHH--HHHHHHHHHHHHHTTTT-CEEEEEECCSBS
T ss_pred             hHHHH--HHHHHHHHHHHHHhcCC-cEEEEEecCccc
Confidence            66554  3333       333334 999999999874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.93  E-value=9.9e-26  Score=189.37  Aligned_cols=157  Identities=18%  Similarity=0.174  Sum_probs=117.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++         .+.++++|++|++++++++      ++++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            578899999999999999999999999999999999875432         3678999999999887654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~  164 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL----GSAGQANYAASKA  164 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC----CHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----CCCCcHHHHHHHH
Confidence            99999999864321   122333456689999999998866     23678999999988773    3344456665443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||++++|+||++.
T Consensus       165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (253)
T 2nm0_A          165 GLVGFARSLARELGSRNITFNVVAPGFVD  193 (253)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence                 122223445579999999999874

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.93  E-value=2.2e-25  Score=193.78  Aligned_cols=157  Identities=16%  Similarity=0.098  Sum_probs=119.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||+|+||++++++|+++|++|++++|++++.+.+.    ..+++++.+|++|.+++.++ +.++|+|||+||..
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~   88 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLERA-LRGLDGVIFSAGYY   88 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHHHH-TTTCSEEEEC----
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHHHH-HcCCCEEEECCccC
Confidence            48999999999999999999999999999999887655432    23688999999999999875 68899999999975


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC--------CCcch----hhHHHHHHHHHHHH
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE--------LPWSI----MNLFGVLKYKKMGE  229 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~--------~~~~~----~~~y~~~k~k~~~e  229 (250)
                      ..   ...+....+++|+.|+.+++++++ .++++||++||.++++...        .+..+    .+.|+  .+|..+|
T Consensus        89 ~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~--~sK~~~e  163 (342)
T 2x4g_A           89 PS---RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYV--LCKWALD  163 (342)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHH--HHHHHHH
T ss_pred             cC---CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHH--HHHHHHH
Confidence            41   123455677999999999999885 5789999999999986322        22233    44555  6677777


Q ss_pred             HHHHh---cCCCEEEEecceEEe
Q 025619          230 DFVQK---SGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~~~---~gi~~~~vrPg~v~~  249 (250)
                      .+++.   .|++++++|||++||
T Consensus       164 ~~~~~~~~~g~~~~ilrp~~v~g  186 (342)
T 2x4g_A          164 EQAREQARNGLPVVIGIPGMVLG  186 (342)
T ss_dssp             HHHHHHHHTTCCEEEEEECEEEC
T ss_pred             HHHHHHhhcCCcEEEEeCCceEC
Confidence            66543   399999999999997

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.93  E-value=1.6e-25  Score=187.73  Aligned_cols=160  Identities=17%  Similarity=0.148  Sum_probs=119.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~------  148 (250)
                      ++++|+++||||+||||++++++|+++|++ |++++|+.  +..+++.+.....++.++.+|++|+ +++++++      
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            467899999999999999999999999997 99999986  3344444333234688899999998 7777543      


Q ss_pred             hCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cCC---CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSS---LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~---~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||...     .+..+..+++|+.|+.++++++     +.+   .++||++||..++.    +.+....|+
T Consensus        82 ~g~id~lv~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  152 (254)
T 1sby_A           82 LKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN----AIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTSHHHH
T ss_pred             cCCCCEEEECCccCC-----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc----CCCCchHHH
Confidence            468999999999752     2233456789999999999876     122   47899999998874    233345666


Q ss_pred             HHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|  .+++       .++...||++++|+||++.+
T Consensus       153 ~sK--~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t  186 (254)
T 1sby_A          153 ASK--AAVVSFTNSLAKLAPITGVTAYSINPGITRT  186 (254)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHSEEEEEEEECSEES
T ss_pred             HHH--HHHHHHHHHHHHHhccCCeEEEEEecCCccC
Confidence            544  4333       23344799999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.93  E-value=4.4e-26  Score=191.69  Aligned_cols=164  Identities=15%  Similarity=0.196  Sum_probs=121.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++|++|||||+||||++++++|+++|++|++++|++++  ++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999999876  555433221  346888999999999887654      46


Q ss_pred             CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCC-CeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSL-KRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|+||||||......   ...++....+++|+.|+.++++++.     .+. ++||++||..++.    +.+....|+.
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~  156 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ----GFPILSAYST  156 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc----CCCCchhHHH
Confidence            8999999999864221   1111223456889999999988762     355 8999999998874    2334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  188 (258)
T 3a28_C          157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVG  188 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEECCccC
Confidence            543     122234455679999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.93  E-value=6.1e-26  Score=192.67  Aligned_cols=166  Identities=10%  Similarity=0.061  Sum_probs=122.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh-----hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++. .++..+++  ...++.++++|++|.++++++.     +++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR  106 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999999999999997743 33332221  1456889999999998887643     468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|
T Consensus       107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----~~~~~~~Y~asK  182 (273)
T 3uf0_A          107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ----GGRNVAAYAASK  182 (273)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCSSCHHHHHHH
T ss_pred             CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC----CCCCChhHHHHH
Confidence            999999999865321   111222345688999999999876     24678999999998874    334455666555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...||++++|+||+|.+
T Consensus       183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  213 (273)
T 3uf0_A          183 HAVVGLTRALASEWAGRGVGVNALAPGYVVT  213 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcC
Confidence            4     2223345556899999999999853

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=6.4e-26  Score=191.52  Aligned_cols=165  Identities=13%  Similarity=0.124  Sum_probs=124.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++++.+++. .++.++++|++|.+++++++      ++++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999988877665543 56888999999999888654      5689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHH--
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~--  224 (250)
                      |+||||||.......   +.+..+..+++|+.|+.++++++.   +..++||++||..++     +.+....|+.+|.  
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-----~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----CHHHHHHHHHCSSHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-----CCCCcHHHHHHHHHH
Confidence            999999998642211   111123355889999999998762   125799999999887     1234455654442  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 ---KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 ---k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         .+.+..++...||++++|+||++.+
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t  184 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQT  184 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCC
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcC
Confidence               2233345566799999999999853

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1e-25  Score=190.91  Aligned_cols=165  Identities=17%  Similarity=0.124  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+++.+++  .++.++++|++|++++++++      ++++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999998877665443  24788999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......    ..++.+..+++|+.|+.++++++.    ++.++||++||..+..+    .+....|+.+|.
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~asKa  159 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----QAQAVPYVATKG  159 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----CTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC----CCCCcccHHHHH
Confidence            999999997642111    111123456889999999988762    23589999999876532    223345665443


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                           .+.+..++...||++++|+||++.+
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t  189 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWT  189 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCcccc
Confidence                 1222334456799999999999864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=6.5e-26  Score=193.17  Aligned_cols=170  Identities=16%  Similarity=0.074  Sum_probs=122.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------hhhHhhhhCcC--CCCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~  144 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+            .+++++...++  ...++.++++|++|.+++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999997            44444433221  145788999999999998


Q ss_pred             chhh------hCCCcEEEEcCcCCCcCC-CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccC-----
Q 025619          145 DPAI------FEGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFN-----  209 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~-----  209 (250)
                      ++++      ++++|+||||||...... ...+..+..+++|+.|+.++++++.   .+.++||++||..++...     
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence            7654      468999999999875321 1122234466899999999999873   245799999998876421     


Q ss_pred             --CCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          210 --ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 --~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        ..+.+....|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  212 (287)
T 3pxx_A          167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVN  212 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBS
T ss_pred             ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence              112234445665443     112223445579999999999985

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=3.8e-26  Score=191.05  Aligned_cols=165  Identities=10%  Similarity=0.086  Sum_probs=123.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+.+.+++.  ..++.++.+|++|++++++++      ++
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999887665543321  346888999999999888653      35


Q ss_pred             CCcEEEEcCcCCCcCCC--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      ++|+||||||.......  ..++....+++|+.|+.++++++     +.+.++||++||..++.    +..+...|+.+|
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK  163 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASSK  163 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----CCCCCcccHHHH
Confidence            89999999998643211  11112345578999999998876     24678999999998874    233445666544


Q ss_pred             HHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          224 YKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                        .+++       .++...|+++++++||++++
T Consensus       164 --~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t  194 (255)
T 1fmc_A          164 --AAASHLVRNMAFDLGEKNIRVNGIAPGAILT  194 (255)
T ss_dssp             --HHHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred             --HHHHHHHHHHHHHhhhcCcEEEEEecccCcc
Confidence              4433       33345699999999999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=3.3e-26  Score=195.13  Aligned_cols=166  Identities=15%  Similarity=0.180  Sum_probs=121.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ...+.++++|++|++++++++      +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999988776554332   223588999999999888654      5


Q ss_pred             CCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCcccccCCCCcchhhH
Q 025619          150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      +++|+||||||......    .+.++.+..+++|+.|+.++++++    + .+  .++||++||..+..    +......
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~  185 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT----PRPNSAP  185 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC----CCTTCHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC----CCCCChh
Confidence            78999999999864211    111222346689999988888865    2 22  57999999998873    3444566


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++...||++++|+||+|.
T Consensus       186 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  220 (281)
T 4dry_A          186 YTATKHAITGLTKSTALDGRMHDIACGQIDIGNAA  220 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCc
Confidence            765554     222334556689999999999874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.93  E-value=4.3e-26  Score=193.82  Aligned_cols=166  Identities=13%  Similarity=0.123  Sum_probs=126.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|.+++++++     .++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999999887666544331  457889999999999888653     258


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asK  185 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR----PKSVVTAYAATK  185 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----CCCCchhhHHHH
Confidence            999999999764321   111122345689999999999876     24668999999998874    334445676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++.
T Consensus       186 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~  215 (275)
T 4imr_A          186 AAQHNLIQSQARDFAGDNVLLNTLAPGLVD  215 (275)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEecccc
Confidence            4     222334556679999999999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=8.1e-26  Score=187.98  Aligned_cols=163  Identities=13%  Similarity=0.074  Sum_probs=122.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+++.++.  .+++++.+|++|.+++++++  ++++|+||
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC--PGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            467899999999999999999999999999999999988776655432  35677899999999988754  34799999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      ||||......   ...+..+..+++|+.|+.++++++.     .+ .++||++||..++.+    .++...|+.+|  ..
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK--~a  155 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT----FPNLITYSSTK--GA  155 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----CTTBHHHHHHH--HH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC----CCCcchhHHHH--HH
Confidence            9999764211   1111223456889999999988762     24 689999999988742    33445666544  44


Q ss_pred             HHH-------HHHhcCCCEEEEecceEEe
Q 025619          228 GED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      ++.       ++...|+++++++||++++
T Consensus       156 ~~~~~~~~a~~~~~~gi~v~~v~pg~v~t  184 (244)
T 1cyd_A          156 MTMLTKAMAMELGPHKIRVNSVNPTVVLT  184 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTT
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccC
Confidence            433       3344799999999998863

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=6.5e-26  Score=190.67  Aligned_cols=167  Identities=16%  Similarity=0.105  Sum_probs=122.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC---------CCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---------ETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~---------~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|++++.+++.+++..         .++.++.+|++|.+++++++ 
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999998887765543321         46788999999998887653 


Q ss_pred             -----hCCC-cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccCCCCc
Q 025619          149 -----FEGV-THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPW  213 (250)
Q Consensus       149 -----~~~~-D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~~~~~  213 (250)
                           ++++ |+||||||......   ...+..+..+++|+.|+.++++++.     .+ .++||++||..++.+    .
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----~  159 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG----N  159 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC----C
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC----C
Confidence                 4567 99999999864211   1112223456899999999998762     24 579999999877632    2


Q ss_pred             chhhHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          214 SIMNLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       214 ~~~~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ++...|+.+|..     +.+..++...||++++++||++++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  200 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIAT  200 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccc
Confidence            344566655431     122233445799999999999864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=6.2e-26  Score=189.34  Aligned_cols=163  Identities=17%  Similarity=0.156  Sum_probs=121.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-C--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-D--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|+++||||+||||++++++|+++|++|++++|+.++++++.+++ .  ..++.++.+|++|++++++++      +++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999999988776654332 1  346888999999999888654      358


Q ss_pred             CcEEEEcCcCCCcCC------CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          152 VTHVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~------~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +|+||||||......      ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~  156 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV----AFPGRSAYT  156 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc----CCCCchhHH
Confidence            999999999764221      011122345578999998877765     24678999999998874    233445666


Q ss_pred             HHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|  .+++       .++...|+++++++||++++
T Consensus       157 ~sK--~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  190 (250)
T 2cfc_A          157 TSK--GAVLQLTKSVAVDYAGSGIRCNAVCPGMIET  190 (250)
T ss_dssp             HHH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHH--HHHHHHHHHHHHHhcccCeEEEEEEeCcCcc
Confidence            544  4333       33445699999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=7.3e-26  Score=192.18  Aligned_cols=166  Identities=11%  Similarity=0.095  Sum_probs=120.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh-------hhCcCC--CCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-------LFGKQD--EETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~-------~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.+.       ..+.+.  ..++.++++|++|++++++++ 
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            5789999999999999999999999999999999998764322       111111  456888999999999988654 


Q ss_pred             -----hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||......   .+.+..+..+++|+.|+.++++++     +.+.++||++||..++...  ++..
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~  160 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA--WWGA  160 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH--HHHH
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC--CCCC
Confidence                 568999999999864321   111122345589999999999876     2456899999998887321  0233


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecce
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~  246 (250)
                      ...|+.+|.     .+.+..++...||++++|+||+
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~  196 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRT  196 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSB
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCc
Confidence            455665543     2223345567899999999995

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=1.6e-25  Score=194.50  Aligned_cols=163  Identities=20%  Similarity=0.268  Sum_probs=128.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~v  155 (250)
                      ..+++|+||||||+||||++++++|+++|++|++++|+.+...+..+.+  .+++++.+|++|.++++++ +.  ++|+|
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~-~~~~~~D~v   92 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERA-FDSFKPTHV   92 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHH-HHHHCCSEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHH-HhhcCCCEE
Confidence            3678899999999999999999999999999999999765433222222  4788999999999999875 56  89999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC---Ccc----hhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL---PWS----IMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~---~~~----~~~~y~~~k~k~~  227 (250)
                      |||||.....  ...+..  +++|+.|+.++++++. .+.++||++||.++++....   +..    +...|+  .+|.+
T Consensus        93 ih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~--~sK~~  166 (330)
T 2pzm_A           93 VHSAAAYKDP--DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYG--ISKTA  166 (330)
T ss_dssp             EECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHH--HHHHH
T ss_pred             EECCccCCCc--cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHH--HHHHH
Confidence            9999976532  111112  6899999999999884 57889999999999864321   111    334554  67888


Q ss_pred             HHHHHHhcCCCEEEEecceEEe
Q 025619          228 GEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.+++..+++++++||+.+||
T Consensus       167 ~e~~~~~~~~~~~~iR~~~v~g  188 (330)
T 2pzm_A          167 GEAFLMMSDVPVVSLRLANVTG  188 (330)
T ss_dssp             HHHHHHTCSSCEEEEEECEEEC
T ss_pred             HHHHHHHcCCCEEEEeeeeeEC
Confidence            9999888899999999999986

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.93  E-value=3.1e-25  Score=192.90  Aligned_cols=163  Identities=26%  Similarity=0.383  Sum_probs=117.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh---hhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~---~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|+||||||+||||++++++|+++|++|++++|+.+..+   .+.+ +.  ..+++++.+|++|.++++++ +.++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEA-IKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHH-HTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHH-HcCCCEE
Confidence            5689999999999999999999999999999999876332   2211 11  12578899999999999875 7899999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCC--------CCcc----------h
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNE--------LPWS----------I  215 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~--------~~~~----------~  215 (250)
                      ||+|+....  ...++....+++|+.|+.+++++++ .+ +++||++||.+++....        ..+.          +
T Consensus        82 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            999986421  1111112366899999999999884 45 78999999987543110        0010          1


Q ss_pred             hhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          216 MNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       216 ~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ...|+  .+|..+|.++    ++.|++++++||+.|||
T Consensus       160 ~~~Y~--~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~G  195 (337)
T 2c29_D          160 AWMYF--VSKTLAEQAAWKYAKENNIDFITIIPTLVVG  195 (337)
T ss_dssp             THHHH--HHHHHHHHHHHHHHHHHTCCEEEEEECEEES
T ss_pred             cchHH--HHHHHHHHHHHHHHHHcCCcEEEEeCCceEC
Confidence            22455  5566666544    35699999999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=8.3e-26  Score=192.92  Aligned_cols=165  Identities=14%  Similarity=0.169  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-------hhhhCcCC--CCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-------TTLFGKQD--EETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-------~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.       ++..+++.  ..++.++++|++|.+++++++ 
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            57899999999999999999999999999999999997632       22221111  457889999999999988654 


Q ss_pred             -----hCCCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||........   .+..+..+++|+.|+.++++++     +.+.++||++||..+....   +..
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---~~~  162 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK---WLR  162 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---GSC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---CCC
Confidence                 56999999999987532111   1112335579999999999976     2356799999998877421   123


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecce
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~  246 (250)
                      ...|+.+|.     .+.+..++...||++++|+||+
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~  198 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT  198 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence            356665543     2223345566899999999994

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=7.2e-26  Score=190.52  Aligned_cols=166  Identities=15%  Similarity=0.164  Sum_probs=124.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++ ..++.++.+|++|++++++++      ++++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            567899999999999999999999999999999999987776655443 357889999999999888653      3589


Q ss_pred             cEEEEcCcCCCcCCC---------CCCCCCCcceehHHHHHHHHHHc-----cC------CCCeEEEEccCcccccCCCC
Q 025619          153 THVICCTGTTAFPSR---------RWDGDNTPEKVDWEGVRNLVSAL-----PS------SLKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---------~~~~~~~~~~~N~~g~~~l~~a~-----~~------~~~~iV~iSS~~~~~~~~~~  212 (250)
                      |+||||||.......         ..+.....+++|+.|+.++++++     +.      +.++||++||..++.+    
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----  163 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG----  163 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC----
Confidence            999999998643211         11112345578999999998876     12      5679999999988742    


Q ss_pred             cchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       213 ~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ......|+.+|.     .+.+..++...||++++|+||++.+
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  205 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGT  205 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccC
Confidence            233456665543     1222344556799999999998853

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.93  E-value=9.6e-26  Score=189.68  Aligned_cols=166  Identities=18%  Similarity=0.197  Sum_probs=123.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++.+|++|.+++++++      ++++
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            568899999999999999999999999999999999999888766544 457889999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----c-C----CCCeEEEEccCcccccCCCCcchhhHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----P-S----SLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~-~----~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      |+||||||....+..    +.+.....+++|+.|+.++++++    + .    ..++||++||..++.    +.+....|
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y  160 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----PRPNLAWY  160 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----CCTTCHHH
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----CCCCccHH
Confidence            999999998652211    11122345688999999988876    1 1    146799999998873    33444566


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|.     .+.+..++...||++++|+||++.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  195 (261)
T 3n74_A          161 NATKGWVVSVTKALAIELAPAKIRVVALNPVAGET  195 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence            65553     2223344556799999999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.93  E-value=2.2e-26  Score=202.65  Aligned_cols=163  Identities=15%  Similarity=0.149  Sum_probs=127.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCC-CccCcchhhhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~-d~~~~~~~~~~~~D~vi  156 (250)
                      .|++|+||||||+|+||++++++|+++ |++|++++|++++.+.+..   ..+++++.+|++ |.++++++ +.++|+||
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~~d~~~~~~~-~~~~d~Vi   96 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK---HERMHFFEGDITINKEWVEYH-VKKCDVIL   96 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG---STTEEEEECCTTTCHHHHHHH-HHHCSEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc---CCCeEEEeCccCCCHHHHHHH-hccCCEEE
Confidence            467889999999999999999999998 9999999999877655432   358999999999 88888865 67999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-CCc-------------chhhHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-LPW-------------SIMNLFGV  221 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-~~~-------------~~~~~y~~  221 (250)
                      |+||..... ..+.++...+++|+.|+.+++++++ .+ ++||++||.++|+... .++             .+.+.|+ 
T Consensus        97 h~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~-  173 (372)
T 3slg_A           97 PLVAIATPA-TYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYA-  173 (372)
T ss_dssp             ECBCCCCHH-HHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHH-
T ss_pred             EcCccccHH-HHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHH-
Confidence            999976521 1112334456889999999999985 46 8999999999887421 111             2333555 


Q ss_pred             HHHHHHHHHHHHhc---CCCEEEEecceEEe
Q 025619          222 LKYKKMGEDFVQKS---GLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e~~~~~~---gi~~~~vrPg~v~~  249 (250)
                       .+|.++|++++..   |++++++||+.|||
T Consensus       174 -~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G  203 (372)
T 3slg_A          174 -CSKQLMDRVIWGYGMEGLNFTLFRPFNWIG  203 (372)
T ss_dssp             -HHHHHHHHHHHHHHTTTCEEEEEEECSEEC
T ss_pred             -HHHHHHHHHHHHHHHCCCCEEEEccccccC
Confidence             6777788777655   99999999999987

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.93  E-value=1.3e-24  Score=178.13  Aligned_cols=151  Identities=17%  Similarity=0.155  Sum_probs=116.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||+|+||++++++|+++|++|++++|++++.+.+.    ..+++++.+|++|.++  ++ ++++|+||||||..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~D~~d~~~--~~-~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----GATVATLVKEPLVLTE--AD-LDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----CTTSEEEECCGGGCCH--HH-HTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----CCCceEEecccccccH--hh-cccCCEEEECCccC
Confidence            36999999999999999999999999999999998877654    3578999999999988  34 78999999999976


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC--------Ccc--hhhHHHHHHHHHHHHH-
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL--------PWS--IMNLFGVLKYKKMGED-  230 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~--------~~~--~~~~y~~~k~k~~~e~-  230 (250)
                      .      ..  ...++|+.++.+++++++ .+ +++|++||.+++.....        +..  +...|+.+|...+... 
T Consensus        74 ~------~~--~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~  144 (224)
T 3h2s_A           74 W------GS--GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQF  144 (224)
T ss_dssp             T------TS--SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred             C------Cc--chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHH
Confidence            2      11  124789999999999996 46 99999999876542211        111  2456665554333222 


Q ss_pred             HHHhcCCCEEEEecceEEe
Q 025619          231 FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.++.|++++++|||++++
T Consensus       145 ~~~~~~i~~~ivrp~~v~g  163 (224)
T 3h2s_A          145 LQMNANVNWIGISPSEAFP  163 (224)
T ss_dssp             HTTCTTSCEEEEEECSBCC
T ss_pred             HHhcCCCcEEEEcCccccC
Confidence            2346899999999999985

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=2.4e-25  Score=186.19  Aligned_cols=166  Identities=12%  Similarity=0.077  Sum_probs=122.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCe-eEEEeeCCCccCcchhh-----hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAI-----FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~Dl~d~~~~~~~~-----~~~~  152 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++++++.+++ ..++ .++.+|++|.+++++++     ++++
T Consensus         8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A            8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            467899999999999999999999999999999999988776654433 2345 78999999999888654     3689


Q ss_pred             cEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.........   +..+..+++|+.|+.++++++     +.+.++||++||..++...  +..+...|+.+| 
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~Y~~sK-  163 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN--RPQFASSYMASK-  163 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--SSSCBHHHHHHH-
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC--CCCcchHHHHHH-
Confidence            99999999865321111   111335578999988887765     2467899999999887432  222235666544 


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                       .+++       .++...|+++++|+||++++
T Consensus       164 -~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t  194 (254)
T 2wsb_A          164 -GAVHQLTRALAAEWAGRGVRVNALAPGYVAT  194 (254)
T ss_dssp             -HHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             -HHHHHHHHHHHHHHhhcCeEEEEEEecccCc
Confidence             4443       33445699999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=3e-26  Score=199.37  Aligned_cols=165  Identities=18%  Similarity=0.228  Sum_probs=125.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhhhC--CCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~v  155 (250)
                      ++|+||||||+||||++++++|+++|++|++++|+.++.++..+.+   ...+++++.+|++|.++++++ +.  ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARI-FDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHH-HHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHH-HhccCCcEE
Confidence            4679999999999999999999999999999999865543322111   134788999999999999876 44  89999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~  227 (250)
                      |||||..... ..++.....+++|+.++.+++++++ .+.++||++||.++|+..       ..+..+.+.|+  .+|.+
T Consensus        83 ih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~--~sK~~  159 (341)
T 3enk_A           83 IHFAALKAVG-ESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYG--QTKLM  159 (341)
T ss_dssp             EECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHH--HHHHH
T ss_pred             EECccccccC-ccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhH--HHHHH
Confidence            9999976421 1112233466889999999999884 577899999999998632       23444556666  55666


Q ss_pred             HHHHHHh----c-CCCEEEEecceEEe
Q 025619          228 GEDFVQK----S-GLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~----~-gi~~~~vrPg~v~~  249 (250)
                      +|.+++.    . |++++++||+.+||
T Consensus       160 ~e~~~~~~~~~~~~~~~~~lRp~~v~G  186 (341)
T 3enk_A          160 AEQILRDVEAADPSWRVATLRYFNPVG  186 (341)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEEECEEEC
T ss_pred             HHHHHHHHhhcCCCceEEEEeeccccC
Confidence            6665543    3 59999999999997

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.92  E-value=4.3e-25  Score=180.41  Aligned_cols=149  Identities=13%  Similarity=0.182  Sum_probs=114.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||+|+||++++++|+++|++|++++|++++.+.+.     .+++++.+|++|.++  ++ ++++|+||||||..
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~--~~-~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL--SD-LSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH--HH-HTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh--hh-hcCCCEEEECCcCC
Confidence            47999999999999999999999999999999998876643     478899999999888  44 78999999999974


Q ss_pred             CcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC--------CCcchhhHHHHHHHHHHHHHHHH
Q 025619          163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       163 ~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~--------~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      ..          ..++|+.++.+++++++ .+.+++|++||.+++....        .+..+...|+.+|...+....++
T Consensus        73 ~~----------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~  142 (221)
T 3ew7_A           73 PD----------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK  142 (221)
T ss_dssp             TT----------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHH
T ss_pred             cc----------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            21          23679999999999996 4689999999988764221        12223445665555544444466


Q ss_pred             --hcCCCEEEEecceEEe
Q 025619          234 --KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 --~~gi~~~~vrPg~v~~  249 (250)
                        +.|++++++|||++++
T Consensus       143 ~~~~gi~~~ivrp~~v~g  160 (221)
T 3ew7_A          143 SHQAEFSWTYISPSAMFE  160 (221)
T ss_dssp             TTTTTSCEEEEECSSCCC
T ss_pred             hhccCccEEEEeCcceec
Confidence              7899999999999985

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.92  E-value=1.1e-25  Score=187.32  Aligned_cols=163  Identities=13%  Similarity=0.101  Sum_probs=122.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|++++++++.++.  .+.+++.+|++|.+++++++  ++++|+||
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC--PGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            467899999999999999999999999999999999988877665433  25677899999999988754  35799999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~  227 (250)
                      ||||......   ...+..+..+++|+.|+.++++++.     .+ .++||++||..++.    +.++...|+.+  |.+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~s--K~a  155 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----AVTNHSVYCST--KGA  155 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHH--HHH
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc----CCCCCchHHHH--HHH
Confidence            9999764211   1111223456889999999888762     24 68999999998874    23344566654  444


Q ss_pred             HHH-------HHHhcCCCEEEEecceEEe
Q 025619          228 GED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                      ++.       ++...||++++++||++++
T Consensus       156 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t  184 (244)
T 3d3w_A          156 LDMLTKVMALELGPHKIRVNAVNPTVVMT  184 (244)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBTT
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeccccc
Confidence            443       3344799999999999853

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.92  E-value=5.1e-26  Score=191.22  Aligned_cols=162  Identities=14%  Similarity=0.109  Sum_probs=118.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D  153 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++..+..    ..++.++++|++|++++++++     ++++|
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL----GDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT----CTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            568899999999999999999999999999999999765543322    457889999999999988653     46899


Q ss_pred             EEEEcCcCCCcC-------CCCCCCCCCcceehHHHHHHHHHHc-----c--------CCCCeEEEEccCcccccCCCCc
Q 025619          154 HVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSAL-----P--------SSLKRIVLVSSVGVTKFNELPW  213 (250)
Q Consensus       154 ~vi~~Ag~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~a~-----~--------~~~~~iV~iSS~~~~~~~~~~~  213 (250)
                      +||||||.....       ....+..+..+++|+.|+.++++++     +        .+.++||++||..++    .+.
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~~  157 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF----DGQ  157 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC------CCH
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc----CCC
Confidence            999999976421       1122223456689999999998876     2        245689999999887    344


Q ss_pred             chhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          214 SIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       214 ~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .....|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~  197 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCcc
Confidence            45566665554     222334556689999999999985

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.92  E-value=3.6e-26  Score=191.44  Aligned_cols=164  Identities=16%  Similarity=0.097  Sum_probs=112.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.  ..++.++.+|++|++++++++      ++
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5688999999999999999999999999999999999988776654332  456888999999999888654      46


Q ss_pred             CCcEEEEcCcCCCc-C-----CCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          151 GVTHVICCTGTTAF-P-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~-~-----~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++|+||||||.... .     ..+.+..+..+++|+.|+.++++++     +.+.++||++||..++.       +...|
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------~~~~Y  158 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-------YSNYY  158 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-------CCchh
Confidence            89999999998421 1     1111122345689999988877765     34678999999998872       22345


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|.     .+.+..++...||++++|+||++.+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  193 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDT  193 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcc
Confidence            54333     2222344455799999999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=1.7e-25  Score=191.90  Aligned_cols=166  Identities=13%  Similarity=0.086  Sum_probs=123.7

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++.+|++|.+++++++      
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999887765543321   346889999999999887654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc------cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~------~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      ++++|+||||||......   ...++....+++|+.|+.++++++      +.+.++||++||..++.+    ..+...|
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y  177 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----SGFVVPS  177 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----CTTCHHH
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC----CCCcchh
Confidence            467899999999754211   111122345688999999998766      235579999999987742    2334566


Q ss_pred             HHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+  |.+++       .++...||++++|+||++.+
T Consensus       178 ~~s--K~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t  212 (302)
T 1w6u_A          178 ASA--KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKT  212 (302)
T ss_dssp             HHH--HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHH--HHHHHHHHHHHHHHhhhcCcEEEEEeeccCCC
Confidence            644  44443       33345799999999999853

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.92  E-value=1.3e-25  Score=198.66  Aligned_cols=163  Identities=15%  Similarity=0.013  Sum_probs=125.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++|+||||||+|+||++++++|+++|++|++++|++++.....    ..+++++.+|++|.++++++ +.++|+|||+|
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vih~A  101 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCLKV-TEGVDHVFNLA  101 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHHHH-HTTCSEEEECC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----cCCceEEECCCCCHHHHHHH-hCCCCEEEECc
Confidence            36789999999999999999999999999999999876533221    24688999999999999875 68999999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC--------------CcchhhHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL--------------PWSIMNLFGVLKY  224 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~--------------~~~~~~~y~~~k~  224 (250)
                      |..........+....+++|+.|+.+++++++ .++++||++||.++++....              +..+.+.|+  .+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~--~s  179 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG--LE  179 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHH--HH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhH--HH
Confidence            97532100022344566899999999999884 57889999999988863210              233445565  55


Q ss_pred             HHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          225 KKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      |..+|.++    ++.|++++++|||++||
T Consensus       180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G  208 (379)
T 2c5a_A          180 KLATEELCKHYNKDFGIECRIGRFHNIYG  208 (379)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEeCceeC
Confidence            66666555    34699999999999997

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=1.9e-25  Score=187.12  Aligned_cols=159  Identities=16%  Similarity=0.096  Sum_probs=118.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+++.     +   ..++..+.+|++|++++++++      ++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E---QYPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S---CCSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h---cCCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999998652     1   123788999999999888654      4589


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT----PRIGMSAYGASKA  151 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----CCCCCchHHHHHH
Confidence            999999998642211   11122345688999999998876     34678999999998874    3344456665543


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     +.+..++...||++++|+||++.+
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  181 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDT  181 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccC
Confidence            1     122334556799999999999864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.5e-25  Score=190.01  Aligned_cols=169  Identities=17%  Similarity=0.223  Sum_probs=123.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+ .++.+++.+++.  ..++.++.+|++|++++++++      
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999998665 455554433321  457889999999999888654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++++|+||||||......   ...++.+..+++|+.|+.++++++.   ...++||++||..+..   .+.+....|+.+
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~---~~~~~~~~Y~as  183 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL---VPWPGISLYSAS  183 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC---CCSTTCHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc---CCCCCchHHHHH
Confidence            568999999999865321   1112224456889999999998772   2457999999976652   123445667655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.     .+.+..++...||++++|+||+|.+
T Consensus       184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T  215 (271)
T 3v2g_A          184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDT  215 (271)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcC
Confidence            54     2223345566799999999999853

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=4e-26  Score=191.62  Aligned_cols=164  Identities=13%  Similarity=0.038  Sum_probs=118.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++|++|||||+||||++++++|+++|++|++++|+.+.  .+++.+  ...++.++.+|++|++++++++      +++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIAR--HGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHT--TSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh--cCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            568999999999999999999999999999999998651  122221  1346788899999999988654      458


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+|
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~sK  155 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG----STGKAAYVAAK  155 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC----CTTBHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC----CCCchhHHHHH
Confidence            999999999764221   111122345688999988877765     356789999999988742    23345666544


Q ss_pred             HH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 YK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..     +.+..++...||++++|+||++.+
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  186 (255)
T 2q2v_A          156 HGVVGLTKVVGLETATSNVTCNAICPGWVLT  186 (255)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEEESSBCC
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcC
Confidence            31     122234455799999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.92  E-value=6.8e-26  Score=191.01  Aligned_cols=165  Identities=15%  Similarity=0.128  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F-  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~-  149 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|.+++++++      + 
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999887665543321  346888999999998888654      3 


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..+.....+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~  166 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----ASVGSIYSA  166 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------CCHHHH
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC----CCCCchHHH
Confidence            789999999997642111   11112335588999999999877     246789999999988742    233455664


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|  ..++       .++...||++++|+||++++
T Consensus       167 sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  199 (266)
T 1xq1_A          167 TK--GALNQLARNLACEWASDGIRANAVAPAVIAT  199 (266)
T ss_dssp             HH--HHHHHHHHHHHHHHGGGTCEEEEEECCSCC-
T ss_pred             HH--HHHHHHHHHHHHHHhHhCcEEEEEeeCCCcc
Confidence            44  4433       33445699999999999864

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.92  E-value=2.7e-25  Score=190.30  Aligned_cols=166  Identities=11%  Similarity=0.069  Sum_probs=123.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC---CCCeeEEEeeCCCcc------------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD---EETLQVCKGDTRNPK------------  142 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~------------  142 (250)
                      ++++|++|||||+||||++++++|+++|++|++++ |++++++++.+++.   ..++.++++|++|.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            46789999999999999999999999999999999 99887766544331   457889999999998            


Q ss_pred             -----Ccchhh------hCCCcEEEEcCcCCCcCCC-CC----------------CCCCCcceehHHHHHHHHHHc----
Q 025619          143 -----DLDPAI------FEGVTHVICCTGTTAFPSR-RW----------------DGDNTPEKVDWEGVRNLVSAL----  190 (250)
Q Consensus       143 -----~~~~~~------~~~~D~vi~~Ag~~~~~~~-~~----------------~~~~~~~~~N~~g~~~l~~a~----  190 (250)
                           ++++++      ++++|+||||||....... +.                +..+..+++|+.|+.++++++    
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 776543      4689999999998642211 11                111235588999999998876    


Q ss_pred             -cCC------CCeEEEEccCcccccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          191 -PSS------LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       191 -~~~------~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                       +.+      .++||++||..++.    +.+....|+.+|.     .+.+..++...||++++|+||++.
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  231 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV  231 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HhcCCCCCCCCcEEEEEechhhcC----CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCcc
Confidence             234      58999999998874    3344556765554     223334556689999999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.92  E-value=7.1e-26  Score=196.86  Aligned_cols=167  Identities=16%  Similarity=0.162  Sum_probs=119.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-----hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-----PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-----~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+     .++++++.+...  ..++.++.+|++|++++++++   
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999998886     333443332211  457889999999999988754   


Q ss_pred             ---hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 ---FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                         ++++|+||||||.......   ..++....+++|+.|+.++++++    + .+.++||++||..+....   .+...
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~---~~~~~  158 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT---PPYLA  158 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---CSSCH
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC---CCcch
Confidence               4699999999998653221   11122345689999999999976    2 467899999999887321   12234


Q ss_pred             HHHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|..     +.+..++...||++++|+||+|.
T Consensus       159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~  194 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFT  194 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence            56654431     12224455679999999999985

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.92  E-value=7.5e-26  Score=190.81  Aligned_cols=160  Identities=16%  Similarity=0.174  Sum_probs=119.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.+       ..++.++++|++|++++++++      ++++
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            457899999999999999999999999999999999876433       236889999999999988654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++...  +..+...|+.  +
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--~~~~~~~Y~~--s  173 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM--VGMPSALASL--T  173 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB--TTCCCHHHHH--H
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC--CCCccHHHHH--H
Confidence            99999999865321   111122345579999999999876     3567899999998876422  1223345554  4


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |.+++       .++...||++++|+||++.+
T Consensus       174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  205 (260)
T 3un1_A          174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKT  205 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCC
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCC
Confidence            44443       33445699999999999864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=1.5e-25  Score=187.19  Aligned_cols=165  Identities=13%  Similarity=0.083  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+++.+.+. ..+++++.+|++|++++++++      +++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999999887766543332 257889999999999888654      457


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----c-CCC-CeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~-~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||.......   ..+.....+++|+.|+.++++++    + .+. ++||++||..++.+    .+....|+.+
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~~s  158 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG----DPSLGAYNAS  158 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC----CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC----CCCCccchHH
Confidence            9999999997642211   11112345688999988777654    3 455 79999999988742    3344566655


Q ss_pred             HHHHHHH-------HHHH--hcCCCEEEEecceEEe
Q 025619          223 KYKKMGE-------DFVQ--KSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e-------~~~~--~~gi~~~~vrPg~v~~  249 (250)
                      |  .+++       .++.  ..||++++++||++.+
T Consensus       159 K--~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t  192 (251)
T 1zk4_A          159 K--GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKT  192 (251)
T ss_dssp             H--HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred             H--HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcc
Confidence            4  3333       2223  6799999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.92  E-value=4.2e-25  Score=188.19  Aligned_cols=164  Identities=18%  Similarity=0.152  Sum_probs=122.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++++++.+.. ..++.++.+|++|.+++++++      ++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            468899999999999999999999999999999999998887765544 457889999999999887654      5789


Q ss_pred             cEEEEcCcCCCcCCCCC----C----CCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFPSRRW----D----GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~----~----~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |+||||||.........    +    ..+..+++|+.|+.++++++    ++..++||++||..++.    +......|+
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  156 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY----PNGGGPLYT  156 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----SSSSCHHHH
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc----CCCCCchhH
Confidence            99999999864211100    0    01234578999999999876    22347999999998873    334445666


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|..     +.+..++... |++++|+||++.
T Consensus       157 asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~  188 (281)
T 3zv4_A          157 ATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMN  188 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSC
T ss_pred             HHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCc
Confidence            55531     1222333444 999999999874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=4.7e-26  Score=193.33  Aligned_cols=163  Identities=19%  Similarity=0.213  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +|+ |++|||||+||||++++++|+++|++|++++|++++++++.+++.. .++.++.+|++|++++++++      +++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            345 8999999999999999999999999999999999887766544322 46888999999998887653      467


Q ss_pred             CcEEEEcCcCCCc-CC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCC-eEEEEccCcccccCCCCcchhhHHHH
Q 025619          152 VTHVICCTGTTAF-PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLK-RIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       152 ~D~vi~~Ag~~~~-~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~-~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +|+||||||.... ..   .+.+..+..+++|+.|+.++++++     +.+.+ +||++||..++.    +.+....|+.
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----~~~~~~~Y~a  173 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----PYPGSHVYGG  173 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc----CCCCCchHHH
Confidence            8999999997542 11   111222345688999988887765     34567 999999998873    2333455664


Q ss_pred             HHHHHHHHHHH-------HhcCCCEEEEecceEE
Q 025619          222 LKYKKMGEDFV-------QKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e~~~-------~~~gi~~~~vrPg~v~  248 (250)
                        +|..++.+.       ...||++++|+||++.
T Consensus       174 --sKaa~~~l~~~la~el~~~gIrvn~v~PG~v~  205 (272)
T 2nwq_A          174 --TKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCE  205 (272)
T ss_dssp             --HHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC
T ss_pred             --HHHHHHHHHHHHHHHhCccCeEEEEEEcCCCc
Confidence              454444333       3469999999999885

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.92  E-value=1.4e-25  Score=192.33  Aligned_cols=168  Identities=13%  Similarity=0.087  Sum_probs=123.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh--hhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~--~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.  +..+++.+..  ...++.++.+|++|.+++++++     
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999873  3333332221  1457888999999999887654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 -FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                       ++++|+||||||......    ...+..+..+++|+.|+.++++++.   ...++||++||..++.    +......|+
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~  200 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ----PSPHLLDYA  200 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS----CCTTCHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc----CCCCchHHH
Confidence             578999999999754211    1112224466899999999999873   2236999999999884    334455666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|.     .+.+..++...||++++|+||+|.+
T Consensus       201 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  234 (294)
T 3r3s_A          201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT  234 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcc
Confidence            5554     2223344566799999999999853

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=1.5e-25  Score=189.12  Aligned_cols=167  Identities=14%  Similarity=0.042  Sum_probs=125.8

Q ss_pred             CCCCCCEEEEEcCCC-hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh-----
Q 025619           78 PASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG-~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ..+++|++|||||+| |||++++++|+++|++|++++|+.+++++..+++   ...++.++++|++|.+++++++     
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            357899999999986 8999999999999999999999998776654433   2357899999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cC-CCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~-~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                       ++++|+||||||......   ...+..+..+++|+.|+.++++++     +. +.++||++||..++.    +......
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~  173 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR----AQHSQSH  173 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC----CCTTCHH
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC----CCCCCch
Confidence             468999999999865321   111122345688999999999876     22 567999999998873    3444566


Q ss_pred             HHHHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|..     +.+..++...||++++|+||++.
T Consensus       174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  208 (266)
T 3o38_A          174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR  208 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCccc
Confidence            7655541     22224455679999999999875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.92  E-value=5e-26  Score=194.41  Aligned_cols=167  Identities=14%  Similarity=0.139  Sum_probs=120.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCC---CCCeeEEEeeCCC----ccCcchhh--
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD---EETLQVCKGDTRN----PKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~---~~~~~~v~~Dl~d----~~~~~~~~--  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+. ++++++.+++.   ..++.++++|++|    .+++++++  
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            57889999999999999999999999999999999998 76655543321   3568899999999    77776543  


Q ss_pred             ----hCCCcEEEEcCcCCCcCCC-----CC--------CCCCCcceehHHHHHHHHHHc----c-CC------CCeEEEE
Q 025619          149 ----FEGVTHVICCTGTTAFPSR-----RW--------DGDNTPEKVDWEGVRNLVSAL----P-SS------LKRIVLV  200 (250)
Q Consensus       149 ----~~~~D~vi~~Ag~~~~~~~-----~~--------~~~~~~~~~N~~g~~~l~~a~----~-~~------~~~iV~i  200 (250)
                          ++++|+||||||.......     ..        +.....+++|+.|+.++++++    + .+      .++||++
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i  179 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL  179 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence                4689999999998642211     00        011234578999999988866    2 23      5799999


Q ss_pred             ccCcccccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          201 SSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       201 SS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ||..++.    +......|+.+|.     .+.+..++...||++++|+||++.+
T Consensus       180 sS~~~~~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  229 (288)
T 2x9g_A          180 CDAMVDQ----PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL  229 (288)
T ss_dssp             CCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSC
T ss_pred             ecccccC----CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccC
Confidence            9998874    3344566765553     2233345556799999999998853

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.92  E-value=1.2e-25  Score=194.88  Aligned_cols=167  Identities=11%  Similarity=0.070  Sum_probs=123.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC------------hhhHhhhhCcC--CCCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQ--DEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~------------~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~  144 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+            .+++++..+.+  ...++.++++|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999999999999999999999999999999886            44444433221  145788999999999998


Q ss_pred             chhh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccC
Q 025619          145 DPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFN  209 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~  209 (250)
                      ++++      ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.+ .++||++||..++.  
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~--  200 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR--  200 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC--
Confidence            8654      568999999999865321   111122345689999999998876     222 57899999998873  


Q ss_pred             CCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          210 ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                        +.+....|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       201 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  243 (317)
T 3oec_A          201 --GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNT  243 (317)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence              3344566665553     2223345566799999999999853

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.92  E-value=2.8e-25  Score=186.98  Aligned_cols=165  Identities=13%  Similarity=0.074  Sum_probs=119.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|++++++++       +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999999887766543321  346788999999998887643       4


Q ss_pred             CCCcEEEEcCcC--C------CcCC--CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcc
Q 025619          150 EGVTHVICCTGT--T------AFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       150 ~~~D~vi~~Ag~--~------~~~~--~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                      +++|+||||||.  .      ..+.  .+.+.....+++|+.|+.++.+++     +.+.++||++||..++...     
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  156 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-----  156 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-----
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-----
Confidence            689999999953  2      1111  111112345578999988777654     3466899999999887421     


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +...|+.+|.     .+.+..++...||++++|+||++.
T Consensus       157 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (260)
T 2qq5_A          157 FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQ  195 (260)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccc
Confidence            2356665543     122234455679999999999874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.92  E-value=1.8e-25  Score=188.80  Aligned_cols=154  Identities=16%  Similarity=0.105  Sum_probs=116.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++         ..++.++++|++|.+++++++      ++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999998654         236788999999999888654      4689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   ..+.....+++|+.|+.++++++     +.+.++||++||..++.    +..+...|+.+| 
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK-  150 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----ITKNASAYVTSK-  150 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS----CCTTBHHHHHHH-
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc----CCCCchhHHHHH-
Confidence            999999998643211   11122345688999998888876     24568999999998874    334445666554 


Q ss_pred             HHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          225 KKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                       .+++       .++... |++++|+||++.
T Consensus       151 -~a~~~~~~~la~e~~~~-i~vn~v~PG~v~  179 (264)
T 2dtx_A          151 -HAVIGLTKSIALDYAPL-LRCNAVCPATID  179 (264)
T ss_dssp             -HHHHHHHHHHHHHHTTT-SEEEEEEECSBC
T ss_pred             -HHHHHHHHHHHHHhcCC-cEEEEEEeCCCc
Confidence             4333       333344 999999999875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=9.4e-26  Score=190.09  Aligned_cols=165  Identities=16%  Similarity=0.098  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+  ||||++++++|+++|++|++++|+++   ..+++.+..  ..+.++++|++|++++++++     
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence            5678999999999  99999999999999999999999875   333332222  24788999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHccCC---CCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~~~---~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||....     +  ....++.+..+++|+.|+.++++++.+.   .++||++||..++.    +.+...
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  158 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----VVPKYN  158 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----BCTTCH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC----CCCCch
Confidence             4689999999997642     1  1112223446689999999999987432   36999999988773    233345


Q ss_pred             HHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|..     +.+..++...||++++|+||++.+
T Consensus       159 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  195 (261)
T 2wyu_A          159 VMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT  195 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcC
Confidence            66655431     122234456799999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.92  E-value=2.1e-25  Score=188.90  Aligned_cols=168  Identities=15%  Similarity=0.109  Sum_probs=122.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++++ .+..+++.+++.  ..++.++++|++|.+++++++      
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999998765 444444433221  457889999999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++++|+||||||......   .+.++.+..+++|+.|+.++++++.   ...++||++||..+..   .+.+....|+.+
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~~Y~as  170 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---FSVPKHSLYSGS  170 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---CCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---CCCCCCchhHHH
Confidence            568999999999875321   1122234456899999999998762   2246999999987431   233445667655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++...||++++|+||++.
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  201 (270)
T 3is3_A          171 KGAVDSFVRIFSKDCGDKKITVNAVAPGGTV  201 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence            54     222334556689999999999885

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.92  E-value=1.5e-25  Score=186.75  Aligned_cols=164  Identities=15%  Similarity=0.104  Sum_probs=111.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|+++ .|++++.+++.+.+.  ..++.++.+|++|++++++++      +
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999 666665554433221  356889999999999888653      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..+..    +.+....|+.
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~  157 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII----GNAGQANYAA  157 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------CHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc----CCCCCcHhHH
Confidence            58999999999864211   122233456689999999888876     24678999999986653    2233456665


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|  .+++       .++...||++++++||++.
T Consensus       158 sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  189 (247)
T 2hq1_A          158 SK--AGLIGFTKSIAKEFAAKGIYCNAVAPGIIK  189 (247)
T ss_dssp             HH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HH--HHHHHHHHHHHHHHHHcCcEEEEEEEEEEe
Confidence            44  4333       3345569999999999875

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=1.1e-25  Score=189.04  Aligned_cols=167  Identities=16%  Similarity=0.158  Sum_probs=122.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+||||||+||||++++++|+++|++|++++| ++++.+++.+++.  ..++.++.+|++|++++++++      +
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999 7776655433221  346788999999999887653      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++     +.+ .++||++||..++.    +.++...|+
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~  159 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----PWPLFVHYA  159 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC----CCCCccHHH
Confidence            58999999999764211   111122345688999999888865     234 68999999988773    344456676


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          221 VLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|..     +.+..++...||++++++||++.+
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  193 (261)
T 1gee_A          160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT  193 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCC
Confidence            55531     122234455799999999999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.92  E-value=7.9e-25  Score=186.23  Aligned_cols=150  Identities=23%  Similarity=0.268  Sum_probs=120.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|+||||| +|+||++++++|+++|++|++++|++++.        ..+++++.+|++|.+++++++-+++|+|||+||
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            457899999 59999999999999999999999987652        357889999999999999763334999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      ...      .+....+++|+.++.+++++++ .++++||++||.++|+..       +.+..+.+.|+  .+|..+|++ 
T Consensus        73 ~~~------~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~-  143 (286)
T 3gpi_A           73 ASE------YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG--KRMLEAEAL-  143 (286)
T ss_dssp             HHH------HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH--HHHHHHHHH-
T ss_pred             CCC------CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh--HHHHHHHHH-
Confidence            743      1334566899999999999995 578999999999998742       23344556665  678888888 


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      ++. ++++++||+.+||
T Consensus       144 ~~~-~~~~ilR~~~v~G  159 (286)
T 3gpi_A          144 LAA-YSSTILRFSGIYG  159 (286)
T ss_dssp             GGG-SSEEEEEECEEEB
T ss_pred             Hhc-CCeEEEecccccC
Confidence            767 9999999999997

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=7.4e-26  Score=188.53  Aligned_cols=165  Identities=15%  Similarity=0.052  Sum_probs=122.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++.   ..++.++.+|++|++++++++      +
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999887665543221   346888999999999888654      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~  159 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG----NVGQVNYST  159 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC----CCCCchHHH
Confidence            58999999999764211   111122345688999998888765     246789999999876532    223345664


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|  ..++       .++...|+++++++||++.+
T Consensus       160 sK--~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t  192 (248)
T 2pnf_A          160 TK--AGLIGFTKSLAKELAPRNVLVNAVAPGFIET  192 (248)
T ss_dssp             HH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HH--HHHHHHHHHHHHHhcccCeEEEEEEeceecC
Confidence            44  3333       33445799999999999864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.92  E-value=1.8e-25  Score=191.46  Aligned_cols=168  Identities=10%  Similarity=0.050  Sum_probs=123.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcC--CCCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++. +.+.+..  ...++.++++|++|++++++++      
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999987532 2222211  1457889999999999888654      


Q ss_pred             hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          149 FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++++|+||||||......    ...++.+..+++|+.|+.++++++.   ...++||++||..++..    ......|+.
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~a  198 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG----NETLIDYSA  198 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC----CTTCHHHHH
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC----CCCChhHHH
Confidence            568999999999764211    1122234566899999999999873   23469999999988743    233456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.     .+.+..++...||++++|+||+|.+
T Consensus       199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  231 (291)
T 3ijr_A          199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWT  231 (291)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcC
Confidence            543     1222344556799999999999854

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=5.5e-25  Score=193.31  Aligned_cols=165  Identities=18%  Similarity=0.110  Sum_probs=126.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHH--CCCeEEEEecChhhH-------hhhh--CcCCCCCeeEEEeeCCCccCcchh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLS--RNIKSRLLLRDPEKA-------TTLF--GKQDEETLQVCKGDTRNPKDLDPA  147 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~--~G~~V~~~~R~~~~~-------~~~~--~~~~~~~~~~v~~Dl~d~~~~~~~  147 (250)
                      ++++|+||||||+||||++++++|++  +|++|++++|+....       +.+.  ......++.++.+|++|.++++++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            56789999999999999999999999  999999999976411       1000  111244678999999999999864


Q ss_pred             hhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC------CcchhhHHH
Q 025619          148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL------PWSIMNLFG  220 (250)
Q Consensus       148 ~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~------~~~~~~~y~  220 (250)
                      ...++|+||||||....   ...+....+++|+.|+.+++++++ .+.+ ||++||.++|+....      +..+.+.|+
T Consensus        87 ~~~~~D~vih~A~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~  162 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDT---TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYG  162 (362)
T ss_dssp             TTSCCSEEEECCCCCGG---GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHH
T ss_pred             hccCCCEEEECCccCCc---cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhH
Confidence            36789999999996543   223445567899999999999985 4554 999999998874332      334455555


Q ss_pred             HHHHHHHHHHHHHhcC--CCEEEEecceEEe
Q 025619          221 VLKYKKMGEDFVQKSG--LPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~~~~~~g--i~~~~vrPg~v~~  249 (250)
                        .+|.++|.+++...  ++++++||+.+||
T Consensus       163 --~sK~~~E~~~~~~~~~~~~~~lR~~~v~G  191 (362)
T 3sxp_A          163 --FSKLCMDEFVLSHSNDNVQVGLRYFNVYG  191 (362)
T ss_dssp             --HHHHHHHHHHHHTTTTSCEEEEEECSEES
T ss_pred             --HHHHHHHHHHHHHhccCCEEEEEeCceeC
Confidence              67888888887654  8999999999986

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.92  E-value=8.4e-26  Score=188.01  Aligned_cols=162  Identities=14%  Similarity=0.163  Sum_probs=122.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh----
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----  148 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~----  148 (250)
                      +|+||||||+||||++++++|+++|+       +|++++|++++++.+.+++.  ..++.++.+|++|++++++++    
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       99999999887766543322  346788999999999888654    


Q ss_pred             --hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                        ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.++...
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~  157 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----AFRHSSI  157 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC----CCCCCch
Confidence              358999999999864221   111122345688999999999876     24678999999998874    3344456


Q ss_pred             HHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|  .+++       .+++..||++++|+||++++
T Consensus       158 Y~~sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  193 (244)
T 2bd0_A          158 YCMSK--FGQRGLVETMRLYARKCNVRITDVQPGAVYT  193 (244)
T ss_dssp             HHHHH--HHHHHHHHHHHHHHTTTTEEEEEEEECCBCS
T ss_pred             hHHHH--HHHHHHHHHHHHHhhccCcEEEEEECCCccc
Confidence            66554  3333       34456799999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.92  E-value=1.8e-25  Score=191.82  Aligned_cols=168  Identities=12%  Similarity=0.034  Sum_probs=123.6

Q ss_pred             CCCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +.+++|++|||||+|  |||++++++|+++|++|++++|+.+..+.+.+... ...+.++++|++|.+++++++      
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999997  99999999999999999999999754433322111 234678999999999988754      


Q ss_pred             hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|+||||||....     +  ....+.....+++|+.|+.++++++.   ...++||++||..++.    +......
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~----~~~~~~~  181 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK----VVPHYNV  181 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----CCTTTTH
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc----CCCCchh
Confidence            4789999999998642     1  11122234466889999999999873   2356999999998873    3344556


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       182 Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T  217 (296)
T 3k31_A          182 MGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRT  217 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcC
Confidence            665553     2233345566799999999999853

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.92  E-value=1.4e-25  Score=190.13  Aligned_cols=156  Identities=15%  Similarity=0.115  Sum_probs=117.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|+||||||+||||++++++|+++|++|++++|+.+...        ..+..+++|++|.+++++++      ++++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--------TSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--------CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            678999999999999999999999999999999999876542        25678899999999888654      5689


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.+.....+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+| 
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK-  157 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA----ATKNAAAYVTSK-  157 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----BCTTCHHHHHHH-
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----CCCCChhHHHHH-
Confidence            999999998653211   11112335579999999999876     24678999999999884    333445666544 


Q ss_pred             HHHHHH-------HHHhcCCCEEEEecceEEe
Q 025619          225 KKMGED-------FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~-------~~~~~gi~~~~vrPg~v~~  249 (250)
                       .+++.       ++.. ||++++|+||+|.+
T Consensus       158 -aa~~~l~~~la~e~~~-~i~vn~v~PG~v~T  187 (269)
T 3vtz_A          158 -HALLGLTRSVAIDYAP-KIRCNAVCPGTIMT  187 (269)
T ss_dssp             -HHHHHHHHHHHHHHTT-TEEEEEEEECSBCC
T ss_pred             -HHHHHHHHHHHHHhcC-CCEEEEEEECCCcC
Confidence             43332       3333 89999999999853

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=3.8e-25  Score=186.80  Aligned_cols=160  Identities=14%  Similarity=0.116  Sum_probs=118.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++|++|||||+||||++++++|+++|++|++++|+.++.+++.+++.    ..++.++.+|++|++++++++      +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999877655432221    245788999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHH----ccC-C---CCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA----LPS-S---LKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a----~~~-~---~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||...     .++.+..+++|+.|+.++.++    +++ +   .++||++||..++.+    .+....|+.
T Consensus        85 g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP----VAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC----CCCCchHHH
Confidence            68999999999753     123344668899986665554    432 2   579999999988742    233456665


Q ss_pred             HHHHH-----H--HHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYKK-----M--GEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~-----~--~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|...     .  .+.++...||++++|+||++.
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~  189 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN  189 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCc
Confidence            55311     1  134455689999999999875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.92  E-value=7.2e-25  Score=188.69  Aligned_cols=158  Identities=18%  Similarity=0.206  Sum_probs=117.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      ||+||||||+||||++++++|+++|+.|++..|+....+.+     ..+++++.+|++| +++.++ +.++|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~-~~~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDY-LKGAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHH-HTTCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHH-hcCCCEEEECCCC
Confidence            46899999999999999999999994444444443332221     3568899999999 888875 7899999999996


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHH-
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFV-  232 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~-  232 (250)
                      ... ....++....+++|+.|+.+++++++ .+.++||++||.++|+..       +.+..+.+.|+  .+|..+|.++ 
T Consensus        74 ~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~~~  150 (313)
T 3ehe_A           74 PDV-RIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG--ASKLACEALIE  150 (313)
T ss_dssp             CCC-C-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHHHHH
T ss_pred             CCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHH
Confidence            532 22233445566899999999999984 578899999999998632       23444556666  5566666554 


Q ss_pred             ---HhcCCCEEEEecceEEe
Q 025619          233 ---QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ---~~~gi~~~~vrPg~v~~  249 (250)
                         ++.|++++++||+.|||
T Consensus       151 ~~~~~~g~~~~ilRp~~v~G  170 (313)
T 3ehe_A          151 SYCHTFDMQAWIYRFANVIG  170 (313)
T ss_dssp             HHHHHTTCEEEEEECSCEES
T ss_pred             HHHHhcCCCEEEEeeccccC
Confidence               45699999999999997

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.92  E-value=4.4e-25  Score=182.45  Aligned_cols=162  Identities=12%  Similarity=0.115  Sum_probs=120.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~vi~~  158 (250)
                      ||++|||||+||||++++++|+++|++|++++|++++++++.+++ ..++.++.+|++|.+++++++   .+..|+||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence            478999999999999999999999999999999999888776655 457889999999999998753   1234999999


Q ss_pred             CcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----HH
Q 025619          159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KK  226 (250)
Q Consensus       159 Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~  226 (250)
                      ||......   .+.+..+..+++|+.|+.++++++    ++..++||++||..++.    +......|+.+|.     .+
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           80 AGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ----PKAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS----CCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC----CCCCCchhHHHHHHHHHHHH
Confidence            99765221   111122345688999999999876    23334999999998874    3344556665553     12


Q ss_pred             HHHHHHHhcCCCEEEEecceEE
Q 025619          227 MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+..++...||++++|+||++.
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~  177 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMA  177 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC-
T ss_pred             HHHHHHHhcCeEEEEEECCccc
Confidence            2234445579999999999875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=1.5e-25  Score=198.06  Aligned_cols=165  Identities=15%  Similarity=0.065  Sum_probs=122.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+++|+||||||+|+||++++++|+++| ++|++++|+.+...+...  ...+++++.+|++|.++++++ +.++|+|||
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--~~~~v~~~~~Dl~d~~~l~~~-~~~~d~Vih  105 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--DHPAVRFSETSITDDALLASL-QDEYDYVFH  105 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--CCTTEEEECSCTTCHHHHHHC-CSCCSEEEE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--CCCceEEEECCCCCHHHHHHH-hhCCCEEEE
Confidence            4577899999999999999999999999 999999998654322111  145788999999999998865 689999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccCccccc---------CCC---Cc-chhhHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF---------NEL---PW-SIMNLFGVL  222 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~~~~---------~~~---~~-~~~~~y~~~  222 (250)
                      +||..... ..+.+....+++|+.++.+++++++ . ++++||++||.++|+.         ++.   +. .+...|+  
T Consensus       106 ~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~--  182 (377)
T 2q1s_A          106 LATYHGNQ-SSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYS--  182 (377)
T ss_dssp             CCCCSCHH-HHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHH--
T ss_pred             CCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchH--
Confidence            99975421 1112334466899999999999985 4 7889999999998863         222   22 4445655  


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      .+|..+|.+++    +.|++++++|||.|||
T Consensus       183 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G  213 (377)
T 2q1s_A          183 MSKIFGEFYSVYYHKQHQLPTVRARFQNVYG  213 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeccEEC
Confidence            56666776554    3599999999999997

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.92  E-value=3.2e-25  Score=189.10  Aligned_cols=165  Identities=15%  Similarity=0.104  Sum_probs=119.9

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|++|||||+  ||||++++++|+++|++|++++|+.+   ..+++.+..  +++.++++|++|.+++++++     
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF--GSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999875   233332221  24678999999999888654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc----CCCCeEEEEccCcccccCCCCcchh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                       ++++|+||||||....     +  ....+..+..+++|+.|+.++++++.    +..++||++||..++.    +.+..
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  171 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK----VVPHY  171 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----BCTTT
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----CCCCc
Confidence             4689999999998642     1  11111223456889999999999772    2347999999988773    23334


Q ss_pred             hHHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|..     +.+..++...||++++|+||++.+
T Consensus       172 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  209 (285)
T 2p91_A          172 NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKT  209 (285)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccC
Confidence            566655431     122334456799999999999864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.92  E-value=7e-26  Score=198.43  Aligned_cols=166  Identities=15%  Similarity=0.104  Sum_probs=124.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhC--CCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi  156 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|++++.+.+.+.+. ..+++++.+|++|.+++.++ +.  ++|+||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vi   85 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLES-IREFQPEIVF   85 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHH-HHHHCCSEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHH-HHhcCCCEEE
Confidence            457899999999999999999999999999999998765443322211 34788999999999998875 44  499999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCC--------CCcchhhHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKK  226 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~--------~~~~~~~~y~~~k~k~  226 (250)
                      ||||..... ....+....+++|+.|+.+++++++ .+ +++||++||..+|+...        .+..+.+.|+  .+|.
T Consensus        86 h~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~--~sK~  162 (357)
T 1rkx_A           86 HMAAQPLVR-LSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS--NSKG  162 (357)
T ss_dssp             ECCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH--HHHH
T ss_pred             ECCCCcccc-cchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccH--HHHH
Confidence            999964211 1112234466899999999999885 34 78999999999886432        1334455666  5666


Q ss_pred             HHHHHHHh-------------cCCCEEEEecceEEe
Q 025619          227 MGEDFVQK-------------SGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~~~-------------~gi~~~~vrPg~v~~  249 (250)
                      .+|++++.             .|++++++|||.|||
T Consensus       163 ~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G  198 (357)
T 1rkx_A          163 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIG  198 (357)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred             HHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeC
Confidence            66655533             299999999999997

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.92  E-value=7.4e-26  Score=191.59  Aligned_cols=166  Identities=16%  Similarity=0.188  Sum_probs=118.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++ |+.+..+++.+++.  ..++.++++|++|++++++++      +
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999884 55555555443221  457888999999999988654      5


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|+||||||.......   ..+..+..+++|+.|+.++++++.   ...++||++||..+..    +.+....|+.+|
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK  179 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL----LHPSYGIYAAAK  179 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH----CCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc----CCCCchHHHHHH
Confidence            689999999998653211   111123345799999999998762   2246999999988764    233345666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++.
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~  209 (267)
T 3u5t_A          180 AGVEAMTHVLSKELRGRDITVNAVAPGPTA  209 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSCCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEEECCCc
Confidence            3     122234445679999999999874

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=1.9e-25  Score=192.67  Aligned_cols=159  Identities=14%  Similarity=0.124  Sum_probs=121.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~  158 (250)
                      ...|+||||||+|+||++++++|+++|++|++++|+++. +.    +   +++++.+|++|.+++++++-+ ++|+||||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   81 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---NVEMISLDIMDSQRVKKVISDIKPDYIFHL   81 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---TEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---eeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence            356899999999999999999999999999999998764 21    1   678899999999999876322 49999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC--CCCeEEEEccCcccccC---------CCCcchhhHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN---------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~iV~iSS~~~~~~~---------~~~~~~~~~y~~~k~k~~  227 (250)
                      ||..... ..+++....+++|+.|+.+++++++.  +.++||++||.++|+..         +.+..+.+.|+  .+|.+
T Consensus        82 A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~--~sK~~  158 (321)
T 2pk3_A           82 AAKSSVK-DSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYG--VSKAS  158 (321)
T ss_dssp             CSCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHH--HHHHH
T ss_pred             Ccccchh-hhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccH--HHHHH
Confidence            9976421 12223445678999999999999853  58999999999888642         12334455665  56667


Q ss_pred             HHHHHHh----cCCCEEEEecceEEe
Q 025619          228 GEDFVQK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~----~gi~~~~vrPg~v~~  249 (250)
                      +|.+++.    .|++++++|||.+||
T Consensus       159 ~E~~~~~~~~~~gi~~~ilrp~~v~g  184 (321)
T 2pk3_A          159 VGMLARQYVKAYGMDIIHTRTFNHIG  184 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCcccC
Confidence            7766544    499999999999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=1.1e-25  Score=190.55  Aligned_cols=167  Identities=17%  Similarity=0.071  Sum_probs=122.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++++|+||||||+||||++++++|+++|++|++++|+ .+..+.+.+.+.  ..++.++++|++|.+++++++      
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999995 444444332221  457889999999999888654      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   ...++....+++|+.|+.++++++     +.+.++||++||..+..    +..+...|+
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  180 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER----GNMGQTNYS  180 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC----CCCCchHhH
Confidence            468999999999865321   111122345688999999988876     23668999999988873    233445666


Q ss_pred             HHHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|..     +.+..++...||++++|+||++.
T Consensus       181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  213 (271)
T 4iin_A          181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIE  213 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCccc
Confidence            55431     12223445579999999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=3.9e-25  Score=189.81  Aligned_cols=166  Identities=14%  Similarity=0.161  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-------CCCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      .+++|+|+||||+||||++++++|+++|++|++++|+.++++++.+++       ...++.++.+|++|.+++++++   
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            578899999999999999999999999999999999988766544322       1457889999999999888654   


Q ss_pred             ---hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 ---FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                         ++++|+||||||......   ...+.....+++|+.|+.++++++.     .+.++||++||.. ..    +.+...
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~----~~~~~~  169 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA----GFPLAV  169 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT----CCTTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc----CCCcch
Confidence               457999999999654211   1111123456889999999998762     3457999999988 32    223345


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|.     .+.+..++...||++++|+||++++
T Consensus       170 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  206 (303)
T 1yxm_A          170 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYS  206 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCccc
Confidence            5665443     1122234455699999999999875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=3.1e-25  Score=192.49  Aligned_cols=165  Identities=16%  Similarity=0.105  Sum_probs=122.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChh--hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++|+||||||+||||++++++|+++|  ++|++++|+..  ..+.+.+.....+++++.+|++|.++++++ ++++|+||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi   80 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL-VRKVDGVV   80 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHTCSEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHH-hhCCCEEE
Confidence            34689999999999999999999997  89999998642  222222211145788999999999999875 58999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~  227 (250)
                      ||||..... ....+....+++|+.|+.++++++. .+ .++||++||.++|+..       +.+..+.+.|+  .+|.+
T Consensus        81 h~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~--~sK~~  157 (336)
T 2hun_A           81 HLAAESHVD-RSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYS--ATKAA  157 (336)
T ss_dssp             ECCCCCCHH-HHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHH--HHHHH
T ss_pred             ECCCCcChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccH--HHHHH
Confidence            999975421 1112334567899999999999884 34 3799999999888632       12334455666  56666


Q ss_pred             HHHHHH----hcCCCEEEEecceEEe
Q 025619          228 GEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +|.+++    +.|++++++|||.|||
T Consensus       158 ~e~~~~~~~~~~~~~~~ilrp~~v~g  183 (336)
T 2hun_A          158 SDMLVLGWTRTYNLNASITRCTNNYG  183 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECEEES
T ss_pred             HHHHHHHHHHHhCCCEEEEeeeeeeC
Confidence            665553    4699999999999987

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.92  E-value=1.1e-24  Score=187.85  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=113.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-Chhh---HhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEK---ATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~---~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      +|+||||||+||||++++++|+++|++|++++| +++.   ...+.+ +.  ..+++++.+|++|.++++++ +.++|+|
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~v   78 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTN-LPGASEKLHFFNADLSNPDSFAAA-IEGCVGI   78 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHT-STTHHHHEEECCCCTTCGGGGHHH-HTTCSEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHh-hhccCCceEEEecCCCCHHHHHHH-HcCCCEE
Confidence            578999999999999999999999999999998 6533   111111 11  12467889999999999875 7899999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccCcccccCC---CCcc--------------hh
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKFNE---LPWS--------------IM  216 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~~~~~~~~---~~~~--------------~~  216 (250)
                      ||+|+....  ...++....+++|+.|+.++++++. . ++++||++||.+++....   .+..              +.
T Consensus        79 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           79 FHTASPIDF--AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             EECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEcCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence            999975321  1111123367899999999999884 4 678999999987543110   0110              01


Q ss_pred             h-HHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          217 N-LFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~-~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      . .|+  .+|..+|..+    ++.|++++++|||+|||
T Consensus       157 ~~~Y~--~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g  192 (322)
T 2p4h_X          157 GWNYA--VSKTLAEKAVLEFGEQNGIDVVTLILPFIVG  192 (322)
T ss_dssp             THHHH--HHHHHHHHHHHHHHHHTTCCEEEEEECEEES
T ss_pred             cccHH--HHHHHHHHHHHHHHHhcCCcEEEEcCCceEC
Confidence            1 355  4555555443    34799999999999987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=2.4e-25  Score=189.66  Aligned_cols=168  Identities=13%  Similarity=0.091  Sum_probs=121.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++ .+++.+++  ...++.++.+|++|.+++++++      +
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999999998654 33322211  1346888999999999887643      5


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|+||||||......   ...++.+..+++|+.|+.++++++.   .+.++||++||..++....   .....|+.+|
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~Y~asK  182 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV---PKHAVYSGSK  182 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC---SSCHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC---CCCcchHHHH
Confidence            68999999999864221   1112223456899999999999773   2568999999988764211   1245666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...||++++|+||++.+
T Consensus       183 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  213 (283)
T 1g0o_A          183 GAIETFARCMAIDMADKKITVNVVAPGGIKT  213 (283)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccc
Confidence            3     1222344456799999999998853

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.92  E-value=1.8e-25  Score=186.89  Aligned_cols=157  Identities=15%  Similarity=0.130  Sum_probs=114.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++         ..+++|++|++++++++      ++++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL---------FGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS---------EEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh---------cCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            57889999999999999999999999999999999987654432         23789999999887654      4689


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----GIGNQANYAASKA  158 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------CCHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc----CCCCChhHHHHHH
Confidence            99999999864211   111122345688999999998876     24678999999998763    2233456665543


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++...||++++|+||++.
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~  187 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYID  187 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCc
Confidence                 222334455679999999999885

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=2.8e-25  Score=188.30  Aligned_cols=164  Identities=14%  Similarity=0.080  Sum_probs=121.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.+++.+++.  ..++.++.+|++|.+++++++      ++
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG  107 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            5788999999999999999999999999999999999887766543321  347889999999999887653      45


Q ss_pred             CCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||.......   ..+.....+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+
T Consensus       108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~~Y~~s  183 (272)
T 1yb1_A          108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----SVPFLLAYCSS  183 (272)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----CHHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----CCCCchhHHHH
Confidence            89999999998642211   11112345688999988887765     24678999999998873    34445566654


Q ss_pred             HHHHHHHH-------HHH---hcCCCEEEEecceEE
Q 025619          223 KYKKMGED-------FVQ---KSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~~~e~-------~~~---~~gi~~~~vrPg~v~  248 (250)
                      |  .+++.       ++.   ..||++++|+||++.
T Consensus       184 K--~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~  217 (272)
T 1yb1_A          184 K--FAAVGFHKTLTDELAALQITGVKTTCLCPNFVN  217 (272)
T ss_dssp             H--HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred             H--HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCccc
Confidence            4  43332       222   358999999999863

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.92  E-value=2.6e-25  Score=189.18  Aligned_cols=166  Identities=14%  Similarity=0.143  Sum_probs=125.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCC
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGV  152 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~  152 (250)
                      +++++|++|||||+||||++++++|+++|++|++++|+.++++++.+++ ..++.++++|++|.+++++++     ++++
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i  104 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGRL  104 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678899999999999999999999999999999999999887776555 457899999999999888654     3579


Q ss_pred             cEEEEc-CcCCCcCCC--------CCCCCCCcceehHHHHHHHHHHc-----c------CCCCeEEEEccCcccccCCCC
Q 025619          153 THVICC-TGTTAFPSR--------RWDGDNTPEKVDWEGVRNLVSAL-----P------SSLKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       153 D~vi~~-Ag~~~~~~~--------~~~~~~~~~~~N~~g~~~l~~a~-----~------~~~~~iV~iSS~~~~~~~~~~  212 (250)
                      |+|||| ||.......        +++.....+++|+.|+.++++++     +      .+.++||++||..++.    +
T Consensus       105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~  180 (281)
T 3ppi_A          105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE----G  180 (281)
T ss_dssp             EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS----C
T ss_pred             CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC----C
Confidence            999999 544332111        00112345588999999998865     1      2456999999999884    3


Q ss_pred             cchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ......|+.+|.     .+.+..++...||++++|+||+|.
T Consensus       181 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  221 (281)
T 3ppi_A          181 QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMK  221 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCC
Confidence            444566765554     222334556679999999999985

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.92  E-value=2.1e-25  Score=195.18  Aligned_cols=166  Identities=17%  Similarity=0.156  Sum_probs=125.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh----hHhhhhCcCC---CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~----~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|+..    +++.+.+.+.   ..+++++.+|++|.++++++ +.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~  103 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA-CAGV  103 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH-HTTC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHH-hcCC
Confidence            45789999999999999999999999999999999753    3333322221   24788999999999999875 6899


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------CCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~  224 (250)
                      |+|||+||..... ..+.+....+++|+.|+.+++++++ .++++||++||.++++...       .+..+.+.|+  .+
T Consensus       104 d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~--~s  180 (352)
T 1sb8_A          104 DYVLHQAALGSVP-RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYA--VT  180 (352)
T ss_dssp             SEEEECCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHH--HH
T ss_pred             CEEEECCcccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhH--HH
Confidence            9999999975421 1112334456899999999999884 5789999999999986432       2223445665  56


Q ss_pred             HHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          225 KKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      |..+|.+++    +.|++++++|||.|||
T Consensus       181 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G  209 (352)
T 1sb8_A          181 KYVNELYADVFSRCYGFSTIGLRYFNVFG  209 (352)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEECceeC
Confidence            666666553    4599999999999997

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.92  E-value=6.4e-25  Score=182.57  Aligned_cols=159  Identities=14%  Similarity=0.184  Sum_probs=117.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~v  155 (250)
                      +|+++||||+||||++++++|+++|++|++++|++++..+   ++   ++..+++|++| +++++++      ++++|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999999876322   12   27789999999 8877543      5689999


Q ss_pred             EEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          156 ICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       156 i~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      |||||.......   +.++.+..+++|+.|+.++++++     +.+.++||++||..++....  ..+...|+.+|.   
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~~Y~~sK~a~~  152 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--PVPIPAYTTAKTALL  152 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--TSCCHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--CCCCccHHHHHHHHH
Confidence            999997642211   11122345588999999988876     24678999999998875321  133456665543   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                        .+.+..++...||++++|+||++.+
T Consensus       153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t  179 (239)
T 2ekp_A          153 GLTRALAKEWARLGIRVNLLCPGYVET  179 (239)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHhhhcCcEEEEEEeCCccC
Confidence              1223344556799999999999853

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.92  E-value=3.2e-25  Score=193.05  Aligned_cols=166  Identities=10%  Similarity=0.070  Sum_probs=122.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC---CCCeeEEEeeCCCcc-------------
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD---EETLQVCKGDTRNPK-------------  142 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~-------------  142 (250)
                      +++|++|||||+||||++++++|+++|++|++++ |++++++++.+++.   ..++.++++|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            6789999999999999999999999999999999 99887766544331   356889999999998             


Q ss_pred             ----Ccchhh------hCCCcEEEEcCcCCCcCCC-CC----------------CCCCCcceehHHHHHHHHHHc-----
Q 025619          143 ----DLDPAI------FEGVTHVICCTGTTAFPSR-RW----------------DGDNTPEKVDWEGVRNLVSAL-----  190 (250)
Q Consensus       143 ----~~~~~~------~~~~D~vi~~Ag~~~~~~~-~~----------------~~~~~~~~~N~~g~~~l~~a~-----  190 (250)
                          ++++++      ++++|+||||||....... +.                +..+..+++|+.|+.++++++     
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                776543      4689999999998643211 11                111234588999999998876     


Q ss_pred             cCC------CCeEEEEccCcccccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          191 PSS------LKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       191 ~~~------~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+      .++||++||..++.    +......|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T  269 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  269 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred             hcCCcCCCCCcEEEEECchhhcc----CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccC
Confidence            234      67999999998874    3344456665553     2223344556799999999999853

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.92  E-value=3.2e-25  Score=190.09  Aligned_cols=167  Identities=10%  Similarity=0.026  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCCh--HHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~--IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|++|||||+|+  ||++++++|+++|++|++++|+++..+.+.+... ..++.++.+|++|.+++++++      +
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999965  9999999999999999999999653332221110 236788999999999988654      4


Q ss_pred             CCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|+||||||....     +  ...++.....+++|+.|+.++++++.   ...++||++||..++.    +......|
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~----~~~~~~~Y  183 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK----VMPNYNVM  183 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS----BCTTTTHH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc----CCCchHHH
Confidence            689999999998641     1  11122233456889999999998772   2357999999998874    33445566


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|.     .+.+..++...||++++|+||+|.+
T Consensus       184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  218 (293)
T 3grk_A          184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKT  218 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcc
Confidence            65554     2233345566799999999999853

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.92  E-value=1.2e-24  Score=181.42  Aligned_cols=167  Identities=14%  Similarity=0.090  Sum_probs=122.9

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeC--CCccCcchhh----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDT--RNPKDLDPAI----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl--~d~~~~~~~~----  148 (250)
                      ..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++.   ..+..++.+|+  +|.+++++++    
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988776544321   34677888888  8888777543    


Q ss_pred             --hCCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc----c-CCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 --FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~----~-~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                        ++++|+||||||......    ...+.....+++|+.|+.++++++    + .+.++||++||..++.    +.....
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~  165 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK----GRANWG  165 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS----CCTTCH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC----CCCCcc
Confidence              568999999999853211    111122345688999999999876    3 4567999999988874    334445


Q ss_pred             HHHHHHHH-----HHHHHHHHh-cCCCEEEEecceEE
Q 025619          218 LFGVLKYK-----KMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~k-----~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                      .|+.+|..     +.+..++.. .||++++|+||++.
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~  202 (247)
T 3i1j_A          166 AYGVSKFATEGLMQTLADELEGVTAVRANSINPGATR  202 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCS
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Confidence            66655531     122233434 68999999999874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1.1e-24  Score=180.82  Aligned_cols=151  Identities=23%  Similarity=0.291  Sum_probs=111.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+++|+||||||+|+||++++++|+++| ++|++++|++++++++.    ..+++++.+|++|+++++++ +.++|+|||
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~-~~~~D~vv~   94 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY----PTNSQIIMGDVLNHAALKQA-MQGQDIVYA   94 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC----CTTEEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc----cCCcEEEEecCCCHHHHHHH-hcCCCEEEE
Confidence            4567899999999999999999999999 89999999988765432    45789999999999999975 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCc---chhhHHHHHHHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW---SIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~---~~~~~y~~~k~k~~~e~~~~  233 (250)
                      |||...               ....+.+++++++ .+.++||++||.++++.....+   .......+...+..++++++
T Consensus        95 ~a~~~~---------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  159 (236)
T 3qvo_A           95 NLTGED---------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIE  159 (236)
T ss_dssp             ECCSTT---------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHH
T ss_pred             cCCCCc---------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHH
Confidence            998521               1245778888884 6789999999999886432111   10000011123445677788


Q ss_pred             hcCCCEEEEecceEEe
Q 025619          234 KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~~gi~~~~vrPg~v~~  249 (250)
                      +.|+++++||||++++
T Consensus       160 ~~gi~~~~vrPg~i~~  175 (236)
T 3qvo_A          160 ASGLEYTILRPAWLTD  175 (236)
T ss_dssp             TSCSEEEEEEECEEEC
T ss_pred             HCCCCEEEEeCCcccC
Confidence            8999999999999874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.91  E-value=2.6e-25  Score=189.68  Aligned_cols=166  Identities=13%  Similarity=0.092  Sum_probs=123.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ..+++|+|+||||+||||++++++|+++|++|++++|++++++++.+++.  ..++.++.+|++|.+++++++      +
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            35678999999999999999999999999999999999877665543321  346888999999999988654      3


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..+..+..+++|+.|+.++++++     +.+.++||++||..++.+    ......|+.
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----~~~~~~Y~a  195 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG----NVGQANYSS  195 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----CTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC----CCCCchHHH
Confidence            689999999998642211   11112345688999988888766     246789999999987642    223455665


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|  .+++       .++...||++++|+||++.+
T Consensus       196 sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  228 (285)
T 2c07_A          196 SK--AGVIGFTKSLAKELASRNITVNAIAPGFISS  228 (285)
T ss_dssp             HH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HH--HHHHHHHHHHHHHHHHhCcEEEEEEeCcEec
Confidence            44  3333       34455799999999998853

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=2.6e-25  Score=193.56  Aligned_cols=161  Identities=18%  Similarity=0.188  Sum_probs=119.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hh----HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC--CcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~----~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--~D~  154 (250)
                      ||+||||||+|+||++++++|+++|++|++++|+. ..    .+.+..   ..+++++.+|++|.++++++ +.+  +|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~   76 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRL-ITKYMPDS   76 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHH-HHHHCCSE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHH-HhccCCCE
Confidence            36899999999999999999999999999999853 11    122221   24688999999999999875 555  999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEccCcccccCC----------------------
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVSSVGVTKFNE----------------------  210 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iSS~~~~~~~~----------------------  210 (250)
                      ||||||..... ..+.+....+++|+.|+.+++++++ .+.+ +||++||.++|+...                      
T Consensus        77 vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           77 CFHLAGQVAMT-TSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             EEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             EEECCcccChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            99999975421 1112334466899999999999884 4554 999999999886321                      


Q ss_pred             -CCcchhhHHHHHHHHHHHHHHHHh----cCCCEEEEecceEEe
Q 025619          211 -LPWSIMNLFGVLKYKKMGEDFVQK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       211 -~~~~~~~~y~~~k~k~~~e~~~~~----~gi~~~~vrPg~v~~  249 (250)
                       .+..+...|+  .+|..+|.+++.    .|++++++|||+|||
T Consensus       156 ~~~~~~~~~Y~--~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g  197 (347)
T 1orr_A          156 STQLDFHSPYG--CSKGAADQYMLDYARIFGLNTVVFRHSSMYG  197 (347)
T ss_dssp             TSCCCCCHHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             cCCCCCCCchH--HHHHHHHHHHHHHHHHhCCcEEEEccCceeC
Confidence             1233445665  566666665543    599999999999987

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.91  E-value=3.7e-25  Score=191.57  Aligned_cols=160  Identities=16%  Similarity=0.175  Sum_probs=122.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~A  159 (250)
                      ||+||||||+|+||++++++|+++|++|++++|+.....+   .+ ..+++++.+|++|.++++++ +.  ++|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI-TEGAKFYNGDLRDKAFLRDV-FTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS-CTTSEEEECCTTCHHHHHHH-HHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc-CCCcEEEECCCCCHHHHHHH-HhhcCCCEEEECC
Confidence            4689999999999999999999999999999997644321   11 23688999999999998875 55  899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      |...... .+.+....+++|+.|+.+++++++ .++++||++||.++++..       +.+..+.+.|+  .+|..+|++
T Consensus        76 ~~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~  152 (330)
T 2c20_A           76 ADSLVGV-SMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG--ETKLAIEKM  152 (330)
T ss_dssp             CCCCHHH-HHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH--HHHHHHHHH
T ss_pred             cccCccc-cccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH--HHHHHHHHH
Confidence            9754210 112334466889999999999884 578899999999988632       22333445665  566666665


Q ss_pred             HH----hcCCCEEEEecceEEe
Q 025619          232 VQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~----~~gi~~~~vrPg~v~~  249 (250)
                      ++    +.|++++++||+.+||
T Consensus       153 ~~~~~~~~~~~~~ilrp~~v~G  174 (330)
T 2c20_A          153 LHWYSQASNLRYKIFRYFNVAG  174 (330)
T ss_dssp             HHHHHHTSSCEEEEEECSEEEC
T ss_pred             HHHHHHHhCCcEEEEecCcccC
Confidence            54    3599999999999987

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-24  Score=181.20  Aligned_cols=166  Identities=17%  Similarity=0.100  Sum_probs=121.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC-
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE-  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~-  150 (250)
                      |++|+|+||||+||||++++++|+++|  ++|++++|+.++.+++.+. ...++.++.+|++|.+++++++      ++ 
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            357899999999999999999999999  9999999998877666543 3457899999999999887653      23 


Q ss_pred             -CCcEEEEcCcCCC-cCCC---CCCCCCCcceehHHHHHHHHHHcc-----C------C-----CCeEEEEccCcccccC
Q 025619          151 -GVTHVICCTGTTA-FPSR---RWDGDNTPEKVDWEGVRNLVSALP-----S------S-----LKRIVLVSSVGVTKFN  209 (250)
Q Consensus       151 -~~D~vi~~Ag~~~-~~~~---~~~~~~~~~~~N~~g~~~l~~a~~-----~------~-----~~~iV~iSS~~~~~~~  209 (250)
                       ++|+||||||... ....   ..+..+..+++|+.|+.++++++.     .      +     .++||++||..++...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             8999999999865 2111   111123455889999999988762     2      4     6899999999886432


Q ss_pred             CC---CcchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          210 EL---PWSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 ~~---~~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..   +..+...|+.+  |.+++       .++...|+++++|+||++.
T Consensus       160 ~~~~~~~~~~~~Y~~s--K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  206 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMS--KAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             CCSTTSSSCBHHHHHH--HHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             cccccccCCccHHHHH--HHHHHHHHHHHHHHhccCCeEEEEEcCCcee
Confidence            10   01234556644  44443       2334569999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.91  E-value=1.9e-25  Score=188.97  Aligned_cols=158  Identities=18%  Similarity=0.095  Sum_probs=118.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+..+.         ...+.+|++|.+++++++      ++++
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---------~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA---------DLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC---------SEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh---------hhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999999999999999999999999999999998765432         134578999998877543      5789


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.+..+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~asKa  171 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR----PGPGHALYCLTKA  171 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB----CCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----CCCCChHHHHHHH
Confidence            99999999875321   111122345579999999999976     24678999999998873    3344566665554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                           .+.+..++...||++++|+||++.+
T Consensus       172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T  201 (266)
T 3uxy_A          172 ALASLTQCMGMDHAPQGIRINAVCPNEVNT  201 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeCCCcc
Confidence                 1222344556799999999999853

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.91  E-value=1.5e-24  Score=182.89  Aligned_cols=167  Identities=15%  Similarity=0.117  Sum_probs=122.5

Q ss_pred             CCCCCEEEEEcCCCh--HHHHHHHHHHHCCCeEEEEecChhhHhh---hhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~--IG~~la~~L~~~G~~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+|+  ||++++++|+++|++|++++|+.+..+.   +.+.....++.++.+|++|.+++++++     
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            568899999999955  9999999999999999999998654333   333333347899999999999988754     


Q ss_pred             -hCCCcEEEEcCcCCCc----CC---CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF----PS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~----~~---~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||....    ..   ...+.....+++|+.|+.++++++.+   ..++||++||..++.    +.+...
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  159 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL----VMPNYN  159 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----CCTTTH
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc----cCCCcc
Confidence             4689999999998641    10   11112234558899999999997732   346999999998873    344456


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T  196 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT  196 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCS
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccc
Confidence            6765554     2223345566799999999998753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.91  E-value=6.9e-25  Score=181.67  Aligned_cols=162  Identities=14%  Similarity=0.111  Sum_probs=120.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +||++|||||+||||++++++|+++|++|++++|+.++++++.+++.   ..++.++++|++|++++++++      +++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999999999988776544321   457889999999999887653      468


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +|+||||||.......   +.++....+++|+.|+.++++++    +++.+++|++||..+...    .+....|+.  +
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----~~~~~~Y~~--s  154 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----IPYGGGYVS--T  154 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----CTTCHHHHH--H
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----CCCcchHHH--H
Confidence            9999999998653211   11222345688999999999876    234578888888776632    233345654  4


Q ss_pred             HHHHHHHH-----HhcCCCEEEEecceEE
Q 025619          225 KKMGEDFV-----QKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~-----~~~gi~~~~vrPg~v~  248 (250)
                      |.+++.+.     +..||++++|+||++.
T Consensus       155 Kaa~~~~~~~l~~~~~~i~v~~v~PG~v~  183 (235)
T 3l77_A          155 KWAARALVRTFQIENPDVRFFELRPGAVD  183 (235)
T ss_dssp             HHHHHHHHHHHHHHCTTSEEEEEEECSBS
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEEeCCccc
Confidence            44444332     3469999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=1.8e-25  Score=187.52  Aligned_cols=166  Identities=14%  Similarity=0.121  Sum_probs=119.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ...+|+||||||+||||++++++|+++|++|++++ |+.++.++..++.  ...++.++.+|++|.+++++++      +
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999988 5554443332221  1457889999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...++.+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  165 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----GQFGQTNYST  165 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG----SCSCCHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc----CCCCCcccHH
Confidence            68999999999865321   111122345688999988888765     34668999999998874    3344566665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++++||++.
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  197 (256)
T 3ezl_A          166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIG  197 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEEEEEECccc
Confidence            554     122334455679999999999885

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=3.8e-25  Score=185.98  Aligned_cols=169  Identities=16%  Similarity=0.154  Sum_probs=120.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++.   ..++.++.+|++|.+++++++      +
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999999999997654433222111   346889999999999887653      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CC-CCeEEEEccCcccccC---CCCcchhh
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN---ELPWSIMN  217 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~-~~~iV~iSS~~~~~~~---~~~~~~~~  217 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++.     .+ .++||++||..++...   ..+..+..
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence            57999999999864321   1111223356889999999998762     23 4899999998876422   11122245


Q ss_pred             HHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+  |.+++       .++...||++++|+||++.+
T Consensus       171 ~Y~~s--K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  207 (265)
T 1h5q_A          171 FYNSS--KAACSNLVKGLAAEWASAGIRVNALSPGYVNT  207 (265)
T ss_dssp             HHHHH--HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             ccHHH--HHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence            66644  44443       33445699999999999864

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.91  E-value=5e-25  Score=187.00  Aligned_cols=165  Identities=12%  Similarity=0.083  Sum_probs=120.3

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      ++++|++|||||+  ||||++++++|+++|++|++++|+.+   ..+++.+..  .++.++++|++|++++++++     
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999875   333332222  24788999999999887654     


Q ss_pred             -hCCCcEEEEcCcCCCc-----C--CCCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhh
Q 025619          149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~-----~--~~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                       ++++|+||||||....     +  ....+..+..+++|+.|+.++++++.+   ..++||++||..+..    +.+...
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  156 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK----YMAHYN  156 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTCH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC----CCCCch
Confidence             4689999999998642     1  111122234568899999999998732   137999999988763    233445


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  193 (275)
T 2pd4_A          157 VMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRT  193 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccc
Confidence            6665543     1222344556799999999999853

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.91  E-value=3.3e-25  Score=186.11  Aligned_cols=161  Identities=17%  Similarity=0.181  Sum_probs=120.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      |+|++|||||+||||++++++|+++|  +.|++++|+.++++++.+++ ..++.++++|++|.+++++++      ++++
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            46899999999999999999999985  78999999998887765544 356889999999999888654      5689


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......    +.++.+..+++|+.|+.++++++    ++..++||++||..++.    +.+....|+.+| 
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~----~~~~~~~Y~asK-  154 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM----YFSSWGAYGSSK-  154 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC----SSCCSHHHHHHH-
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc----CCCCcchHHHHH-
Confidence            999999998542111    11122345688999999999876    33238999999998874    344455666544 


Q ss_pred             HHHHHHHHH----h-cCCCEEEEecceEE
Q 025619          225 KKMGEDFVQ----K-SGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~~----~-~gi~~~~vrPg~v~  248 (250)
                       .+++.+.+    + .||++++|+||++.
T Consensus       155 -~a~~~~~~~la~e~~~i~vn~v~PG~v~  182 (254)
T 3kzv_A          155 -AALNHFAMTLANEERQVKAIAVAPGIVD  182 (254)
T ss_dssp             -HHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred             -HHHHHHHHHHHhhccCcEEEEEeCCccc
Confidence             44433221    2 58999999999875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=1.3e-24  Score=188.79  Aligned_cols=163  Identities=20%  Similarity=0.243  Sum_probs=122.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC---C---CeEEEEecChh--hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR---N---IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~---G---~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+||||||+|+||++++++|+++   |   ++|++++|+..  ..+.+.+.....+++++.+|++|.++++++ ++++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE-LRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH-TTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHH-hcCCCE
Confidence            37999999999999999999997   8   99999998642  112221111135788999999999999875 689999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~  226 (250)
                      |||+||..... ....+....+++|+.|+.++++++. .++++||++||.++|+..       +.+..+.+.|+  .+|.
T Consensus        80 Vih~A~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~--~sK~  156 (337)
T 1r6d_A           80 IVHFAAESHVD-RSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYA--ASKA  156 (337)
T ss_dssp             EEECCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHH--HHHH
T ss_pred             EEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchH--HHHH
Confidence            99999975421 1112334567899999999999884 578899999999888632       22344455666  5566


Q ss_pred             HHHHHH----HhcCCCEEEEecceEEe
Q 025619          227 MGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .+|.++    ++.|++++++||+.+||
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G  183 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYG  183 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeEC
Confidence            666554    34699999999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.91  E-value=1.3e-24  Score=184.94  Aligned_cols=165  Identities=11%  Similarity=0.131  Sum_probs=124.1

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|++|||||+  +|||++++++|+++|++|++++|+.  +.++++.+..  .++.++.+|++|.+++++++      
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            5688999999999  6699999999999999999999987  5555554432  35889999999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcC---C-----CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 FEGVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~---~-----~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                      ++++|+||||||.....   .     ...+.....+++|+.|+.++++++    ++..++||++||..++.    +.+..
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  176 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----AMPSY  176 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS----CCTTT
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc----CCCCc
Confidence            46899999999986421   0     111222345688999999999876    33468999999998873    34455


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T  214 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKT  214 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccc
Confidence            66765554     1223345566899999999999853

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.91  E-value=1.1e-24  Score=190.82  Aligned_cols=166  Identities=12%  Similarity=0.096  Sum_probs=120.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh-------hhhCcC--CCCCeeEEEeeCCCccCcchhh
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-------TLFGKQ--DEETLQVCKGDTRNPKDLDPAI  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~-------~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|+.++.+       +..+++  ...++.++.+|++|++++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4678999999999999999999999999999999999876422       221111  1356888999999999988754


Q ss_pred             ------hCCCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcc
Q 025619          149 ------FEGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       149 ------~~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                            ++++|+||||||........   .+..+..+++|+.|+.++++++     +.+.++||++||..++...  +..
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--~~~  198 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--WFK  198 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG--GTS
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC--CCC
Confidence                  56999999999986532211   1112345689999999999976     2456899999999887431  123


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecce
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~  246 (250)
                      ....|+.+|.     .+.+..++. .||++++|+||+
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~  234 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKT  234 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSB
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCC
Confidence            3456665543     122223444 799999999996

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.91  E-value=3e-25  Score=187.49  Aligned_cols=167  Identities=16%  Similarity=0.113  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|+++ .|+.++.++..+++  ...++.++.+|++|.+++++++      +
T Consensus        23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            5688999999999999999999999999999765 56666655543322  1457889999999999888654      4


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc------cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~------~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||......   ...++.+..+++|+.|+.++++++      +.+.++||++||..++.    +......|+
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~  178 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM----GNRGQVNYS  178 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH----CCTTCHHHH
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc----CCCCCchhH
Confidence            68999999999865321   111222445688999999998875      35678999999988874    233445666


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+|.     .+.+..++...||++++|+||++.+
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  212 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDT  212 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecC
Confidence            5553     2223345566799999999999853

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.91  E-value=1.2e-24  Score=189.02  Aligned_cols=164  Identities=21%  Similarity=0.306  Sum_probs=113.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh---hCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++|+||||||+||||++++++|+++|++|+++.|++++.+..   .......+++++.+|++|.++++++ +.++|+|||
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~Vih   86 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAP-IAGCDFVFH   86 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHH-HTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHH-HcCCCEEEE
Confidence            368999999999999999999999999999999986543211   0000124688899999999999875 689999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccc-c--CC--CCcc-----------hhh--
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTK-F--NE--LPWS-----------IMN--  217 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~-~--~~--~~~~-----------~~~--  217 (250)
                      +|+.....  ..+...+.+++|+.|+.+++++++ .+ +++||++||.+++. .  ..  .+..           +..  
T Consensus        87 ~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  164 (338)
T 2rh8_A           87 VATPVHFA--SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP  164 (338)
T ss_dssp             ESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CC
T ss_pred             eCCccCCC--CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCc
Confidence            99865321  111223467899999999999884 44 89999999987421 0  00  0110           111  


Q ss_pred             --HHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          218 --LFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 --~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                        .|+.  +|..+|.++    ++.|++++++||+.|||
T Consensus       165 ~~~Y~~--sK~~~E~~~~~~~~~~gi~~~~lrp~~v~G  200 (338)
T 2rh8_A          165 TWGYPA--SKTLAEKAAWKFAEENNIDLITVIPTLMAG  200 (338)
T ss_dssp             CCCCTT--SCCHHHHHHHHHHHHHTCCEEEEEECEEES
T ss_pred             cchHHH--HHHHHHHHHHHHHHHcCCcEEEEeCCceEC
Confidence              3654  444455433    44699999999999987

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.91  E-value=2.5e-25  Score=184.99  Aligned_cols=164  Identities=16%  Similarity=0.116  Sum_probs=119.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +|+||||||+||||++++++|+++|++|+++ +|++++.+.+.+++.  ..++.++++|++|++++++++      ++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999999995 888877665443221  346788999999999888654      3589


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   ...+..+..+++|+.|+.++++++.     .+.++||++||..++.+    .+....|+.+|.
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK~  156 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----NIGQANYAAAKA  156 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----CTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC----CCCCccchhhHH
Confidence            99999999865211   1111223456889999999988762     36789999999877632    223456665543


Q ss_pred             H-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 K-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     +.+..++...|+++++++||++.+
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  186 (244)
T 1edo_A          157 GVIGFSKTAAREGASRNINVNVVCPGFIAS  186 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEeeCcccc
Confidence            1     122234455799999999999853

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.91  E-value=2.9e-25  Score=187.86  Aligned_cols=166  Identities=16%  Similarity=0.168  Sum_probs=120.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+||||++++++|+++|++|++++ |+.+..++..+..  ...++.++.+|++|.+++++++      +
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999998 5555444432221  1457889999999999988654      4


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||.......   ..++.+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  177 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR----GAFGQANYAS  177 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTBHHHHH
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc----CCCCcchHHH
Confidence            689999999998653211   11122345688999999998876     24668999999988874    2334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       178 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  209 (269)
T 3gk3_A          178 AKAGIHGFTKTLALETAKRGITVNTVSPGYLA  209 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence            554     222334455679999999999885

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.91  E-value=7e-25  Score=191.16  Aligned_cols=162  Identities=15%  Similarity=0.141  Sum_probs=121.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhh--HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~--~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ||+||||||+|+||++++++|+++  |++|++++|+...  .+.+ +.+...+++++.+|++|.++++++ +.++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKL-AAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHH-hhcCCEEEE
Confidence            479999999999999999999999  8999999997531  1111 122235789999999999999875 788999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------------------CCcchhh
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------------------LPWSIMN  217 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------------------~~~~~~~  217 (250)
                      +||..... ..+.+....+++|+.|+.++++++. .+. +||++||.++|+...                   .+..+.+
T Consensus        82 ~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (348)
T 1oc2_A           82 YAAESHND-NSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS  159 (348)
T ss_dssp             CCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCS
T ss_pred             CCcccCcc-chhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCC
Confidence            99976421 1112334566899999999999885 465 999999998876321                   1333445


Q ss_pred             HHHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      .|+  .+|..+|.+++    +.|++++++|||.+||
T Consensus       160 ~Y~--~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G  193 (348)
T 1oc2_A          160 PYS--STKAASDLIVKAWVRSFGVKATISNCSNNYG  193 (348)
T ss_dssp             HHH--HHHHHHHHHHHHHHHHHCCEEEEEEECCEES
T ss_pred             ccH--HHHHHHHHHHHHHHHHhCCCEEEEeeceeeC
Confidence            666  56666665553    4599999999999987

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.91  E-value=1.6e-24  Score=186.51  Aligned_cols=153  Identities=17%  Similarity=0.154  Sum_probs=97.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~A  159 (250)
                      |+|+||||||+|+||++++++|+++|++|++++|+.++          .+  ++.+|++|.+++.+++-+ ++|+|||||
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            35799999999999999999999999999999987543          12  678999999999876322 599999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC------CCCcchhhHHHHHHHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN------ELPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~------~~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      |.... .....+....+++|+.|+.++++++. .+. +||++||..+++..      +.+..+.+.|+  .+|..+|+++
T Consensus        69 ~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~~  144 (315)
T 2ydy_A           69 AERRP-DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYG--KTKLDGEKAV  144 (315)
T ss_dssp             --------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH--HHHHHHHHHH
T ss_pred             cccCh-hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHH--HHHHHHHHHH
Confidence            97642 22233456677999999999999885 454 99999999998752      22233445555  7788899999


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      +..+++++++||+.|||
T Consensus       145 ~~~~~~~~~lR~~~v~G  161 (315)
T 2ydy_A          145 LENNLGAAVLRIPILYG  161 (315)
T ss_dssp             HHHCTTCEEEEECSEEC
T ss_pred             HHhCCCeEEEeeeeeeC
Confidence            98899999999999987

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.6e-24  Score=184.13  Aligned_cols=168  Identities=20%  Similarity=0.229  Sum_probs=120.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|++++++++.+++.    ...+.++.+|++|++++++++      
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999887766543321    235788999999999887653      


Q ss_pred             hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHH----HHHcc-CCC--CeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNL----VSALP-SSL--KRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l----~~a~~-~~~--~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|+||||||.......   ..+.....+++|+.|+..+    ++.++ .+.  ++||++||..++..  .+..+...
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~~~  186 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV--LPLSVTHF  186 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--CSCGGGHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc--CCCCCCch
Confidence            4589999999997642211   1111234568899995554    44443 443  79999999988632  23344556


Q ss_pred             HHHHHHH-----HHHHHHHH--hcCCCEEEEecceEE
Q 025619          219 FGVLKYK-----KMGEDFVQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k-----~~~e~~~~--~~gi~~~~vrPg~v~  248 (250)
                      |+.+|..     +.+..++.  ..||++++|+||+|.
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~  223 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE  223 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc
Confidence            6655542     12223344  679999999999985

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=3.3e-25  Score=180.50  Aligned_cols=147  Identities=20%  Similarity=0.208  Sum_probs=122.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++++ .       ..+++++.+|++|.++++++ +  +|+||||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~-------~~~~~~~~~D~~~~~~~~~~-~--~d~vi~~   72 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E-------HPRLDNPVGPLAELLPQLDG-S--IDTAFCC   72 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C-------CTTEECCBSCHHHHGGGCCS-C--CSEEEEC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c-------CCCceEEeccccCHHHHHHh-h--hcEEEEC
Confidence            567999999999999999999999998  99999998765 1       34688889999999999876 4  9999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi  237 (250)
                      ||.....   ..+.+..+++|+.++.+++++++ .+.++||++||..++...      ...  |..+|..+|++++..|+
T Consensus        73 a~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~------~~~--y~~sK~~~e~~~~~~~~  141 (215)
T 2a35_A           73 LGTTIKE---AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS------SIF--YNRVKGELEQALQEQGW  141 (215)
T ss_dssp             CCCCHHH---HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------SSH--HHHHHHHHHHHHTTSCC
T ss_pred             eeecccc---CCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCC------ccH--HHHHHHHHHHHHHHcCC
Confidence            9975421   12334466889999999999884 578899999999988531      234  45788999999999999


Q ss_pred             C-EEEEecceEEe
Q 025619          238 P-FTIISLCIYCI  249 (250)
Q Consensus       238 ~-~~~vrPg~v~~  249 (250)
                      + ++++|||+++|
T Consensus       142 ~~~~~vrp~~v~g  154 (215)
T 2a35_A          142 PQLTIARPSLLFG  154 (215)
T ss_dssp             SEEEEEECCSEES
T ss_pred             CeEEEEeCceeeC
Confidence            9 99999999986

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.91  E-value=2.4e-24  Score=187.28  Aligned_cols=161  Identities=16%  Similarity=0.127  Sum_probs=121.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC--CcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~--~D~vi  156 (250)
                      .++||+||||||+|+||++++++|+++|++|++++|+.+...+....  ..+++++.+|++|.++++++ +.+  +|+||
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~--~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~vi   94 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD--HPNLTFVEGSIADHALVNQL-IGDLQPDAVV   94 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC--CTTEEEEECCTTCHHHHHHH-HHHHCCSEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh--cCCceEEEEeCCCHHHHHHH-HhccCCcEEE
Confidence            45788999999999999999999999999999999986432221111  14788999999999998875 555  99999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccc----cCCCCc----chh-hHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK----FNELPW----SIM-NLFGVLKYKK  226 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~----~~~~~~----~~~-~~y~~~k~k~  226 (250)
                      ||||.....  ...+..  +++|+.|+.++++++. .+.++||++||.++++    ....+.    .+. ..|+  .+|.
T Consensus        95 h~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~--~sK~  168 (333)
T 2q1w_A           95 HTAASYKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYA--ISKS  168 (333)
T ss_dssp             ECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHH--HHHH
T ss_pred             ECceecCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchH--HHHH
Confidence            999976532  111112  6899999999999884 5788999999999886    321111    223 4554  6788


Q ss_pred             HHHHHHHh-cCCCEEEEecceEEe
Q 025619          227 MGEDFVQK-SGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~~~-~gi~~~~vrPg~v~~  249 (250)
                      ++|.+++. .. +++++||+.+||
T Consensus       169 ~~E~~~~~s~~-~~~ilR~~~v~g  191 (333)
T 2q1w_A          169 ANEDYLEYSGL-DFVTFRLANVVG  191 (333)
T ss_dssp             HHHHHHHHHTC-CEEEEEESEEES
T ss_pred             HHHHHHHhhhC-CeEEEeeceEEC
Confidence            88988887 66 999999999986

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=1.5e-24  Score=182.65  Aligned_cols=165  Identities=13%  Similarity=0.057  Sum_probs=118.2

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++++|++|||||+||||++++++|+++|++|+++ .|+.+..++..+++.  ..++.++.+|++|.+++++++      
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999998 555555444433221  456889999999999988654      


Q ss_pred             hCCCcEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          149 FEGVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++++|+||||||.......    +.+..+..+++|+.|+.++++++.+   ..++||++||..++..   +......|+.
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~~~~~~~Y~a  160 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG---GGPGALAYAT  160 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC---CSTTCHHHHH
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC---CCCCcHHHHH
Confidence            4689999999997632111    1111234568999999999998732   2468999999887721   2233455665


Q ss_pred             HHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          222 LKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|  .+++       .++... |++++|+||++.
T Consensus       161 sK--aa~~~l~~~la~e~~~~-I~vn~v~PG~v~  191 (259)
T 3edm_A          161 SK--GAVMTFTRGLAKEVGPK-IRVNAVCPGMIS  191 (259)
T ss_dssp             HH--HHHHHHHHHHHHHHTTT-CEEEEEEECCBC
T ss_pred             HH--HHHHHHHHHHHHHHCCC-CEEEEEEECCCc
Confidence            44  3333       233333 999999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.91  E-value=3.2e-25  Score=184.35  Aligned_cols=164  Identities=13%  Similarity=0.093  Sum_probs=117.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeE-EEeeCCCccCcchhh------hCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQV-CKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~-v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ||+|+||||+||||++++++|+++|++|+++ +|++++.+++.+++.  ..++.. +.+|++|.+++++++      +++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999998 898877665543221  335666 899999999888653      468


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.+    .+....|+.+|
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~~Y~~sK  156 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG----NPGQANYVASK  156 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----CSSBHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC----CCCCcchHHHH
Confidence            999999999764211   111122345688999977776654     246789999999877632    22345666554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .     .+.+..++...|+++++++||++.+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  187 (245)
T 2ph3_A          157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIET  187 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEEEeecC
Confidence            3     1122234455699999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.91  E-value=1.4e-25  Score=189.38  Aligned_cols=167  Identities=11%  Similarity=0.147  Sum_probs=119.0

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh----
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~----  148 (250)
                      +++++|++|||||+||||++++++|+++|++|++++|..   ++++++.+++.  ..++.++++|++|++++++++    
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            367899999999999999999999999999999987753   34444433222  456888999999999988754    


Q ss_pred             --hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 --FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                        ++++|+||||||.......   +.+..+..+++|+.|+.++++++.+   +.++||++||..++..    ......|+
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~----~~~~~~Y~  162 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY----TGFYSTYA  162 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH----HCCCCC--
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC----CCCCchhH
Confidence              4689999999998653211   1112234557899999999998732   4579999999887742    22233455


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++...||++++|+||+|.
T Consensus       163 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (262)
T 3ksu_A          163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMD  195 (262)
T ss_dssp             ---CHHHHHHHHHHHHTTTTTCEEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence            4442     233344555679999999999874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.91  E-value=4.5e-25  Score=186.05  Aligned_cols=152  Identities=23%  Similarity=0.218  Sum_probs=119.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+||||||+|+||++++++|+++|++|++++|++++..       ..+++++.+|++|.++++++ +.++|+||||||.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVHDL-VKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHHHH-HTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHHHH-HcCCCEEEECCcC
Confidence            578999999999999999999999999999999875321       23578899999999999875 7899999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--------CCCcchhhHHHHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      ..     ..+....+++|+.++.+++++++ .+.++||++||..+++..        +.+..+...|+  .+|..+|.++
T Consensus        74 ~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~~~  146 (267)
T 3ay3_A           74 SV-----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYG--LSKCFGEDLA  146 (267)
T ss_dssp             CS-----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHH--HHHHHHHHHH
T ss_pred             CC-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHH--HHHHHHHHHH
Confidence            52     11223456899999999999884 678899999999887531        12223445665  5566666554


Q ss_pred             ----HhcCCCEEEEecceEE
Q 025619          233 ----QKSGLPFTIISLCIYC  248 (250)
Q Consensus       233 ----~~~gi~~~~vrPg~v~  248 (250)
                          ++.|++++++|||++|
T Consensus       147 ~~~~~~~gi~~~~lrp~~v~  166 (267)
T 3ay3_A          147 SLYYHKFDIETLNIRIGSCF  166 (267)
T ss_dssp             HHHHHTTCCCEEEEEECBCS
T ss_pred             HHHHHHcCCCEEEEeceeec
Confidence                3579999999999986

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=3e-24  Score=179.81  Aligned_cols=159  Identities=18%  Similarity=0.115  Sum_probs=114.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV  155 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~v  155 (250)
                      ..+++|++|||||+||||++++++|+++|++|++++|+++..+++      ..+.++ +|+  .+++++++  +.++|+|
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~-~D~--~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVV-CDL--RKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEE-CCT--TTCHHHHHHHSCCCSEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh------CCeEEE-eeH--HHHHHHHHHHhcCCCEE
Confidence            367899999999999999999999999999999999998655442      256667 999  45555432  3489999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH--
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK--  225 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k--  225 (250)
                      |||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++.    +......|+.+|..  
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~a~~  161 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----PIENLYTSNSARMALT  161 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC----CCCCCchHHHHHHHHH
Confidence            99999764221   111122345588999988777654     34678999999998884    23344566654431  


Q ss_pred             ---HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 ---KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ---~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                         +.+..++...||++++|+||++.+
T Consensus       162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t  188 (249)
T 1o5i_A          162 GFLKTLSFEVAPYGITVNCVAPGWTET  188 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCCCcc
Confidence               222344556799999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.91  E-value=6.9e-25  Score=184.72  Aligned_cols=169  Identities=18%  Similarity=0.223  Sum_probs=119.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+. .+.+.+...  ..++.++++|++|++++++++      +
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3467999999999999999999999999999999776543 333332221  346889999999999988754      4


Q ss_pred             CCCcEEEEcCcCCCcCCC-----CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~-----~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|+||||||.......     ..+..+..+++|+.|+.++++++     +.+.++||++||......  .++.....|
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--~~~~~~~~Y  161 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA--PGWIYRSAF  161 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC--CCCTTCHHH
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc--CCCCCCchh
Confidence            689999999995322111     11122345688999999999976     346689999999855421  233445666


Q ss_pred             HHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          220 GVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.+|..     +.+..++...||++++|+||++.+
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  196 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIG  196 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccC
Confidence            655531     222344556799999999999853

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.91  E-value=1.8e-25  Score=187.09  Aligned_cols=166  Identities=17%  Similarity=0.152  Sum_probs=119.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+ +++++++.+++.  ..++.++.+|++|++++++++      +
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999998 766655433221  346889999999999888653      3


Q ss_pred             CCCcEEEEcCcC-CCcCC---CCCCCCCCcceehHHHHHHHHHHc----c-CC--C---CeEEEEccCcccccCCCCcch
Q 025619          150 EGVTHVICCTGT-TAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--L---KRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       150 ~~~D~vi~~Ag~-~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~---~~iV~iSS~~~~~~~~~~~~~  215 (250)
                      +++|+||||||. .....   .+.+.....+++|+.|+.++++++    . .+  .   ++||++||..++..   +.++
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---~~~~  160 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---GGPG  160 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC---CCTT
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC---CCCC
Confidence            589999999997 32111   111112335588999999988865    1 22  2   79999999887641   2233


Q ss_pred             hhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          216 MNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       216 ~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ...|+.+|  .+++       .++...||++++++||++.+
T Consensus       161 ~~~Y~~sK--~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t  199 (258)
T 3afn_B          161 AGLYGAAK--AFLHNVHKNWVDFHTKDGVRFNIVSPGTVDT  199 (258)
T ss_dssp             CHHHHHHH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred             chHHHHHH--HHHHHHHHHHHHhhcccCeEEEEEeCCCccc
Confidence            45666544  4443       33345699999999999864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.91  E-value=1.3e-24  Score=186.46  Aligned_cols=129  Identities=23%  Similarity=0.342  Sum_probs=97.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCc-cCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNP-KDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~-~~~~~~~------  148 (250)
                      .+++|+||||||+||||++++++|+++|++|++++|+.++.++..+++   ...++.++.+|++|. +++++++      
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999998766654332   234788999999998 7776543      


Q ss_pred             hCCCcEEEEcCcCCCcCC---------------------------------CCCCCCCCcceehHHHHHHHHHHc----c
Q 025619          149 FEGVTHVICCTGTTAFPS---------------------------------RRWDGDNTPEKVDWEGVRNLVSAL----P  191 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---------------------------------~~~~~~~~~~~~N~~g~~~l~~a~----~  191 (250)
                      ++++|+||||||......                                 ...+..+..+++|+.|+.++++++    +
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            468999999999864210                                 011111234689999999988876    2


Q ss_pred             -CCCCeEEEEccCcccc
Q 025619          192 -SSLKRIVLVSSVGVTK  207 (250)
Q Consensus       192 -~~~~~iV~iSS~~~~~  207 (250)
                       .+.++||++||..++.
T Consensus       169 ~~~~~~IV~isS~~~~~  185 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSL  185 (311)
T ss_dssp             TSSSCEEEEECCGGGSG
T ss_pred             cCCCCeEEEEecCCccc
Confidence             4568999999988764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.91  E-value=1.4e-24  Score=190.18  Aligned_cols=162  Identities=15%  Similarity=0.177  Sum_probs=120.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~  158 (250)
                      +||||||+||||++++++|+++ |++|++++|+.  +..+.+.+.....+++++.+|++|.++++++ +.  ++|+||||
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vih~   80 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRI-FEQYQPDAVMHL   80 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEEC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHH-HhhcCCCEEEEC
Confidence            6999999999999999999998 79999999875  2233332211245788999999999999875 55  89999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C--CCC-------eEEEEccCcccccCC-----------------C
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S--SLK-------RIVLVSSVGVTKFNE-----------------L  211 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~--~~~-------~iV~iSS~~~~~~~~-----------------~  211 (250)
                      ||..... ....+....+++|+.|+.++++++. .  +++       +||++||.++++...                 .
T Consensus        81 A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~  159 (361)
T 1kew_A           81 AAESHVD-RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CSCCCHH-HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CCCcChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence            9976411 1112344567899999999999884 3  655       999999998876321                 1


Q ss_pred             CcchhhHHHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          212 PWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       212 ~~~~~~~y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +..+.+.|+  .+|.++|.+++    +.|++++++|||.|||
T Consensus       160 ~~~~~~~Y~--~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G  199 (361)
T 1kew_A          160 AYAPSSPYS--ASKASSDHLVRAWRRTYGLPTIVTNCSNNYG  199 (361)
T ss_dssp             CCCCCSHHH--HHHHHHHHHHHHHHHHHCCCEEEEEECEEES
T ss_pred             CCCCCCccH--HHHHHHHHHHHHHHHHhCCcEEEEeeceeEC
Confidence            234455666  56666665554    3599999999999987

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.91  E-value=6.1e-24  Score=190.80  Aligned_cols=162  Identities=18%  Similarity=0.208  Sum_probs=119.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH---hhhhCc-----------CCCCCeeEEEeeCCCccCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGK-----------QDEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~---~~~~~~-----------~~~~~~~~v~~Dl~d~~~~  144 (250)
                      ...+|+||||||+|+||++++++|+++|++|++++|+++..   +.+.+.           ....++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            35678999999999999999999999999999999987622   111110           0135789999999999999


Q ss_pred             chhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccccc------------CCCC
Q 025619          145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF------------NELP  212 (250)
Q Consensus       145 ~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~------------~~~~  212 (250)
                      . . ++++|+||||||....    ..+....+++|+.|+.+++++++.+.++||++||..+ +.            ++.+
T Consensus       146 ~-~-~~~~d~Vih~A~~~~~----~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          146 V-L-PENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             C-C-SSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred             C-C-cCCCCEEEECCcccCC----CCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence            8 4 7899999999998642    2244567799999999999998667899999999988 31            1111


Q ss_pred             ---cchhhHHHHHHHHHHHHHHHHh---cCCCEEEEecceEEe
Q 025619          213 ---WSIMNLFGVLKYKKMGEDFVQK---SGLPFTIISLCIYCI  249 (250)
Q Consensus       213 ---~~~~~~y~~~k~k~~~e~~~~~---~gi~~~~vrPg~v~~  249 (250)
                         ..+.+.|+  .+|..+|.+++.   .|++++++|||.|+|
T Consensus       219 ~~~~~~~~~Y~--~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G  259 (427)
T 4f6c_A          219 YKGQLLTSPYT--RSKFYSELKVLEAVNNGLDGRIVRVGNLTS  259 (427)
T ss_dssp             CSSCCCCSHHH--HHHHHHHHHHHHHHHTTCCEEEEEECCEES
T ss_pred             ccCCCCCCchH--HHHHHHHHHHHHHHHcCCCEEEEeCCeeec
Confidence               12345555  667777776654   799999999999987

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.91  E-value=1.3e-24  Score=183.31  Aligned_cols=162  Identities=13%  Similarity=0.125  Sum_probs=118.1

Q ss_pred             CCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------
Q 025619           80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        80 ~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +++|++|||||+  ||||++++++|+++|++|++++|++   +..+++.+..  ....++++|++|++++++++      
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc--CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence            678999999999  9999999999999999999999987   2333332221  23478999999999887653      


Q ss_pred             hCCCcEEEEcCcCCCc----CC----CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhh
Q 025619          149 FEGVTHVICCTGTTAF----PS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~----~~----~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                      ++++|+||||||....    ..    ...+..+..+++|+.|+.++++++.+   ..++||++||..++.    +.+...
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~  160 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNYN  160 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTTT
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc----CCCCch
Confidence            4589999999997642    00    11122344668999999999998732   236999999988773    233345


Q ss_pred             HHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|  .+++       .++...||++++|+||++.+
T Consensus       161 ~Y~~sK--~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  197 (265)
T 1qsg_A          161 VMGLAK--ASLEANVRYMANAMGPEGVRVNAISAGPIRT  197 (265)
T ss_dssp             HHHHHH--HHHHHHHHHHHHHHTTTTEEEEEEEECCCCC
T ss_pred             HHHHHH--HHHHHHHHHHHHHhhhcCeEEEEEEeCCCcc
Confidence            666544  3333       33445699999999999864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.91  E-value=9.9e-25  Score=184.82  Aligned_cols=165  Identities=19%  Similarity=0.194  Sum_probs=120.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .++|+||||||+||||++++++|+++|++|+++ .|+.+..+++.+.+.  ..++.++.+|++|.+++++++      ++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999887 777776665543321  457889999999999888654      46


Q ss_pred             CCcEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----cC----CCCeEEEEccCcccccCCCCcchhhH
Q 025619          151 GVTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PS----SLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~~----~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++|+||||||....+..    ..+..+..+++|+.|+.++++++    ++    +.++||++||..++....   .....
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~~  180 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA---TQYVD  180 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---TTCHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---CCcch
Confidence            89999999998653111    12223445689999999988865    22    357899999988874221   12244


Q ss_pred             HHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          219 FGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                      |+.+|  .+++       .++...||++++|+||+|.+
T Consensus       181 Y~asK--aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t  216 (272)
T 4e3z_A          181 YAASK--AAIDTFTIGLAREVAAEGIRVNAVRPGIIET  216 (272)
T ss_dssp             HHHHH--HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-
T ss_pred             hHHHH--HHHHHHHHHHHHHHHHcCcEEEEEecCCCcC
Confidence            55444  4333       44556799999999999854

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.91  E-value=5.7e-25  Score=188.83  Aligned_cols=157  Identities=11%  Similarity=0.078  Sum_probs=121.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~  157 (250)
                      +|+||||||+|+||++++++|+++  |++|++++|++++.+ +.     .+++++.+|++|.++++++ +.  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~-~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-----NSGPFEVVNALDFNQIEHL-VEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-----HSSCEEECCTTCHHHHHHH-HHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-----CCCceEEecCCCHHHHHHH-HhhcCCCEEEE
Confidence            578999999999999999999999  899999999865532 11     2467899999999999875 55  8999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--------CCCcchhhHHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~~  228 (250)
                      +||.....  ...+....+++|+.|+.+++++++ .+.++||++||.++++..        ..+..+.+.|+  .+|..+
T Consensus        75 ~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~--~sK~~~  150 (312)
T 2yy7_A           75 MAALLSAT--AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYG--ISKQAG  150 (312)
T ss_dssp             CCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHH--HHHHHH
T ss_pred             CCccCCCc--hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhH--HHHHHH
Confidence            99975421  012334466899999999999884 578899999999988642        12233455666  556666


Q ss_pred             HHHH----HhcCCCEEEEecceEEe
Q 025619          229 EDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       229 e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      |.++    ++.|++++++||+.+||
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~g  175 (312)
T 2yy7_A          151 ERWCEYYHNIYGVDVRSIRYPGLIS  175 (312)
T ss_dssp             HHHHHHHHHHHCCEEECEEECEEEC
T ss_pred             HHHHHHHHHhcCCcEEEEeCCeEec
Confidence            6554    34599999999999997

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=2.9e-24  Score=183.16  Aligned_cols=166  Identities=16%  Similarity=0.157  Sum_probs=120.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+||||||+||||++++++|+++|++|++++|++++++++.+++   ...++.++.+|++|.+++++++      +
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999998776654322   1236788999999998887643      4


Q ss_pred             CCCcEEEEc-CcCCCcCCCC--CCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICC-TGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~-Ag~~~~~~~~--~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +++|+|||| ||....+..+  .+.....+++|+.|+.++++++    +++.++||++||..++.    +.+....|+.+
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~as  180 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----AYPMVAAYSAS  180 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS----CCTTCHHHHHH
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc----CCCCccHHHHH
Confidence            689999999 5654322111  1112335688999999988876    23457999999998873    33344566655


Q ss_pred             HHHH-----HHHHHH--HhcCCCEEEEecceEE
Q 025619          223 KYKK-----MGEDFV--QKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k~-----~~e~~~--~~~gi~~~~vrPg~v~  248 (250)
                      |...     .+..++  +..||++++++||++.
T Consensus       181 K~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~  213 (286)
T 1xu9_A          181 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  213 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC
Confidence            5411     122233  4569999999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.90  E-value=1.2e-24  Score=183.84  Aligned_cols=164  Identities=16%  Similarity=0.164  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|+||||||+||||++++++|+++|++|++++| ++++.+++.+++.  ..++.++.+|++|++++++++      +
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999999 7766655433221  356888999999999888653      3


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCccc-ccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVT-KFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~-~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++    +++ ++||++||..++ ..    ......|+.
T Consensus        98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~----~~~~~~Y~~  172 (274)
T 1ja9_A           98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG----IPNHALYAG  172 (274)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS----CCSCHHHHH
T ss_pred             CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC----CCCCchHHH
Confidence            58999999999764211   111112345688999999998866    224 799999999887 32    223345654


Q ss_pred             HHHHHHHHHH-------HHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGEDF-------VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e~~-------~~~~gi~~~~vrPg~v~~  249 (250)
                        +|.+++.+       +...|+++++++||++.+
T Consensus       173 --sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t  205 (274)
T 1ja9_A          173 --SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKT  205 (274)
T ss_dssp             --HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             --HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccc
Confidence              44444433       344699999999998853

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=8.8e-25  Score=190.54  Aligned_cols=164  Identities=19%  Similarity=0.182  Sum_probs=121.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh----------HhhhhCcCCCCCeeEEEeeCCCccCcchhhhC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----------ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~----------~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      |+|+||||||+|+||++++++|+++|++|++++|+...          .+.+.+. ...+++++.+|++|.++++++ +.
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~-~~   78 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRL-FK   78 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHH-HH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHHHH-HH
Confidence            35799999999999999999999999999999985432          2222110 134688999999999998875 45


Q ss_pred             --CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcch-hhHH
Q 025619          151 --GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSI-MNLF  219 (250)
Q Consensus       151 --~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~-~~~y  219 (250)
                        ++|+|||+||...... ...+....+++|+.|+.+++++++ .++++||++||.++++..       +.+..+ ...|
T Consensus        79 ~~~~d~vih~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y  157 (348)
T 1ek6_A           79 KYSFMAVIHFAGLKAVGE-SVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY  157 (348)
T ss_dssp             HCCEEEEEECCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred             hcCCCEEEECCCCcCccc-hhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch
Confidence              8999999999754211 112334466899999999999884 578899999999988632       122223 4555


Q ss_pred             HHHHHHHHHHHHHHh---cC--CCEEEEecceEEe
Q 025619          220 GVLKYKKMGEDFVQK---SG--LPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~k~~~e~~~~~---~g--i~~~~vrPg~v~~  249 (250)
                      +  .+|..+|.+++.   .+  ++++++||+.+||
T Consensus       158 ~--~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G  190 (348)
T 1ek6_A          158 G--KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTG  190 (348)
T ss_dssp             H--HHHHHHHHHHHHHHHHCTTCEEEEEEECEEEC
T ss_pred             H--HHHHHHHHHHHHHHhcCCCcceEEEeeccccC
Confidence            5  566667765543   24  9999999999986

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.90  E-value=1.6e-24  Score=182.80  Aligned_cols=165  Identities=10%  Similarity=0.063  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChhhHhh---hhCcCCCCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~~~~~---~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|+||||||+  ||||++++++|+++|++|++++|+....+.   +.+.  ..++.++++|++|.+++++++     
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--FGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH--cCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            5789999999999  999999999999999999999998543332   2222  235789999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcC---CC-----CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchh
Q 025619          149 -FEGVTHVICCTGTTAFP---SR-----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~---~~-----~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                       ++++|+||||||.....   ..     ..+.....+++|+.|+.++++++.+   ..++||++||..++.    +.+..
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~  164 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----AIPNY  164 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTT
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----CCCCc
Confidence             46899999999986521   11     1111234558899999999998732   246899999998874    34445


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..|+.+|.     .+.+..++...||++++|+||+|.+
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T  202 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKT  202 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC--
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence            66765553     1223344556799999999999853

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.5e-23  Score=191.09  Aligned_cols=165  Identities=20%  Similarity=0.222  Sum_probs=123.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC---CCeEEEEecChhhHhh---hhCcCC--------------CCCeeEEEeeC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR---NIKSRLLLRDPEKATT---LFGKQD--------------EETLQVCKGDT  138 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~---G~~V~~~~R~~~~~~~---~~~~~~--------------~~~~~~v~~Dl  138 (250)
                      ...+|+||||||+|+||++++++|+++   |++|++++|+.+....   +.+.+.              ..+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            457899999999999999999999999   9999999998654321   112211              25899999999


Q ss_pred             CCc------cCcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--
Q 025619          139 RNP------KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--  209 (250)
Q Consensus       139 ~d~------~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--  209 (250)
                      +++      ++++++ ++++|+||||||....     .+....+++|+.|+.+++++++ .++++||++||.++++..  
T Consensus       150 ~~~~~gld~~~~~~~-~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~  223 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRL-AETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP  223 (478)
T ss_dssp             TSGGGGCCHHHHHHH-HHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred             CCcccCCCHHHHHHH-HcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence            954      455543 6789999999998753     3445677899999999999885 577899999999887632  


Q ss_pred             -----CCCcchhhH---------HHHHHHHHHHHHHHHh----cCCCEEEEecceEEe
Q 025619          210 -----ELPWSIMNL---------FGVLKYKKMGEDFVQK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       210 -----~~~~~~~~~---------y~~~k~k~~~e~~~~~----~gi~~~~vrPg~v~~  249 (250)
                           +.+..+.+.         .+|..+|..+|.+++.    .|++++++|||+|||
T Consensus       224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G  281 (478)
T 4dqv_A          224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILA  281 (478)
T ss_dssp             TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred             CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeC
Confidence                 111112122         1144667777766654    599999999999997

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.90  E-value=7.9e-25  Score=177.49  Aligned_cols=156  Identities=13%  Similarity=0.085  Sum_probs=117.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh--CCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~~D~vi~~Ag  160 (250)
                      |+++||||+||||++++++|+++  +|++++|++++.+.+.+++..   +++.+|++|++++++++-  +++|+||||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   75 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAKALLEEAGPLDLLVHAVG   75 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999998  999999999887766543322   788999999999987532  38999999999


Q ss_pred             CCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHH------
Q 025619          161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGED------  230 (250)
Q Consensus       161 ~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~------  230 (250)
                      ......   ...++....+++|+.|+.+++++++ .+.++||++||..++.    +..+...|+.+|  ..++.      
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~~sK--~a~~~~~~~~~  149 (207)
T 2yut_A           76 KAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV----QVPGFAAYAAAK--GALEAYLEAAR  149 (207)
T ss_dssp             CCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH----SSTTBHHHHHHH--HHHHHHHHHHH
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc----CCCCcchHHHHH--HHHHHHHHHHH
Confidence            764221   1122223456889999999999984 4568999999998874    333455666544  44433      


Q ss_pred             -HHHhcCCCEEEEecceEEe
Q 025619          231 -FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 -~~~~~gi~~~~vrPg~v~~  249 (250)
                       ++...|+++++++||++++
T Consensus       150 ~~~~~~gi~v~~v~pg~v~t  169 (207)
T 2yut_A          150 KELLREGVHLVLVRLPAVAT  169 (207)
T ss_dssp             HHHHTTTCEEEEECCCCBCS
T ss_pred             HHHhhhCCEEEEEecCcccC
Confidence             3344799999999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.90  E-value=1.5e-24  Score=180.85  Aligned_cols=157  Identities=17%  Similarity=0.070  Sum_probs=116.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~v  155 (250)
                      +||++|||||+||||++++++|++ .|++|++++|+++..        ...+.++++|++|++++++++    ++++|+|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999999999 789999999876421        235688999999999988754    2489999


Q ss_pred             EEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHH-----
Q 025619          156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----  224 (250)
Q Consensus       156 i~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----  224 (250)
                      |||||......   .+.+..+..+++|+.|+.++++++.+   ..++||++||..++.    +.+....|+.+|.     
T Consensus        75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~asKaa~~~~  150 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI----AKPNSFAYTLSKGAIAQM  150 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC----CCTTBHHHHHHHHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc----CCCCCchhHHHHHHHHHH
Confidence            99999865321   11112234568999999999998732   126899999998873    3444556665553     


Q ss_pred             HHHHHHHHHhcCCCEEEEecceEEe
Q 025619          225 KKMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .+.+..++...||++++|+||+|.+
T Consensus       151 ~~~la~e~~~~gi~v~~v~PG~v~T  175 (244)
T 4e4y_A          151 TKSLALDLAKYQIRVNTVCPGTVDT  175 (244)
T ss_dssp             HHHHHHHHGGGTCEEEEEEESCBCC
T ss_pred             HHHHHHHHHHcCeEEEEEecCccCc
Confidence            2223344557899999999999853

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=2.5e-24  Score=186.70  Aligned_cols=167  Identities=21%  Similarity=0.181  Sum_probs=122.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh--hhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi  156 (250)
                      .++|+||||||+|+||++++++|+++|++|++++|++++..  .+.......+++++.+|++|.+++++++-+ ++|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            45789999999999999999999999999999999865421  111110134688999999999998875322 589999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEccCcccccC-------CCCcchhhHHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~  227 (250)
                      |+||..... ..+.+....+++|+.|+.+++++++ .++ ++||++||.++|+..       +.+..+.+.|+  .+|.+
T Consensus        92 h~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~sK~~  168 (335)
T 1rpn_A           92 NLAAQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYG--VAKLY  168 (335)
T ss_dssp             ECCSCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHH
T ss_pred             ECccccchh-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhH--HHHHH
Confidence            999975421 1122344566899999999999885 464 899999999988642       22333445666  56666


Q ss_pred             HHHHHH----hcCCCEEEEecceEEe
Q 025619          228 GEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +|.+++    +.|++++++||+.+||
T Consensus       169 ~e~~~~~~~~~~~~~~~i~r~~~v~G  194 (335)
T 1rpn_A          169 GHWITVNYRESFGLHASSGILFNHES  194 (335)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHHcCCcEEEEeeCcccC
Confidence            666554    3599999999999986

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.90  E-value=3.7e-24  Score=181.07  Aligned_cols=164  Identities=12%  Similarity=0.050  Sum_probs=120.5

Q ss_pred             CCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|+++||||  +||||++++++|+++|++|++++|+.++ ++++.+++ ..++.++++|++|++++++++      +
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            467899999999  9999999999999999999999998765 35555444 346788999999999888654      4


Q ss_pred             C---CCcEEEEcCcCCCc-----CC---CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcch
Q 025619          150 E---GVTHVICCTGTTAF-----PS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       150 ~---~~D~vi~~Ag~~~~-----~~---~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                      +   ++|+||||||....     ..   ..+++....+++|+.|+.++++++.+   ..++||++||....     +.+.
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-----~~~~  157 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-----AMPA  157 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-----CCTT
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-----ccCc
Confidence            5   89999999997641     11   11112233558899999999998732   23699999997753     2233


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ...|+.+|.     .+.+..++...||++++|+||++.
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (269)
T 2h7i_A          158 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR  195 (269)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            456665543     122334455679999999999874

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=4.6e-24  Score=189.60  Aligned_cols=166  Identities=14%  Similarity=0.120  Sum_probs=119.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh-----------------hhhC--cCCCCCeeEEEeeCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-----------------TLFG--KQDEETLQVCKGDTRN  140 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~-----------------~~~~--~~~~~~~~~v~~Dl~d  140 (250)
                      ..+++||||||+|+||++++++|+++|++|++++|......                 .+.+  .....+++++.+|++|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46789999999999999999999999999999998754311                 1100  0113468899999999


Q ss_pred             ccCcchhhhCC--CcEEEEcCcCCCcCCCCCCCCC---CcceehHHHHHHHHHHcc-CCC-CeEEEEccCcccccCC---
Q 025619          141 PKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGDN---TPEKVDWEGVRNLVSALP-SSL-KRIVLVSSVGVTKFNE---  210 (250)
Q Consensus       141 ~~~~~~~~~~~--~D~vi~~Ag~~~~~~~~~~~~~---~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS~~~~~~~~---  210 (250)
                      .++++++ +.+  +|+||||||...... .+.++.   ..+++|+.|+.+++++++ .+. ++||++||.++|+...   
T Consensus        89 ~~~~~~~-~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~  166 (404)
T 1i24_A           89 FEFLAES-FKSFEPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI  166 (404)
T ss_dssp             HHHHHHH-HHHHCCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred             HHHHHHH-HhccCCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCC
Confidence            9998875 454  999999999764211 111111   255889999999999885 455 5999999998886432   


Q ss_pred             -----------------CCcchhhHHHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          211 -----------------LPWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       211 -----------------~~~~~~~~y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                                       .+..+.+.|+  .+|.++|.+++    +.|++++++|||.|||
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~--~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~G  224 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYH--LSKVHDSHNIAFTCKAWGIRATDLNQGVVYG  224 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             CccccccccccccccccCCCCCCChhH--HHHHHHHHHHHHHHHhcCCeEEEEecceeeC
Confidence                             1233445666  55666665543    4599999999999997

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=1.4e-24  Score=186.78  Aligned_cols=159  Identities=20%  Similarity=0.218  Sum_probs=118.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag  160 (250)
                      |+||||||+||||++++++|+++|++|++++|..+.....   + ..+++++.+|++|.++++++ +.  ++|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~-~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN---V-PKGVPFFRVDLRDKEGVERA-FREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG---S-CTTCCEECCCTTCHHHHHHH-HHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh---c-ccCeEEEECCCCCHHHHHHH-HHhcCCCEEEECcc
Confidence            3799999999999999999999999999999854321111   1 23677889999999998875 45  8999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccC-ccccc--------CCCCcchhhHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV-GVTKF--------NELPWSIMNLFGVLKYKKMGED  230 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~-~~~~~--------~~~~~~~~~~y~~~k~k~~~e~  230 (250)
                      ..... ..+.+....+++|+.|+.+++++++ .+.++||++||. ++|+.        ++.+..+...|+  .+|.++|.
T Consensus        76 ~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~--~sK~~~e~  152 (311)
T 2p5y_A           76 QASVK-VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYA--ASKAAFEH  152 (311)
T ss_dssp             CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHH--HHHHHHHH
T ss_pred             ccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHH--HHHHHHHH
Confidence            75421 1112334466899999999999884 578899999998 66643        111223445666  55666665


Q ss_pred             HH----HhcCCCEEEEecceEEe
Q 025619          231 FV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ++    ++.|++++++||+.+||
T Consensus       153 ~~~~~~~~~~~~~~~lrp~~v~G  175 (311)
T 2p5y_A          153 YLSVYGQSYGLKWVSLRYGNVYG  175 (311)
T ss_dssp             HHHHHHHHHCCCEEEEEECEEEC
T ss_pred             HHHHHHHHcCCCEEEEeeccccC
Confidence            55    34699999999999997

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.90  E-value=2.5e-24  Score=179.60  Aligned_cols=163  Identities=14%  Similarity=0.107  Sum_probs=105.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhh--hCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI--FEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~--~~~~D  153 (250)
                      ++++|++|||||+||||++++++|++ |++|++++|++++++++.+   ..++.++.+|++|.++   +.+.+  ++++|
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999999999988 9999999999988877654   2468889999998743   22221  46899


Q ss_pred             EEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          154 HVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      +||||||.......   ..+..+..+++|+.|+.++++++    ++..++||++||..++.    +.+....|+.+|.. 
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----PHPGNTIYAASKHAL  153 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------CHHHHHHHHHH
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----CCCCchHHHHHHHHH
Confidence            99999998653211   11112345688999988888866    23338999999998884    33445566655431 


Q ss_pred             ----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 ----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                          +.+..++...||++++|+||++.+
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t  181 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNT  181 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC--
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccC
Confidence                122234456799999999999854

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.90  E-value=1.4e-24  Score=184.33  Aligned_cols=165  Identities=17%  Similarity=0.156  Sum_probs=116.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.++.+.+.+.+.  ..++.++.+|++|.+++++++      ++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG  110 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5688999999999999999999999999999999998766554432221  346888999999999887654      45


Q ss_pred             CCcEEEEcCcCCCcCCCCC-----CCCCCcceehHHHHHHHH----HHcc-CCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          151 GVTHVICCTGTTAFPSRRW-----DGDNTPEKVDWEGVRNLV----SALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~-----~~~~~~~~~N~~g~~~l~----~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++|+||||||.........     +.....+++|+.|+.++.    +.++ .+.++||++||..++...  +..+...|+
T Consensus       111 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~Y~  188 (279)
T 3ctm_A          111 TIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN--IPQLQAPYN  188 (279)
T ss_dssp             CCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----CCHHHHH
T ss_pred             CCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC--CCCCcccHH
Confidence            7999999999764201111     111235578999965544    4443 467899999999876321  133445666


Q ss_pred             HHHHHHHHHHH-------HHhcCCCEEEEecceEE
Q 025619          221 VLKYKKMGEDF-------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~k~~~e~~-------~~~~gi~~~~vrPg~v~  248 (250)
                      .+  |.+++.+       +...| ++++|+||++.
T Consensus       189 ~s--K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~  220 (279)
T 3ctm_A          189 TA--KAACTHLAKSLAIEWAPFA-RVNTISPGYID  220 (279)
T ss_dssp             HH--HHHHHHHHHHHHHHTTTTC-EEEEEEECSBS
T ss_pred             HH--HHHHHHHHHHHHHHhcccC-CEEEEeccCCc
Confidence            44  4444433       33467 99999999874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.90  E-value=5.1e-24  Score=188.98  Aligned_cols=164  Identities=19%  Similarity=0.172  Sum_probs=120.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHH-HCCCeEEEEecChhh---------Hhhhh---CcCC----CCC---eeEEEeeCCCcc
Q 025619           83 KLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEK---------ATTLF---GKQD----EET---LQVCKGDTRNPK  142 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~R~~~~---------~~~~~---~~~~----~~~---~~~v~~Dl~d~~  142 (250)
                      |+||||||+|+||++++++|+ ++|++|++++|+...         .+.+.   +.+.    ..+   ++++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            589999999999999999999 999999999997543         22221   1111    124   889999999999


Q ss_pred             Ccchhhh--CCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC---------
Q 025619          143 DLDPAIF--EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE---------  210 (250)
Q Consensus       143 ~~~~~~~--~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~---------  210 (250)
                      ++++++-  +++|+||||||...... ...+....+++|+.|+.+++++++ .++++||++||.++++...         
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~-~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGE-SVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCc-chhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence            9887532  34999999999764211 112334567899999999999884 6788999999998886432         


Q ss_pred             -----CCcchhhHHHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          211 -----LPWSIMNLFGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       211 -----~~~~~~~~y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                           .+..+...|+  .+|.++|.+++    +.|++++++||++|||
T Consensus       162 ~~~E~~~~~p~~~Y~--~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G  207 (397)
T 1gy8_A          162 PIDINAKKSPESPYG--ESKLIAERMIRDCAEAYGIKGICLRYFNACG  207 (397)
T ss_dssp             CBCTTSCCBCSSHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             CcCccCCCCCCCchH--HHHHHHHHHHHHHHHHHCCcEEEEeccceeC
Confidence                 1222345555  56666666554    3599999999999986

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.90  E-value=4.9e-24  Score=185.31  Aligned_cols=159  Identities=15%  Similarity=0.140  Sum_probs=119.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-CcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+||||||+|+||++++++|+++ |++|++++|+.++.+.+.+   ..+++++.+|++|.+ .++++ +.++|+|||+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~-~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIEYH-VKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT---CTTEEEEECCTTTCSHHHHHH-HHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc---CCCeEEEeccccCcHHHHHhh-ccCCCEEEEccc
Confidence            47999999999999999999998 8999999999876654322   457899999999854 56654 678999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC-Cc-------------chhhHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL-PW-------------SIMNLFGVLKYK  225 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~-~~-------------~~~~~y~~~k~k  225 (250)
                      ..... ....+....+++|+.++.+++++++ .+ ++||++||.++++.... ++             .+.+.|+  .+|
T Consensus        77 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~--~sK  152 (345)
T 2bll_A           77 IATPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS--VSK  152 (345)
T ss_dssp             CCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH--HHH
T ss_pred             ccCcc-chhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccH--HHH
Confidence            75421 0011233456889999999999885 45 89999999998864211 11             1233555  566


Q ss_pred             HHHHHHH----HhcCCCEEEEecceEEe
Q 025619          226 KMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ..+|+++    ++.|++++++|||.|||
T Consensus       153 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G  180 (345)
T 2bll_A          153 QLLDRVIWAYGEKEGLQFTLFRPFNWMG  180 (345)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEEC
T ss_pred             HHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence            6667655    34699999999999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.90  E-value=3.2e-24  Score=180.72  Aligned_cols=167  Identities=16%  Similarity=0.051  Sum_probs=119.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC---CeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      .+++|+||||||+||||++++++|+++|   ++|++++|+.++.+.+.+.. ...++.++.+|++|.+++++++      
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            5688999999999999999999999999   99999999986544332111 0347889999999999988653      


Q ss_pred             hC--CCcEEEEcCcCCC-cCC---CCCCCCCCcceehHHHHHHHHHHcc-----C------C-----CCeEEEEccCccc
Q 025619          149 FE--GVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S------S-----LKRIVLVSSVGVT  206 (250)
Q Consensus       149 ~~--~~D~vi~~Ag~~~-~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~------~-----~~~iV~iSS~~~~  206 (250)
                      ++  ++|+||||||... ...   ...+.....+++|+.|+.++++++.     .      +     .++||++||..++
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence            23  7999999999864 111   1111223356889999999998761     1      2     5799999999887


Q ss_pred             ccCCCCcchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEE
Q 025619          207 KFNELPWSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       207 ~~~~~~~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~  248 (250)
                      .... +..+...|+.+|  .+++       .++...||++++|+||+|.
T Consensus       178 ~~~~-~~~~~~~Y~~sK--~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  223 (267)
T 1sny_A          178 IQGN-TDGGMYAYRTSK--SALNAATKSLSVDLYPQRIMCVSLHPGWVK  223 (267)
T ss_dssp             STTC-CSCCCHHHHHHH--HHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             ccCC-CCCCchHHHHHH--HHHHHHHHHHHHHhhcCCcEEEEeCCccee
Confidence            5321 112344566544  4433       3344579999999999874

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.90  E-value=2.2e-24  Score=181.38  Aligned_cols=164  Identities=15%  Similarity=0.106  Sum_probs=120.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHH---CCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      ++++|++|||||+||||++++++|++   +|++|++++|++++++++.+++.    ..++.++++|++|++++++++   
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999   89999999999887776544331    346788999999999887643   


Q ss_pred             -----hCCCc--EEEEcCcCCCcC-C-----CCCCCCCCcceehHHHHHHHHHHc-----cC--CCCeEEEEccCccccc
Q 025619          149 -----FEGVT--HVICCTGTTAFP-S-----RRWDGDNTPEKVDWEGVRNLVSAL-----PS--SLKRIVLVSSVGVTKF  208 (250)
Q Consensus       149 -----~~~~D--~vi~~Ag~~~~~-~-----~~~~~~~~~~~~N~~g~~~l~~a~-----~~--~~~~iV~iSS~~~~~~  208 (250)
                           ++++|  +||||||..... .     ...+..+..+++|+.|+.++++++     +.  +.++||++||..++. 
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence                 13678  999999975321 1     111223446688999999998876     22  347899999998873 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHH----h-cCCCEEEEecceEE
Q 025619          209 NELPWSIMNLFGVLKYKKMGEDFVQ----K-SGLPFTIISLCIYC  248 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~k~~~e~~~~----~-~gi~~~~vrPg~v~  248 (250)
                         +.+....|+.+  |.+++.+.+    + .+|++++|+||++-
T Consensus       162 ---~~~~~~~Y~as--Kaa~~~~~~~la~e~~~i~vn~v~PG~v~  201 (259)
T 1oaa_A          162 ---PYKGWGLYCAG--KAARDMLYQVLAAEEPSVRVLSYAPGPLD  201 (259)
T ss_dssp             ---CCTTCHHHHHH--HHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred             ---CCCCccHHHHH--HHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence               33444566644  444443321    2 24999999999873

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.90  E-value=3.2e-24  Score=184.56  Aligned_cols=155  Identities=15%  Similarity=0.117  Sum_probs=112.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh----HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~----~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+.    .+.+.......+++++.+|++           ++|+|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------~~d~v   73 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------DVRLV   73 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------TEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------cCCEE
Confidence            467899999999999999999999999999999998752    221111111233444444443           78999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~  227 (250)
                      ||+||..... ..+......++ |+.++.+++++++ .++++||++||.++|+..       +.+..+.+.|+  .+|..
T Consensus        74 i~~a~~~~~~-~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~--~sK~~  149 (321)
T 3vps_A           74 YHLASHKSVP-RSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYA--ASKVG  149 (321)
T ss_dssp             EECCCCCCHH-HHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHH
T ss_pred             EECCccCChH-HHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhH--HHHHH
Confidence            9999976521 12334455667 9999999999984 578999999999998742       23344556666  56666


Q ss_pred             HHHHHHh----cCC-CEEEEecceEEe
Q 025619          228 GEDFVQK----SGL-PFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~~----~gi-~~~~vrPg~v~~  249 (250)
                      +|++++.    .|+ +++++||+.+||
T Consensus       150 ~E~~~~~~~~~~~~~~~~ilRp~~v~G  176 (321)
T 3vps_A          150 LEMVAGAHQRASVAPEVGIVRFFNVYG  176 (321)
T ss_dssp             HHHHHHHHHHSSSSCEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHcCCCceEEEEeccccC
Confidence            6665543    689 999999999997

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.90  E-value=1.5e-23  Score=182.72  Aligned_cols=162  Identities=15%  Similarity=0.163  Sum_probs=116.4

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh-hhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~-~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +.+++|+||||||+|+||++++++|+++|++|++++|+...... +.......+++++.+|++|..      +.++|+||
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~d~vi   96 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------YIEVDQIY   96 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------CCCCSEEE
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------hcCCCEEE
Confidence            45678999999999999999999999999999999997543211 111112357889999998752      46799999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC------------CCcchhhHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLK  223 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k  223 (250)
                      |+||...... ...+....+++|+.|+.+++++++ .+. ++|++||.++|+...            .+..+.+.|+  .
T Consensus        97 h~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~--~  172 (343)
T 2b69_A           97 HLASPASPPN-YMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD--E  172 (343)
T ss_dssp             ECCSCCSHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH--H
T ss_pred             ECccccCchh-hhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchH--H
Confidence            9999764211 112333456899999999999885 454 999999998886321            2333445566  5


Q ss_pred             HHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          224 YKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       224 ~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +|..+|.++    ++.|++++++|||.+||
T Consensus       173 sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G  202 (343)
T 2b69_A          173 GKRVAETMCYAYMKQEGVEVRVARIFNTFG  202 (343)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHHHhCCcEEEEEEcceeC
Confidence            566666554    34699999999999997

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.90  E-value=8.8e-25  Score=189.67  Aligned_cols=163  Identities=13%  Similarity=0.103  Sum_probs=119.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC----------hhhHhhhhCcCC--CCCeeEEEeeCCCccCcch
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------PEKATTLFGKQD--EETLQVCKGDTRNPKDLDP  146 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~----------~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~  146 (250)
                      .+++|++|||||+||||++++++|+++|++|++++|+          .+.++++.+++.  ..++.++.+|++|.+++++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            5789999999999999999999999999999999987          444444433321  3567889999999999886


Q ss_pred             hh------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc----C----C---CCeEEEEccCccc
Q 025619          147 AI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S----S---LKRIVLVSSVGVT  206 (250)
Q Consensus       147 ~~------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~----~----~---~~~iV~iSS~~~~  206 (250)
                      ++      ++++|+||||||......   .+.+..+..+++|+.|+.++++++.    .    +   .++||++||..++
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            54      468999999999865321   1112223456889999999988761    1    1   2699999998887


Q ss_pred             ccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecc
Q 025619          207 KFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLC  245 (250)
Q Consensus       207 ~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg  245 (250)
                      .    +......|+.+|.     .+.+..++...||++++|+||
T Consensus       184 ~----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG  223 (322)
T 3qlj_A          184 Q----GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS  223 (322)
T ss_dssp             H----CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             c----CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC
Confidence            4    2334456665553     222334455689999999999

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=4.9e-24  Score=185.19  Aligned_cols=166  Identities=15%  Similarity=0.053  Sum_probs=121.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHh--hhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~  157 (250)
                      ++|+||||||+||||++++++|+++|++|++++|++++.+  .+.+.....+++++.+|++|.+++++++-+ ++|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            5689999999999999999999999999999999876432  111111134688899999999998876322 5899999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEccCccccc-------CCCCcchhhHHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~~~  228 (250)
                      |||..... ...++....+++|+.|+.++++++. .+. ++||++||.++|+.       +..+..+.+.|+  .+|..+
T Consensus        82 ~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~--~sK~~~  158 (345)
T 2z1m_A           82 LAAQSFVG-VSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA--VAKLFG  158 (345)
T ss_dssp             CCCCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHH
T ss_pred             CCCCcchh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH--HHHHHH
Confidence            99975421 1122334566899999999999884 465 89999999998863       223444556666  556666


Q ss_pred             HHHHH----hcCCCEEEEecceEEe
Q 025619          229 EDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       229 e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      |.+++    +.+++++++||..+++
T Consensus       159 e~~~~~~~~~~~~~~~~~r~~~~~g  183 (345)
T 2z1m_A          159 HWITVNYREAYNMFACSGILFNHES  183 (345)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHhCCceEeeeeeeecC
Confidence            65543    4589998888877664

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.90  E-value=1.6e-24  Score=188.48  Aligned_cols=163  Identities=18%  Similarity=0.176  Sum_probs=117.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc--------CCCCCeeEEEeeCCCccCcchhh----h
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK--------QDEETLQVCKGDTRNPKDLDPAI----F  149 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~--------~~~~~~~~v~~Dl~d~~~~~~~~----~  149 (250)
                      +|+||||||+||||++++++|+++|++|++++|+.++.+...+.        ....++.++.+|++|.+++++++    .
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            57999999999999999999999999998888765443332111        11356889999999999888654    2


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..++..    ......|+.
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~----~~~~~~Y~a  157 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG----LPFNDVYCA  157 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC----CTTCHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC----CCCChHHHH
Confidence            46999999999764221   111122345689999999999875     246789999999988742    233456665


Q ss_pred             HHHH-----HHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKYK-----KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~k-----~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|..     +.+..++...||++++|+||+|.
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~  189 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVH  189 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence            5431     12234455689999999999885

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=5.6e-25  Score=182.51  Aligned_cols=155  Identities=14%  Similarity=0.093  Sum_probs=114.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------h--CCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F--EGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~--~~~  152 (250)
                      ++|++|||||+||||++++++|+++|++|++++|++++.+        ....++.+|++|.+++++++      +  +++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            5789999999999999999999999999999999876532        13467789999998887654      3  689


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      |+||||||.......    ..+..+..+++|+.|+.++++++.+   ..++||++||..++.    +.+....|+.+  |
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~s--K  147 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----PTPSMIGYGMA--K  147 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHHH--H
T ss_pred             CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----CCCCcHHHHHH--H
Confidence            999999997642111    1111234558899999999887621   236999999998873    33444566644  4


Q ss_pred             HHHHHH-------HH--hcCCCEEEEecceEEe
Q 025619          226 KMGEDF-------VQ--KSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~-------~~--~~gi~~~~vrPg~v~~  249 (250)
                      .+++.+       +.  ..||++++|+||++.+
T Consensus       148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t  180 (236)
T 1ooe_A          148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT  180 (236)
T ss_dssp             HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEecCcccC
Confidence            444432       23  5679999999998753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.89  E-value=1.5e-23  Score=177.98  Aligned_cols=142  Identities=23%  Similarity=0.348  Sum_probs=118.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+||||||+|+||++++++|+++  |++|++++|++++.+.+.    ..+++++.+|++|.+++.++ +.++|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPESLQKA-FAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----HTTCEEEECCTTCHHHHHHH-TTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----hcCCeEEEeccCCHHHHHHH-HhcCCEEEEcCC
Confidence            47999999999999999999999  999999999987665443    24678999999999999875 788999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCE
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPF  239 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~  239 (250)
                      ...       .    .++|+.++.+++++++ .++++||++||.+++..   +    ..  |..+|..+|+++++.|+++
T Consensus        76 ~~~-------~----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---~----~~--y~~~K~~~E~~~~~~~~~~  135 (287)
T 2jl1_A           76 PHY-------D----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---I----IP--LAHVHLATEYAIRTTNIPY  135 (287)
T ss_dssp             CCS-------C----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---C----ST--HHHHHHHHHHHHHHTTCCE
T ss_pred             CCc-------C----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---C----Cc--hHHHHHHHHHHHHHcCCCe
Confidence            521       0    1679999999999884 67899999999888631   1    13  4577889999999999999


Q ss_pred             EEEecceEEe
Q 025619          240 TIISLCIYCI  249 (250)
Q Consensus       240 ~~vrPg~v~~  249 (250)
                      +++|||++++
T Consensus       136 ~ilrp~~~~~  145 (287)
T 2jl1_A          136 TFLRNALYTD  145 (287)
T ss_dssp             EEEEECCBHH
T ss_pred             EEEECCEecc
Confidence            9999998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.89  E-value=1.8e-24  Score=180.13  Aligned_cols=155  Identities=15%  Similarity=0.079  Sum_probs=114.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------h--CC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F--EG  151 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~--~~  151 (250)
                      .++|++|||||+||||++++++|+++|++|++++|++++.+        ....++.+|++|++++++++      +  ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999999999999876532        13567789999999888654      3  58


Q ss_pred             CcEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          152 VTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +|+||||||.......    ..+..+..+++|+.|+.++++++.+   ..++||++||..++.    +.+....|+.  +
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~a--s  150 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----GTPGMIGYGM--A  150 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHH--H
T ss_pred             CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc----CCCCchHHHH--H
Confidence            9999999997642111    0111234557899999999887621   237999999998874    2333455654  4


Q ss_pred             HHHHHHH-------HH--hcCCCEEEEecceEE
Q 025619          225 KKMGEDF-------VQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~-------~~--~~gi~~~~vrPg~v~  248 (250)
                      |.+++.+       +.  ..||++++|+||++-
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~  183 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD  183 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEE
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCccc
Confidence            5544433       23  568999999999874

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.89  E-value=4e-24  Score=179.18  Aligned_cols=151  Identities=12%  Similarity=0.115  Sum_probs=111.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h-CCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F-EGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~-~~~D~vi~~  158 (250)
                      ||++|||||+||||++++++|+++|++|++++|++++.+.          . +.+|++|.+++++++  + +++|+||||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            4789999999999999999999999999999998765431          1 568999998888653  3 678999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCC-----------------------
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNE-----------------------  210 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~-----------------------  210 (250)
                      ||.... .   .+.+..+++|+.|+.++++++     +.+.++||++||..++....                       
T Consensus        70 Ag~~~~-~---~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           70 AGLGPQ-T---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCCCTT-C---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCCCC-c---ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence            997641 1   123556789999999999876     34568999999998873100                       


Q ss_pred             -CCcchhhHHHHHHHHHHHH-------HHHHhcCCCEEEEecceEEe
Q 025619          211 -LPWSIMNLFGVLKYKKMGE-------DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       211 -~~~~~~~~y~~~k~k~~~e-------~~~~~~gi~~~~vrPg~v~~  249 (250)
                       .+..+...|+.+  |.+++       .++...||++++|+||++.+
T Consensus       146 ~~~~~~~~~Y~~s--K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  190 (257)
T 1fjh_A          146 AGEQGGNLAYAGS--KNALTVAVRKRAAAWGEAGVRLNTIAPGATET  190 (257)
T ss_dssp             CCTTHHHHHHHHH--HHHHHHHHHHTHHHHHHTTCEEEEEEECC---
T ss_pred             ccCCCCccHHHHH--HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCC
Confidence             122344556544  44444       33445799999999999854

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=5.4e-24  Score=178.14  Aligned_cols=166  Identities=13%  Similarity=0.040  Sum_probs=120.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||+||||++++++|+++|++|+++ .|+.++.++..+++.  ..++.++.+|++|.+++++++      +
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999886 666666555443321  456788999999998887643      1


Q ss_pred             ------CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhh
Q 025619          150 ------EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       150 ------~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                            +++|+||||||.......   ..+..+..+++|+.|+.++++++.+   +.++||++||..++.    +.+...
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~----~~~~~~  159 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----SLPDFI  159 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS----CCTTBH
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc----CCCCcc
Confidence                  249999999998643211   1111233557899999999998742   346899999998874    334456


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++...||++++|+||++.
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  195 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVK  195 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeec
Confidence            6665554     122334455679999999999985

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.89  E-value=6.3e-24  Score=178.97  Aligned_cols=126  Identities=18%  Similarity=0.228  Sum_probs=97.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++|+||||||+||||++++++|++ +|++|++++|+.++.++..+++.  ..++.++.+|++|.+++++++      +++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999999999 99999999999877665443321  346889999999999888653      358


Q ss_pred             CcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCccc
Q 025619          152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT  206 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~  206 (250)
                      +|+||||||........   .+..+..+++|+.|+.++++++.+   ..++||++||..++
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~  143 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  143 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence            99999999986532111   011233568899999999998732   23699999998776

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.89  E-value=2.9e-24  Score=179.97  Aligned_cols=154  Identities=16%  Similarity=0.085  Sum_probs=113.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +.++|+||||||+||||++++++|+++|++|++++|+.++.+.          ..+.+|++|.+++++++      ++++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~----------~~~~~d~~d~~~v~~~~~~~~~~~g~i   88 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD----------HSFTIKDSGEEEIKSVIEKINSKSIKV   88 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS----------EEEECSCSSHHHHHHHHHHHHTTTCCE
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc----------cceEEEeCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999999765331          35788999999888654      4689


Q ss_pred             cEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       153 D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      |+||||||......    ..++.....+++|+.|+.++++++.+   ..++||++||..++.    +......|+.  +|
T Consensus        89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~--sK  162 (251)
T 3orf_A           89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN----RTSGMIAYGA--TK  162 (251)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHH--HH
T ss_pred             CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc----CCCCCchhHH--HH
Confidence            99999999864221    11122234568899999999987721   236999999998873    3344456664  45


Q ss_pred             HHHHHHH-------H--hcCCCEEEEecceEE
Q 025619          226 KMGEDFV-------Q--KSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e~~~-------~--~~gi~~~~vrPg~v~  248 (250)
                      .+++.+.       .  ..||++++|+||+|.
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~  194 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLD  194 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBC
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCc
Confidence            4444332       1  468999999999885

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.89  E-value=5e-24  Score=184.83  Aligned_cols=164  Identities=13%  Similarity=0.069  Sum_probs=115.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEe---------cChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL---------RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~---------R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|++|||||+||||++++++|+++|++|++++         |+.++.+++.+++..... ...+|++|.+++++++ 
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHH
Confidence            57889999999999999999999999999999974         455655554333221111 2458999998876543 


Q ss_pred             -----hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||......   ...+..+..+++|+.|+.++++++     +.+.++||++||..+...    ...
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~----~~~  160 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG----NFG  160 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----CTT
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC----CCC
Confidence                 568999999999865321   111122345689999999998876     245689999999876532    123


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      ...|+.+|.     .+.+..++...||++++|+||++
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence            456665544     12223445567999999999986

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.89  E-value=2.7e-24  Score=184.22  Aligned_cols=155  Identities=19%  Similarity=0.080  Sum_probs=113.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi  156 (250)
                      .+++|+||||||+|+||++++++|+++|+      +....         ...++.+.+|++|.+++.++ +.  ++|+||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------~~~~~~~~~D~~d~~~~~~~-~~~~~~d~Vi   66 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------WVFVSSKDADLTDTAQTRAL-FEKVQPTHVI   66 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------EEECCTTTCCTTSHHHHHHH-HHHSCCSEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------ccccCceecccCCHHHHHHH-HhhcCCCEEE
Confidence            46788999999999999999999999998      11110         11344457899999999876 44  499999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC-Ccchh---------hHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL-PWSIM---------NLFGVLKYK  225 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~-~~~~~---------~~y~~~k~k  225 (250)
                      |+|+........+.++...+++|+.|+.+++++++ .++++||++||.++|+.... +..+.         ..++|..+|
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  146 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAK  146 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHH
Confidence            99998542112233444567899999999999984 67899999999999874321 22111         112355677


Q ss_pred             HHHHHHHH----hcCCCEEEEecceEEe
Q 025619          226 KMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      ..+|++++    +.|++++++||+.+||
T Consensus       147 ~~~E~~~~~~~~~~~~~~~ilRp~~v~G  174 (319)
T 4b8w_A          147 RMIDVQNRAYFQQYGCTFTAVIPTNVFG  174 (319)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHHhhCCCEEEEeeccccC
Confidence            77776553    4799999999999997

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.89  E-value=1.2e-23  Score=175.43  Aligned_cols=156  Identities=10%  Similarity=0.021  Sum_probs=112.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--cChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-L--RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~--R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +|++|||||+||||++++++|+++|++|+++ +  |++++++++.+++  .+     +|+.|.+++++++      ++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-----~~~~~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-----TIALAEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-----EEECCCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-----CcccCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999999999999 6  9998877765443  12     2344666666543      4689


Q ss_pred             cEEEEcCcCCCc---CC-C--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          153 THVICCTGTTAF---PS-R--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~---~~-~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      |+||||||....   .. .  +.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----~~~~~~~Y~a  149 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK----PLAYNPLYGP  149 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----CCTTCTTHHH
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC----CCCCchHHHH
Confidence            999999997643   11 1  11112345688999999998876     34578999999998874    2333456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       150 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  181 (244)
T 1zmo_A          150 ARAATVALVESAAKTLSRDGILLYAIGPNFFN  181 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            543     222234455679999999999874

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=1.5e-23  Score=183.72  Aligned_cols=159  Identities=11%  Similarity=0.083  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-----CC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-----~~  152 (250)
                      .+++|+||||||+|+||++++++|+++| ++|++++|+.+... .. .+  .++. +.+|++|.+.++++ +.     ++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~--~~~~-~~~d~~~~~~~~~~-~~~~~~~~~  116 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NL--VDLN-IADYMDKEDFLIQI-MAGEEFGDV  116 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GT--TTSC-CSEEEEHHHHHHHH-HTTCCCSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cc--cCce-EeeecCcHHHHHHH-HhhcccCCC
Confidence            3567899999999999999999999999 99999999865421 11 11  1233 67899998888765 33     69


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC-------CcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL-------PWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~-------~~~~~~~y~~~k~  224 (250)
                      |+|||+||....   ...+....+++|+.|+.+++++++ .++ +||++||.++++....       +..+.+.|+  .+
T Consensus       117 d~Vih~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~s  190 (357)
T 2x6t_A          117 EAIFHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFG--YS  190 (357)
T ss_dssp             CEEEECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHH--HH
T ss_pred             CEEEECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhH--HH
Confidence            999999997642   122334566899999999999885 577 9999999998864321       122344555  56


Q ss_pred             HHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          225 KKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       225 k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      |..+|.+++    +.|++++++||+.|||
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G  219 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNVYG  219 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEES
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeEEC
Confidence            666766553    4589999999999996

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.89  E-value=4.1e-24  Score=179.35  Aligned_cols=156  Identities=11%  Similarity=0.028  Sum_probs=109.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      ||++|||||+||||++++++|+++|++|++++|++++.+.+.+ +.  ..++..+     |.+++++++      ++++|
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999999877655432 21  2233333     555555432      56899


Q ss_pred             EEEEcCcCC-CcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          154 HVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       154 ~vi~~Ag~~-~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +||||||.. ....   .+.++.+..+++|+.|+.++++++     +.+.++||++||..++.    +.+....|+.+|.
T Consensus        75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~Y~~sK~  150 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----PWKELSTYTSARA  150 (254)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----CCTTCHHHHHHHH
T ss_pred             EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc----CCCCchHHHHHHH
Confidence            999999986 3211   111122345688999999998876     34668999999998874    2334456665543


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                           .+.+..++...||++++|+||+|
T Consensus       151 a~~~~~~~la~e~~~~gi~v~~v~PG~v  178 (254)
T 1zmt_A          151 GACTLANALSKELGEYNIPVFAIGPNYL  178 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence                 12223445567999999999998

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.89  E-value=7.3e-23  Score=174.20  Aligned_cols=143  Identities=19%  Similarity=0.293  Sum_probs=116.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      |+||||||||+||++++++|+++ |++|++++|++++.+.+.    ..+++++.+|++|+++++++ ++++|+|||+|+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~~~v~~~~~D~~d~~~l~~~-~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW----RGKVSVRQLDYFNQESMVEA-FKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG----BTTBEEEECCTTCHHHHHHH-TTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh----hCCCEEEEcCCCCHHHHHHH-HhCCCEEEEeCCC
Confidence            36999999999999999999998 999999999988765543    45789999999999999975 7899999999986


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEE
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~  240 (250)
                      ..           ....|+.++.+++++++ .++++||++||.+....  .++      ...+....+|..+++.|++++
T Consensus        76 ~~-----------~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~--~~~------~~~~~~~~~e~~~~~~g~~~~  136 (289)
T 3e48_A           76 IH-----------PSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHN--NPF------HMSPYFGYASRLLSTSGIDYT  136 (289)
T ss_dssp             CC-----------SHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTT--CCS------TTHHHHHHHHHHHHHHCCEEE
T ss_pred             Cc-----------cchhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCC--CCC------ccchhHHHHHHHHHHcCCCEE
Confidence            43           12458999999999884 68899999999654321  222      233444567788888999999


Q ss_pred             EEecceEEe
Q 025619          241 IISLCIYCI  249 (250)
Q Consensus       241 ~vrPg~v~~  249 (250)
                      ++|||++++
T Consensus       137 ilrp~~~~~  145 (289)
T 3e48_A          137 YVRMAMYMD  145 (289)
T ss_dssp             EEEECEEST
T ss_pred             EEecccccc
Confidence            999999875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.89  E-value=1.9e-22  Score=171.23  Aligned_cols=142  Identities=16%  Similarity=0.192  Sum_probs=113.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+|+|||||| |+||++++++|+++|++|++++|++++.+.+.    ..+++++.+|++|.+      +.++|+|||+|+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~------~~~~d~vi~~a~   72 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----ASGAEPLLWPGEEPS------LDGVTHLLISTA   72 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----HTTEEEEESSSSCCC------CTTCCEEEECCC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----hCCCeEEEecccccc------cCCCCEEEECCC
Confidence            4579999998 99999999999999999999999988766554    247899999999844      478999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGED  230 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~  230 (250)
                      .....              ...+.+++++++   .++++||++||.++|+..       +.+..+.+.|+  .+|..+|+
T Consensus        73 ~~~~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~  136 (286)
T 3ius_A           73 PDSGG--------------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG--RWRVMAEQ  136 (286)
T ss_dssp             CBTTB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH--HHHHHHHH
T ss_pred             ccccc--------------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH--HHHHHHHH
Confidence            65311              023567777773   578999999999998742       23344455555  77888999


Q ss_pred             HHHhc-CCCEEEEecceEEe
Q 025619          231 FVQKS-GLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~~~~-gi~~~~vrPg~v~~  249 (250)
                      .++.. |++++++||+++||
T Consensus       137 ~~~~~~~~~~~ilRp~~v~G  156 (286)
T 3ius_A          137 QWQAVPNLPLHVFRLAGIYG  156 (286)
T ss_dssp             HHHHSTTCCEEEEEECEEEB
T ss_pred             HHHhhcCCCEEEEeccceEC
Confidence            99887 99999999999997

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=4.2e-23  Score=171.10  Aligned_cols=155  Identities=17%  Similarity=0.139  Sum_probs=113.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~v  155 (250)
                      ++|++|||||+||||++++++|+++|++|++++|+++ .         .++.++.+|++|++++++++     ++++|+|
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            3689999999999999999999999999999999875 2         13578999999999988653     2489999


Q ss_pred             EEcCcCCCcCCCCC---C----CCCCcceehHHHHHHHHHHcc----C-C---C---CeEEEEccCcccccCCCCcchhh
Q 025619          156 ICCTGTTAFPSRRW---D----GDNTPEKVDWEGVRNLVSALP----S-S---L---KRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       156 i~~Ag~~~~~~~~~---~----~~~~~~~~N~~g~~~l~~a~~----~-~---~---~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                      |||||.........   +    +.+..+++|+.|+.++++++.    + +   .   ++||++||..++.+    ..+..
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----~~~~~  146 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG----QIGQA  146 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----CTTCH
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----CCCCc
Confidence            99999865321111   0    223345789999999998762    1 2   2   39999999988743    23345


Q ss_pred             HHHHHHHH-----HHHHHHHHhcCCCEEEEecceEEe
Q 025619          218 LFGVLKYK-----KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       218 ~y~~~k~k-----~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      .|+.+|..     +.+..+++..||++++|+||++++
T Consensus       147 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  183 (242)
T 1uay_A          147 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT  183 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcc
Confidence            66655431     122234455799999999999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=2.3e-23  Score=183.71  Aligned_cols=165  Identities=18%  Similarity=0.134  Sum_probs=120.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcC---CCCCeeEEEeeCCCccCcchhhhC-CC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE-GV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~-~~  152 (250)
                      +|+||||||+|+||++++++|+++|++|++++|+++.     ++.+.+..   ...+++++.+|++|.+++.+++-+ ++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            3789999999999999999999999999999998653     22221111   134688999999999998875322 58


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC---CeEEEEccCcccccC-------CCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL---KRIVLVSSVGVTKFN-------ELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~---~~iV~iSS~~~~~~~-------~~~~~~~~~y~~  221 (250)
                      |+||||||..... ..+.+....+++|+.|+.+++++++ .++   ++||++||.++++..       +.+..+.+.|+ 
T Consensus       104 d~vih~A~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~-  181 (375)
T 1t2a_A          104 TEIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG-  181 (375)
T ss_dssp             SEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH-
T ss_pred             CEEEECCCccccc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhH-
Confidence            9999999975421 1112334456899999999999884 455   799999999998632       22334455666 


Q ss_pred             HHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          222 LKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                       .+|.++|.+++    +.|++++++||+.+||
T Consensus       182 -~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~g  212 (375)
T 1t2a_A          182 -AAKLYAYWIVVNFREAYNLFAVNGILFNHES  212 (375)
T ss_dssp             -HHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             -HHHHHHHHHHHHHHHHhCCCEEEEecccccC
Confidence             55666665553    4599999999998876

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.89  E-value=9.3e-24  Score=176.07  Aligned_cols=151  Identities=13%  Similarity=0.150  Sum_probs=112.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh---CCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~~D~vi~~  158 (250)
                      ||+||||||+||||++++++|+++|++|++++|++++.+.           .+.+|++|.+++++++-   +++|+||||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence            4689999999999999999999999999999998765321           15689999888886532   589999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCC---------------------
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELP---------------------  212 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~---------------------  212 (250)
                      ||....    ..+....+++|+.|+.++++++     +.+.++||++||..++......                     
T Consensus        70 Ag~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           70 AGVGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCCCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence            997641    1233456789999999999976     2356899999999988532100                     


Q ss_pred             -cchhhHHHHHHHHHHHHHHH-------HhcCCCEEEEecceEEe
Q 025619          213 -WSIMNLFGVLKYKKMGEDFV-------QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       213 -~~~~~~y~~~k~k~~~e~~~-------~~~gi~~~~vrPg~v~~  249 (250)
                       ..+...|+  .+|.+++.+.       ...|++++++|||++++
T Consensus       146 ~~~~~~~Y~--~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~  188 (255)
T 2dkn_A          146 QGQTHLAYA--GSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVET  188 (255)
T ss_dssp             HCCHHHHHH--HHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCS
T ss_pred             cCCcchhHH--HHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccc
Confidence             02334555  4555555333       34699999999999875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.88  E-value=1.7e-23  Score=180.48  Aligned_cols=148  Identities=11%  Similarity=0.062  Sum_probs=113.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~  158 (250)
                      ++|+||||||+|+||++++++|+++|++|++++|+.                  .+|++|.++++++ +.  ++|+|||+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~-~~~~~~d~vih~   62 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDF-FASERIDQVYLA   62 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHH-HHHHCCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHH-HHhcCCCEEEEc
Confidence            457899999999999999999999999999988752                  2699999888875 56  89999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-C----------Ccchh-hHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-L----------PWSIM-NLFGVLKYK  225 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-~----------~~~~~-~~y~~~k~k  225 (250)
                      ||..........+....+++|+.++.+++++++ .++++||++||..+|+... .          +..+. +.|+  .+|
T Consensus        63 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~--~sK  140 (321)
T 1e6u_A           63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA--IAK  140 (321)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH--HHH
T ss_pred             CeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH--HHH
Confidence            997531100111234456889999999999884 5788999999999986421 1          12222 3555  667


Q ss_pred             HHHHHHHHh----cCCCEEEEecceEEe
Q 025619          226 KMGEDFVQK----SGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~~~----~gi~~~~vrPg~v~~  249 (250)
                      ..+|++++.    .|++++++||+++||
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G  168 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPTNLYG  168 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEES
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeCCcCC
Confidence            777766644    599999999999997

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.88  E-value=1.6e-23  Score=182.00  Aligned_cols=163  Identities=21%  Similarity=0.219  Sum_probs=117.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh----hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~----~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~  157 (250)
                      |+||||||+||||++++++|+++|++|++++|...    ..+.+.+. ...+++++.+|++|++++++++-+ ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH-HTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh-cCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            37999999999999999999999999999987432    12221110 124578899999999988875322 6999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcch-hhHHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSI-MNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~-~~~y~~~k~k~~~  228 (250)
                      |||...... ..+.....+++|+.|+.+++++++ .++++||++||.++++..       +.+..+ ...|+  .+|.++
T Consensus        80 ~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~--~sK~~~  156 (338)
T 1udb_A           80 FAGLKAVGE-SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYG--KSKLMV  156 (338)
T ss_dssp             CCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH--HHHHHH
T ss_pred             CCccCcccc-chhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHH--HHHHHH
Confidence            999753211 111223456899999999999884 578899999999888632       122212 44555  566666


Q ss_pred             HHHHHh----c-CCCEEEEecceEEe
Q 025619          229 EDFVQK----S-GLPFTIISLCIYCI  249 (250)
Q Consensus       229 e~~~~~----~-gi~~~~vrPg~v~~  249 (250)
                      |.+++.    . |++++++||+.+||
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v~G  182 (338)
T 1udb_A          157 EQILTDLQKAQPDWSIALLRYFNPVG  182 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEEEC
T ss_pred             HHHHHHHHHhcCCCceEEEeeceecC
Confidence            665533    3 79999999999886

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=1.5e-23  Score=176.72  Aligned_cols=165  Identities=15%  Similarity=0.068  Sum_probs=118.9

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcC---CCCCeeEEEeeCCCccCcchhh----
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ---DEETLQVCKGDTRNPKDLDPAI----  148 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~----  148 (250)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.++. ++..+++   ...++.++++|++|.+++++++    
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV   96 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence            5788999999999  9999999999999999999998875433 2222111   1457888999999999988654    


Q ss_pred             --hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 --FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                        ++++|+||||||.......   ..+..+..+++|+.|+.++++++     +.+.++||++||..++....  ......
T Consensus        97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~~~  174 (267)
T 3gdg_A           97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF--PQEQTS  174 (267)
T ss_dssp             HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS--SSCCHH
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC--CCCCCc
Confidence              5689999999998753221   11122345688999999999876     24668999999988764321  123455


Q ss_pred             HHHHHHHHHHHH-------HHHhcCCCEEEEecceEE
Q 025619          219 FGVLKYKKMGED-------FVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~k~~~e~-------~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|  .+++.       ++... |++++|+||++.
T Consensus       175 Y~~sK--~a~~~~~~~la~e~~~~-i~v~~v~PG~v~  208 (267)
T 3gdg_A          175 YNVAK--AGCIHMARSLANEWRDF-ARVNSISPGYID  208 (267)
T ss_dssp             HHHHH--HHHHHHHHHHHHHTTTT-CEEEEEEECCEE
T ss_pred             chHHH--HHHHHHHHHHHHHhccC-cEEEEEECCccc
Confidence            66544  43332       23334 999999999985

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.88  E-value=1.1e-22  Score=178.88  Aligned_cols=165  Identities=16%  Similarity=0.147  Sum_probs=116.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-----hhhhCcC--CCCCeeEEEeeCCCccCcchhhhC-CCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-----TTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-GVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-----~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~-~~D  153 (250)
                      ||+||||||+||||++++++|+++|++|++++|+.++.     +.+.+..  ...+++++.+|++|.+++++++-+ ++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999986542     1111110  124688899999999998875322 589


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC---CeEEEEccCcccccC-------CCCcchhhHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL---KRIVLVSSVGVTKFN-------ELPWSIMNLFGVL  222 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~---~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~  222 (250)
                      +||||||.... ...+++....+++|+.|+.+++++++ .++   ++||++||.++++..       +.+..+.+.|+  
T Consensus        81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~--  157 (372)
T 1db3_A           81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA--  157 (372)
T ss_dssp             EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHH--
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHH--
Confidence            99999997642 22223333455889999999999884 455   799999999888642       22334455666  


Q ss_pred             HHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      .+|.++|.+++    +.|++++++||..+||
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~g  188 (372)
T 1db3_A          158 VAKLYAYWITVNYRESYGMYACNGILFNHES  188 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEECCccC
Confidence            55666665543    4699999999988775

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.88  E-value=1.7e-23  Score=172.21  Aligned_cols=146  Identities=16%  Similarity=0.114  Sum_probs=107.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      ++++|++|||||+||||++++++|+++|++|++++|+.+                  +|++|++++++++  ++++|+||
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            457899999999999999999999999999999998754                  7999999988754  46899999


Q ss_pred             EcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHH
Q 025619          157 CCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       157 ~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e  229 (250)
                      ||||.......    ..+..+..+++|+.|+.++++++.+   ..++||++||..++.    +.+....|+.+  |..++
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~~~Y~as--K~a~~  138 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK----VVANTYVKAAI--NAAIE  138 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----CCTTCHHHHHH--HHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----CCCCchHHHHH--HHHHH
Confidence            99997632111    1111233568899999999998732   236899999998874    33444566644  44443


Q ss_pred             HHH----Hhc-CCCEEEEecceEE
Q 025619          230 DFV----QKS-GLPFTIISLCIYC  248 (250)
Q Consensus       230 ~~~----~~~-gi~~~~vrPg~v~  248 (250)
                      .+.    ++. .|++++|+||++.
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v~  162 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLTK  162 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSBC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCc
Confidence            222    222 2999999999885

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.88  E-value=2.2e-23  Score=181.38  Aligned_cols=163  Identities=17%  Similarity=0.162  Sum_probs=121.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCC-------CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G-------~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~  151 (250)
                      .+++|+||||||+||||++++++|+++|       ++|++++|+.++...    ....+++++.+|++|.+++++++-++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~   86 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVEAR   86 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHhcC
Confidence            4678899999999999999999999999       899999998654322    11346888999999999988753258


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-----CCeEEEEccCcccccC-------CCCcchhhH
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-----LKRIVLVSSVGVTKFN-------ELPWSIMNL  218 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-----~~~iV~iSS~~~~~~~-------~~~~~~~~~  218 (250)
                      +|+||||||....  ...++....+++|+.|+.+++++++ .+     +++||++||.++++..       +.+..+...
T Consensus        87 ~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~  164 (342)
T 2hrz_A           87 PDVIFHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTS  164 (342)
T ss_dssp             CSEEEECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSH
T ss_pred             CCEEEECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcch
Confidence            9999999997541  0111234456899999999999884 33     7899999999988642       122234456


Q ss_pred             HHHHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          219 FGVLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       219 y~~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      |+  .+|.++|.+++    +.+++++++|++.++|
T Consensus       165 Y~--~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g  197 (342)
T 2hrz_A          165 YG--TQKAICELLLSDYSRRGFFDGIGIRLPTICI  197 (342)
T ss_dssp             HH--HHHHHHHHHHHHHHHTTSCEEEEEEECEETT
T ss_pred             HH--HHHHHHHHHHHHHHHhcCCCceeEEeeeEEe
Confidence            65  55666666553    3478889999887764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.88  E-value=1.1e-22  Score=177.60  Aligned_cols=149  Identities=22%  Similarity=0.260  Sum_probs=115.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D  153 (250)
                      |.+|+||||||||+||++++++|+++|++|++++|++    ++.+.+. .+...+++++.+|++|.+++.++ +.  ++|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~l~~~~v~~~~~Dl~d~~~l~~~-~~~~~~d   85 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK-ALEDKGAIIVYGLINEQEAMEKI-LKEHEID   85 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHH-HHHTTCC
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHH-HHHhCCcEEEEeecCCHHHHHHH-HhhCCCC
Confidence            3457899999999999999999999999999999976    3333221 11135789999999999999976 67  999


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDF  231 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~  231 (250)
                      +|||+||.                .|+.++.+++++++ .+ +++||+ |+.+....+..+..+...|+  .+|..+|++
T Consensus        86 ~Vi~~a~~----------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~--~sK~~~e~~  146 (346)
T 3i6i_A           86 IVVSTVGG----------------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMY--REKRRVRQL  146 (346)
T ss_dssp             EEEECCCG----------------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHH--HHHHHHHHH
T ss_pred             EEEECCch----------------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHH--HHHHHHHHH
Confidence            99999985                27888999999985 57 889886 54433323334445555555  678889999


Q ss_pred             HHhcCCCEEEEecceEEe
Q 025619          232 VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~~~gi~~~~vrPg~v~~  249 (250)
                      +++.|++++++|||++++
T Consensus       147 l~~~g~~~tivrpg~~~g  164 (346)
T 3i6i_A          147 VEESGIPFTYICCNSIAS  164 (346)
T ss_dssp             HHHTTCCBEEEECCEESS
T ss_pred             HHHcCCCEEEEEeccccc
Confidence            999999999999999876

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.88  E-value=2.6e-23  Score=178.93  Aligned_cols=152  Identities=20%  Similarity=0.207  Sum_probs=116.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT  159 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~A  159 (250)
                      +||||||+|+||++++++|+++  |++|++++|+.++.+         +++++.+|++|.++++++ +.  ++|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~~~-~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEIDRA-VEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHHHH-HHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHHHH-HhhcCCcEEEECC
Confidence            4899999999999999999998  899999998754321         467889999999999875 44  899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC--------CCCcchhhHHHHHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN--------ELPWSIMNLFGVLKYKKMGED  230 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~--------~~~~~~~~~y~~~k~k~~~e~  230 (250)
                      |.....  ...+....+++|+.|+.+++++++ .++++||++||..+++..        +.+..+.+.|+  .+|.++|.
T Consensus        71 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~--~sK~~~e~  146 (317)
T 3ajr_A           71 GILSAK--GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFG--VTKIAAEL  146 (317)
T ss_dssp             CCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHH--HHHHHHHH
T ss_pred             cccCCc--cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHH--HHHHHHHH
Confidence            975321  111234466899999999999885 578899999999998642        12223456666  45555554


Q ss_pred             HH----HhcCCCEEEEecceEEe
Q 025619          231 FV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ++    ++.|++++++||+.+||
T Consensus       147 ~~~~~~~~~~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          147 LGQYYYEKFGLDVRSLRYPGIIS  169 (317)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEEC
T ss_pred             HHHHHHHhcCCeEEEEecCcEec
Confidence            44    45699999999998886

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.88  E-value=1.2e-23  Score=178.88  Aligned_cols=142  Identities=18%  Similarity=0.199  Sum_probs=115.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag~  161 (250)
                      +||||||+|+||++++++|+++|++|++++|.                   ++|++|.++++++ +.  ++|+|||+||.
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~~~-~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQQV-VQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHHHH-HHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHHHH-HHhcCCCEEEECCcc
Confidence            89999999999999999999999999999992                   2799999998876 44  79999999998


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      .... ..+.+....+++|+.|+.+++++++ .+. +||++||..+|+..       +.+..+.+.|+  .+|..+|++++
T Consensus        67 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~~  142 (287)
T 3sc6_A           67 TKVD-QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYG--ASKYAGEQFVK  142 (287)
T ss_dssp             CCHH-HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHH--HHHHHHHHHHH
T ss_pred             cChH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHH--HHHHHHHHHHH
Confidence            6521 1123445567899999999999985 455 79999999988642       23334455555  77888999999


Q ss_pred             hcCCCEEEEecceEEe
Q 025619          234 KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~~gi~~~~vrPg~v~~  249 (250)
                      ..+.+++++||+.+||
T Consensus       143 ~~~~~~~ilR~~~v~G  158 (287)
T 3sc6_A          143 ELHNKYFIVRTSWLYG  158 (287)
T ss_dssp             HHCSSEEEEEECSEEC
T ss_pred             HhCCCcEEEeeeeecC
Confidence            8888999999999997

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.88  E-value=3.3e-22  Score=183.46  Aligned_cols=160  Identities=18%  Similarity=0.217  Sum_probs=119.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh---hhC-----------cCCCCCeeEEEeeCCCccCcch
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFG-----------KQDEETLQVCKGDTRNPKDLDP  146 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~---~~~-----------~~~~~~~~~v~~Dl~d~~~~~~  146 (250)
                      .+|+||||||||+||++++++|+++|++|++++|+.++.+.   +.+           .....+++++.+|++|++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            45799999999999999999999999999999998763211   100           011458999999999999888 


Q ss_pred             hhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccccc------------CCCC--
Q 025619          147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF------------NELP--  212 (250)
Q Consensus       147 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~------------~~~~--  212 (250)
                      + ..++|+|||||+....    +.+....+++|+.|+.+++++++.+.++||++||.++ +.            +..+  
T Consensus       228 ~-~~~~D~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~  301 (508)
T 4f6l_B          228 L-PENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK  301 (508)
T ss_dssp             C-SSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS
T ss_pred             C-ccCCCEEEECCceecC----CCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccc
Confidence            3 6899999999997642    2244567789999999999998667899999999988 21            1111  


Q ss_pred             -cchhhHHHHHHHHHHHHHHHHh---cCCCEEEEecceEEe
Q 025619          213 -WSIMNLFGVLKYKKMGEDFVQK---SGLPFTIISLCIYCI  249 (250)
Q Consensus       213 -~~~~~~y~~~k~k~~~e~~~~~---~gi~~~~vrPg~v~~  249 (250)
                       ..+.+.|+  .+|..+|+.++.   .|++++++|||.|+|
T Consensus       302 ~~~~~~~Y~--~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G  340 (508)
T 4f6l_B          302 GQLLTSPYT--RSKFYSELKVLEAVNNGLDGRIVRVGNLTS  340 (508)
T ss_dssp             SBCCCSHHH--HHHHHHHHHHHHHHHTTCEEEEEEECCEES
T ss_pred             cccCCCcHH--HHHHHHHHHHHHHHHcCCCEEEEecceecc
Confidence             11334554  667777766654   799999999999987

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.88  E-value=1.8e-22  Score=172.63  Aligned_cols=150  Identities=23%  Similarity=0.298  Sum_probs=119.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHh--hhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +|+||||||||+||++++++|+++| ++|++++|++++..  .+.    ..+++++.+|++|+++++++ +.++|+|||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~   79 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----LQGAEVVQGDQDDQVIMELA-LNGAYATFIV   79 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----HTTCEEEECCTTCHHHHHHH-HTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----HCCCEEEEecCCCHHHHHHH-HhcCCEEEEe
Confidence            5799999999999999999999999 99999999976542  222    24688999999999999875 7899999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGL  237 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi  237 (250)
                      |+.....         ..+.|+.++.+++++++ .++++||++|+.+++......  +...|  ..+|..+|+++++.|+
T Consensus        80 a~~~~~~---------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~--~~~~y--~~sK~~~e~~~~~~gi  146 (299)
T 2wm3_A           80 TNYWESC---------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR--LAAAH--FDGKGEVEEYFRDIGV  146 (299)
T ss_dssp             CCHHHHT---------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTS--CCCHH--HHHHHHHHHHHHHHTC
T ss_pred             CCCCccc---------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCc--ccCch--hhHHHHHHHHHHHCCC
Confidence            9854210         13578899999999884 688999998877666422211  12334  4778889999999999


Q ss_pred             CEEEEecceEEe
Q 025619          238 PFTIISLCIYCI  249 (250)
Q Consensus       238 ~~~~vrPg~v~~  249 (250)
                      +++++|||++++
T Consensus       147 ~~~ilrp~~~~~  158 (299)
T 2wm3_A          147 PMTSVRLPCYFE  158 (299)
T ss_dssp             CEEEEECCEEGG
T ss_pred             CEEEEeecHHhh
Confidence            999999999875

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.87  E-value=9.7e-23  Score=164.73  Aligned_cols=144  Identities=17%  Similarity=0.149  Sum_probs=107.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~Ag~  161 (250)
                      +++||||+||||++++++|+ +|++|++++|+++               .+.+|++|++++++++  ++++|+||||||.
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~   68 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS   68 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            79999999999999999999 9999999999863               3679999999988754  3469999999997


Q ss_pred             CCcCCCC---CCCCCCcceehHHHHHHHHHHccCC---CCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHH--
Q 025619          162 TAFPSRR---WDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ--  233 (250)
Q Consensus       162 ~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~~~~---~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~--  233 (250)
                      .......   .+.....+++|+.|+.++++++.+.   .++||++||..++.    +..+...|+  .+|..++.+.+  
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----~~~~~~~Y~--~sK~~~~~~~~~~  142 (202)
T 3d7l_A           69 ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----PIVQGASAA--MANGAVTAFAKSA  142 (202)
T ss_dssp             CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----CCTTCHHHH--HHHHHHHHHHHHH
T ss_pred             CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----CCCccHHHH--HHHHHHHHHHHHH
Confidence            6422111   1111234578999999999987431   37999999988763    333445665  45555554443  


Q ss_pred             ----hcCCCEEEEecceEEe
Q 025619          234 ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ----~~gi~~~~vrPg~v~~  249 (250)
                          ..|+++++++||++++
T Consensus       143 ~~e~~~gi~v~~v~pg~v~~  162 (202)
T 3d7l_A          143 AIEMPRGIRINTVSPNVLEE  162 (202)
T ss_dssp             TTSCSTTCEEEEEEECCBGG
T ss_pred             HHHccCCeEEEEEecCccCC
Confidence                2489999999999864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.87  E-value=1.1e-22  Score=172.43  Aligned_cols=138  Identities=21%  Similarity=0.343  Sum_probs=110.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +||||||+|+||++++++|+++  |++|++++|++++.+.+.    ..+++++.+|++|+++++++ +.++|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~-~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEAALTSA-LQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HTTCEEEECCTTCHHHHHHH-TTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cCCCeEEEcCCCCHHHHHHH-HhCCCEEEEeCCC
Confidence            4899999999999999999999  999999999987655443    23678999999999999875 7899999999985


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEE
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~  240 (250)
                      ..             +.|+.++.+++++++ .++++||++||.+++.   .+    ..|  ..+|..+|+++++.|++++
T Consensus        76 ~~-------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---~~----~~y--~~sK~~~e~~~~~~~~~~~  133 (286)
T 2zcu_A           76 EV-------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT---SP----LGL--ADEHIETEKMLADSGIVYT  133 (286)
T ss_dssp             -------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---CC----STT--HHHHHHHHHHHHHHCSEEE
T ss_pred             Cc-------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---Cc----chh--HHHHHHHHHHHHHcCCCeE
Confidence            21             247889999999885 5889999999998872   11    234  4678889999999999999


Q ss_pred             EEecceEE
Q 025619          241 IISLCIYC  248 (250)
Q Consensus       241 ~vrPg~v~  248 (250)
                      ++|||+++
T Consensus       134 ilrp~~~~  141 (286)
T 2zcu_A          134 LLRNGWYS  141 (286)
T ss_dssp             EEEECCBH
T ss_pred             EEeChHHh
Confidence            99999764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.87  E-value=3e-23  Score=177.14  Aligned_cols=146  Identities=20%  Similarity=0.129  Sum_probs=115.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag  160 (250)
                      |+||||||+|+||++++++|+ +|++|++++|+++               .+.+|++|.++++++ +.  ++|+|||+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~-~~~~~~d~vih~a~   63 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAET-VRKLRPDVIVNAAA   63 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHH-HHhcCCCEEEECcc
Confidence            379999999999999999999 8999999999751               246899999988875 44  4999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccC-CCCeEEEEccCcccccCC-------CCcchhhHHHHHHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~k~~~e~~~  232 (250)
                      ..... ..+.+....+++|+.|+.+++++++. +. +||++||..+|+...       .+..+.+.|+  .+|.++|+++
T Consensus        64 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~~~  139 (299)
T 1n2s_A           64 HTAVD-KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYG--KTKLAGEKAL  139 (299)
T ss_dssp             CCCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH--HHHHHHHHHH
T ss_pred             cCCHh-hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHH--HHHHHHHHHH
Confidence            75421 11223345668999999999999864 54 899999999886422       2333445555  7788899999


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      +..+.+++++||+++||
T Consensus       140 ~~~~~~~~ilRp~~v~G  156 (299)
T 1n2s_A          140 QDNCPKHLIFRTSWVYA  156 (299)
T ss_dssp             HHHCSSEEEEEECSEEC
T ss_pred             HHhCCCeEEEeeeeecC
Confidence            88888999999999997

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.87  E-value=4.1e-23  Score=196.19  Aligned_cols=166  Identities=21%  Similarity=0.214  Sum_probs=122.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH----hhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~----~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~  152 (250)
                      .+++|+||||||+|+||++++++|+++|++|++++|+.+..    +.+.. ....+++++.+|++|.++++++ +.  ++
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~v~~v~~Dl~d~~~l~~~-~~~~~~   85 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEV-LTKHHIPFYEVDLCDRKGLEKV-FKEYKI   85 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHH-HHTSCCCEEECCTTCHHHHHHH-HHHSCC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhh-ccCCceEEEEcCCCCHHHHHHH-HHhCCC
Confidence            45778999999999999999999999999999999875432    11110 1134688899999999998875 45  89


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-----------CCCcchhhHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-----------ELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-----------~~~~~~~~~y~  220 (250)
                      |+|||+||...... ........+++|+.|+.+++++++ .++++||++||.++++..           ..+..+...|+
T Consensus        86 D~Vih~A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~  164 (699)
T 1z45_A           86 DSVIHFAGLKAVGE-STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG  164 (699)
T ss_dssp             CEEEECCSCCCHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred             CEEEECCcccCcCc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence            99999999764210 011223456899999999999884 578899999999888531           11223345555


Q ss_pred             HHHHHHHHHHHHHh------cCCCEEEEecceEEe
Q 025619          221 VLKYKKMGEDFVQK------SGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~~~~~------~gi~~~~vrPg~v~~  249 (250)
                        .+|.++|++++.      .|++++++||+.+||
T Consensus       165 --~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG  197 (699)
T 1z45_A          165 --HTKYAIENILNDLYNSDKKSWKFAILRYFNPIG  197 (699)
T ss_dssp             --HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             --HHHHHHHHHHHHHHHhccCCCcEEEEEeccccC
Confidence              667777766543      689999999999987

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=9.1e-23  Score=192.74  Aligned_cols=162  Identities=15%  Similarity=0.159  Sum_probs=122.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC-cchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~-~~~~~~~~~D~vi~  157 (250)
                      +++|+||||||+|+||++++++|+++ |++|++++|+.++.+.+.+   ..+++++.+|++|.++ ++++ +.++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~---~~~v~~v~~Dl~d~~~~~~~~-~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIEYH-VKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT---CTTEEEEECCTTTCHHHHHHH-HHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc---CCceEEEECCCCCcHHHHHHh-hcCCCEEEE
Confidence            46789999999999999999999998 8999999998776544322   4578899999999765 5544 678999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-CCc-------------chhhHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-LPW-------------SIMNLFGVL  222 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-~~~-------------~~~~~y~~~  222 (250)
                      +||...... ...+....+++|+.|+.+++++++ .+ ++||++||.++|+... .++             .+.+.|+  
T Consensus       389 ~Aa~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~--  464 (660)
T 1z7e_A          389 LVAIATPIE-YTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS--  464 (660)
T ss_dssp             CCCCCCTHH-HHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHH--
T ss_pred             CceecCccc-cccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcH--
Confidence            999764211 111234456889999999999885 45 8999999999886421 111             1223455  


Q ss_pred             HHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          223 KYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       223 k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .+|..+|.++    ++.|++++++|||.|||
T Consensus       465 ~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~G  495 (660)
T 1z7e_A          465 VSKQLLDRVIWAYGEKEGLQFTLFRPFNWMG  495 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECSEES
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEECCCcccC
Confidence            6677777665    34699999999999987

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.87  E-value=2.9e-23  Score=176.82  Aligned_cols=145  Identities=21%  Similarity=0.214  Sum_probs=114.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~  158 (250)
                      .-|+||||||+|+||++++++|+++|++|++++|+                   .+|++|.++++++ +.  ++|+|||+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~~~-~~~~~~d~vih~   70 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKF-FNEKKPNVVINC   70 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHHHH-HHHHCCSEEEEC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHHHH-HHhcCCCEEEEC
Confidence            34699999999999999999999999999999986                   2799999988875 45  79999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------CCcchhhHHHHHHHHHHHHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYKKMGED  230 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~k~~~e~  230 (250)
                      ||..... ....+....+++|+.|+.+++++++ .+. +||++||.++|+...       .+..+.+.|+  .+|..+|.
T Consensus        71 A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~--~sK~~~E~  146 (292)
T 1vl0_A           71 AAHTAVD-KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYG--KTKLEGEN  146 (292)
T ss_dssp             CCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH--HHHHHHHH
T ss_pred             CccCCHH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHH--HHHHHHHH
Confidence            9975421 1112334566899999999999985 466 999999998886422       2223344555  77888999


Q ss_pred             HHHhcCCCEEEEecceEEe
Q 025619          231 FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~~~~gi~~~~vrPg~v~~  249 (250)
                      +++..+.+++++||+.|||
T Consensus       147 ~~~~~~~~~~~lR~~~v~G  165 (292)
T 1vl0_A          147 FVKALNPKYYIVRTAWLYG  165 (292)
T ss_dssp             HHHHHCSSEEEEEECSEES
T ss_pred             HHHhhCCCeEEEeeeeeeC
Confidence            9988888999999999996

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=1.2e-22  Score=174.10  Aligned_cols=152  Identities=12%  Similarity=0.090  Sum_probs=114.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhH--hhhhCcCCCCCeeEEEeeCCCccCcchhhhC-----CCcEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTHV  155 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-----~~D~v  155 (250)
                      +||||||+|+||++++++|+++| ++|++++|+++..  ..+.      ++. +.+|++|.+.++++ +.     ++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~-~~~~~~~~~d~v   72 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQI-MAGEEFGDVEAI   72 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHHHH-HTTCCCSSCCEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHHHH-HhccccCCCcEE
Confidence            48999999999999999999999 8999999986542  2221      223 67899998888865 44     59999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC-------CcchhhHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL-------PWSIMNLFGVLKYKKM  227 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~-------~~~~~~~y~~~k~k~~  227 (250)
                      ||+||....   ...+....+++|+.|+.+++++++ .+. +||++||.++++....       +..+.+.|+  .+|..
T Consensus        73 i~~a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~--~sK~~  146 (310)
T 1eq2_A           73 FHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYG--YSKFL  146 (310)
T ss_dssp             EECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH--HHHHH
T ss_pred             EECcccccC---cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH--HHHHH
Confidence            999997642   122334466899999999999885 577 9999999998864321       223344555  56666


Q ss_pred             HHHHHH----hcCCCEEEEecceEEe
Q 025619          228 GEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                      +|.+++    +.|++++++|||++||
T Consensus       147 ~e~~~~~~~~~~g~~~~~lrp~~v~G  172 (310)
T 1eq2_A          147 FDEYVRQILPEANSQIVGFRYFNVYG  172 (310)
T ss_dssp             HHHHHHHHGGGCSSCEEEEEECEEES
T ss_pred             HHHHHHHHHHHcCCCEEEEeCCcEEC
Confidence            776654    4589999999999997

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.86  E-value=2.7e-22  Score=181.63  Aligned_cols=163  Identities=13%  Similarity=0.065  Sum_probs=119.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh--hHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~--~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .+.+|++|||||+||||++++++|+++|++|++++|+..  .+++..+.   .+++++.+|++|.+++++++      ++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~---~~~~~~~~Dvtd~~~v~~~~~~~~~~~g  286 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK---VGGTALTLDVTADDAVDKITAHVTEHHG  286 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH---HTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999743  23322222   24678999999999988654      34


Q ss_pred             C-CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-----CCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 G-VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~-~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-----~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      + +|+||||||+.....   .+.+..+..+++|+.|+.++.+++.     .+.++||++||..+...    ......|+.
T Consensus       287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g----~~g~~~Yaa  362 (454)
T 3u0b_A          287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG----NRGQTNYAT  362 (454)
T ss_dssp             TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC----CTTCHHHHH
T ss_pred             CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC----CCCCHHHHH
Confidence            4 999999999875321   1111223456889999999999762     25679999999888732    233456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++...||++++|+||++.
T Consensus       363 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~  394 (454)
T 3u0b_A          363 TKAGMIGLAEALAPVLADKGITINAVAPGFIE  394 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEcCccc
Confidence            554     223334556689999999999874

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.86  E-value=8.9e-23  Score=180.26  Aligned_cols=165  Identities=14%  Similarity=0.117  Sum_probs=118.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcCC--CC-CeeEEEeeCCCccCcchhhhC-CC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EE-TLQVCKGDTRNPKDLDPAIFE-GV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~~--~~-~~~~v~~Dl~d~~~~~~~~~~-~~  152 (250)
                      +|+||||||+||||++++++|+++|++|++++|+.++     ++.+.+...  .. +++++.+|++|.+++.+++-+ ++
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            3799999999999999999999999999999998754     222211110  12 688999999999998875322 58


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-----CeEEEEccCcccccC------CCCcchhhHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-----KRIVLVSSVGVTKFN------ELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-----~~iV~iSS~~~~~~~------~~~~~~~~~y~  220 (250)
                      |+|||+||..... ..+.+....+++|+.|+.++++++. .++     ++||++||.++|+..      +.+..+.+.|+
T Consensus       108 d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~  186 (381)
T 1n7h_A          108 DEVYNLAAQSHVA-VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA  186 (381)
T ss_dssp             SEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred             CEEEECCcccCcc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchH
Confidence            9999999976421 1112334456889999999999884 333     399999999988742      22344455666


Q ss_pred             HHHHHHHHHHHHH----hcCCCEEEEecceEEe
Q 025619          221 VLKYKKMGEDFVQ----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~~~~----~~gi~~~~vrPg~v~~  249 (250)
                        .+|..+|.+++    +.|++++++||..++|
T Consensus       187 --~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~g  217 (381)
T 1n7h_A          187 --ASKCAAHWYTVNYREAYGLFACNGILFNHES  217 (381)
T ss_dssp             --HHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             --HHHHHHHHHHHHHHHHhCCcEEEEEeCceeC
Confidence              55666665553    3589999999888775

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.86  E-value=3.1e-22  Score=186.97  Aligned_cols=163  Identities=17%  Similarity=0.052  Sum_probs=114.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh---------hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~---------~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      ++++|+++||||++|||++++++|+++|++|++.+|+.         +.++++.+++...+.. ..+|++|.+++++++ 
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVE   83 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHH
Confidence            57889999999999999999999999999999998764         4444443332211222 246888887765433 


Q ss_pred             -----hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||+.....   .+.++.+..+++|+.|+.++.+++     +++.++||++||..+...    ...
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~----~~~  159 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG----NFG  159 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----CTT
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC----CCC
Confidence                 689999999999864221   111122446689999999988876     245689999999887632    223


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecce
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~  246 (250)
                      ...|+.+|.     .+.+..++..+||++++|+||.
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~  195 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA  195 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence            456665554     3344566778899999999973

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.85  E-value=6.3e-22  Score=173.34  Aligned_cols=154  Identities=19%  Similarity=0.225  Sum_probs=116.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-----CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC---Cc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG---VT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~---~D  153 (250)
                      +|+||||||+|+||++++++|+++|     ++|++++|+++...     ....+++++.+|++|.+++.++ +.+   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQCDISDPDDSQAK-LSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCEEEECCTTSHHHHHHH-HTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceEEEEeecCCHHHHHHH-HhcCCCCC
Confidence            4689999999999999999999999     99999999876533     1135788999999999988875 565   99


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC---CCCeEE-------EEccCcccccCC---CC------cc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIV-------LVSSVGVTKFNE---LP------WS  214 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~---~~~~iV-------~iSS~~~~~~~~---~~------~~  214 (250)
                      +|||+||...      .+....+++|+.|+.++++++++   +++++|       ++||.++|+...   .+      ..
T Consensus        75 ~vih~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~  148 (364)
T 2v6g_A           75 HVFYVTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL  148 (364)
T ss_dssp             EEEECCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCC
T ss_pred             EEEECCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCC
Confidence            9999999753      13344668999999999999853   688997       799988876421   11      11


Q ss_pred             h-hhHHHHHHHHHHHHHHHHhcC-CCEEEEecceEEe
Q 025619          215 I-MNLFGVLKYKKMGEDFVQKSG-LPFTIISLCIYCI  249 (250)
Q Consensus       215 ~-~~~y~~~k~k~~~e~~~~~~g-i~~~~vrPg~v~~  249 (250)
                      + .+.|  ...+..+..+.++.| ++++++||+.|||
T Consensus       149 ~~~~~y--~~~E~~~~~~~~~~~~~~~~ilRp~~v~G  183 (364)
T 2v6g_A          149 KYMNFY--YDLEDIMLEEVEKKEGLTWSVHRPGNIFG  183 (364)
T ss_dssp             SSCCHH--HHHHHHHHHHHTTSTTCEEEEEEESSEEC
T ss_pred             ccchhh--HHHHHHHHHHhhcCCCceEEEECCCceeC
Confidence            1 3344  233444444445566 9999999999997

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.85  E-value=1.5e-21  Score=168.67  Aligned_cols=166  Identities=13%  Similarity=0.021  Sum_probs=109.4

Q ss_pred             CCCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecChh-----------hHhhhhCcCCCC----CeeEEEeeC--
Q 025619           78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE-----------KATTLFGKQDEE----TLQVCKGDT--  138 (250)
Q Consensus        78 ~~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~~-----------~~~~~~~~~~~~----~~~~v~~Dl--  138 (250)
                      +++++|++|||||  +||||++++++|+++|++|++++|++.           +++++.+ +...    ...++.+|+  
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRK-LPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHB-CTTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhh-hhccccccccccccccccc
Confidence            3578999999999  899999999999999999999987641           1222211 1111    124445443  


Q ss_pred             ----------C--------CccCcchhh------hCCCcEEEEcCcCCCc---CC--CCCCCCCCcceehHHHHHHHHHH
Q 025619          139 ----------R--------NPKDLDPAI------FEGVTHVICCTGTTAF---PS--RRWDGDNTPEKVDWEGVRNLVSA  189 (250)
Q Consensus       139 ----------~--------d~~~~~~~~------~~~~D~vi~~Ag~~~~---~~--~~~~~~~~~~~~N~~g~~~l~~a  189 (250)
                                +        |.+++++++      ++++|+||||||....   +.  .+.+.....+++|+.|+.+++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                      3        245666543      5689999999997531   11  11112234568899999999998


Q ss_pred             ccCC---CCeEEEEccCcccccCCCCcchh-hHHHHHHH-----HHHHHHHHH-hcCCCEEEEecceEE
Q 025619          190 LPSS---LKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQ-KSGLPFTIISLCIYC  248 (250)
Q Consensus       190 ~~~~---~~~iV~iSS~~~~~~~~~~~~~~-~~y~~~k~-----k~~~e~~~~-~~gi~~~~vrPg~v~  248 (250)
                      +.+.   .++||++||..+...    .+.. ..|+.+|.     .+.+..++. ..||++++|+||+|.
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~----~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERV----VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSC----CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             HHHHHhcCCEEEEEeccccccc----CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            7321   379999999887642    2222 35665554     222334455 379999999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.85  E-value=2.7e-22  Score=187.91  Aligned_cols=165  Identities=15%  Similarity=0.039  Sum_probs=109.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec---------ChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---------DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI  148 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R---------~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~  148 (250)
                      .++++|++|||||+||||++++++|+++|++|++++|         +.++++.+.+++...... +.+|++|.+++++++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVI   93 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHH
Confidence            3678999999999999999999999999999999988         555555444333211222 358999988776543


Q ss_pred             ------hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcc
Q 025619          149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWS  214 (250)
Q Consensus       149 ------~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~  214 (250)
                            ++++|+||||||+.....   ...+..+..+++|+.|+.++++++     +.+.++||++||.++...    ..
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~----~~  169 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG----NF  169 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC----CT
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC----CC
Confidence                  468999999999875321   111122345688999999999876     346689999999887632    23


Q ss_pred             hhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          215 IMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       215 ~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      ....|+.+|.     .+.+..++...||++++|+||.+
T Consensus       170 ~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          170 GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence            3456665553     22333455678999999999964

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.85  E-value=4.2e-22  Score=173.30  Aligned_cols=162  Identities=11%  Similarity=0.046  Sum_probs=113.1

Q ss_pred             CCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecCh---------hhHhhhhCcCC-----CCCeeEEEeeCCCc--c-
Q 025619           82 SKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD-----EETLQVCKGDTRNP--K-  142 (250)
Q Consensus        82 ~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~---------~~~~~~~~~~~-----~~~~~~v~~Dl~d~--~-  142 (250)
                      +|++|||||++  |||++++++|+++|++|++++|++         ++.+.......     ...+.++++|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            68999999985  999999999999999999777654         33332222111     12367889999887  6 


Q ss_pred             -----------------Ccchhh------hCCCcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHcc---
Q 025619          143 -----------------DLDPAI------FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP---  191 (250)
Q Consensus       143 -----------------~~~~~~------~~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~~---  191 (250)
                                       ++++++      ++++|+||||||+.....     ...+.....+++|+.|+.++++++.   
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             666543      578999999999742111     1111224456889999999998762   


Q ss_pred             -CCCCeEEEEccCcccccCCCCcchhh-HHHHHHH-----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          192 -SSLKRIVLVSSVGVTKFNELPWSIMN-LFGVLKY-----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       192 -~~~~~iV~iSS~~~~~~~~~~~~~~~-~y~~~k~-----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                       ++ ++||++||..+..    +.+... .|+.+|.     .+.+..++.. .||++++|+||+|.
T Consensus       162 ~~~-g~Iv~isS~~~~~----~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~  221 (329)
T 3lt0_A          162 KPQ-SSIISLTYHASQK----VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEE-EEEEEEECGGGTS----CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hhC-CeEEEEeCccccC----CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence             23 7999999998874    223332 5665554     2333455666 79999999999874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.85  E-value=8.6e-21  Score=166.51  Aligned_cols=145  Identities=19%  Similarity=0.211  Sum_probs=113.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH--hhhhCcCCCCCeeEEEee-CCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~D-l~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+|+|+||||||+||++++++|+++|++|++++|++++.  +.+.+   ..+++++.+| ++|++++.++ +.++|+|||
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~~-~~~~d~Vi~   79 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMDTL-FEGAHLAFI   79 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHHHH-HTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh---cCCcEEEECCccCCHHHHHHH-HhcCCEEEE
Confidence            357899999999999999999999999999999987654  22321   2468899999 9999999875 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~  235 (250)
                      |++...            .+.|..+ .+++++++ .+ +++||++||........   .+...|+  .+|..+|++++..
T Consensus        80 ~a~~~~------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~---~~~~~y~--~sK~~~E~~~~~~  141 (352)
T 1xgk_A           80 NTTSQA------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP---WPAVPMW--APKFTVENYVRQL  141 (352)
T ss_dssp             CCCSTT------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS---CCCCTTT--HHHHHHHHHHHTS
T ss_pred             cCCCCC------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC---CCCccHH--HHHHHHHHHHHHc
Confidence            987431            1457777 99999884 57 89999999986311111   1123444  7888999999999


Q ss_pred             CCCEEEEecceE
Q 025619          236 GLPFTIISLCIY  247 (250)
Q Consensus       236 gi~~~~vrPg~v  247 (250)
                      |++++++|||++
T Consensus       142 gi~~~ivrpg~~  153 (352)
T 1xgk_A          142 GLPSTFVYAGIY  153 (352)
T ss_dssp             SSCEEEEEECEE
T ss_pred             CCCEEEEeccee
Confidence            999999999864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.85  E-value=2.5e-21  Score=166.29  Aligned_cols=150  Identities=19%  Similarity=0.237  Sum_probs=112.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-----hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-----~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +|+|+||||||+||++++++|+++|++|++++|+.     ++.+.+.. +...+++++.+|++|++++.++ +.++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-FKQLGAKLIEASLDDHQRLVDA-LKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-HHTTTCEEECCCSSCHHHHHHH-HTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHH-HHhCCeEEEeCCCCCHHHHHHH-HhCCCEEE
Confidence            46899999999999999999999999999999983     33332211 1135788999999999999875 78999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccC-CCCcch-hhHHHHHHHHHHHHHHH
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFN-ELPWSI-MNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~-~~~~~~-~~~y~~~k~k~~~e~~~  232 (250)
                      |+|+....            +.|+.++.+++++++ .+ ++|||+ |+.+..... ..+..+ ...  | .+|..+|+++
T Consensus        82 ~~a~~~~~------------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~--y-~sK~~~e~~~  145 (313)
T 1qyd_A           82 SALAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSIT--F-IDKRKVRRAI  145 (313)
T ss_dssp             ECCCCSSS------------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHH--H-HHHHHHHHHH
T ss_pred             ECCccccc------------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcch--H-HHHHHHHHHH
Confidence            99986531            236778899999884 57 899986 443322111 112122 233  4 6788899999


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      ++.|++++++|||++++
T Consensus       146 ~~~g~~~~ilrp~~~~~  162 (313)
T 1qyd_A          146 EAASIPYTYVSSNMFAG  162 (313)
T ss_dssp             HHTTCCBCEEECCEEHH
T ss_pred             HhcCCCeEEEEeceecc
Confidence            99999999999998864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.85  E-value=2.2e-21  Score=166.15  Aligned_cols=166  Identities=13%  Similarity=0.038  Sum_probs=108.8

Q ss_pred             CCCCCEEEEEcCC--ChHHHHHHHHHHHCCCeEEEEecCh-----------hhHhhhhCcCCCCC----eeEEEeeC---
Q 025619           79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP-----------EKATTLFGKQDEET----LQVCKGDT---  138 (250)
Q Consensus        79 ~~~~k~vlVTGas--G~IG~~la~~L~~~G~~V~~~~R~~-----------~~~~~~~~~~~~~~----~~~v~~Dl---  138 (250)
                      ++++|++|||||+  ||||++++++|+++|++|++++|++           ++++++ +++....    ...+.+|+   
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceecc
Confidence            4688999999999  9999999999999999999998753           122222 1111111    23444543   


Q ss_pred             -----C----C--------ccCcchhh------hCCCcEEEEcCcCCCc---C--CCCCCCCCCcceehHHHHHHHHHHc
Q 025619          139 -----R----N--------PKDLDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       139 -----~----d--------~~~~~~~~------~~~~D~vi~~Ag~~~~---~--~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                           +    |        ++++++++      ++++|+||||||....   +  ....+..+..+++|+.|+.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                 2    2        55666543      5689999999996421   1  1111222345688999999999987


Q ss_pred             cC---CCCeEEEEccCcccccCCCCcchh-hHHHHHHH-----HHHHHHHHH-hcCCCEEEEecceEEe
Q 025619          191 PS---SLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQ-KSGLPFTIISLCIYCI  249 (250)
Q Consensus       191 ~~---~~~~iV~iSS~~~~~~~~~~~~~~-~~y~~~k~-----k~~~e~~~~-~~gi~~~~vrPg~v~~  249 (250)
                      .+   ..++||++||..++..    .+.. ..|+.+|.     .+.+..++. +.||++++|+||++.+
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~----~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T  228 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERI----IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSC----CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             HHHhccCceEEEEeccccccC----CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEecccccc
Confidence            32   1379999999887642    2222 35665554     122233444 3799999999998853

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.85  E-value=7.3e-21  Score=174.94  Aligned_cols=150  Identities=16%  Similarity=0.114  Sum_probs=109.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+||||||+|+||++++++|+++|++|++++|++++.+            .+.+|+.|.  +.++ ++++|+|||+||.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~~--~~~~-l~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLNP--ASDL-LDGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTSC--CTTT-TTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccch--hHHh-cCCCCEEEECCCC
Confidence            679999999999999999999999999999999876431            256788753  3433 6899999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHH-c-cCCCCeEEEEccCcccc-c-------CCCCcchhhHHHHHHHHHHHH--
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSA-L-PSSLKRIVLVSSVGVTK-F-------NELPWSIMNLFGVLKYKKMGE--  229 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a-~-~~~~~~iV~iSS~~~~~-~-------~~~~~~~~~~y~~~k~k~~~e--  229 (250)
                      ..............+++|+.|+.+++++ + +.++++||++||.++|+ .       +..+. +.+.|+  +.+...|  
T Consensus       212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~--~~~~~~E~~  288 (516)
T 3oh8_A          212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLA--EVCRDWEHA  288 (516)
T ss_dssp             -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHH--HHHHHHHHT
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHH--HHHHHHHHH
Confidence            6432111112234568899999999998 4 35788999999999987 1       22222 344555  4444444  


Q ss_pred             -HHHHhcCCCEEEEecceEEe
Q 025619          230 -DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 -~~~~~~gi~~~~vrPg~v~~  249 (250)
                       .+.+..|++++++|||.|||
T Consensus       289 ~~~~~~~gi~~~ilRp~~v~G  309 (516)
T 3oh8_A          289 TAPASDAGKRVAFIRTGVALS  309 (516)
T ss_dssp             THHHHHTTCEEEEEEECEEEB
T ss_pred             HHHHHhCCCCEEEEEeeEEEC
Confidence             34457899999999999997

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.84  E-value=3e-21  Score=166.48  Aligned_cols=146  Identities=20%  Similarity=0.259  Sum_probs=109.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|+|+||||+|+||++++++|+++|++|++++|+++ +.+.+. .+...+++++.+|++|++++.++ +.++|+|||+|
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a-~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQSLGAIIVKGELDEHEKLVEL-MKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-HhhcCCCEEEEecCCCHHHHHHH-HcCCCEEEECC
Confidence            3468999999999999999999999999999999874 322211 11134688999999999999875 78999999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcch-hhHHHHHHHHHHHHHHHHhcC
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSI-MNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~-~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      +...                +.++.+++++++ .+ +++||+ |+.+....+..+..+ ...  | .+|..+|+++++.|
T Consensus        88 ~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~--y-~sK~~~e~~~~~~~  147 (318)
T 2r6j_A           88 AFPQ----------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEAL--I-ERKRMIRRAIEEAN  147 (318)
T ss_dssp             CGGG----------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHH--H-HHHHHHHHHHHHTT
T ss_pred             chhh----------------hHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchh--H-HHHHHHHHHHHhcC
Confidence            8532                345688999884 56 889985 443322111122222 223  4 67888999999999


Q ss_pred             CCEEEEecceEE
Q 025619          237 LPFTIISLCIYC  248 (250)
Q Consensus       237 i~~~~vrPg~v~  248 (250)
                      ++++++|||+++
T Consensus       148 ~~~~~lr~~~~~  159 (318)
T 2r6j_A          148 IPYTYVSANCFA  159 (318)
T ss_dssp             CCBEEEECCEEH
T ss_pred             CCeEEEEcceeh
Confidence            999999999875

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.84  E-value=5.6e-21  Score=163.65  Aligned_cols=146  Identities=18%  Similarity=0.274  Sum_probs=109.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-------hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-------~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ||+|+||||||+||++++++|+++|++|++++|++       ++.+.+.+ +...+++++.+|++|.+++.++ +.++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~~~-~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDN-YQSLGVILLEGDINDHETLVKA-IKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHH-HTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHH-HHhCCCEEEEeCCCCHHHHHHH-HhCCCE
Confidence            46899999999999999999999999999999986       44433211 1134688999999999999875 789999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcch-hhHHHHHHHHHHHHHH
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSI-MNLFGVLKYKKMGEDF  231 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~-~~~y~~~k~k~~~e~~  231 (250)
                      |||+|+...                +.++.+++++++ .+ +++||+ |+.+....+..+..+ ...  | .+|..+|++
T Consensus        80 vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~--y-~sK~~~e~~  139 (307)
T 2gas_A           80 VICAAGRLL----------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQV--F-EEKASIRRV  139 (307)
T ss_dssp             EEECSSSSC----------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHH--H-HHHHHHHHH
T ss_pred             EEECCcccc----------------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhH--H-HHHHHHHHH
Confidence            999998532                356788999884 56 899984 443322111122222 233  4 678889999


Q ss_pred             HHhcCCCEEEEecceEEe
Q 025619          232 VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       232 ~~~~gi~~~~vrPg~v~~  249 (250)
                      +++.|++++++|||++++
T Consensus       140 ~~~~~i~~~~lrp~~~~~  157 (307)
T 2gas_A          140 IEAEGVPYTYLCCHAFTG  157 (307)
T ss_dssp             HHHHTCCBEEEECCEETT
T ss_pred             HHHcCCCeEEEEcceeec
Confidence            999999999999998864

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.84  E-value=3.8e-21  Score=175.44  Aligned_cols=163  Identities=17%  Similarity=0.155  Sum_probs=118.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh---HhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----h
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----F  149 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~---~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----~  149 (250)
                      +++++|||||+||||.+++++|+++|+ +|++++|+...   .+++.+++.  +.++.++.+|++|.+++++++     .
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            458999999999999999999999999 78888997432   223222221  457889999999999988654     1


Q ss_pred             CCCcEEEEcCcCC-CcCC---CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          150 EGVTHVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       150 ~~~D~vi~~Ag~~-~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      +++|+||||||+. ....   .+.+.....+++|+.|+.++.+++. .+.++||++||..+..    +......|+.+|.
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~----g~~g~~~YaAaKa  393 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW----GSGGQPGYAAANA  393 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----TCTTCHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC----CCCCcHHHHHHHH
Confidence            3699999999986 3111   1111123456889999999999885 4678999999988773    2233456665443


Q ss_pred             H-HHHHHHHHhcCCCEEEEecceE
Q 025619          225 K-KMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       225 k-~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      . ..+.++++..|+++++|+||.+
T Consensus       394 ~ldala~~~~~~Gi~v~sV~pG~w  417 (496)
T 3mje_A          394 YLDALAEHRRSLGLTASSVAWGTW  417 (496)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEECEE
T ss_pred             HHHHHHHHHHhcCCeEEEEECCcc
Confidence            1 1223455678999999999976

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.84  E-value=2.5e-21  Score=167.54  Aligned_cols=166  Identities=11%  Similarity=0.019  Sum_probs=99.0

Q ss_pred             CCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecCh-----------hhHhh-----------hhCcCCCC-----
Q 025619           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP-----------EKATT-----------LFGKQDEE-----  129 (250)
Q Consensus        79 ~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~-----------~~~~~-----------~~~~~~~~-----  129 (250)
                      ++++|++|||||  ++|||++++++|+++|++|++++|++           +++++           +.+++...     
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            578899999999  89999999999999999999998753           22211           11111110     


Q ss_pred             CeeEEEeeC------------CC--------ccCcchhh------hCCCcEEEEcCcCCC--c-CC--CCCCCCCCccee
Q 025619          130 TLQVCKGDT------------RN--------PKDLDPAI------FEGVTHVICCTGTTA--F-PS--RRWDGDNTPEKV  178 (250)
Q Consensus       130 ~~~~v~~Dl------------~d--------~~~~~~~~------~~~~D~vi~~Ag~~~--~-~~--~~~~~~~~~~~~  178 (250)
                      ...++.+|+            +|        .+++++++      ++++|+||||||...  . +.  ...+..+..+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            124444443            32        34565433      568999999999652  1 11  111122345688


Q ss_pred             hHHHHHHHHHHccC---CCCeEEEEccCcccccCCCCcchh-hHHHHHHH-----HHHHHHHHHh-cCCCEEEEecceEE
Q 025619          179 DWEGVRNLVSALPS---SLKRIVLVSSVGVTKFNELPWSIM-NLFGVLKY-----KKMGEDFVQK-SGLPFTIISLCIYC  248 (250)
Q Consensus       179 N~~g~~~l~~a~~~---~~~~iV~iSS~~~~~~~~~~~~~~-~~y~~~k~-----k~~~e~~~~~-~gi~~~~vrPg~v~  248 (250)
                      |+.|+.++++++.+   ..++||++||..+...    .+.. ..|+.+|.     .+.+..++.. .||++++|+||+|.
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKV----IPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEeccccccc----cCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            99999999997732   1379999999887632    2222 35665553     2333345553 79999999999874

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=8.4e-22  Score=165.93  Aligned_cols=148  Identities=20%  Similarity=0.097  Sum_probs=112.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC--CCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~--~~D~vi~~Ag  160 (250)
                      |+||||||+|+||++++++|+ +|++|++++|+++. +        .+   +.+|++|+++++++ +.  ++|+||||||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~---~~~Dl~~~~~~~~~-~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG---YKLDLTDFPRLEDF-IIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC---EECCTTSHHHHHHH-HHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC---ceeccCCHHHHHHH-HHhcCCCEEEECCc
Confidence            369999999999999999999 48999999998742 1        12   78999999998875 44  5999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCC------CcchhhHHHHHHHHHHHHHHHHh
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNEL------PWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~------~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      ..... ....+....+++|+.++.++++++++...+||++||..+++....      +..+...|+  .+|.++|.+++.
T Consensus        67 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~--~sK~~~e~~~~~  143 (273)
T 2ggs_A           67 MTDVD-KCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYG--LSKLLGETFALQ  143 (273)
T ss_dssp             CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH--HHHHHHHHHHCC
T ss_pred             ccChh-hhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHH--HHHHHHHHHHhC
Confidence            76421 111233446689999999999998532249999999998864322      222344555  678888888877


Q ss_pred             cCCCEEEEecceEEe
Q 025619          235 SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ~gi~~~~vrPg~v~~  249 (250)
                        ++++++||+.+||
T Consensus       144 --~~~~~iR~~~v~G  156 (273)
T 2ggs_A          144 --DDSLIIRTSGIFR  156 (273)
T ss_dssp             --TTCEEEEECCCBS
T ss_pred             --CCeEEEecccccc
Confidence              8899999999885

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.83  E-value=3.9e-21  Score=175.43  Aligned_cols=164  Identities=20%  Similarity=0.146  Sum_probs=117.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhh---HhhhhCcC--CCCCeeEEEeeCCCccCcchhh-----h
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----F  149 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----~  149 (250)
                      .++++|||||+||||.+++++|+++|++ |++++|+...   .+++.+++  .+.++.++.+|++|.+++++++     +
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999995 9999998752   22222211  1456889999999999888653     2


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      +++|+||||||......   ...+.....+++|+.|+.++.++++ .+.++||++||..+...    ......|+.+|..
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g----~~g~~~Yaaaka~  380 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG----APGLGGYAPGNAY  380 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC----CTTCTTTHHHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCC----CCCCHHHHHHHHH
Confidence            35799999999865221   1111223455789999999999885 46789999999877532    2223456654432


Q ss_pred             H-HHHHHHHhcCCCEEEEecceEE
Q 025619          226 K-MGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~-~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      . .+.++++..|+++++|+||.+.
T Consensus       381 l~~la~~~~~~gi~v~~i~pG~~~  404 (486)
T 2fr1_A          381 LDGLAQQRRSDGLPATAVAWGTWA  404 (486)
T ss_dssp             HHHHHHHHHHTTCCCEEEEECCBC
T ss_pred             HHHHHHHHHhcCCeEEEEECCeeC
Confidence            1 2234556789999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.83  E-value=2.5e-21  Score=171.92  Aligned_cols=164  Identities=16%  Similarity=0.091  Sum_probs=110.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecChhhHhh------------hhCcC--CCCCeeEEEeeCCCccCcc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATT------------LFGKQ--DEETLQVCKGDTRNPKDLD  145 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~~~~~~------------~~~~~--~~~~~~~v~~Dl~d~~~~~  145 (250)
                      .+|++|||||++|||+++++.|++ +|++|++++|+.+..++            +.+.+  .+..+..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            579999999999999999999999 99999999998654321            11111  1446778999999999887


Q ss_pred             hhh------h-CCCcEEEEcCcCCCc-----------CCCCCC---------------------C-C----CCcceehHH
Q 025619          146 PAI------F-EGVTHVICCTGTTAF-----------PSRRWD---------------------G-D----NTPEKVDWE  181 (250)
Q Consensus       146 ~~~------~-~~~D~vi~~Ag~~~~-----------~~~~~~---------------------~-~----~~~~~~N~~  181 (250)
                      +++      + +++|+||||||....           ......                     + .    ...+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            654      7 899999999997310           000000                     0 0    112233444


Q ss_pred             HHH-HHHHHc-c----CCCCeEEEEccCcccccCCCCcchh--hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          182 GVR-NLVSAL-P----SSLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       182 g~~-~l~~a~-~----~~~~~iV~iSS~~~~~~~~~~~~~~--~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.. .+++++ .    .+.++||++||.++..    +.+..  ..|+.+|.     .+.+..++...||++++|+||+|-
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~----~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~  295 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEI----TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVV  295 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG----GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc----cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCc
Confidence            443 455543 1    2237899999998762    33333  55665553     334446677789999999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.83  E-value=7.7e-21  Score=177.60  Aligned_cols=162  Identities=14%  Similarity=0.072  Sum_probs=113.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhH-hhhhCcCCCCCeeEEEeeC-CCccCcchhh---hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKA-TTLFGKQDEETLQVCKGDT-RNPKDLDPAI---FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~-~~~~~~~~~~~~~~v~~Dl-~d~~~~~~~~---~~~~  152 (250)
                      ++++|+++||||++|||++++++|+++|++|++.+|+. +.. +++.+ . ..++..+.+|+ ++.+.+-+.+   ++++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~-g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-A-GGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-T-TCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-c-CCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999998632 222 22221 1 33456677888 5544322222   6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||+.....   .+.++.+..+++|+.|+.++.+++     +++.++||++||.++..    +......|+.+|.
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~----~~~~~~~Y~asKa  472 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY----GNFGQANYSSSKA  472 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----CCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----CCCCChhHHHHHH
Confidence            99999999864221   111222445689999999988876     24568999999988763    2233456766554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecce
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCI  246 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~  246 (250)
                           .+.+..++..+||++++|+||.
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence                 3344566778899999999994

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.83  E-value=1.3e-20  Score=161.36  Aligned_cols=146  Identities=22%  Similarity=0.276  Sum_probs=108.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh------hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE------KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~------~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      +|+|+||||||+||++++++|+++|++|++++|+..      +.+.+. .+...+++++.+|++|++++.++ ++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLE-SFKASGANIVHGSIDDHASLVEA-VKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHH-HHHTTTCEEECCCTTCHHHHHHH-HHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HHHhCCCEEEEeccCCHHHHHHH-HcCCCEE
Confidence            568999999999999999999999999999999842      222211 11145789999999999999875 7889999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcch-hhHHHHHHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSI-MNLFGVLKYKKMGEDFV  232 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~-~~~y~~~k~k~~~e~~~  232 (250)
                      ||+|+...                +.++.+++++++ .+ ++|||+ |+.+....+..+..+ ...  | .+|..+|+++
T Consensus        82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~--y-~sK~~~e~~~  141 (308)
T 1qyc_A           82 ISTVGSLQ----------------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSV--F-EVKAKVRRAI  141 (308)
T ss_dssp             EECCCGGG----------------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHH--H-HHHHHHHHHH
T ss_pred             EECCcchh----------------hhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhH--H-HHHHHHHHHH
Confidence            99998532                345678889884 56 899984 544322222122222 223  4 6788899999


Q ss_pred             HhcCCCEEEEecceEEe
Q 025619          233 QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       233 ~~~gi~~~~vrPg~v~~  249 (250)
                      ++.|++++++|||++++
T Consensus       142 ~~~~~~~~~~r~~~~~~  158 (308)
T 1qyc_A          142 EAEGIPYTYVSSNCFAG  158 (308)
T ss_dssp             HHHTCCBEEEECCEEHH
T ss_pred             HhcCCCeEEEEeceecc
Confidence            99999999999998864

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.82  E-value=1.4e-20  Score=162.43  Aligned_cols=147  Identities=16%  Similarity=0.215  Sum_probs=108.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh------hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~------~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      +|+|+||||+|+||++++++|+++|++|++++|++      ++.+.+.+ +...+++++.+|++|.+++.++ +.++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~~a-~~~~d~v   81 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMVSV-LKQVDIV   81 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHH-HTTCSEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHHHH-HcCCCEE
Confidence            46899999999999999999999999999999986      23222211 1134688999999999999875 7899999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHH
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQ  233 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~  233 (250)
                      ||+|+...                +.++.+++++++ .+ +++||+ |+.+....+..+..+ ....| .+|..+|++++
T Consensus        82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p-~~~~y-~sK~~~e~~~~  142 (321)
T 3c1o_A           82 ISALPFPM----------------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPP-FESVL-EKKRIIRRAIE  142 (321)
T ss_dssp             EECCCGGG----------------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHH-HHHHH-HHHHHHHHHHH
T ss_pred             EECCCccc----------------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCC-cchHH-HHHHHHHHHHH
Confidence            99998532                345688999884 56 899983 433221111122222 11235 67888999999


Q ss_pred             hcCCCEEEEecceEEe
Q 025619          234 KSGLPFTIISLCIYCI  249 (250)
Q Consensus       234 ~~gi~~~~vrPg~v~~  249 (250)
                      +.|++++++|||++++
T Consensus       143 ~~~~~~~~lrp~~~~~  158 (321)
T 3c1o_A          143 AAALPYTYVSANCFGA  158 (321)
T ss_dssp             HHTCCBEEEECCEEHH
T ss_pred             HcCCCeEEEEeceecc
Confidence            9999999999998863

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.82  E-value=5.7e-21  Score=168.32  Aligned_cols=165  Identities=14%  Similarity=0.034  Sum_probs=111.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecChhhHhh------------hhCcC--CCCCeeEEEeeCCCccCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATT------------LFGKQ--DEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~~~~~~------------~~~~~--~~~~~~~v~~Dl~d~~~~  144 (250)
                      ..+|++|||||++|||+++++.|++ +|++|++++|+.+..++            +.+.+  .+..+..+.+|++|++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3579999999999999999999999 99999999987543221            11111  144677899999999988


Q ss_pred             chhh------hCCCcEEEEcCcCCCc-----------CCCCC---------------------C-----CCCCcceehHH
Q 025619          145 DPAI------FEGVTHVICCTGTTAF-----------PSRRW---------------------D-----GDNTPEKVDWE  181 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~~-----------~~~~~---------------------~-----~~~~~~~~N~~  181 (250)
                      ++++      ++++|+||||||....           .....                     .     .....+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            8654      6899999999997411           00000                     0     01122355655


Q ss_pred             HHH-HHHHHc-----cCCCCeEEEEccCcccccCCCCcchh--hHHHHHHH-----HHHHHHHHHhc-CCCEEEEecceE
Q 025619          182 GVR-NLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQKS-GLPFTIISLCIY  247 (250)
Q Consensus       182 g~~-~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~--~~y~~~k~-----k~~~e~~~~~~-gi~~~~vrPg~v  247 (250)
                      +.. .+++++     ..+.++||++||.++..    +++..  ..|+.+|.     .+.+..++... ||++++|.||.+
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~----~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i  280 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI----THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAV  280 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG----GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCC
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC----cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCC
Confidence            554 444443     12237999999998763    22222  56665553     34445667778 999999999987


Q ss_pred             E
Q 025619          248 C  248 (250)
Q Consensus       248 ~  248 (250)
                      -
T Consensus       281 ~  281 (405)
T 3zu3_A          281 V  281 (405)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.82  E-value=4.1e-21  Score=176.72  Aligned_cols=161  Identities=14%  Similarity=0.045  Sum_probs=115.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEE-ecCh-------------hhHhhhhCcCC--CCCeeEEEeeCCCccC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLL-LRDP-------------EKATTLFGKQD--EETLQVCKGDTRNPKD  143 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~-~R~~-------------~~~~~~~~~~~--~~~~~~v~~Dl~d~~~  143 (250)
                      .++++|||||+||||.+++++|+++|++ |+++ +|+.             ++++++.+++.  +.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5789999999999999999999999997 6677 8873             33333322221  4578899999999998


Q ss_pred             cchhh-----hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc-C----C-CCeEEEEccCcccccC
Q 025619          144 LDPAI-----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-S----S-LKRIVLVSSVGVTKFN  209 (250)
Q Consensus       144 ~~~~~-----~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~-~----~-~~~iV~iSS~~~~~~~  209 (250)
                      +++++     ++++|+||||||+.....   .+.+.....+++|+.|+.++.+++. .    + .++||++||.++... 
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g-  408 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG-  408 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC-
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC-
Confidence            88654     357899999999865321   1111223456889999999999872 2    2 689999999988732 


Q ss_pred             CCCcchhhHHHHHHHHHHHHHHH---HhcCCCEEEEecceE
Q 025619          210 ELPWSIMNLFGVLKYKKMGEDFV---QKSGLPFTIISLCIY  247 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~k~~~e~~~---~~~gi~~~~vrPg~v  247 (250)
                         ......|+  .+|..++.+.   +..|+++++|+||.+
T Consensus       409 ---~~g~~~Ya--aaKa~l~~lA~~~~~~gi~v~sI~pG~~  444 (525)
T 3qp9_A          409 ---GAGQGAYA--AGTAFLDALAGQHRADGPTVTSVAWSPW  444 (525)
T ss_dssp             ---CTTCHHHH--HHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred             ---CCCCHHHH--HHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence               23345555  4555555443   457999999999986

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.82  E-value=2.2e-20  Score=171.29  Aligned_cols=161  Identities=19%  Similarity=0.131  Sum_probs=117.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh---HhhhhCcCC--CCCeeEEEeeCCCccCcchhhh-CCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-EGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~---~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~-~~~D  153 (250)
                      .++++|||||+||||.+++++|+++|+ +|++++|+...   .+++.+++.  +.++.++.+|++|.+++++++- +++|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            578999999999999999999999999 69999998642   222222221  3468889999999999987532 4699


Q ss_pred             EEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHccC--CCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHH
Q 025619          154 HVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~  228 (250)
                      +||||||.......   ..+.....+++|+.|+.++.+++..  +.++||++||..+...    ......|+.  +|..+
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g----~~g~~~Yaa--aKa~l  411 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWG----NAGQGAYAA--ANAAL  411 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTC----CTTBHHHHH--HHHHH
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCC----CCCCHHHHH--HHHHH
Confidence            99999998653211   1111233457899999999998853  6789999999877532    223456664  44444


Q ss_pred             HH---HHHhcCCCEEEEecceE
Q 025619          229 ED---FVQKSGLPFTIISLCIY  247 (250)
Q Consensus       229 e~---~~~~~gi~~~~vrPg~v  247 (250)
                      +.   .++..|+++++|+||.+
T Consensus       412 d~la~~~~~~gi~v~sv~pG~~  433 (511)
T 2z5l_A          412 DALAERRRAAGLPATSVAWGLW  433 (511)
T ss_dssp             HHHHHHHHTTTCCCEEEEECCB
T ss_pred             HHHHHHHHHcCCcEEEEECCcc
Confidence            43   34568999999999976

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.82  E-value=2.7e-20  Score=163.79  Aligned_cols=128  Identities=20%  Similarity=0.227  Sum_probs=103.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      |+||||||+|+||++++++|+++|+ +|+.++|+                       +|.++++++ +.++|+|||+||.
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~~-~~~~d~Vih~a~~   56 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELESA-LLKADFIVHLAGV   56 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHHH-HHHCSEEEECCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHHH-hccCCEEEECCcC
Confidence            4799999999999999999999998 77766654                       567777764 6789999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHh----c
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQK----S  235 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~----~  235 (250)
                      ...     .+....+++|+.++.+++++++ .+.+ +||++||..+++        .+.|+  .+|..+|+.++.    .
T Consensus        57 ~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------~~~Y~--~sK~~~E~~~~~~~~~~  121 (369)
T 3st7_A           57 NRP-----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------DNPYG--ESKLQGEQLLREYAEEY  121 (369)
T ss_dssp             BCT-----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------CSHHH--HHHHHHHHHHHHHHHHH
T ss_pred             CCC-----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------CCCch--HHHHHHHHHHHHHHHHh
Confidence            652     2345567899999999999985 5666 999999999885        23444  667777766654    7


Q ss_pred             CCCEEEEecceEEe
Q 025619          236 GLPFTIISLCIYCI  249 (250)
Q Consensus       236 gi~~~~vrPg~v~~  249 (250)
                      |++++++||+.+||
T Consensus       122 g~~~~i~R~~~v~G  135 (369)
T 3st7_A          122 GNTVYIYRWPNLFG  135 (369)
T ss_dssp             CCCEEEEEECEEEC
T ss_pred             CCCEEEEECCceeC
Confidence            99999999999997

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.80  E-value=1.2e-19  Score=155.07  Aligned_cols=149  Identities=19%  Similarity=0.213  Sum_probs=104.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+||||||||+||++++++|+++||+|++++|++++.          .   +..|-.+     ...+.++|+|||+|+..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~~~~-----~~~l~~~d~vihla~~~   62 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWDELA-----ASGLPSCDAAVNLAGEN   62 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHHHHH-----HHCCCSCSEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecchhh-----HhhccCCCEEEEeccCc
Confidence            4799999999999999999999999999999976421          1   2222111     11257899999999864


Q ss_pred             CcC-CCCCCCC--CCcceehHHHHHHHHHHcc---CCCCeEEEEccCccccc-------CCCCcchhhHHHHHHHHHHHH
Q 025619          163 AFP-SRRWDGD--NTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       163 ~~~-~~~~~~~--~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~~~e  229 (250)
                      ... ...|...  ....+.|+.++.+++++++   ....++|+.||.++|++       ++.|..+.+.|+..+.+.+.+
T Consensus        63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH
Confidence            321 1223221  2345779999999999773   34557899999999874       233444455566554454555


Q ss_pred             HHHHhcCCCEEEEecceEEe
Q 025619          230 DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ......+++++++||+.|||
T Consensus       143 ~~~~~~~~~~~~~r~~~v~g  162 (298)
T 4b4o_A          143 ARLPGDSTRQVVVRSGVVLG  162 (298)
T ss_dssp             HCCSSSSSEEEEEEECEEEC
T ss_pred             HHhhccCCceeeeeeeeEEc
Confidence            55567899999999999987

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.79  E-value=5.7e-20  Score=164.03  Aligned_cols=165  Identities=13%  Similarity=0.078  Sum_probs=109.1

Q ss_pred             CCCCEEEEEcCCChHHHH--HHHHHHHCCCeEEEEecChhhH------------hhhhCcC--CCCCeeEEEeeCCCccC
Q 025619           80 SSSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPEKA------------TTLFGKQ--DEETLQVCKGDTRNPKD  143 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~--la~~L~~~G~~V~~~~R~~~~~------------~~~~~~~--~~~~~~~v~~Dl~d~~~  143 (250)
                      ..+|++|||||++|||++  ++++|+++|++|++++|+.+..            +.+.+..  .+..+..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            478999999999999999  9999999999999999865321            1111111  14467889999999998


Q ss_pred             cchhh------hCCCcEEEEcCcCCCcC-----------CCCCC-----------------------C---CCCcceehH
Q 025619          144 LDPAI------FEGVTHVICCTGTTAFP-----------SRRWD-----------------------G---DNTPEKVDW  180 (250)
Q Consensus       144 ~~~~~------~~~~D~vi~~Ag~~~~~-----------~~~~~-----------------------~---~~~~~~~N~  180 (250)
                      +++++      ++++|+||||||.....           .....                       .   ....+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            88654      57899999999974100           00000                       0   001113333


Q ss_pred             HHHH-HHHHHc-----cCCCCeEEEEccCcccccCCCCcchh--hHHHHHHH-----HHHHHHHHHh-cCCCEEEEecce
Q 025619          181 EGVR-NLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIM--NLFGVLKY-----KKMGEDFVQK-SGLPFTIISLCI  246 (250)
Q Consensus       181 ~g~~-~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~--~~y~~~k~-----k~~~e~~~~~-~gi~~~~vrPg~  246 (250)
                      .+.. .+++++     ....++||++||.++..    +++..  ..|+.+|.     .+.+..++.. .||++++|.||+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~----~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~  293 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR----TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKA  293 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG----GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC----CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCc
Confidence            3333 344443     12246899999988763    22333  56665553     3344566777 899999999998


Q ss_pred             EE
Q 025619          247 YC  248 (250)
Q Consensus       247 v~  248 (250)
                      |-
T Consensus       294 v~  295 (418)
T 4eue_A          294 LV  295 (418)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.78  E-value=1.1e-19  Score=174.51  Aligned_cols=163  Identities=20%  Similarity=0.220  Sum_probs=121.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHH-HCCC-eEEEEecChh---hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-----
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLL-SRNI-KSRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~-~~G~-~V~~~~R~~~---~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+|++|||||+||||++++++|+ ++|+ +|++++|+..   +.+++.+++.  +.++.++.||++|.+++++++     
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999 7999 5999999843   3333332221  456889999999999988754     


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      ..++|+||||||+.....   .+.++.+..+++|+.|+.++.+++.... +||++||.++..    +......|+.+|. 
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~----g~~g~~~YaAaka~  683 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVL----GSGGQGNYAAANSF  683 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHH----TCSSCHHHHHHHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcC----CCCCCHHHHHHHHH
Confidence            126899999999875321   1222234466899999999999985545 999999998874    2334456766554 


Q ss_pred             HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ...+.++++..||++++|.||++.
T Consensus       684 ~~alA~~~~~~Gi~v~sI~pG~v~  707 (795)
T 3slk_A          684 LDALAQQRQSRGLPTRSLAWGPWA  707 (795)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCS
T ss_pred             HHHHHHHHHHcCCeEEEEECCeEC
Confidence            334446677889999999999863

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.75  E-value=1.4e-18  Score=175.86  Aligned_cols=161  Identities=16%  Similarity=0.081  Sum_probs=115.8

Q ss_pred             CCCCCEEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCc----CC--CCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLFGK----QD--EETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~----~~--~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      ++++|++|||||++| ||++++++|+++|++|+++ .|+.++++++.++    +.  +.++.++.+|++|.+++++++  
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            578899999999998 9999999999999999998 5776665443221    11  346788999999999888654  


Q ss_pred             ---------hC-CCcEEEEcCcCCCcC-C-CC----CCCCCCcceehHHHHHHHHHHc--c-----CCCCeEEEEccCcc
Q 025619          149 ---------FE-GVTHVICCTGTTAFP-S-RR----WDGDNTPEKVDWEGVRNLVSAL--P-----SSLKRIVLVSSVGV  205 (250)
Q Consensus       149 ---------~~-~~D~vi~~Ag~~~~~-~-~~----~~~~~~~~~~N~~g~~~l~~a~--~-----~~~~~iV~iSS~~~  205 (250)
                               ++ ++|+||||||+.... . .+    .+.....+++|+.|+.++++++  .     .+.++||++||..+
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag  831 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  831 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence                     22 699999999986432 1 11    1122446689999999988865  1     12369999999887


Q ss_pred             cccCCCCcchhhHHHHHHHHHHHHHH--------HHhcCCCEEEEecceEE
Q 025619          206 TKFNELPWSIMNLFGVLKYKKMGEDF--------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       206 ~~~~~~~~~~~~~y~~~k~k~~~e~~--------~~~~gi~~~~vrPg~v~  248 (250)
                      ..+      ....|+.+  |..++.+        +... |++++|+||++.
T Consensus       832 ~~g------g~~aYaAS--KAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~  873 (1887)
T 2uv8_A          832 TFG------GDGMYSES--KLSLETLFNRWHSESWANQ-LTVCGAIIGWTR  873 (1887)
T ss_dssp             CSS------CBTTHHHH--HHHGGGHHHHHHHSSCTTT-EEEEEEEECCEE
T ss_pred             ccC------CCchHHHH--HHHHHHHHHHHHHHHhCCC-eEEEEEEecccc
Confidence            743      23456544  4444333        2233 999999999986

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.73  E-value=9.6e-19  Score=172.45  Aligned_cols=162  Identities=15%  Similarity=0.091  Sum_probs=115.5

Q ss_pred             CCCCCEEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcC----C--CCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~----~--~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      ++++|++|||||+|| ||++++++|+++|++|+++ .|+.+++++..+++    .  +.++.++.+|++|.+++++++  
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            578899999999998 9999999999999999998 57666554432222    1  345788999999999988654  


Q ss_pred             ---------hC-CCcEEEEcCcCCCcC-C-CCC----CCCCCcceehHHHHHHHHHHc------c-CCCCeEEEEccCcc
Q 025619          149 ---------FE-GVTHVICCTGTTAFP-S-RRW----DGDNTPEKVDWEGVRNLVSAL------P-SSLKRIVLVSSVGV  205 (250)
Q Consensus       149 ---------~~-~~D~vi~~Ag~~~~~-~-~~~----~~~~~~~~~N~~g~~~l~~a~------~-~~~~~iV~iSS~~~  205 (250)
                               ++ ++|+||||||+.... . .+.    +.....+++|+.|+.++++++      + .+.++||++||.++
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG  632 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG  632 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence                     23 699999999986432 1 111    112345689999999888765      1 22368999999887


Q ss_pred             cccCCCCcchhhHHHHHHHHHHHHHH----HHh---cCCCEEEEecceEE
Q 025619          206 TKFNELPWSIMNLFGVLKYKKMGEDF----VQK---SGLPFTIISLCIYC  248 (250)
Q Consensus       206 ~~~~~~~~~~~~~y~~~k~k~~~e~~----~~~---~gi~~~~vrPg~v~  248 (250)
                      ..+      ....|+  .+|.+++.+    +..   .+|++++|+||++-
T Consensus       633 ~~G------g~saYa--ASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~  674 (1688)
T 2pff_A          633 TFG------GDGMYS--ESKLSLETLFNRWHSESWANQLTVCGAIIGWTR  674 (1688)
T ss_dssp             TSS------CBTTHH--HHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCC
T ss_pred             ccC------CchHHH--HHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCc
Confidence            643      223455  556555554    111   13999999999985

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.73  E-value=5.8e-18  Score=171.03  Aligned_cols=161  Identities=15%  Similarity=0.092  Sum_probs=113.6

Q ss_pred             CCCCCEEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-cChhhHhhhh----CcCC--CCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLL-RDPEKATTLF----GKQD--EETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~----~~~~--~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      ++++|++|||||+|| ||.+++++|+++|++|++++ |+.+++++..    +++.  +.++.++.+|++|.+++++++  
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            468899999999999 99999999999999999985 6555543322    2222  346788999999999988654  


Q ss_pred             -------hC-CCcEEEEcCcCCCcC-C-CCC----CCCCCcceehHHHHHHHHHHc------c-CCCCeEEEEccCcccc
Q 025619          149 -------FE-GVTHVICCTGTTAFP-S-RRW----DGDNTPEKVDWEGVRNLVSAL------P-SSLKRIVLVSSVGVTK  207 (250)
Q Consensus       149 -------~~-~~D~vi~~Ag~~~~~-~-~~~----~~~~~~~~~N~~g~~~l~~a~------~-~~~~~iV~iSS~~~~~  207 (250)
                             ++ ++|+||||||+.... . .+.    +.....+++|+.|+.++++++      . .+.++||++||..+..
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~  808 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF  808 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence                   23 699999999986432 1 111    112346689999998887652      1 2347999999988764


Q ss_pred             cCCCCcchhhHHHHHHHHHHHHHH--------HHhcCCCEEEEecceEE
Q 025619          208 FNELPWSIMNLFGVLKYKKMGEDF--------VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       208 ~~~~~~~~~~~y~~~k~k~~~e~~--------~~~~gi~~~~vrPg~v~  248 (250)
                      +.      ...|+.+  |..++.+        +... |++++|+||++-
T Consensus       809 gg------~~aYaAS--KAAL~aLt~~laAeEla~~-IrVNaVaPG~V~  848 (1878)
T 2uv9_A          809 GN------DGLYSES--KLALETLFNRWYSESWGNY-LTICGAVIGWTR  848 (1878)
T ss_dssp             SC------CSSHHHH--HHHHTTHHHHHHHSTTTTT-EEEEEEEECCBC
T ss_pred             CC------chHHHHH--HHHHHHHHHHHHHHHcCCC-eEEEEEEeccee
Confidence            31      2355544  4444332        2223 999999999874

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.65  E-value=1.4e-17  Score=144.58  Aligned_cols=162  Identities=12%  Similarity=0.104  Sum_probs=109.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++|+||||+|+||++++..|+++|+       +|+++++++  ++.+.....+....+.++ .|+++.+++.++ +.++|
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a-~~~~D   82 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVA-FKDAD   82 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHH-TTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHH-hCCCC
Confidence            4899999999999999999999996       899999874  222221111111122333 688877777765 68999


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CC-eEEEEccCccc-c---cCCC-CcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LK-RIVLVSSVGVT-K---FNEL-PWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~-~iV~iSS~~~~-~---~~~~-~~~~~~~y~~~k~k  225 (250)
                      +|||+||....+   .....+.++.|+.++.+++++++ .+ .+ +++++|+.... .   .+.. ++++.+.|+.+|..
T Consensus        83 ~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~  159 (327)
T 1y7t_A           83 YALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLD  159 (327)
T ss_dssp             EEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHH
T ss_pred             EEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHH
Confidence            999999986532   22334567899999999999985 33 44 78888775411 1   1112 34566677754431


Q ss_pred             --HHHHHHHHhcCCCEEEEecceEEe
Q 025619          226 --KMGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 --~~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                        +....+.+..|++++.+||..|||
T Consensus       160 ~er~~~~~a~~~g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          160 HNRAKAQLAKKTGTGVDRIRRMTVWG  185 (327)
T ss_dssp             HHHHHHHHHHHHTCCGGGEECCEEEB
T ss_pred             HHHHHHHHHHHhCcChhheeeeEEEc
Confidence              222233356799999999999987

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.62  E-value=1.1e-15  Score=161.30  Aligned_cols=164  Identities=15%  Similarity=0.121  Sum_probs=106.7

Q ss_pred             CCCCCEEEEEcCCCh-HHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcCC--CCCeeEEEeeCCCccCcchhh--
Q 025619           79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI--  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~-IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~--  148 (250)
                      .+++|++|||||++| ||+++++.|+++|++|++++|+.++     ++++.+++.  +..+..+++|++|.+++++++  
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            378999999999999 9999999999999999999998765     455444333  345678999999998887642  


Q ss_pred             --------hCCCcEEEEcCcC----CCc----CCCCCCCCCCc----ceehHHHHHHHHHHc----c-CCCC---e-EEE
Q 025619          149 --------FEGVTHVICCTGT----TAF----PSRRWDGDNTP----EKVDWEGVRNLVSAL----P-SSLK---R-IVL  199 (250)
Q Consensus       149 --------~~~~D~vi~~Ag~----~~~----~~~~~~~~~~~----~~~N~~g~~~l~~a~----~-~~~~---~-iV~  199 (250)
                              ++++|+||||||.    ...    .....++....    +++|+.++..+++++    + .+.+   . ++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                    4689999999997    111    11122222233    577888888887765    1 2221   2 233


Q ss_pred             EccCcccccCCCCcchhhHHHHHHH-----HHHHHHH-HHhcCCCEEEEecceEE
Q 025619          200 VSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDF-VQKSGLPFTIISLCIYC  248 (250)
Q Consensus       200 iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~-~~~~gi~~~~vrPg~v~  248 (250)
                      .|+..+.      ......|+.+|.     .+.+..+ +...+|+++.+.||++-
T Consensus      2293 ~ss~~g~------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2293 GSPNRGM------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTK 2341 (3089)
T ss_dssp             ECSSTTS------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEE
T ss_pred             CCccccc------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccC
Confidence            3332221      111234655543     1122222 11246999999999985

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.60  E-value=1.3e-15  Score=160.40  Aligned_cols=161  Identities=17%  Similarity=0.116  Sum_probs=110.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHh---hhhCcC--CCCCeeEEEeeCCCccCcchhh-----h
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKAT---TLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----F  149 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~---~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----~  149 (250)
                      .+|+++||||+||||+++++.|+++|++ |++++|+.++.+   +..+++  .+.++.++.+|++|.+++++++     +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            5789999999999999999999999997 888888854322   222111  1346788899999999888654     5


Q ss_pred             CCCcEEEEcCcCCCc---CCCCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAF---PSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~---~~~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|+||||||+...   ...+.+.....+++|+.|+.++.+++.   ...++||++||.++...    ......|+  .
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g----~~g~~~Y~--a 2036 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG----NAGQANYG--F 2036 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT----CTTCHHHH--H
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC----CCCcHHHH--H
Confidence            689999999998642   223344556677999999999877652   23479999999888632    22334555  4


Q ss_pred             HHHHHH---HHHHhcCCCEEEEecceE
Q 025619          224 YKKMGE---DFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       224 ~k~~~e---~~~~~~gi~~~~vrPg~v  247 (250)
                      +|..++   ++.+..|++...+..|.+
T Consensus      2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHCCCcEEEEEccCc
Confidence            455444   445567998888877654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.34  E-value=8.3e-13  Score=112.43  Aligned_cols=105  Identities=16%  Similarity=0.099  Sum_probs=79.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.++.+++.+++.. .++.++.+|++|.++++++ +.++|+|||
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~DvlVn  194 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VKGAHFVFT  194 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TTTCSEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH-HHhCCEEEE
Confidence            35789999999999999999999999999999999998887766543321 2456788999999888864 678999999


Q ss_pred             cCcCCCcC--C--CC-CCCCCCcceehHHHHH
Q 025619          158 CTGTTAFP--S--RR-WDGDNTPEKVDWEGVR  184 (250)
Q Consensus       158 ~Ag~~~~~--~--~~-~~~~~~~~~~N~~g~~  184 (250)
                      |||....+  .  .. .+.....+++|+.++.
T Consensus       195 ~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          195 AGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            99854211  1  11 1333446678887766

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.30  E-value=6.8e-12  Score=91.73  Aligned_cols=74  Identities=20%  Similarity=0.242  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++++|+|+|+ |++|+++++.|.++| ++|++++|++++.+.+.    ..++..+.+|++|.+++.+. +.++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKA-LGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHH-TTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHHH-HcCCCEEEECC
Confidence            4578999999 999999999999999 89999999998887765    34677889999999888865 68999999998


Q ss_pred             c
Q 025619          160 G  160 (250)
Q Consensus       160 g  160 (250)
                      +
T Consensus        78 ~   78 (118)
T 3ic5_A           78 P   78 (118)
T ss_dssp             C
T ss_pred             C
Confidence            5

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.29  E-value=1.5e-11  Score=107.70  Aligned_cols=84  Identities=13%  Similarity=0.033  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHH-HCCCeEEEEecChhhHh------------hhhCcC--CCCCeeEEEeeCCCccCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEKAT------------TLFGKQ--DEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~-~~G~~V~~~~R~~~~~~------------~~~~~~--~~~~~~~v~~Dl~d~~~~  144 (250)
                      ..+|++|||||++|||.+.+..|+ +.|+.++++.++.+..+            ...+..  .+.....+.||++|++++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457999999999999999999998 67999999988654221            111111  145678899999999988


Q ss_pred             chhh------hCCCcEEEEcCcCCC
Q 025619          145 DPAI------FEGVTHVICCTGTTA  163 (250)
Q Consensus       145 ~~~~------~~~~D~vi~~Ag~~~  163 (250)
                      ++.+      ++++|+|||++|...
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEeccccc
Confidence            8754      789999999999764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.06  E-value=2.5e-10  Score=93.36  Aligned_cols=76  Identities=16%  Similarity=0.241  Sum_probs=58.9

Q ss_pred             CCCCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc
Q 025619           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (250)
Q Consensus        79 ~~~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~  142 (250)
                      ++.||+||||||                ||+||.++|++|+++|++|++++++.. ++.      ..++  -.+|+++.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~------~~g~--~~~dv~~~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT------PPFV--KRVDVMTAL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC------CTTE--EEEECCSHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc------CCCC--eEEccCcHH
Confidence            468999999999                699999999999999999999988652 110      1233  357888866


Q ss_pred             Ccchhh---hCCCcEEEEcCcCCC
Q 025619          143 DLDPAI---FEGVTHVICCTGTTA  163 (250)
Q Consensus       143 ~~~~~~---~~~~D~vi~~Ag~~~  163 (250)
                      ++.+++   ++++|++|||||+..
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence            554433   678999999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.97  E-value=2.9e-10  Score=98.59  Aligned_cols=118  Identities=11%  Similarity=0.083  Sum_probs=81.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecC----hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRD----PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~----~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      .++|+||||+|+||.+++..|+.+|.       +|++++++    .++++.....+......+ ..|+....+..++ +.
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~a-l~   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTA-FK   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHH-TT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHH-hC
Confidence            35899999999999999999999885       79999998    554443211111111111 2466666666655 78


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-C-CeEEEEccCc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-L-KRIVLVSSVG  204 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~-~~iV~iSS~~  204 (250)
                      ++|+|||+||....+.   ....+....|+.++..++++++ .+ . .+||++|...
T Consensus        83 ~aD~Vi~~ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv  136 (329)
T 1b8p_A           83 DADVALLVGARPRGPG---MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA  136 (329)
T ss_dssp             TCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             CCCEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence            9999999999754321   1223355789999999999884 32 4 4888888643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.97  E-value=1.1e-09  Score=98.83  Aligned_cols=78  Identities=26%  Similarity=0.200  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|+|+|+| +|++|+++++.|++.|++|++++|+.++++++.+.+  .++..+.+|++|.+++.++ +.++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~--~~~~~~~~Dv~d~~~l~~~-l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV--QHSTPISLDVNDDAALDAE-VAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC--TTEEEEECCTTCHHHHHHH-HTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc--CCceEEEeecCCHHHHHHH-HcCCcEEEECCc
Confidence            468999998 899999999999999999999999998887765443  2467888999998888765 689999999998


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus        78 ~~   79 (450)
T 1ff9_A           78 YT   79 (450)
T ss_dssp             --
T ss_pred             cc
Confidence            64

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.94  E-value=1.6e-09  Score=81.88  Aligned_cols=75  Identities=20%  Similarity=0.173  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++++|+|+|+ |.+|+++++.|.++|++|+++++++++.+.+.+    .+..++.+|.+|++.++++-..++|+||.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EGFDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            4578999997 899999999999999999999999998877653    35778999999998887643568999998764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.93  E-value=1.6e-09  Score=81.56  Aligned_cols=105  Identities=14%  Similarity=0.061  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +++++|+|+|+ |++|+.+++.|.+.|++|++++|++++.+.+.+    .+...+.+|.+|.+.+.++-.+++|+||+++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence            45678999998 999999999999999999999999887765432    2456788999987776653257899999988


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCccc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT  206 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~  206 (250)
                      +..             .+.|..    +.+.+ +.+.+++|..++...+
T Consensus        79 ~~~-------------~~~~~~----~~~~~~~~~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           79 GAN-------------IQASTL----TTLLLKELDIPNIWVKAQNYYH  109 (144)
T ss_dssp             CSC-------------HHHHHH----HHHHHHHTTCSEEEEECCSHHH
T ss_pred             CCc-------------hHHHHH----HHHHHHHcCCCeEEEEeCCHHH
Confidence            631             123432    33333 2355677777665443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.91  E-value=1.4e-09  Score=94.06  Aligned_cols=114  Identities=18%  Similarity=0.184  Sum_probs=77.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHh--hhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~--~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .++|+||||+|++|..++..|+++|  .+|++++++++...  ++.+..  .... +.. +.+..++.++ +.++|+|||
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~--~~~~-v~~-~~~t~d~~~a-l~gaDvVi~   82 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMD--TGAV-VRG-FLGQQQLEAA-LTGMDLIIV   82 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSC--SSCE-EEE-EESHHHHHHH-HTTCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhccc--ccce-EEE-EeCCCCHHHH-cCCCCEEEE
Confidence            3589999999999999999999998  78999998765211  122211  1111 111 2233345544 689999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV  203 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~  203 (250)
                      +||....+.   ....++...|+.++..++++++ .+...+|+++|-
T Consensus        83 ~ag~~~~~g---~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           83 PAGVPRKPG---MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCCCSS---CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cCCcCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            999754222   2234456889999999999884 466667777663

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.90  E-value=5.1e-10  Score=96.36  Aligned_cols=111  Identities=14%  Similarity=0.108  Sum_probs=75.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEec--ChhhHhh----hhCc--CCCCCeeEEEeeCCCc-cCcchhhhCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATT----LFGK--QDEETLQVCKGDTRNP-KDLDPAIFEG  151 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R--~~~~~~~----~~~~--~~~~~~~~v~~Dl~d~-~~~~~~~~~~  151 (250)
                      ++|+||||+|+||.+++..|+.+|.  +++++++  ++++++.    +.+.  .....+     |+++. +++.++ +.+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~d~l~~a-l~g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDA-----NIYVESDENLRI-IDE   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCC-----EEEEEETTCGGG-GTT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCe-----EEEeCCcchHHH-hCC
Confidence            3799999999999999999998885  6888888  6554432    1110  101122     33322 235555 789


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccC
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV  203 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~  203 (250)
                      +|+|||+||....+.   ....+..+.|+.+++.++++++ .+ .++|+++|-
T Consensus        75 aD~Vi~~Ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           75 SDVVIITSGVPRKEG---MSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CSEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CCEEEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            999999999754221   1223456889999999999984 46 767777764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.88  E-value=2.9e-09  Score=87.28  Aligned_cols=76  Identities=20%  Similarity=0.315  Sum_probs=55.1

Q ss_pred             CCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCc
Q 025619           81 SSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL  144 (250)
Q Consensus        81 ~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~  144 (250)
                      +||+||||||                ||++|.++|++++++|++|+++.|+.+. ..   .. ..++.  ..|+.+.+++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~---~~-~~~~~--~~~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP---EP-HPNLS--IREITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC---CC-CTTEE--EEECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc---cC-CCCeE--EEEHhHHHHH
Confidence            5789999999                8999999999999999999999997532 11   00 12343  3455554443


Q ss_pred             chhh---hCCCcEEEEcCcCCC
Q 025619          145 DPAI---FEGVTHVICCTGTTA  163 (250)
Q Consensus       145 ~~~~---~~~~D~vi~~Ag~~~  163 (250)
                      .+++   ++++|++|||||+..
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHhcCCCCEEEEcCcccc
Confidence            3332   678999999999865

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.88  E-value=1.2e-09  Score=97.30  Aligned_cols=79  Identities=18%  Similarity=0.169  Sum_probs=65.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC---CeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhhhCC--Cc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEG--VT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G---~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~~~~--~D  153 (250)
                      |++|+|+|| |+||+++++.|+++|   .+|++++|+.++++++.+.+.   ..++..+.+|++|.++++++ +.+  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~-l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL-INEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH-HHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH-HHhhCCC
Confidence            368999998 999999999999998   389999999998887665432   13588899999999999875 454  99


Q ss_pred             EEEEcCcCC
Q 025619          154 HVICCTGTT  162 (250)
Q Consensus       154 ~vi~~Ag~~  162 (250)
                      +|||||+..
T Consensus        79 vVin~ag~~   87 (405)
T 4ina_A           79 IVLNIALPY   87 (405)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCCcc
Confidence            999999753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.81  E-value=7.1e-09  Score=88.78  Aligned_cols=110  Identities=16%  Similarity=0.146  Sum_probs=74.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEec--ChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R--~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++|+||||+|++|..++..|+.+|.  +++++++  ++++++....++.     ..++.+. .|     + .++ +.+.|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~-~~-----~-~~a-~~~aD   72 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR-QG-----G-YED-TAGSD   72 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE-EC-----C-GGG-GTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE-eC-----C-HHH-hCCCC
Confidence            3799999999999999999999885  6888888  7665433211110     1222322 21     1 333 68899


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccC
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV  203 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~  203 (250)
                      +|||+||....+..   ...+....|+.+++.++++++ .+...+|+++|-
T Consensus        73 vVi~~ag~~~~~g~---~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           73 VVVITAGIPRQPGQ---TRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             EEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             EEEEcCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999997542211   223356889999999999884 456667777664

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.80  E-value=4.9e-09  Score=94.87  Aligned_cols=79  Identities=24%  Similarity=0.220  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+|+|+|| |++|+++++.|++. |++|++++|+.++++++.+.   .++..+.+|++|.+++.++ +.++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~~~~~~~~D~~d~~~l~~~-l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---SGSKAISLDVTDDSALDKV-LADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---GTCEEEECCTTCHHHHHHH-HHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---cCCcEEEEecCCHHHHHHH-HcCCCEEEE
Confidence            467789999997 99999999999998 78999999999988776643   2466778999998888765 678999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +++..
T Consensus        95 ~tp~~   99 (467)
T 2axq_A           95 LIPYT   99 (467)
T ss_dssp             CSCGG
T ss_pred             CCchh
Confidence            99864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.71  E-value=2.4e-08  Score=79.73  Aligned_cols=99  Identities=19%  Similarity=0.205  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi  156 (250)
                      .+++|+||||+|+||.++++.+...|++|++++|++++.+.+.+.    +.. ...|.++.+..+...  .  +++|+||
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GVE-YVGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CCS-EEEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC-EEeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            578999999999999999999999999999999998877655431    222 235877654333211  2  3699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +|+|..                   .....++.++.+ +++|.+++..
T Consensus       113 ~~~g~~-------------------~~~~~~~~l~~~-G~~v~~g~~~  140 (198)
T 1pqw_A          113 NSLAGE-------------------AIQRGVQILAPG-GRFIELGKKD  140 (198)
T ss_dssp             ECCCTH-------------------HHHHHHHTEEEE-EEEEECSCGG
T ss_pred             ECCchH-------------------HHHHHHHHhccC-CEEEEEcCCC
Confidence            998621                   123455566554 6899988765

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.67  E-value=5e-08  Score=72.97  Aligned_cols=75  Identities=25%  Similarity=0.275  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +++|+|+|+ |.+|..+++.|.+.|++|++++|++++.+.+.+.   .++.++.+|.++.+.+.++...++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            358999986 9999999999999999999999999887665432   24567788998877665433568999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.66  E-value=4.5e-08  Score=82.37  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=57.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+.+.... .   +|..+.+++.+   +++|+|||+
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~---~~~~~~~~~~~---~~~DivVn~  187 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-S---IQALSMDELEG---HEFDLIINA  187 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-S---EEECCSGGGTT---CCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-C---eeEecHHHhcc---CCCCEEEEC
Confidence            357889999998 899999999999999999999999988877765432111 1   23333333331   589999999


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      ++...
T Consensus       188 t~~~~  192 (271)
T 1nyt_A          188 TSSGI  192 (271)
T ss_dssp             CSCGG
T ss_pred             CCCCC
Confidence            98754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.66  E-value=5.5e-08  Score=74.55  Aligned_cols=78  Identities=13%  Similarity=0.163  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ..++++|.|+ |.+|+.+++.|.+.|++|++++++ +++.+.+.+.. ..++.++.+|.+|++.++++-+++.|.||.+.
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            3467999995 999999999999999999999997 45444433211 23678999999999888765467899999876


Q ss_pred             c
Q 025619          160 G  160 (250)
Q Consensus       160 g  160 (250)
                      +
T Consensus        80 ~   80 (153)
T 1id1_A           80 D   80 (153)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.61  E-value=1.2e-07  Score=81.94  Aligned_cols=75  Identities=20%  Similarity=0.186  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      .+++||||||+|+||..+++.+...|++|++++|++++.+.+. .+   +.. ..+|.++.+++.+.+    -+++|++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~---g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QI---GFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---TCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            5789999999999999999999999999999999988877653 22   121 236888745544332    14799999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      +|+|
T Consensus       220 ~~~g  223 (333)
T 1v3u_A          220 DNVG  223 (333)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9997

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.57  E-value=1.9e-07  Score=71.72  Aligned_cols=78  Identities=19%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ...+++|+|.|+ |.+|..+++.|.+.|++|++++|++++.+.+.+   ..+...+.+|.++.+.+.++-..++|+||.+
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            346679999995 999999999999999999999999988765431   2245677789888766654324679999998


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .+
T Consensus        92 ~~   93 (155)
T 2g1u_A           92 TN   93 (155)
T ss_dssp             SS
T ss_pred             eC
Confidence            75

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.50  E-value=1.7e-07  Score=80.40  Aligned_cols=82  Identities=13%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---hhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~---~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++.. ....+...++.+.+++.+. ..+.|
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~-l~~aD  228 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE-IAESV  228 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHTCS
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh-hcCCC
Confidence            467899999997 8999999999999998 89999999   7787776544321 1234445677766666643 57899


Q ss_pred             EEEEcCcCC
Q 025619          154 HVICCTGTT  162 (250)
Q Consensus       154 ~vi~~Ag~~  162 (250)
                      +|||+....
T Consensus       229 iIINaTp~G  237 (315)
T 3tnl_A          229 IFTNATGVG  237 (315)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECccCC
Confidence            999987643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.50  E-value=3.2e-07  Score=69.25  Aligned_cols=74  Identities=20%  Similarity=0.256  Sum_probs=62.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .++|+|.|+ |.+|..+++.|.+.|++|+++++++++.+.+.+    .++.++.+|.+|++.++++-..+.|+||.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            357899996 999999999999999999999999998877653    36788999999998887643568999998754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.50  E-value=5.8e-08  Score=84.06  Aligned_cols=116  Identities=17%  Similarity=0.151  Sum_probs=75.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEecCh--hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--K-----SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~-----V~~~~R~~--~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++|.||||+|+||++++..|+..|.  +     ++++++++  ++++....++.+....+. .++...++..++ +.++|
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~-~~daD   81 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIA-FKDLD   81 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHH-TTTCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHH-hCCCC
Confidence            4899999999999999999998875  5     89999864  233322211111111111 122222333433 68999


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC--eEEEEccC
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK--RIVLVSSV  203 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~--~iV~iSS~  203 (250)
                      +||+.||....+.+   ...+.++.|+..++.++++++ .+.+  +++.+|..
T Consensus        82 vVvitAg~prkpG~---tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           82 VAILVGSMPRRDGM---ERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             EEEECCSCCCCTTC---CTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             EEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence            99999997653322   345567899999999999884 3433  57777654

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.50  E-value=6.4e-08  Score=88.83  Aligned_cols=75  Identities=23%  Similarity=0.164  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+++|+++|||| ||+|++++..|++.|++|++++|+.++++++.+.+. ..+    .++.|   +.+.....+|+||||
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-~~~----~~~~d---l~~~~~~~~DilVN~  431 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-GKA----LSLTD---LDNYHPEDGMVLANT  431 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-C-C----EETTT---TTTC--CCSEEEEEC
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-Cce----eeHHH---hhhccccCceEEEEC
Confidence            357889999999 699999999999999999999999998887765542 111    23332   332112458999999


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      +|..
T Consensus       432 agvg  435 (523)
T 2o7s_A          432 TSMG  435 (523)
T ss_dssp             SSTT
T ss_pred             CCCC
Confidence            9974

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.49  E-value=2.9e-08  Score=84.22  Aligned_cols=79  Identities=22%  Similarity=0.231  Sum_probs=57.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCC---CeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE---TLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~---~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++.+|+++|||++ |+|+++++.|+++| +|++++|+.++++++.+++...   .. .+.+|++|.   .+. ++++|+|
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~-~~~~Dil  197 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVD-LDGVDII  197 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCC-CTTCCEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHh-hCCCCEE
Confidence            3578999999986 99999999999999 9999999998877765432110   10 123455442   322 5789999


Q ss_pred             EEcCcCCCc
Q 025619          156 ICCTGTTAF  164 (250)
Q Consensus       156 i~~Ag~~~~  164 (250)
                      |||++....
T Consensus       198 Vn~ag~~~~  206 (287)
T 1nvt_A          198 INATPIGMY  206 (287)
T ss_dssp             EECSCTTCT
T ss_pred             EECCCCCCC
Confidence            999997653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.48  E-value=1.7e-07  Score=82.33  Aligned_cols=108  Identities=16%  Similarity=0.122  Sum_probs=72.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+++|+|+|+ |+||+.+++.+...|++|++++|++++++.+.+... ..   +.+|.++.+++++. ++++|+||++
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-~~---~~~~~~~~~~l~~~-~~~~DvVi~~  236 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-GR---VITLTATEANIKKS-VQHADLLIGA  236 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TS---EEEEECCHHHHHHH-HHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-ce---EEEecCCHHHHHHH-HhCCCEEEEC
Confidence            467899999999 999999999999999999999999988766543221 12   45777777777764 6789999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      ++.....     .+.   -+    +...++.++++ +.||++|+..+
T Consensus       237 ~g~~~~~-----~~~---li----~~~~l~~mk~g-g~iV~v~~~~g  270 (369)
T 2eez_A          237 VLVPGAK-----APK---LV----TRDMLSLMKEG-AVIVDVAVDQG  270 (369)
T ss_dssp             CC------------C---CS----CHHHHTTSCTT-CEEEECC----
T ss_pred             CCCCccc-----cch---hH----HHHHHHhhcCC-CEEEEEecCCC
Confidence            9864210     000   01    12344555543 68888887643

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.48  E-value=2.8e-07  Score=80.76  Aligned_cols=72  Identities=19%  Similarity=0.145  Sum_probs=60.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                      |+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++++.+.     ..+..+.+|+.|.+++.++ +++.|+||++++..
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-----~~~~~~~~d~~d~~~l~~~-~~~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-----EFATPLKVDASNFDKLVEV-MKEFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-----TTSEEEECCTTCHHHHHHH-HTTCSEEEECCCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-----ccCCcEEEecCCHHHHHHH-HhCCCEEEEecCCc
Confidence            57999998 9999999998865 589999999998887764     3456788999999999875 78999999998653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.47  E-value=4.5e-07  Score=78.55  Aligned_cols=76  Identities=24%  Similarity=0.163  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh----CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF----EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~----~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|++++|++++++.+.+.+.   .. ...|.++.+++.+.+.    +++|++|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g---~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  230 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG---FD-DAFNYKEESDLTAALKRCFPNGIDIYF  230 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC---CS-EEEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---Cc-eEEecCCHHHHHHHHHHHhCCCCcEEE
Confidence            57899999999999999999999999999999999988776653332   22 2358777655544331    3699999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      +|+|
T Consensus       231 ~~~g  234 (345)
T 2j3h_A          231 ENVG  234 (345)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9987

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.47  E-value=3.5e-07  Score=79.44  Aligned_cols=76  Identities=20%  Similarity=0.166  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+.+.+ +   +.. ...|+++.+++.+.+    -+++|+||
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~---g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-I---GGE-VFIDFTKEKDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-T---TCC-EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-c---CCc-eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence            57899999999999999999999999999999999887765432 2   222 235888666655433    13799999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      +++|.
T Consensus       244 ~~~g~  248 (347)
T 2hcy_A          244 NVSVS  248 (347)
T ss_dssp             ECSSC
T ss_pred             ECCCc
Confidence            99974

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.40  E-value=4.6e-07  Score=71.33  Aligned_cols=77  Identities=22%  Similarity=0.163  Sum_probs=62.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh-hhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA-IFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~-~~~~~D~vi  156 (250)
                      ++.+++|+|.| .|.+|..+++.|.+. |++|+++++++++.+.+.+    .++.++.+|.+|.+.+.++ -..++|+||
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            34567899998 599999999999999 9999999999988776542    2567788999988766643 246899999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.39  E-value=3.9e-07  Score=73.88  Aligned_cols=74  Identities=22%  Similarity=0.228  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+|+|.|+ |.+|+++++.|.++|++|+++++++++.+.+.+.   .+..++.+|.+|++.++++-..+.|+||.+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            36999996 9999999999999999999999999988775432   25778999999998888654678999997653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=3.6e-07  Score=78.63  Aligned_cols=99  Identities=14%  Similarity=0.071  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi  156 (250)
                      .+++||||||+|+||..+++.+...|++|++++|++++.+.+.+ +   +.. ...|.++.+..++..  .  +++|++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~-~~~~~~~~~~~~~~~~~~~~~~~D~vi  214 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAW-QVINYREEDLVERLKEITGGKKVRVVY  214 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC-EEEECCCccHHHHHHHHhCCCCceEEE
Confidence            57899999999999999999999999999999999887766543 2   111 235777654433211  1  3699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +|+| ..                  .....++.++.+ +++|.+++..
T Consensus       215 ~~~g-~~------------------~~~~~~~~l~~~-G~iv~~g~~~  242 (327)
T 1qor_A          215 DSVG-RD------------------TWERSLDCLQRR-GLMVSFGNSS  242 (327)
T ss_dssp             ECSC-GG------------------GHHHHHHTEEEE-EEEEECCCTT
T ss_pred             ECCc-hH------------------HHHHHHHHhcCC-CEEEEEecCC
Confidence            9998 21                  023345555543 5888887654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.37  E-value=7.7e-07  Score=77.52  Aligned_cols=73  Identities=15%  Similarity=0.128  Sum_probs=55.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi~  157 (250)
                      ++||||||+|+||..+++.+...|+ +|+++++++++.+.+.+.+.   .. ..+|..+.+..+ .+    -+++|++|+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g---~~-~~~d~~~~~~~~-~~~~~~~~~~d~vi~  236 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG---FD-AAINYKKDNVAE-QLRESCPAGVDVYFD  236 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC---CS-EEEETTTSCHHH-HHHHHCTTCEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---Cc-eEEecCchHHHH-HHHHhcCCCCCEEEE
Confidence            8999999999999999999999999 99999999888776654332   22 236777643222 22    136999999


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      |+|
T Consensus       237 ~~G  239 (357)
T 2zb4_A          237 NVG  239 (357)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            997

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.35  E-value=7.1e-07  Score=77.00  Aligned_cols=76  Identities=18%  Similarity=0.136  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi  156 (250)
                      .+++|+||||+|+||..+++.+...|++|++++|++++.+.+.+ + +  .. ...|.++.+..++..  .  +++|++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~-g--~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L-G--CH-HTINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H-T--CS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-C--CC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            57899999999999999999999999999999999887766543 2 1  11 235777654333211  2  3699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      +|+|.
T Consensus       220 ~~~g~  224 (333)
T 1wly_A          220 DSIGK  224 (333)
T ss_dssp             ECSCT
T ss_pred             ECCcH
Confidence            99984

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.34  E-value=8.8e-07  Score=77.11  Aligned_cols=75  Identities=20%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hh--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~--~~~D~vi  156 (250)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++.+.+.+ +   +.. ...|..+.+..++.  ..  +++|+||
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-N---GAH-EVFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-c---CCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            57899999999999999999999999999999999988775432 2   122 23577665433321  12  2699999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      +|+|
T Consensus       245 ~~~G  248 (351)
T 1yb5_A          245 EMLA  248 (351)
T ss_dssp             ESCH
T ss_pred             ECCC
Confidence            9997

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.34  E-value=7.9e-07  Score=76.74  Aligned_cols=101  Identities=16%  Similarity=0.192  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~~~~D~vi~  157 (250)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+.+.+.+   +.. ...|..+.+..+.   ...+++|++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFD-GAIDYKNEDLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCS-EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCC-EEEECCCHHHHHHHHHhcCCCceEEEE
Confidence            5789999999999999999999999999999999998887763333   222 2357666443322   11246999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      |+|..                   .....++.++.+ +++|.++....
T Consensus       225 ~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~~  252 (336)
T 4b7c_A          225 NVGGE-------------------ILDTVLTRIAFK-ARIVLCGAISQ  252 (336)
T ss_dssp             SSCHH-------------------HHHHHHTTEEEE-EEEEECCCGGG
T ss_pred             CCCcc-------------------hHHHHHHHHhhC-CEEEEEeeccc
Confidence            99731                   122334444443 68888876553

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.32  E-value=9.6e-07  Score=74.25  Aligned_cols=77  Identities=19%  Similarity=0.169  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+.+.... .+...|+   +++.+   ++.|+|||+
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~~~~---~~~~~---~~~DivIn~  187 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSM---DSIPL---QTYDLVINA  187 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEG---GGCCC---SCCSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEEeeH---HHhcc---CCCCEEEEC
Confidence            357889999997 899999999999999999999999988877764432110 1112333   22211   478999999


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      ++...
T Consensus       188 t~~~~  192 (272)
T 1p77_A          188 TSAGL  192 (272)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.30  E-value=1.3e-06  Score=76.18  Aligned_cols=76  Identities=14%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi  156 (250)
                      .+++|+|+||+|+||..+++.+...|++|++++|++++++.+.+ +   +.. ...|..+.+..++..  .  +++|++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK-L---GAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-H---TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            57899999999999999999999999999999999988776532 2   121 235776654333211  2  3699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      +|+|.
T Consensus       237 ~~~G~  241 (354)
T 2j8z_A          237 DCIGG  241 (354)
T ss_dssp             ESSCG
T ss_pred             ECCCc
Confidence            99984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.23  E-value=2.3e-06  Score=73.41  Aligned_cols=112  Identities=19%  Similarity=0.197  Sum_probs=72.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC---ccCcchhhhCCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN---PKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d---~~~~~~~~~~~~D~vi~  157 (250)
                      ++|.|+||+|++|..++..|+..|  .+|+++++++.+..  ..++.....   .+++..   ..+.+++ +.+.|+||+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~--a~dL~~~~~---~~~l~~~~~t~d~~~a-~~~aDvVvi   74 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET---RATVKGYLGPEQLPDC-LKGCDVVVI   74 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS---SCEEEEEESGGGHHHH-HTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHH--HHHHhccCc---CceEEEecCCCCHHHH-hCCCCEEEE
Confidence            379999999999999999999988  68999999872211  111111110   012221   1345444 689999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEccC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSV  203 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS~  203 (250)
                      +||....+..   ...+....|+.....+++.++ . ...++|++|-.
T Consensus        75 ~ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP  119 (314)
T 1mld_A           75 PAGVPRKPGM---TRDDLFNTNATIVATLTAACAQHCPDAMICIISNP  119 (314)
T ss_dssp             CCSCCCCTTC---CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             CCCcCCCCCC---cHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence            9997643321   223455789999999988773 2 23477776543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.23  E-value=1.6e-06  Score=73.40  Aligned_cols=79  Identities=20%  Similarity=0.269  Sum_probs=58.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+.  ...+.+...+.   +++.+. ..+.|+|
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~-l~~~DiV  198 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDV-IAAADGV  198 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHH-HHHSSEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHH-HhcCCEE
Confidence            467899999997 8999999999999998 69999999998887755432  11233333443   345443 5678999


Q ss_pred             EEcCcCC
Q 025619          156 ICCTGTT  162 (250)
Q Consensus       156 i~~Ag~~  162 (250)
                      ||+....
T Consensus       199 InaTp~G  205 (283)
T 3jyo_A          199 VNATPMG  205 (283)
T ss_dssp             EECSSTT
T ss_pred             EECCCCC
Confidence            9987643

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.21  E-value=1.7e-06  Score=73.67  Aligned_cols=78  Identities=24%  Similarity=0.239  Sum_probs=57.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+++|+|+ |++|++++..|++.|+ +|++++|++++++++.+.+....-.+  .   +.+++.+. +++.|+||+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~--~---~~~~~~~~-~~~aDivIn  210 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY--F---SLAEAETR-LAEYDIIIN  210 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE--E---CHHHHHHT-GGGCSEEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce--e---eHHHHHhh-hccCCEEEE
Confidence            357889999997 8999999999999998 89999999998887765542210011  1   12234433 578999999


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +++...
T Consensus       211 ~t~~~~  216 (297)
T 2egg_A          211 TTSVGM  216 (297)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.21  E-value=1.8e-06  Score=73.94  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC---hhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~---~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+++. ..+..+...+..+.+.+.+. ..+.|
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~-l~~~D  222 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA-LASAD  222 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHHCS
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh-ccCce
Confidence            457899999997 9999999999999998 79999999   777777654332 11233344565553222332 46789


Q ss_pred             EEEEcCcCC
Q 025619          154 HVICCTGTT  162 (250)
Q Consensus       154 ~vi~~Ag~~  162 (250)
                      +|||+....
T Consensus       223 iIINaTp~G  231 (312)
T 3t4e_A          223 ILTNGTKVG  231 (312)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCcCC
Confidence            999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.19  E-value=3.3e-06  Score=73.20  Aligned_cols=76  Identities=17%  Similarity=0.136  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhhh-CCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~-~~~D~v  155 (250)
                      .+++|||+||+|+||..+++.+... |++|+++++++++.+.+.+ + +  .. ...|..+.+.   +.+..- +++|++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~-g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-G--AD-YVINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-T--CS-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h-C--CC-EEecCCCccHHHHHHHHhcCCCceEE
Confidence            5789999999999999999999998 9999999999888766543 2 1  11 2347766443   222212 579999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |+++|.
T Consensus       245 i~~~g~  250 (347)
T 1jvb_A          245 IDLNNS  250 (347)
T ss_dssp             EESCCC
T ss_pred             EECCCC
Confidence            999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.15  E-value=2.7e-06  Score=73.65  Aligned_cols=75  Identities=15%  Similarity=0.062  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhh-hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI-FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~-~~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|++++|++++.+.+.+ +   +... ..|.++.+.   +.+.. -+++|++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-L---GADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c---CCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            57899999999999999999999999999999999888776543 2   1221 257776432   22111 13699999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      +++|
T Consensus       241 ~~~g  244 (343)
T 2eih_A          241 DHTG  244 (343)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=98.14  E-value=6.5e-06  Score=69.18  Aligned_cols=75  Identities=21%  Similarity=0.276  Sum_probs=55.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++....+..  .++.   ++..   .+.|+|||
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~~~---~l~~---~~~DivIn  187 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SRYE---ALEG---QSFDIVVN  187 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--ECSG---GGTT---CCCSEEEE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--eeHH---Hhcc---cCCCEEEE
Confidence            467899999997 8999999999999996 89999999999888766543222322  2222   2221   56899999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +....
T Consensus       188 aTp~g  192 (272)
T 3pwz_A          188 ATSAS  192 (272)
T ss_dssp             CSSGG
T ss_pred             CCCCC
Confidence            87543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.10  E-value=1.2e-06  Score=75.96  Aligned_cols=117  Identities=9%  Similarity=0.039  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +.+++|.|+|++|+||..++..++.+|.  +|+++++++++++....++.+....  ..++.-..+..++ +.+.|+||.
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~--~~~i~~t~d~~~a-l~dADvVvi   82 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE--GLNLTFTSDIKEA-LTDAKYIVS   82 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT--TCCCEEESCHHHH-HTTEEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC--CCceEEcCCHHHH-hCCCCEEEE
Confidence            3567999999999999999999999984  8999999987765422111110000  0111112334333 688999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-C-eEEEEcc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-K-RIVLVSS  202 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~-~iV~iSS  202 (250)
                      +||....+.+   ...+..+.|....+.+.+.+. ... . .++.+|.
T Consensus        83 taG~p~kpG~---~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           83 SGGAPRKEGM---TREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             CCC----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             ccCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9997543221   223345778888888888773 232 3 3556654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.10  E-value=2.3e-06  Score=74.44  Aligned_cols=76  Identities=14%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~~~~D~vi~  157 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+.    +.. ...|..+.+..+.   ...+++|++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~-~~~~~~~~~~~~~~~~~~~~g~Dvvid  241 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK-RGINYRSEDFAAVIKAETGQGVDIILD  241 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC-EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence            578999999999999999999999999999999999887765432    111 1246655433221   11247999999


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      ++|.
T Consensus       242 ~~g~  245 (353)
T 4dup_A          242 MIGA  245 (353)
T ss_dssp             SCCG
T ss_pred             CCCH
Confidence            9974

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.08  E-value=7.3e-06  Score=69.19  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|++++|++++.+++.+.+.. ..+...  ++.+   +.    .+.|+||
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l~----~~aDiII  192 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---LK----QSYDVII  192 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---CC----SCEEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---hc----CCCCEEE
Confidence            457899999997 8999999999999996 899999999988877654321 123322  2222   21    4689999


Q ss_pred             EcCcCC
Q 025619          157 CCTGTT  162 (250)
Q Consensus       157 ~~Ag~~  162 (250)
                      |+....
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            987653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.08  E-value=6e-06  Score=71.16  Aligned_cols=99  Identities=16%  Similarity=0.154  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hh--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~--~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +.. ...|..+.+..++.  ..  +++|++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~-~~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-Y---GAE-YLINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCc-EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence            57899999999999999999999999999999999988775543 2   121 23466554333221  11  3699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +++|...                   ....++.++.+ +++|.++...
T Consensus       223 d~~g~~~-------------------~~~~~~~l~~~-G~iv~~G~~~  250 (334)
T 3qwb_A          223 DSVGKDT-------------------FEISLAALKRK-GVFVSFGNAS  250 (334)
T ss_dssp             ECCGGGG-------------------HHHHHHHEEEE-EEEEECCCTT
T ss_pred             ECCChHH-------------------HHHHHHHhccC-CEEEEEcCCC
Confidence            9998411                   22345555544 5788877543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.07  E-value=1.8e-06  Score=65.29  Aligned_cols=71  Identities=14%  Similarity=0.195  Sum_probs=53.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +++|+|.|+ |++|+.+++.|.+.|++|++++|++++.+.+.+.+.   ...     ...+++.+. +.+.|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~-----~~~~~~~~~-~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEY-----VLINDIDSL-IKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEE-----EECSCHHHH-HHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cce-----EeecCHHHH-hcCCCEEEEeCCC
Confidence            679999996 999999999999999999999999998877654432   221     122344443 5789999998865


Q ss_pred             C
Q 025619          162 T  162 (250)
Q Consensus       162 ~  162 (250)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.06  E-value=3.6e-06  Score=68.81  Aligned_cols=72  Identities=19%  Similarity=0.190  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .++++|.|+ |.+|+.+++.|.+.|+ |+++++++++.+.+.     .++.++.+|.+|++.++++-+.+.|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            358999997 9999999999999999 999999988876654     25788999999998887654678999998753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.05  E-value=1.5e-06  Score=67.01  Aligned_cols=71  Identities=13%  Similarity=0.050  Sum_probs=51.0

Q ss_pred             CChHHHHHHHHHHHCCCeEEEEecChhhHhh---hhCcC--CCCCeeEEEeeCCCc--cCcchhh------hCCCcEEEE
Q 025619           91 SGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQ--DEETLQVCKGDTRNP--KDLDPAI------FEGVTHVIC  157 (250)
Q Consensus        91 sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~---~~~~~--~~~~~~~v~~Dl~d~--~~~~~~~------~~~~D~vi~  157 (250)
                      +|.++.+.++.|++.|++|++..|+.+..+.   ..+.+  .+..+..+++|++++  +++++++      +++ |++||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            3568899999999999999999886543221   11111  134566788999998  7877643      467 99999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      |||..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.04  E-value=5e-06  Score=71.39  Aligned_cols=76  Identities=18%  Similarity=0.129  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--h--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~--~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +.. ...|..+.+..++..  .  +++|++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~-~~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-L---GAW-ETIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCC-EEEeCCCccHHHHHHHHhCCCCceEEE
Confidence            57899999999999999999998899999999999988776543 2   111 234665544332211  2  3699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      +++|.
T Consensus       215 d~~g~  219 (325)
T 3jyn_A          215 DGVGQ  219 (325)
T ss_dssp             ESSCG
T ss_pred             ECCCh
Confidence            99984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.03  E-value=8.7e-06  Score=71.09  Aligned_cols=73  Identities=16%  Similarity=0.193  Sum_probs=54.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~  152 (250)
                      .+++++|||+|| |+||..+++.+...|++|+++++++   ++.+.+.+ +   ++..+  | .+  ++.+.+   .+++
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~---ga~~v--~-~~--~~~~~~~~~~~~~  247 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-T---KTNYY--N-SS--NGYDKLKDSVGKF  247 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-H---TCEEE--E-CT--TCSHHHHHHHCCE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-h---CCcee--c-hH--HHHHHHHHhCCCC
Confidence            356899999999 9999999999988999999999988   77654432 2   34444  6 55  333222   2579


Q ss_pred             cEEEEcCcC
Q 025619          153 THVICCTGT  161 (250)
Q Consensus       153 D~vi~~Ag~  161 (250)
                      |+||+++|.
T Consensus       248 d~vid~~g~  256 (366)
T 2cdc_A          248 DVIIDATGA  256 (366)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.01  E-value=3.5e-06  Score=73.68  Aligned_cols=77  Identities=14%  Similarity=0.127  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.+++|+|+|+ |++|+.+++.+...|++|++++|++++++.+.+... ..+.   .+..+.+++.+. +.++|+||+++
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-~~~~---~~~~~~~~~~~~-~~~~DvVI~~~  238 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVE---LLYSNSAEIETA-VAEADLLIGAV  238 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSE---EEECCHHHHHHH-HHTCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-ceeE---eeeCCHHHHHHH-HcCCCEEEECC
Confidence            56689999998 999999999999999999999999988776643221 1221   122233445443 56899999999


Q ss_pred             cCC
Q 025619          160 GTT  162 (250)
Q Consensus       160 g~~  162 (250)
                      +..
T Consensus       239 ~~~  241 (361)
T 1pjc_A          239 LVP  241 (361)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            764

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.98  E-value=1.3e-06  Score=70.22  Aligned_cols=73  Identities=16%  Similarity=0.115  Sum_probs=50.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|+|+||+|.+|+++++.|++.|++|++++|++++.+.+.+.... .+.  ..|+. .+++.++ ++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~~~-~~~~~~~-~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAG--DASIT-GMKNEDA-AEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHS--SCCEE-EEEHHHH-HHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccc--cCCCC-hhhHHHH-HhcCCEEEEeCC
Confidence            3799999999999999999999999999999998877665432100 000  01121 1234433 567899999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.97  E-value=8.9e-06  Score=71.53  Aligned_cols=106  Identities=15%  Similarity=0.092  Sum_probs=71.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+++|+|+|+ |+||+.+++.+...|++|++++|++++++.+.+.. +..+   ..|..+.+++.+. +++.|+||++
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-g~~~---~~~~~~~~~l~~~-l~~aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-CGRI---HTRYSSAYELEGA-VKRADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-TTSS---EEEECCHHHHHHH-HHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-CCee---EeccCCHHHHHHH-HcCCCEEEEC
Confidence            467899999998 99999999999999999999999998876654322 1222   2333444556544 5789999998


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      ++....     ..+. .  ++    ...++.++++ +.||.+|+.
T Consensus       239 ~~~p~~-----~t~~-l--i~----~~~l~~mk~g-~~iV~va~~  270 (377)
T 2vhw_A          239 VLVPGA-----KAPK-L--VS----NSLVAHMKPG-AVLVDIAID  270 (377)
T ss_dssp             CCCTTS-----CCCC-C--BC----HHHHTTSCTT-CEEEEGGGG
T ss_pred             CCcCCC-----CCcc-e--ec----HHHHhcCCCC-cEEEEEecC
Confidence            875421     0111 1  11    2344455544 678888854

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.96  E-value=9.2e-06  Score=70.30  Aligned_cols=74  Identities=19%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h-C-CCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-E-GVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~-~-~~D~v  155 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+.  +.. .+  .|..  +++.+.+   . + ++|++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--ga~-~v--~~~~--~~~~~~v~~~~~~~g~Dvv  231 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV--GAD-IV--LPLE--EGWAKAVREATGGAGVDMV  231 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--TCS-EE--EESS--TTHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--CCc-EE--ecCc--hhHHHHHHHHhCCCCceEE
Confidence            578999999999999999999999999999999998887665432  111 12  3443  2232222   2 2 69999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |+++|.
T Consensus       232 id~~g~  237 (342)
T 4eye_A          232 VDPIGG  237 (342)
T ss_dssp             EESCC-
T ss_pred             EECCch
Confidence            999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.94  E-value=7.4e-06  Score=69.55  Aligned_cols=74  Identities=16%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|+|+||+|++|..+++.+...|++|+++++++++.+.+.+ +   +... ..|..+.+++.+. .+++|++|+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~-~~~~~~~~~~~~~-~~~~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L---GAEE-AATYAEVPERAKA-WGGLDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T---TCSE-EEEGGGHHHHHHH-TTSEEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-c---CCCE-EEECCcchhHHHH-hcCceEEEE-CC
Confidence            46799999999999999999998999999999999887765543 2   2221 2455441223323 378999999 87


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       198 ~  198 (302)
T 1iz0_A          198 G  198 (302)
T ss_dssp             C
T ss_pred             H
Confidence            3

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.94  E-value=5.1e-06  Score=71.81  Aligned_cols=100  Identities=14%  Similarity=0.144  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hh--CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~--~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+.    +.. ...|..+.+..++.  ..  +++|++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~-~~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA-YVIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc-EEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            578999999999999999998888999999999998887765432    121 12466554332221  11  3799999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      +|+|...                   ....++.++.+ +++|.++....
T Consensus       219 d~~g~~~-------------------~~~~~~~l~~~-G~iv~~G~~~~  247 (340)
T 3gms_A          219 DSIGGPD-------------------GNELAFSLRPN-GHFLTIGLLSG  247 (340)
T ss_dssp             ESSCHHH-------------------HHHHHHTEEEE-EEEEECCCTTS
T ss_pred             ECCCChh-------------------HHHHHHHhcCC-CEEEEEeecCC
Confidence            9997421                   12234555544 68888876543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.93  E-value=2.3e-05  Score=68.40  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+|+ |+||..+++.+...|++|+++++++++.+.+.+.+.   .. ...|..+.+.+.+. .+++|+||+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG---a~-~v~~~~~~~~~~~~-~~~~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG---AD-SFLVSRDQEQMQAA-AGTLDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC---CS-EEEETTCHHHHHHT-TTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---Cc-eEEeccCHHHHHHh-hCCCCEEEECCC
Confidence            5789999996 999999999998999999999999888766543332   22 13476666556543 468999999998


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       261 ~  261 (366)
T 1yqd_A          261 A  261 (366)
T ss_dssp             S
T ss_pred             c
Confidence            5

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.92  E-value=7e-06  Score=71.65  Aligned_cols=99  Identities=20%  Similarity=0.228  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~-~~~D~vi  156 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +... ..|..+.+ +.+.+   . +++|++|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~~-~~~~~~~~-~~~~~~~~~~~g~D~vi  236 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L---GCDR-PINYKTEP-VGTVLKQEYPEGVDVVY  236 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSE-EEETTTSC-HHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c---CCcE-EEecCChh-HHHHHHHhcCCCCCEEE
Confidence            57899999999999999999999999999999999888776543 2   2221 24555432 22222   1 3699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      +++|..                   .....++.++.+ +++|.+++...
T Consensus       237 d~~g~~-------------------~~~~~~~~l~~~-G~iv~~g~~~~  265 (362)
T 2c0c_A          237 ESVGGA-------------------MFDLAVDALATK-GRLIVIGFISG  265 (362)
T ss_dssp             ECSCTH-------------------HHHHHHHHEEEE-EEEEECCCGGG
T ss_pred             ECCCHH-------------------HHHHHHHHHhcC-CEEEEEeCCCC
Confidence            998731                   123455555543 58888876543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.89  E-value=3.2e-05  Score=66.02  Aligned_cols=84  Identities=15%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             CCCCE-EEEEc-CC-----------------ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--------------
Q 025619           80 SSSKL-VLVAG-GS-----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------------  126 (250)
Q Consensus        80 ~~~k~-vlVTG-as-----------------G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--------------  126 (250)
                      +.||+ ||||+ +|                 |-.|.++|++++++|++|+++.+..+ +......+              
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECCC
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhccccc
Confidence            46677 99995 55                 77999999999999999999988543 11100000              


Q ss_pred             CCCCeeEEEeeCCCccCcchhh------------------------------------hCCCcEEEEcCcCCCc
Q 025619          127 DEETLQVCKGDTRNPKDLDPAI------------------------------------FEGVTHVICCTGTTAF  164 (250)
Q Consensus       127 ~~~~~~~v~~Dl~d~~~~~~~~------------------------------------~~~~D~vi~~Ag~~~~  164 (250)
                      ...++..+..|+...+++.+++                                    +++.|++|++|++..+
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            1234557788888777766543                                    2678999999998753

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.88  E-value=2.9e-05  Score=66.88  Aligned_cols=112  Identities=11%  Similarity=0.146  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~  151 (250)
                      +..+++|.|+|+ |++|..++..|+..|.  +++++++++++++....++.+     ..+.+.. |     + .++ +.+
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~-----~-~~a-~~~   76 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A-----E-YSD-AKD   76 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-----C-GGG-GTT
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C-----c-HHH-hcC
Confidence            345679999996 9999999999999887  899999998876643221111     1222221 1     1 223 678


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      .|+||+.||....+.+   ...+.++.|..-.+.+.+.+. .. ...++.+|-
T Consensus        77 aDiVvi~ag~~~kpG~---tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           77 ADLVVITAGAPQKPGE---TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             CSEEEECCCCC-------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             CCEEEECCCCCCCCCc---hHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            9999999997653322   233455778877788887773 22 235555553

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.88  E-value=2.6e-05  Score=67.51  Aligned_cols=71  Identities=20%  Similarity=0.264  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~v  155 (250)
                      .+++|||+||+|+||..+++.+...|++|+++ +++++.+.+.+ +   +...  .| .+ +++.+.+   .  .++|++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-l---Ga~~--i~-~~-~~~~~~~~~~~~~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-L---GATP--ID-AS-REPEDYAAEHTAGQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-H---TSEE--EE-TT-SCHHHHHHHHHTTSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-c---CCCE--ec-cC-CCHHHHHHHHhcCCCceEE
Confidence            57899999999999999999999999999998 88877765543 2   2333  45 33 3333222   1  379999


Q ss_pred             EEcCc
Q 025619          156 ICCTG  160 (250)
Q Consensus       156 i~~Ag  160 (250)
                      |+++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.87  E-value=4.6e-05  Score=65.60  Aligned_cols=110  Identities=16%  Similarity=0.200  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++++....++.      ..++.+...|      .+ + +.+.
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~------~~-a-~~~a   74 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT------YE-D-CKDA   74 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC------GG-G-GTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc------HH-H-hCCC
Confidence            3568999996 9999999999999987  89999999887665221111      1233332221      22 3 6789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      |+||.+||....+.+   ...+..+.|..-...+.+.+. .. ...++.+|-
T Consensus        75 DvVvi~ag~p~kpG~---~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           75 DIVCICAGANQKPGE---TRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             SEEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CEEEEecccCCCCCc---cHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            999999997543221   122345678777788887763 22 235665554

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.85  E-value=2.8e-05  Score=67.16  Aligned_cols=74  Identities=14%  Similarity=0.098  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---hCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~~~~D~vi~  157 (250)
                      .+++|||+|| |+||..+++.+...|++|++++|++++.+.+.+ +   +.. ...|..+.+ +.+.+   .+++|++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~-~~~d~~~~~-~~~~~~~~~~~~d~vid  236 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-L---GAD-LVVNPLKED-AAKFMKEKVGGVHAAVV  236 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-T---TCS-EEECTTTSC-HHHHHHHHHSSEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-C---CCC-EEecCCCcc-HHHHHHHHhCCCCEEEE
Confidence            4679999999 889999999999999999999999988776543 2   222 235776543 22221   268999999


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      ++|.
T Consensus       237 ~~g~  240 (339)
T 1rjw_A          237 TAVS  240 (339)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.85  E-value=2e-05  Score=70.15  Aligned_cols=73  Identities=29%  Similarity=0.291  Sum_probs=62.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|+|.|+ |-+|+.+++.|.++|+.|++++++++..+.+.+    .++.++.+|.++++.++++-..+.|+||.+.+
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            47999996 999999999999999999999999998887653    35778999999999888654678999998753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.85  E-value=1.4e-05  Score=71.70  Aligned_cols=43  Identities=19%  Similarity=0.324  Sum_probs=38.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .+++|||+||+|+||..+++.+...|++|+++++++++.+.+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~  262 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR  262 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999999999999998877654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.80  E-value=1.2e-05  Score=67.75  Aligned_cols=71  Identities=13%  Similarity=0.142  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+     .+..+     ..+++.+. ..+.|+|||
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-----~~~~~-----~~~~~~~~-~~~aDiVIn  181 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-----NINKI-----NLSHAESH-LDEFDIIIN  181 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-----CCEEE-----CHHHHHHT-GGGCSEEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----hcccc-----cHhhHHHH-hcCCCEEEE
Confidence            356889999996 8999999999999998 89999999988776543     12211     12233332 567899999


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +...
T Consensus       182 aTp~  185 (277)
T 3don_A          182 TTPA  185 (277)
T ss_dssp             CCC-
T ss_pred             CccC
Confidence            8754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.78  E-value=4.7e-05  Score=63.70  Aligned_cols=66  Identities=14%  Similarity=0.199  Sum_probs=50.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|+++|.|+ ||+|++++..|++.|.+|+++.|++++.+++. ++.   +...  ++   +++     .+.|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~---~~~~--~~---~~l-----~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG---CDCF--ME---PPK-----SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT---CEEE--SS---CCS-----SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC---CeEe--cH---HHh-----ccCCEEEEcccC
Confidence            789999996 99999999999999999999999999888776 432   2221  22   222     268999998754


Q ss_pred             C
Q 025619          162 T  162 (250)
Q Consensus       162 ~  162 (250)
                      .
T Consensus       183 G  183 (269)
T 3phh_A          183 S  183 (269)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.76  E-value=2.3e-05  Score=67.84  Aligned_cols=76  Identities=17%  Similarity=0.210  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc--cCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~~~~~D~vi~~  158 (250)
                      .+++|||+||+|+||...++.+...|++|+++++++++.+.+.+ +   +... ..|..+.  +.+.+.-.+++|++|++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~~~~g~Dvv~d~  224 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADI-VLNHKESLLNQFKTQGIELVDYVFCT  224 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSE-EECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-EEECCccHHHHHHHhCCCCccEEEEC
Confidence            57899999999999999999998999999999999988776553 2   1111 1343321  11222112369999999


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      +|.
T Consensus       225 ~g~  227 (346)
T 3fbg_A          225 FNT  227 (346)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            873

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.75  E-value=4.2e-05  Score=64.51  Aligned_cols=69  Identities=23%  Similarity=0.426  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+     ..+  ++   +++.+  . +.|+|||
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~-----~~~--~~---~~l~~--l-~~DivIn  184 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF-----KVI--SY---DELSN--L-KGDVIIN  184 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS-----EEE--EH---HHHTT--C-CCSEEEE
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc-----Ccc--cH---HHHHh--c-cCCEEEE
Confidence            357899999996 8999999999999998 8999999999988876532     222  22   22332  2 6899999


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +...
T Consensus       185 aTp~  188 (282)
T 3fbt_A          185 CTPK  188 (282)
T ss_dssp             CSST
T ss_pred             CCcc
Confidence            8754

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.75  E-value=8e-05  Score=65.13  Aligned_cols=75  Identities=16%  Similarity=0.244  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~~  158 (250)
                      .+++|||+||+|+||..+++.+...|++|++++ ++++.+.+. ++   +.. ...|..+.+..+ .+  .+++|++|++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~l---Ga~-~v~~~~~~~~~~-~~~~~~g~D~vid~  255 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KL---GAD-DVIDYKSGSVEE-QLKSLKPFDFILDN  255 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HT---TCS-EEEETTSSCHHH-HHHTSCCBSEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-Hc---CCC-EEEECCchHHHH-HHhhcCCCCEEEEC
Confidence            578999999999999999998888999999888 455555443 22   222 124665543222 22  2579999999


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      +|..
T Consensus       256 ~g~~  259 (375)
T 2vn8_A          256 VGGS  259 (375)
T ss_dssp             SCTT
T ss_pred             CCCh
Confidence            9854

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.74  E-value=2.1e-05  Score=68.14  Aligned_cols=98  Identities=11%  Similarity=0.207  Sum_probs=67.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~vi  156 (250)
                      +++++|+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +.. ...|..+.+ +.+.+   .  +++|++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~-~~~~~~~~~-~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-I---GAA-HVLNEKAPD-FEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-H---TCS-EEEETTSTT-HHHHHHHHHHHHCCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCC-EEEECCcHH-HHHHHHHHhcCCCCcEEE
Confidence            3689999999999999999888899999999999988776543 2   121 124555433 22222   1  3799999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      +++|..                   .....++.++.+ +++|.+++...
T Consensus       239 d~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~~  267 (349)
T 3pi7_A          239 DAVTGP-------------------LASAIFNAMPKR-ARWIIYGRLDP  267 (349)
T ss_dssp             ESSCHH-------------------HHHHHHHHSCTT-CEEEECCCSCC
T ss_pred             ECCCCh-------------------hHHHHHhhhcCC-CEEEEEeccCC
Confidence            998732                   113345555544 68888876543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.73  E-value=7.6e-05  Score=62.63  Aligned_cols=72  Identities=28%  Similarity=0.340  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +.+++|+|.|+ |++|+++++.|.+.|++|++++|++++.+++.+.+   ++     ++.+  ++.+. ..+.|+||++.
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g~-----~~~~--~~~~~-~~~aDiVi~at  194 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---PL-----EVVN--SPEEV-IDKVQVIVNTT  194 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---CE-----EECS--CGGGT-GGGCSEEEECS
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---CC-----eeeh--hHHhh-hcCCCEEEEeC
Confidence            46789999995 89999999999999999999999998888776543   22     2221  34433 46799999998


Q ss_pred             cCCC
Q 025619          160 GTTA  163 (250)
Q Consensus       160 g~~~  163 (250)
                      ....
T Consensus       195 p~~~  198 (275)
T 2hk9_A          195 SVGL  198 (275)
T ss_dssp             STTS
T ss_pred             CCCC
Confidence            7543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.73  E-value=9e-05  Score=66.82  Aligned_cols=43  Identities=26%  Similarity=0.218  Sum_probs=38.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL  122 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~  122 (250)
                      .+.||+++|||++ +||+.+++.|...|++|+++++++.+..+.
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A  304 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA  304 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            4789999999976 999999999999999999999998765543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.71  E-value=3.5e-05  Score=69.55  Aligned_cols=73  Identities=22%  Similarity=0.359  Sum_probs=62.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |+|+|.|+ |-+|+.+++.|.++|++|+++++++++++.+.+.+   ++..+.+|-++++.++++=.++.|.+|-..
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t   76 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAGAQDADMLVAVT   76 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence            57999995 89999999999999999999999999988776533   578899999999999876567899988643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.70  E-value=4.7e-05  Score=65.66  Aligned_cols=112  Identities=14%  Similarity=0.166  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      ...++|.|+|+ |.+|..++..|+.+|.  +|++++++.++++....++.+     .....+..  .|   .+ . +.+.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---~~-~-~~~a   88 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KD---YS-V-TANS   88 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SS---GG-G-GTTE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CC---HH-H-hCCC
Confidence            35679999997 9999999999999987  899999998776653322211     11112211  12   23 2 5789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      |+||.+||....+.+   ...+.++.|..-.+.+.+.+. .. ...++.+|-
T Consensus        89 DiVvi~aG~~~kpG~---tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           89 KLVIITAGARQQEGE---SRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEEEECCSCCCCTTC---CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CEEEEccCCCCCCCc---cHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999997653322   234456778887777877763 22 245555554

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.69  E-value=0.0002  Score=61.17  Aligned_cols=109  Identities=16%  Similarity=0.129  Sum_probs=66.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC------CCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+..      ....+..     ..+.+ + +.+.|+|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~~-a-~~~aD~V   74 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG-----TNNYA-D-TANSDVI   74 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESCGG-G-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE-----CCCHH-H-HCCCCEE
Confidence            58999998 9999999999999997 899999988766543221111      1111111     12232 3 6789999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      |.++|....+..   ...+....|..-.+.+.+.++ .....+|.+.|
T Consensus        75 i~a~g~p~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKPGM---SREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             EECCCC-----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             EEcCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            999987543221   112233557777777777764 34444554444

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.69  E-value=5.6e-05  Score=67.03  Aligned_cols=72  Identities=25%  Similarity=0.265  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+++|+|.|+ |+||+.+++.|...|+ +|++++|++++.+++.+.+   +...  .   +.+++.+. +.+.|+||.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~~--~---~~~~l~~~-l~~aDvVi~a  234 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA--V---RFDELVDH-LARSDVVVSA  234 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE--C---CGGGHHHH-HHTCSEEEEC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCce--e---cHHhHHHH-hcCCCEEEEc
Confidence            57889999997 9999999999999998 8999999998875554433   1221  1   22345543 5789999999


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      .+.
T Consensus       235 t~~  237 (404)
T 1gpj_A          235 TAA  237 (404)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.69  E-value=4.4e-05  Score=65.45  Aligned_cols=73  Identities=21%  Similarity=0.181  Sum_probs=49.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc--cCcchhhhCCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|||+||+|++|..+++.+...|++|+++++++++.+.+.+ +   +... ..|..+.  +.+++..-+++|++|+++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-l---Ga~~-~i~~~~~~~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L---GAKE-VLAREDVMAERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T---TCSE-EEECC---------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-c---CCcE-EEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence            79999999999999999888899999999999887766543 2   1221 2355443  22232112469999999874

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.68  E-value=0.00024  Score=62.04  Aligned_cols=100  Identities=18%  Similarity=0.141  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~----~~~~D~  154 (250)
                      .+++|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+. +++.+.+    -+++|+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~~~~~~~g~D~  265 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F---GATD-FVNPNDHSEPISQVLSKMTNGGVDF  265 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCCE-EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-h---CCce-EEeccccchhHHHHHHHHhCCCCCE
Confidence            5789999995 9999999998888999 79999999888776542 2   2221 2455431 2333222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +|+++|..                  ......++.++.+.+++|.++...
T Consensus       266 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          266 SLECVGNV------------------GVMRNALESCLKGWGVSVLVGWTD  297 (374)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCcEEEEEcCCC
Confidence            99998742                  112334555555436888877543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.66  E-value=8.1e-05  Score=63.63  Aligned_cols=73  Identities=21%  Similarity=0.169  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++ |||+||+|++|...++.+...|++|+++++++++.+.+.+ + +.. .+  .|..+.+.+++..-+++|++|.++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l-Ga~-~v--i~~~~~~~~~~~~~~~~d~v~d~~g  220 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L-GAN-RI--LSRDEFAESRPLEKQLWAGAIDTVG  220 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H-TCS-EE--EEGGGSSCCCSSCCCCEEEEEESSC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-CCC-EE--EecCCHHHHHhhcCCCccEEEECCC
Confidence            45 9999999999999999888999999999999988776543 2 111 12  2444444344322347999999876

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.66  E-value=8.9e-05  Score=64.43  Aligned_cols=75  Identities=12%  Similarity=0.066  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+|+ |+||...++.+...|++|+++++++++.+.+.+.+....    ..|..+.+.+.+. .+++|++|.++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~-~~g~D~vid~~g  253 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD----YVIGSDQAKMSEL-ADSLDYVIDTVP  253 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC----EEETTCHHHHHHS-TTTEEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce----eeccccHHHHHHh-cCCCCEEEECCC
Confidence            5679999995 999999999888889999999999888776553332211    2355555445443 468999999998


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       254 ~  254 (357)
T 2cf5_A          254 V  254 (357)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.62  E-value=0.00025  Score=61.41  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcc---hhhh----CCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLD---PAIF----EGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~---~~~~----~~~  152 (250)
                      .+++|||+|+ |++|..+++.+...|++|+++++++++.+.+.+ +   +.. ...|..+ .+..+   +..-    +++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~-~~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GAD-VTLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCS-EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-h---CCC-EEEcCcccccHHHHHHHHhccccCCCC
Confidence            5679999997 999999999888899999999999888776543 2   222 2246554 33222   2111    369


Q ss_pred             cEEEEcCcC
Q 025619          153 THVICCTGT  161 (250)
Q Consensus       153 D~vi~~Ag~  161 (250)
                      |++|+++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.62  E-value=3.2e-05  Score=66.71  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=60.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .++++|.|+ |.+|+.++++|.++|+ |+++++++++.+ +.    ..++.++.+|.+|++.++++-.++.|.|+-+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----RSGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----HTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----hCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            458999996 9999999999999999 999999998887 54    246889999999999888654678899987653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.61  E-value=0.00013  Score=63.14  Aligned_cols=70  Identities=20%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+|+ |+||...++.+...|++|+++++++++.+.+.+ +   +...+.   ++.+.+.+    ++|++|.++|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v~---~~~~~~~~----~~D~vid~~g  243 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-M---GVKHFY---TDPKQCKE----ELDFIISTIP  243 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-T---TCSEEE---SSGGGCCS----CEEEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-c---CCCeec---CCHHHHhc----CCCEEEECCC
Confidence            5789999997 999999999888899999999999888776543 2   222222   45554442    8999999987


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus       244 ~~  245 (348)
T 3two_A          244 TH  245 (348)
T ss_dssp             SC
T ss_pred             cH
Confidence            53

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.61  E-value=4.4e-05  Score=65.51  Aligned_cols=73  Identities=23%  Similarity=0.214  Sum_probs=50.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc--cCcchhhhCCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|||+||+|++|..+++.+...|++|+++++++++.+.+.+ +. .. .+  .|..+.  +.+++..-+++|++|+++|.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lG-a~-~v--~~~~~~~~~~~~~~~~~~~d~vid~~g~  227 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LG-AS-EV--ISREDVYDGTLKALSKQQWQGAVDPVGG  227 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HT-CS-EE--EEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-Cc-EE--EECCCchHHHHHHhhcCCccEEEECCcH
Confidence            79999999999999999888889999999998877665543 21 11 12  233332  22332212368999999873

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.60  E-value=7.8e-05  Score=61.90  Aligned_cols=69  Identities=22%  Similarity=0.287  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.+ +++|.|+ |++|++++..|++.|+ +|++++|++++.+++.+.+     ...  +   .+++.+. ..+.|+|||+
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-----~~~--~---~~~~~~~-~~~aDiVIna  173 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-----KIF--S---LDQLDEV-VKKAKSLFNT  173 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-----EEE--E---GGGHHHH-HHTCSEEEEC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----ccC--C---HHHHHhh-hcCCCEEEEC
Confidence            456 8999996 9999999999999998 8999999999988765432     111  2   2334433 5789999998


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ...
T Consensus       174 tp~  176 (253)
T 3u62_A          174 TSV  176 (253)
T ss_dssp             SST
T ss_pred             CCC
Confidence            753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.59  E-value=7.7e-05  Score=67.07  Aligned_cols=43  Identities=26%  Similarity=0.361  Sum_probs=38.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .+++|+|+||+|+||...++.+...|++|+++++++++++.+.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~  270 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR  270 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            5789999999999999999998889999999999988877654

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.59  E-value=0.00028  Score=60.38  Aligned_cols=112  Identities=13%  Similarity=0.071  Sum_probs=70.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC--hhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~--~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      ++.++|.|+|+ |.+|..++..|+..|. +|++++++  +++.+....++.      .....+...  +|   .+ + ++
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d---~~-a-~~   77 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD---YA-D-TA   77 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC---GG-G-GT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC---HH-H-hC
Confidence            45679999996 9999999999999999 99999998  444433221110      011112111  11   22 3 68


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ++|+||.+||....+.+   ...+.++.|..-.+.+.+.+. .. ...++.+|.
T Consensus        78 ~aDvVIiaag~p~kpg~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           78 DSDVVVITAGIARKPGM---SRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             TCSEEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            89999999997653321   223345668777777877763 22 345666664

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.59  E-value=3.5e-05  Score=66.33  Aligned_cols=112  Identities=10%  Similarity=0.090  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      |++++|.|+|| |.+|..++..|+..|. +|+++++++++++....++.      .....+...  +|   .+ + +.+.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d---~~-a-~~~a   76 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--ND---YA-A-IEGA   76 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SS---GG-G-GTTC
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CC---HH-H-HCCC
Confidence            45578999998 9999999999999998 99999999877643221111      012222111  12   22 3 6889


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      |+||..||....+.+   ...+.+..|..-.+.+.+.+. .. ...++.+|-
T Consensus        77 DiVIiaag~p~k~G~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           77 DVVIVTAGVPRKPGM---SRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             SEEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEccCcCCCCCC---CHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            999999987543322   223345667777777777663 22 245555554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.58  E-value=0.00041  Score=60.52  Aligned_cols=99  Identities=15%  Similarity=0.105  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~----~~~~D~  154 (250)
                      .+++|||+|+ |+||..+++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+ .+++.+.+    -+++|+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~~~~~~~g~D~  264 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V---GATE-CVNPQDYKKPIQEVLTEMSNGGVDF  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h---CCce-EecccccchhHHHHHHHHhCCCCcE
Confidence            5789999995 9999999998888999 79999999888776542 2   2221 235443 12333222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      +|.++|..                  ......++.++.+.+++|.++..
T Consensus       265 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          265 SFEVIGRL------------------DTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             EEECSCCH------------------HHHHHHHHHBCTTTCEEEECSCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCcEEEEeccC
Confidence            99998742                  11233455555543688887654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.58  E-value=0.00026  Score=60.76  Aligned_cols=111  Identities=11%  Similarity=0.140  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC------CCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~------~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++++|.|+| +|.+|..++..|+..|. +|+++++++++++....++.+      ....+...  .|   .+ + +.+.|
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d---~~-a-~~~aD   75 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND---YK-D-LENSD   75 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---GG-G-GTTCS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC---HH-H-HCCCC
Confidence            456899999 59999999999999988 999999998776532221111      12222211  12   22 3 67899


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      +||..||....+.+   ...+.+..|..-...+.+.+. .. ...++.+|-
T Consensus        76 vVIi~ag~p~k~G~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           76 VVIVTAGVPRKPGM---SRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             EEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEEcCCcCCCCCC---CHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999987543321   112234567777777777663 22 235555543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.57  E-value=7.9e-05  Score=64.79  Aligned_cols=75  Identities=16%  Similarity=0.223  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+|| |+||..+++.+...|++|+++++++++.+.+.+ +   +... ..|..+..++.+.+.+++|+||.++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-v~~~~~~~~~~~~~~~~~D~vid~~g  252 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADH-YIATLEEGDWGEKYFDTFDLIVVCAS  252 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSE-EEEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCE-EEcCcCchHHHHHhhcCCCEEEECCC
Confidence            4689999999 999999999888889999999999887766543 2   1211 24554441222222368999999998


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       253 ~  253 (360)
T 1piw_A          253 S  253 (360)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.56  E-value=0.0001  Score=63.74  Aligned_cols=98  Identities=15%  Similarity=0.138  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~  154 (250)
                      .+++|||+|| |+||..+++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+.+ +.+.+   .  .++|+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~---Ga~~-~~~~~~~~-~~~~v~~~~~g~g~D~  239 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-V---GADY-VINPFEED-VVKEVMDITDGNGVDV  239 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-H---TCSE-EECTTTSC-HHHHHHHHTTTSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---CCCE-EECCCCcC-HHHHHHHHcCCCCCCE
Confidence            6789999999 9999999999888999 99999999888766542 2   1221 24555432 22222   1  26999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +|+++|..                  ......++.++.+ +++|.+++..
T Consensus       240 vid~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~~~  270 (348)
T 2d8a_A          240 FLEFSGAP------------------KALEQGLQAVTPA-GRVSLLGLYP  270 (348)
T ss_dssp             EEECSCCH------------------HHHHHHHHHEEEE-EEEEECCCCS
T ss_pred             EEECCCCH------------------HHHHHHHHHHhcC-CEEEEEccCC
Confidence            99998741                  1123445555543 5788887643

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.56  E-value=0.0004  Score=60.65  Aligned_cols=98  Identities=17%  Similarity=0.125  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~----~~~~D~  154 (250)
                      .+++|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+. +++.+.+    -+++|+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~~-vi~~~~~~~~~~~~v~~~~~~g~Dv  268 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L---GATD-CLNPRELDKPVQDVITELTAGGVDY  268 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCSE-EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-h---CCcE-EEccccccchHHHHHHHHhCCCccE
Confidence            5789999995 9999999998888899 79999999988776542 2   2221 2354431 2333222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS  202 (250)
                      ||.++|..                  ......++.++.+.+++|.++.
T Consensus       269 vid~~G~~------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          269 SLDCAGTA------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             EEESSCCH------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            99998741                  1122344555544368887765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.55  E-value=0.00019  Score=62.41  Aligned_cols=78  Identities=15%  Similarity=0.145  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~  154 (250)
                      .+++|||+|| |++|...++.+...|++ |+++++++++.+.+.+.  ...+..+..|-.+.+++.+.+   .  +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv  255 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI--CPEVVTHKVERLSAEESAKKIVESFGGIEPAV  255 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH--CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--chhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence            5678999998 99999999988889997 99999999887765543  223333333433333333222   2  37999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       256 vid~~g~  262 (363)
T 3m6i_A          256 ALECTGV  262 (363)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999874

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=0.00014  Score=63.15  Aligned_cols=75  Identities=21%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc--cCcchhhhC-CCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFE-GVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~~~~~~~~-~~D~vi  156 (250)
                      .+++|||+|| |++|...++.+... |++|+++++++++.+.+.+ +   +... ..|..+.  +.+.+..-+ ++|++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~v~~~~~g~g~Dvvi  259 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L---GADH-VVDARRDPVKQVMELTRGRGVNVAM  259 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T---TCSE-EEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-h---CCCE-EEeccchHHHHHHHHhCCCCCcEEE
Confidence            5679999999 99999999888888 9999999999988776543 2   2221 2465554  223222113 699999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .++|.
T Consensus       260 d~~G~  264 (359)
T 1h2b_A          260 DFVGS  264 (359)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99874

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.54  E-value=0.00021  Score=57.58  Aligned_cols=67  Identities=19%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++++|.|.| +|.+|..+++.|.+.|++|++++|++++.+.+.+.    ++...        +..++ +.++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----g~~~~--------~~~~~-~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS----AAQVT--------FQEEA-VSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT----TSEEE--------EHHHH-TTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcee--------cHHHH-HhCCCEEEECCC
Confidence            345799999 89999999999999999999999999887765432    33321        23333 567899998775


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus        93 ~   93 (215)
T 2vns_A           93 R   93 (215)
T ss_dssp             G
T ss_pred             h
Confidence            3

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.53  E-value=0.00038  Score=60.84  Aligned_cols=99  Identities=18%  Similarity=0.147  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~----~~~~D~  154 (250)
                      .+.+|||+|+ |+||...++.+...|+ +|+++++++++++.+.+ +   ++.. ..|..+ .+++.+.+    -+++|+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~~-vi~~~~~~~~~~~~i~~~~~gg~D~  266 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-F---GVNE-FVNPKDHDKPIQEVIVDLTDGGVDY  266 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-T---TCCE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c---CCcE-EEccccCchhHHHHHHHhcCCCCCE
Confidence            5678999998 9999999988888899 79999999988876543 2   2221 244442 22333222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      +|.++|..                  ......++.++.+.++++.++..
T Consensus       267 vid~~g~~------------------~~~~~~~~~l~~g~G~iv~~G~~  297 (378)
T 3uko_A          267 SFECIGNV------------------SVMRAALECCHKGWGTSVIVGVA  297 (378)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEECCCCH------------------HHHHHHHHHhhccCCEEEEEccc
Confidence            99998742                  11233455556555788888754

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.50  E-value=0.00011  Score=63.20  Aligned_cols=111  Identities=14%  Similarity=0.112  Sum_probs=72.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++++....++.     .....+...  +|   .+.  +++.|
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d---~~~--~~daD   91 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KD---YSV--SAGSK   91 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SS---SCS--CSSCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CC---HHH--hCCCC
Confidence            4568999998 9999999999999997  89999999876654321111     111122221  12   332  57889


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      +||-.||....+.+   ...+....|..-.+.+.+.+. .. ...++.+|-
T Consensus        92 iVIitaG~p~kpG~---tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           92 LVVITAGARQQEGE---SRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EEEECCSCCCCSSC---CTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEeCCCCCCCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            99999998654332   233455778887777777663 22 345666664

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.50  E-value=0.00036  Score=60.85  Aligned_cols=99  Identities=17%  Similarity=0.128  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~----~~~~D~  154 (250)
                      .+++|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+. +++.+.+    -+++|+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~v~~~~~~g~D~  263 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-F---GATE-CINPQDFSKPIQEVLIEMTDGGVDY  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-H---TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-c---CCce-EeccccccccHHHHHHHHhCCCCCE
Confidence            5789999995 9999999988888899 79999999888766542 2   1211 2354431 2333222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      +|.++|..                  ......++.++.+.+++|.++..
T Consensus       264 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  294 (373)
T 2fzw_A          264 SFECIGNV------------------KVMRAALEACHKGWGVSVVVGVA  294 (373)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             EEECCCcH------------------HHHHHHHHhhccCCcEEEEEecC
Confidence            99998741                  11233455555543688887754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.48  E-value=0.00017  Score=63.06  Aligned_cols=74  Identities=14%  Similarity=0.166  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+.+|||+|+ |+||...++.+...|++|+++++++++.+.+.+ +   +.. ...|..+.+.+++. .+++|++|.++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l---Ga~-~vi~~~~~~~~~~~-~~g~Dvvid~~g  266 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L---GAD-EVVNSRNADEMAAH-LKSFDFILNTVA  266 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCS-EEEETTCHHHHHTT-TTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCc-EEeccccHHHHHHh-hcCCCEEEECCC
Confidence            4679999997 899999999888899999999999888776543 2   121 12466555434432 368999999988


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       267 ~  267 (369)
T 1uuf_A          267 A  267 (369)
T ss_dssp             S
T ss_pred             C
Confidence            5

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.47  E-value=8.4e-05  Score=64.40  Aligned_cols=114  Identities=21%  Similarity=0.241  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecChh--hHhhhhCcC---CCCCe-eEEEeeCCCccCcch
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQ---DEETL-QVCKGDTRNPKDLDP  146 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~~--~~~~~~~~~---~~~~~-~~v~~Dl~d~~~~~~  146 (250)
                      +..-+|.|+||+|+||..++..|+....       ++.+++.++.  +++...-++   ..+.. ..+..   +  +..+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~---~--~~~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT---A--DPRV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE---S--CHHH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc---C--ChHH
Confidence            4456899999999999999998887642       6888888653  223221111   11111 12222   1  2233


Q ss_pred             hhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC-C-C-CeEEEEcc
Q 025619          147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-L-KRIVLVSS  202 (250)
Q Consensus       147 ~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~-~-~~iV~iSS  202 (250)
                      + +++.|+||-.||....|.+   ...+.++.|..-.+.+.+++.+ . . .+++.+|-
T Consensus        97 a-~~~advVvi~aG~prkpGm---tR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           97 A-FDGVAIAIMCGAFPRKAGM---ERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             H-TTTCSEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             H-hCCCCEEEECCCCCCCCCC---CHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            3 7899999999998664432   2344567888888888887632 2 2 34555554

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.47  E-value=0.00025  Score=59.96  Aligned_cols=40  Identities=18%  Similarity=0.214  Sum_probs=36.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      ++|.|.|+ |.+|..++..|++.|++|++++|++++.+.+.
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~   43 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR   43 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            58999995 99999999999999999999999998877664

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.47  E-value=5.7e-05  Score=64.08  Aligned_cols=109  Identities=12%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+|.|+|| |.+|..++..|+..|.  +|+++++++++++....++.      .....+...  +|    .++ +++.|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a-~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSL-LKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHH-hCCCCE
Confidence            47999999 9999999999999998  89999999987652111100      112222211  12    333 678999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ||..||....+.+   ...+..+.|..-.+.+.+.+. .. ...++.+|.
T Consensus        73 VViaag~~~kpG~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           73 IVVTAGLARKPGM---TRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEECCCCCCCSSC---CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEECCCCCCCCCC---cHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            9999997543321   122344667777777777763 22 345666554

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.46  E-value=0.00025  Score=61.66  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~v  155 (250)
                      .+++|||+| +|+||...++.+...|++|+++++++++.+.+.+ +   +... ..| .+.+++.+.+   .  .++|++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~-~~~~~~~~~v~~~~~g~g~D~v  261 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-L---GADH-GIN-RLEEDWVERVYALTGDRGADHI  261 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-H---TCSE-EEE-TTTSCHHHHHHHHHTTCCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-c---CCCE-EEc-CCcccHHHHHHHHhCCCCceEE
Confidence            578999999 8999999999888899999999999888776543 2   1221 235 4434433322   2  279999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      |.++|...                   ....++.++.+ +++|.++....
T Consensus       262 id~~g~~~-------------------~~~~~~~l~~~-G~iv~~G~~~~  291 (363)
T 3uog_A          262 LEIAGGAG-------------------LGQSLKAVAPD-GRISVIGVLEG  291 (363)
T ss_dssp             EEETTSSC-------------------HHHHHHHEEEE-EEEEEECCCSS
T ss_pred             EECCChHH-------------------HHHHHHHhhcC-CEEEEEecCCC
Confidence            99998210                   12345555544 68888876544

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.45  E-value=0.00057  Score=59.58  Aligned_cols=99  Identities=16%  Similarity=0.128  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~----~~~~D~  154 (250)
                      .+++|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   ++.. ..|..+. +++.+.+    -+++|+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~~-vi~~~~~~~~~~~~i~~~t~gg~Dv  264 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GATE-CLNPKDYDKPIYEVICEKTNGGVDY  264 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-c---CCcE-EEecccccchHHHHHHHHhCCCCCE
Confidence            5679999995 9999999988877898 79999999888776542 2   2221 2344431 2232222    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      ||.++|..                  ......++.++.+.+++|.++..
T Consensus       265 vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (373)
T 1p0f_A          265 AVECAGRI------------------ETMMNALQSTYCGSGVTVVLGLA  295 (373)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECCCC
T ss_pred             EEECCCCH------------------HHHHHHHHHHhcCCCEEEEEccC
Confidence            99998742                  11223445555443678877653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.45  E-value=0.00037  Score=59.10  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+++++|.|+ |.||+++++.|...|++|++.+|++++.+.+.+    .+++.+  +   .+++++. +.+.|+|+++
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~~~--~---~~~l~~~-l~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGLVPF--H---TDELKEH-VKDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCEEE--E---GGGHHHH-STTCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCCeEE--c---hhhHHHH-hhCCCEEEEC
Confidence            578899999995 999999999999999999999999877654432    123322  1   2345543 6789999998


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      ...
T Consensus       223 ~p~  225 (300)
T 2rir_A          223 IPS  225 (300)
T ss_dssp             CSS
T ss_pred             CCh
Confidence            753

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.41  E-value=0.00033  Score=60.87  Aligned_cols=98  Identities=17%  Similarity=0.088  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-----C-eEEEEecChh--h-HhhhhCcCCC-CCeeEEEeeCCCccCcchhhhC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-----I-KSRLLLRDPE--K-ATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-----~-~V~~~~R~~~--~-~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      ++++|.|.||||.+|+.+++.|.+++     . +++.+.++.+  + .......+.. ..+.+  .|+ |    .+. +.
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~----~~~-~~   79 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-E----AAV-LG   79 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-C----HHH-HT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-C----HHH-hc
Confidence            34689999999999999999999887     4 6777654321  1 2211111100 11111  122 1    122 46


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                      ++|+||.++|...                   +..+++.++.| .++|-+|+..-.
T Consensus        80 ~~DvVf~alg~~~-------------------s~~~~~~~~~G-~~vIDlSa~~R~  115 (352)
T 2nqt_A           80 GHDAVFLALPHGH-------------------SAVLAQQLSPE-TLIIDCGADFRL  115 (352)
T ss_dssp             TCSEEEECCTTSC-------------------CHHHHHHSCTT-SEEEECSSTTTC
T ss_pred             CCCEEEECCCCcc-------------------hHHHHHHHhCC-CEEEEECCCccC
Confidence            8999999987532                   23455655334 578888887643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.41  E-value=0.00059  Score=57.25  Aligned_cols=66  Identities=18%  Similarity=0.200  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +++|.|.|++|.+|..+++.|++.|++|++++|++++.+.+.+.    ++     +.+   +..+. ..++|+||.+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----g~-----~~~---~~~~~-~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM----GI-----PLT---DGDGW-IDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT----TC-----CCC---CSSGG-GGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc----CC-----CcC---CHHHH-hcCCCEEEEcCC
Confidence            46899999999999999999999999999999999887765431    22     122   23332 467888887763

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.40  E-value=0.00011  Score=60.87  Aligned_cols=77  Identities=21%  Similarity=0.252  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh-------------------hhHhhhhCcCC--CCC--eeEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD--EET--LQVCK  135 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~-------------------~~~~~~~~~~~--~~~--~~~v~  135 (250)
                      +++++|+|.| .||+|.++++.|++.|. ++++++++.                   .+.+.+++.+.  .+.  ++.+.
T Consensus        29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            4567999999 58999999999999997 899999986                   45544433221  233  34444


Q ss_pred             eeCCCccCcchhhhCCCcEEEEcC
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++++ +.+.+ ++++.|+||.+.
T Consensus       108 ~~~~~-~~~~~-~~~~~DvVi~~~  129 (249)
T 1jw9_B          108 ALLDD-AELAA-LIAEHDLVLDCT  129 (249)
T ss_dssp             SCCCH-HHHHH-HHHTSSEEEECC
T ss_pred             ccCCH-hHHHH-HHhCCCEEEEeC
Confidence            45543 33443 367899999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.39  E-value=0.0003  Score=60.65  Aligned_cols=73  Identities=18%  Similarity=0.176  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~v  155 (250)
                      .+++|||+|| |++|..+++.+...|+ +|+++++++++.+.+.+ +    .. ...|..+. ++.+.+    -+++|++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~-~v~~~~~~-~~~~~~~~~~~~g~D~v  235 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----AD-RLVNPLEE-DLLEVVRRVTGSGVEVL  235 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CS-EEECTTTS-CHHHHHHHHHSSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HH-hccCcCcc-CHHHHHHHhcCCCCCEE
Confidence            5779999999 9999999998888999 99999999888765543 1    11 12455543 232222    1379999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |+++|.
T Consensus       236 id~~g~  241 (343)
T 2dq4_A          236 LEFSGN  241 (343)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.39  E-value=0.00018  Score=61.54  Aligned_cols=74  Identities=19%  Similarity=0.155  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|+|+||+|++|...++.+...|++|++++++ ++.+.+. ++   +... ..|..+.+.+.+. .+++|++|.++|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~~~~~-~l---Ga~~-~i~~~~~~~~~~~-~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNHAFLK-AL---GAEQ-CINYHEEDFLLAI-STPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHHHHHH-HH---TCSE-EEETTTSCHHHHC-CSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chHHHHH-Hc---CCCE-EEeCCCcchhhhh-ccCCCEEEECCC
Confidence            57899999999999999999988999999988854 3443332 22   1221 3466554424433 478999999987


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       225 ~  225 (321)
T 3tqh_A          225 G  225 (321)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.39  E-value=0.00035  Score=60.57  Aligned_cols=73  Identities=16%  Similarity=0.181  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCChHHHHH-HHHH-HHCCCe-EEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccC--cchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLV-VASL-LSRNIK-SRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKD--LDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~l-a~~L-~~~G~~-V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~--~~~~~~~~~  152 (250)
                      .+++|||+|| |+||... ++.+ ...|++ |++++++++   +.+.+.+ +   ++..+  |..+.+.  +.+. .+++
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-l---Ga~~v--~~~~~~~~~i~~~-~gg~  243 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-L---DATYV--DSRQTPVEDVPDV-YEQM  243 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-T---TCEEE--ETTTSCGGGHHHH-SCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-c---CCccc--CCCccCHHHHHHh-CCCC
Confidence            3479999999 9999999 8776 667997 999999887   7665542 2   34444  6654321  2222 2479


Q ss_pred             cEEEEcCcC
Q 025619          153 THVICCTGT  161 (250)
Q Consensus       153 D~vi~~Ag~  161 (250)
                      |++|.++|.
T Consensus       244 Dvvid~~g~  252 (357)
T 2b5w_A          244 DFIYEATGF  252 (357)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.39  E-value=0.00023  Score=60.56  Aligned_cols=97  Identities=21%  Similarity=0.179  Sum_probs=59.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|.|| |.+|..++..|+..|+  +|+++++++++++.....+..     ....+. .  .|   .+ + +++.|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~---~~-a-~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GG---HS-E-LADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--EC---GG-G-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CC---HH-H-hCCCCEE
Confidence            37999998 9999999999999998  999999998766543221111     122221 1  12   22 3 6789999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~  191 (250)
                      |.+++....+..   ...+....|..-...+++.+.
T Consensus        72 Ii~~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~  104 (304)
T 2v6b_A           72 ILTAGANQKPGE---SRLDLLEKNADIFRELVPQIT  104 (304)
T ss_dssp             EECC---------------CHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCCCCCCC---cHHHHHHhHHHHHHHHHHHHH
Confidence            999986543221   122344667777777777663

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.38  E-value=0.00032  Score=59.99  Aligned_cols=112  Identities=21%  Similarity=0.264  Sum_probs=68.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-C--CeEEEEecChhhHhhhhCcCCC--CCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-N--IKSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G--~~V~~~~R~~~~~~~~~~~~~~--~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++|.|+||+|.||..++..|..+ +  .+++++++++ +.+....++.+  ....+... .+  ....++ +.+.|+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~-~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPA-LEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHH-HTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHH-hCCCCEEEE
Confidence            47999999999999999999875 5  4799999886 22221111111  11222111 11  122223 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      .||....+.+   ...+.++.|..-.+.+.+++. .. ...++.+|-
T Consensus        76 ~ag~~rkpG~---~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           76 SAGVARKPGM---DRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             CCSCSCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             eCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            9997643322   223355778888888887763 22 345666654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.37  E-value=0.00051  Score=58.06  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=53.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|+|.| .|.||+.+++.|...|++|++.+|++++.+.+.+    .++..+  +   .+++++. +.+.|+|+++
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~~~--~---~~~l~~~-l~~aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE----MGMEPF--H---ISKAAQE-LRDVDVCINT  220 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTSEEE--E---GGGHHHH-TTTCSEEEEC
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----CCCeec--C---hhhHHHH-hcCCCEEEEC
Confidence            56889999999 5999999999999999999999999877554432    123322  2   2345543 6789999998


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      ..
T Consensus       221 ~p  222 (293)
T 3d4o_A          221 IP  222 (293)
T ss_dssp             CS
T ss_pred             CC
Confidence            73

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.37  E-value=0.00041  Score=59.67  Aligned_cols=74  Identities=16%  Similarity=0.175  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~~~~D~vi~~  158 (250)
                      .+++|||+|+ |+||...++.+...|++|+++++++++.+.+.+ +   +... ..|..+.+..+..  ..+++|++|.+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-~i~~~~~~~~~~~~~~~g~~d~vid~  239 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-L---GAEV-AVNARDTDPAAWLQKEIGGAHGVLVT  239 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCSE-EEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-c---CCCE-EEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence            5789999997 899999999888899999999999988776543 2   2221 2465553322211  13589999999


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      +|
T Consensus       240 ~g  241 (340)
T 3s2e_A          240 AV  241 (340)
T ss_dssp             SC
T ss_pred             CC
Confidence            86

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.37  E-value=0.00084  Score=57.38  Aligned_cols=109  Identities=16%  Similarity=0.109  Sum_probs=68.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++++++....++.      .....+...|  +    .++ +.+.|+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a-~~~aDv   72 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGP-TEDSDV   72 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHH-hCCCCE
Confidence            47999996 9999999999999886  89999999877653221111      1122222111  1    223 678999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS  202 (250)
                      ||.+||....+.+   ...+.++.|..-.+.+.+.+. .. ...++.+|-
T Consensus        73 Vii~ag~~~kpG~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           73 CIITAGLPRSPGM---SRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEECCCCCCCCCC---CHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            9999997643322   223345678887888888773 22 245666554

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.33  E-value=0.00035  Score=61.02  Aligned_cols=99  Identities=16%  Similarity=0.112  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhhhCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~~~~D~vi  156 (250)
                      ..+++|||+||+|++|...++.+...|++|+++. ++++.+.+. ++   +.. ...|..+.+.   +.+..-+++|++|
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~l---Ga~-~vi~~~~~~~~~~v~~~t~g~~d~v~  236 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SR---GAE-EVFDYRAPNLAQTIRTYTKNNLRYAL  236 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HT---TCS-EEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-Hc---CCc-EEEECCCchHHHHHHHHccCCccEEE
Confidence            3678999999999999999998888999998886 666666443 22   222 1245555432   2221124699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEcc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS  202 (250)
                      .++|..                  ......++.+.+..+++|.++.
T Consensus       237 d~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~  264 (371)
T 3gqv_A          237 DCITNV------------------ESTTFCFAAIGRAGGHYVSLNP  264 (371)
T ss_dssp             ESSCSH------------------HHHHHHHHHSCTTCEEEEESSC
T ss_pred             ECCCch------------------HHHHHHHHHhhcCCCEEEEEec
Confidence            998742                  1122344555333468887774

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.32  E-value=0.00022  Score=61.15  Aligned_cols=103  Identities=14%  Similarity=0.052  Sum_probs=58.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++|.|+|| |.+|..++..|+..|.  +|+++++++++++....++...........++. .+ .++ +.+.|+||..+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~-~~a-~~~aDvVii~~   82 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD-YSD-VKDCDVIVVTA   82 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C-GGG-GTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC-HHH-hCCCCEEEEcC
Confidence            357999998 9999999999999987  899999998765542222111100000111221 12 223 68899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~  191 (250)
                      |....+..   ...+....|..-...+++.+.
T Consensus        83 g~p~k~g~---~r~dl~~~n~~i~~~i~~~i~  111 (318)
T 1y6j_A           83 GANRKPGE---TRLDLAKKNVMIAKEVTQNIM  111 (318)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCc---CHHHHHHhhHHHHHHHHHHHH
Confidence            87542211   111233567776777777663

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.31  E-value=0.0006  Score=59.48  Aligned_cols=46  Identities=15%  Similarity=0.117  Sum_probs=40.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK  125 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~  125 (250)
                      ++.+|+|+|.|+ |.+|+.+++.|.+.|++|++.++++++++++.++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            478999999995 9999999999999999999999999887766543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.31  E-value=0.00034  Score=59.85  Aligned_cols=84  Identities=14%  Similarity=-0.060  Sum_probs=58.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.+++++|.|++.-+|+.+++.|++.|++|++++|+..+..+..+.+............++++++.+. ..+.|+||.+
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~-l~~ADIVIsA  252 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKC-SLDSDVVITG  252 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHH-HHHCSEEEEC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHH-hccCCEEEEC
Confidence            578999999999888999999999999999999999865544333322211111111111333556654 6789999999


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      .|...
T Consensus       253 tg~p~  257 (320)
T 1edz_A          253 VPSEN  257 (320)
T ss_dssp             CCCTT
T ss_pred             CCCCc
Confidence            88653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.30  E-value=0.00028  Score=60.51  Aligned_cols=108  Identities=10%  Similarity=0.119  Sum_probs=67.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|+|| |.+|..++..|+..+.  +|+++++++++++....++.     ...+.+. .|     . .++ +.+.|+|
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~-----~-~~a-~~~aDvV   76 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG-----E-YSD-CKDADLV   76 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC-----C-GGG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC-----C-HHH-hCCCCEE
Confidence            58999998 9999999999998886  89999999887764322111     1222222 21     1 223 6889999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C-CCCeEEEEcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSS  202 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~-~~~~iV~iSS  202 (250)
                      |..+|....+..   ...+....|..-...+.+.++ . ....++++|-
T Consensus        77 ii~ag~~~~~g~---~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           77 VITAGAPQKPGE---SRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             EECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EECCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            999987653322   122345678877777877663 2 2345555543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.29  E-value=0.00046  Score=60.80  Aligned_cols=75  Identities=23%  Similarity=0.226  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h-C-CCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-E-GVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~-~-~~D~  154 (250)
                      .+++|||.|+ |+||...++.+...|+ +|+++++++++++.+.+ +   +++  ..|..+.+.+.+.+   . + ++|+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~--~i~~~~~~~~~~~~~~~~~g~g~Dv  257 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-A---GFE--TIDLRNSAPLRDQIDQILGKPEVDC  257 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-T---TCE--EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c---CCc--EEcCCCcchHHHHHHHHhCCCCCCE
Confidence            5789999996 9999999988777899 89999999988776553 2   333  35665543312111   2 2 6999


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      +|.++|..
T Consensus       258 vid~~g~~  265 (398)
T 2dph_A          258 GVDAVGFE  265 (398)
T ss_dssp             EEECSCTT
T ss_pred             EEECCCCc
Confidence            99999853

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.28  E-value=0.0002  Score=62.38  Aligned_cols=74  Identities=20%  Similarity=0.280  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~v  155 (250)
                      .+++|||+||+|++|...++.+.. .|++|+++++++++.+.+.+ +   +... ..|..+  ++.+.+    -+++|+|
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-l---Gad~-vi~~~~--~~~~~v~~~~~~g~Dvv  243 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-L---GAHH-VIDHSK--PLAAEVAALGLGAPAFV  243 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-T---TCSE-EECTTS--CHHHHHHTTCSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-c---CCCE-EEeCCC--CHHHHHHHhcCCCceEE
Confidence            577999999999999988876655 58999999999988776543 2   2221 234433  222222    2379999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |.++|.
T Consensus       244 id~~g~  249 (363)
T 4dvj_A          244 FSTTHT  249 (363)
T ss_dssp             EECSCH
T ss_pred             EECCCc
Confidence            999873

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=97.28  E-value=0.00053  Score=56.93  Aligned_cols=69  Identities=22%  Similarity=0.302  Sum_probs=52.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.+ +++|.|+ |++|+++++.|.+.|++|++++|++++.+++.+...   ..     .   +++++ . .+.|+||++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~~-----~---~~~~~-~-~~~Divi~~  178 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---LR-----A---VPLEK-A-REARLLVNA  178 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---CE-----E---CCGGG-G-GGCSEEEEC
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---cc-----h---hhHhh-c-cCCCEEEEc
Confidence            3567 8999995 889999999999999999999999988776654332   11     1   23333 3 578999999


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      ....
T Consensus       179 tp~~  182 (263)
T 2d5c_A          179 TRVG  182 (263)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            8754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.28  E-value=0.00014  Score=62.68  Aligned_cols=102  Identities=17%  Similarity=0.133  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      .++|.|.|| |.+|..++..|+..|+ +|+++++++++++.....+.      .....+..     ..+++++ +.+.|+
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea-~~~aDi   81 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAA-LTGADC   81 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHH-HTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHH-hCCCCE
Confidence            458999998 9999999999999998 99999999877665211110      00111111     1234433 688999


Q ss_pred             EEEcCcCCCcCCCCCC--CCCCcceehHHHHHHHHHHc
Q 025619          155 VICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~--~~~~~~~~N~~g~~~l~~a~  190 (250)
                      ||..+|....+.....  ...+....|..-.+.+.+.+
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i  119 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNI  119 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999986542211000  11222345666666666665

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.28  E-value=0.00017  Score=61.83  Aligned_cols=109  Identities=17%  Similarity=0.221  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      +.++|.|+|| |.+|..++..|+.+|.  +|+++++++++++.....+.      ...+.+. .|     . .++ +.+.
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~-----~-~~a-~~~a   75 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG-----E-YSD-CHDA   75 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC-----C-GGG-GTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC-----C-HHH-hCCC
Confidence            4468999998 9999999999998884  89999999876654211110      1222222 21     1 333 6889


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVS  201 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iS  201 (250)
                      |+||..+|....+..   ...+....|..-...+.+.+. .. ...++++|
T Consensus        76 DvVvi~ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPGE---TRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCCC---cHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999999987542211   111223556666666666553 22 23455544

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.28  E-value=0.00048  Score=58.30  Aligned_cols=109  Identities=12%  Similarity=0.131  Sum_probs=70.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+|.|+|| |+||..++..|+.++.  ++++++.++++.+..+.++.      .....+...  .|   .+ . +++.|+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d---~~-~-~~~aDv   72 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD---YS-L-LKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SC---GG-G-GTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CC---HH-H-hCCCCE
Confidence            47889995 9999999999998874  79999998866543322111      111222221  12   22 2 578899


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      ||-.||....|.+   ...+.++.|..-.+.+.+++. ... ..++.+|-
T Consensus        73 VvitAG~prkpGm---tR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           73 IVVTAGLARKPGM---TRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEECCCCCCCSSS---CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEecCCCCCCCC---chHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            9999998764433   234456788888888888773 333 34554443

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.26  E-value=0.00014  Score=62.70  Aligned_cols=98  Identities=20%  Similarity=0.211  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC-ccCcchhhhC-CCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFE-GVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~~~~~~~~-~~D~vi  156 (250)
                      .+++|||+|| |+||...++.+...  |++|+++++++++.+.+.+ +   +... ..|..+ .+.+++..-+ ++|++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~~g~g~D~vi  243 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-L---GADY-VSEMKDAESLINKLTDGLGASIAI  243 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-H---TCSE-EECHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-h---CCCE-EeccccchHHHHHhhcCCCccEEE
Confidence            5679999999 99999999988888  9999999999888766543 2   1111 124333 2223322113 699999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      .++|..                  ......++.++.+ +++|.++..
T Consensus       244 d~~g~~------------------~~~~~~~~~l~~~-G~iv~~g~~  271 (344)
T 2h6e_A          244 DLVGTE------------------ETTYNLGKLLAQE-GAIILVGME  271 (344)
T ss_dssp             ESSCCH------------------HHHHHHHHHEEEE-EEEEECCCC
T ss_pred             ECCCCh------------------HHHHHHHHHhhcC-CEEEEeCCC
Confidence            998742                  1223445555543 577777653

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.00092  Score=58.77  Aligned_cols=75  Identities=21%  Similarity=0.164  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~  154 (250)
                      .+++|||.|+ |+||...++.+...|+ +|+++++++++++.+.+ +   +++  ..|..+.+.+.+.+   .  .++|+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~--~i~~~~~~~~~~~v~~~t~g~g~Dv  257 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---GFE--IADLSLDTPLHEQIAALLGEPEVDC  257 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCE--EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-c---CCc--EEccCCcchHHHHHHHHhCCCCCCE
Confidence            5789999995 9999999988878899 68999999988776543 2   334  25665544332222   2  26999


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      +|.++|..
T Consensus       258 vid~~G~~  265 (398)
T 1kol_A          258 AVDAVGFE  265 (398)
T ss_dssp             EEECCCTT
T ss_pred             EEECCCCc
Confidence            99999853

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.21  E-value=0.0002  Score=60.25  Aligned_cols=41  Identities=12%  Similarity=0.052  Sum_probs=36.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .++|.|.| +|.+|..++..|++.|++|++.+|++++++...
T Consensus         4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            46899998 499999999999999999999999998776554

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.00061  Score=59.62  Aligned_cols=75  Identities=19%  Similarity=0.234  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCC--CccCcchhh---h-C-CC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR--NPKDLDPAI---F-E-GV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~--d~~~~~~~~---~-~-~~  152 (250)
                      .+++|||+| +|++|...++.+...| ++|+++++++++.+.+.+ +   +... ..|..  +.+++.+.+   . + ++
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-I---GADL-TLNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-T---TCSE-EEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-c---CCcE-EEeccccCcchHHHHHHHHhCCCCC
Confidence            467999999 8999999999888899 599999999988776543 2   2221 23544  122222221   2 2 69


Q ss_pred             cEEEEcCcC
Q 025619          153 THVICCTGT  161 (250)
Q Consensus       153 D~vi~~Ag~  161 (250)
                      |+||.++|.
T Consensus       269 Dvvid~~g~  277 (380)
T 1vj0_A          269 DFILEATGD  277 (380)
T ss_dssp             EEEEECSSC
T ss_pred             cEEEECCCC
Confidence            999999974

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.17  E-value=0.00033  Score=60.22  Aligned_cols=110  Identities=10%  Similarity=0.122  Sum_probs=67.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +.++|.|+|| |.+|..++..|+..+.  +|+++++++++++....++.+     ..+.+. .|     . .++ +.+.|
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~-----~-~~a-~~~aD   78 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA-----E-YSD-AKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC-----C-GGG-GGGCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC-----C-HHH-hCCCC
Confidence            4468999998 9999999999998875  799999998877553222111     122222 21     1 223 67899


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS  202 (250)
                      +||..+|....+..   ...+....|..-...+.+.++  .....++++|-
T Consensus        79 vVii~ag~~~k~g~---~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           79 LVVITAGAPQKPGE---TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EEEEcCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99999987543221   111233556666677776653  22345666544

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=97.13  E-value=0.00052  Score=58.36  Aligned_cols=68  Identities=12%  Similarity=0.095  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+|| |++|...++.+...|++|++++ ++++.+.+.+ +   +...+. |  |   .++ +-+++|++|.++|
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-l---Ga~~v~-~--d---~~~-v~~g~Dvv~d~~g  208 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-R---GVRHLY-R--E---PSQ-VTQKYFAIFDAVN  208 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-H---TEEEEE-S--S---GGG-CCSCEEEEECC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-c---CCCEEE-c--C---HHH-hCCCccEEEECCC
Confidence            5789999999 9999999988888899999999 7777665543 2   333322 3  2   332 2457999999987


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       209 ~  209 (315)
T 3goh_A          209 S  209 (315)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.13  E-value=0.00048  Score=60.55  Aligned_cols=44  Identities=16%  Similarity=0.018  Sum_probs=38.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .+.+++|+|+|+ |.+|..+++.+...|++|++++|++++.+.+.
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            357899999995 99999999999999999999999987766544

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.13  E-value=0.0003  Score=61.62  Aligned_cols=76  Identities=25%  Similarity=0.260  Sum_probs=53.5

Q ss_pred             CCCEEEEEc-CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhh-hCCCcEE
Q 025619           81 SSKLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI-FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTG-asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~-~~~~D~v  155 (250)
                      .+.+|||.| |+|++|...++.+...|++|+++++++++.+.+.+ +.   .. ...|..+.+.   +.+.. -.++|++
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lG---a~-~~~~~~~~~~~~~v~~~t~~~g~d~v  244 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QG---AV-HVCNAASPTFMQDLTEALVSTGATIA  244 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TT---CS-CEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CC---Cc-EEEeCCChHHHHHHHHHhcCCCceEE
Confidence            356899997 99999999999888889999999999988776553 21   11 1235444332   22211 1379999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |.++|.
T Consensus       245 ~d~~g~  250 (379)
T 3iup_A          245 FDATGG  250 (379)
T ss_dssp             EESCEE
T ss_pred             EECCCc
Confidence            999985

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.13  E-value=0.0028  Score=53.68  Aligned_cols=67  Identities=19%  Similarity=0.135  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |.++|-+.| -|-+|..+++.|++.|++|++.+|++++.+.+.+    .+...       .++..++ ..+.|+||-+..
T Consensus         4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~----~G~~~-------~~s~~e~-~~~~dvvi~~l~   70 (297)
T 4gbj_A            4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK----LGATV-------VENAIDA-ITPGGIVFSVLA   70 (297)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT----TTCEE-------CSSGGGG-CCTTCEEEECCS
T ss_pred             CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCeE-------eCCHHHH-HhcCCceeeecc
Confidence            345788887 7999999999999999999999999998876653    23322       1334443 567899998753

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.10  E-value=0.00043  Score=61.26  Aligned_cols=43  Identities=21%  Similarity=0.209  Sum_probs=38.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      +.+++|+|+|+ |.||..+++.+...|++|++++|++++++.+.
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~  212 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ  212 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            46889999995 99999999999999999999999998776653

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.08  E-value=0.00044  Score=60.35  Aligned_cols=75  Identities=23%  Similarity=0.237  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch------hhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~------~~~~~~D  153 (250)
                      .+++|||+|| |++|...++.+...|+ +|+++++++++.+.+.+ +   ++. ...|..+.+..+.      ..-+++|
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~-~vi~~~~~~~~~~i~~~~~~~~gg~D  255 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE-V---GAT-ATVDPSAGDVVEAIAGPVGLVPGGVD  255 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-H---TCS-EEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-c---CCC-EEECCCCcCHHHHHHhhhhccCCCCC
Confidence            4679999998 9999999998888999 89999999888765432 2   121 1245544332221      1123799


Q ss_pred             EEEEcCcC
Q 025619          154 HVICCTGT  161 (250)
Q Consensus       154 ~vi~~Ag~  161 (250)
                      +||.++|.
T Consensus       256 vvid~~G~  263 (370)
T 4ej6_A          256 VVIECAGV  263 (370)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.07  E-value=0.00057  Score=60.35  Aligned_cols=74  Identities=20%  Similarity=0.161  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~  154 (250)
                      .+.+|||+|| |++|...++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+.+ +.+.+   .  .++|+
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~~-vi~~~~~~-~~~~i~~~t~g~g~D~  285 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-L---GADH-VIDPTKEN-FVEAVLDYTNGLGAKL  285 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-H---TCSE-EECTTTSC-HHHHHHHHTTTCCCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-c---CCCE-EEcCCCCC-HHHHHHHHhCCCCCCE
Confidence            5789999998 9999999998888999 89999999988775543 2   1221 23544433 22222   2  26999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       286 vid~~g~  292 (404)
T 3ip1_A          286 FLEATGV  292 (404)
T ss_dssp             EEECSSC
T ss_pred             EEECCCC
Confidence            9999874

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.07  E-value=0.002  Score=55.09  Aligned_cols=98  Identities=18%  Similarity=0.204  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcC----C--CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~----~--~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      +.++|.|+|+ |.+|..++..|+..|.  +|+++++++++++.....+    .  ...+.+. .|  +    .++ +.+.
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~----~~a-l~~a   75 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--D----YDD-CRDA   75 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--C----GGG-TTTC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--c----HHH-hCCC
Confidence            3468999998 9999999999988874  7999999987655422111    1  1123322 11  1    223 6789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      |+||.+++....+..   ...+....|..-...+.+.+
T Consensus        76 DvViia~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i  110 (316)
T 1ldn_A           76 DLVVICAGANQKPGE---TRLDLVDKNIAIFRSIVESV  110 (316)
T ss_dssp             SEEEECCSCCCCTTT---CSGGGHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCCCCCCCC---CHHHHHHcChHHHHHHHHHH
Confidence            999999988654322   11223455666566666655

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.06  E-value=0.0012  Score=57.21  Aligned_cols=75  Identities=15%  Similarity=0.178  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCC--CccCcchhh---h-CCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTR--NPKDLDPAI---F-EGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~--d~~~~~~~~---~-~~~D  153 (250)
                      .+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +   +.. ...|..  |.+++.+.+   . +++|
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~-~vi~~~~~~~~~~~~~i~~~~~~g~D  244 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-I---GAD-LVLQISKESPQEIARKVEGQLGCKPE  244 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCS-EEEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---CCC-EEEcCcccccchHHHHHHHHhCCCCC
Confidence            5679999996 9999999988888899 89999999888766542 2   222 123544  212221111   1 4799


Q ss_pred             EEEEcCcC
Q 025619          154 HVICCTGT  161 (250)
Q Consensus       154 ~vi~~Ag~  161 (250)
                      ++|.++|.
T Consensus       245 ~vid~~g~  252 (356)
T 1pl8_A          245 VTIECTGA  252 (356)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999874

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.05  E-value=0.00052  Score=58.56  Aligned_cols=108  Identities=15%  Similarity=0.098  Sum_probs=67.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|+|| |.+|..++..|+..+  .+|+++++++++++....++.+     ..+.+. .|     + .++ +.+.|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~-----~-~~a-~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG-----S-YGD-LEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC-----C-GGG-GTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC-----C-HHH-hCCCCEE
Confidence            47999998 999999999999887  5899999998877653222211     122222 21     2 223 6889999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSS  202 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS  202 (250)
                      |..+|....+..   ...+....|..-...+.+.++  .....++++|-
T Consensus        72 ii~ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           72 VLAAGVAQRPGE---TRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EECCCCCCCCCc---CHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            999987543221   111233556666666776653  22345666544

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.05  E-value=0.00044  Score=55.91  Aligned_cols=43  Identities=16%  Similarity=0.315  Sum_probs=37.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEE-EecChhhHhhhhC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFG  124 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~-~~R~~~~~~~~~~  124 (250)
                      ++++|.|.| +|.+|.++++.|++.|++|++ .+|++++.+.+.+
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~   65 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD   65 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH
Confidence            456899999 899999999999999999999 8999988776543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.04  E-value=0.00049  Score=60.22  Aligned_cols=76  Identities=20%  Similarity=0.089  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeC------------------CCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT------------------RNP  141 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl------------------~d~  141 (250)
                      ..+++|+|.|+ |.+|..+++.+...|++|++++|++++++.+.+.    +.+++..|+                  .+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l----Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV----GAQWLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT----TCEECCCC-------------CHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCeEEeccccccccccchhhhhHHHHhhhH
Confidence            35789999997 9999999999999999999999999887765431    233332221                  011


Q ss_pred             cCcchhhhCCCcEEEEcCcC
Q 025619          142 KDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus       142 ~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +.+.++ +.+.|+||.++..
T Consensus       257 ~~l~e~-l~~aDIVI~tv~i  275 (381)
T 3p2y_A          257 QALEDA-ITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHH-HTTCSEEEECCCC
T ss_pred             HHHHHH-HhcCCEEEECCCC
Confidence            233332 6889999988754

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=97.03  E-value=0.0012  Score=60.93  Aligned_cols=73  Identities=18%  Similarity=0.203  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..++++|.|+ |-+|+.++++|.+.|++|++++.+++..+.+.+.   .++.++.+|.+|++.++++-..+.|.||-
T Consensus       126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~  198 (565)
T 4gx0_A          126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ---EGFKVVYGSPTDAHVLAGLRVAAARSIIA  198 (565)
T ss_dssp             CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS---CSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred             cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence            4468999995 7899999999999999999999999988776532   26889999999999998765678898885

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.01  E-value=0.00046  Score=58.33  Aligned_cols=37  Identities=30%  Similarity=0.338  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      .++.++|+|.| .||+|.++++.|++.|. ++.+++++.
T Consensus        33 kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           33 KIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            45778999998 59999999999999996 789988765

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.00  E-value=0.0013  Score=56.74  Aligned_cols=76  Identities=14%  Similarity=0.113  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEE------EeeCC-CccCcchhhhCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVC------KGDTR-NPKDLDPAIFEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v------~~Dl~-d~~~~~~~~~~~~D~  154 (250)
                      .++|.|.|+ |.+|..++..|++.|++|++++|++++.+.+.+..   ++.+.      ...+. ...+.+++ ..++|+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~   78 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGLA-VKDADV   78 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHHH-HTTCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHHHH-HhcCCE
Confidence            358999995 99999999999999999999999998877664321   11110      01110 11233333 568999


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      ||.+....
T Consensus        79 vi~~v~~~   86 (359)
T 1bg6_A           79 ILIVVPAI   86 (359)
T ss_dssp             EEECSCGG
T ss_pred             EEEeCCch
Confidence            99887543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.00072  Score=58.89  Aligned_cols=75  Identities=11%  Similarity=0.020  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC---cchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~---~~~~~~~~~D~vi  156 (250)
                      .+++|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   +... ..|..+.+.   +.+..-+++|+||
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~~-vi~~~~~~~~~~~~~~~~gg~D~vi  263 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-L---GATH-VINSKTQDPVAAIKEITDGGVNFAL  263 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-H---TCSE-EEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-c---CCCE-EecCCccCHHHHHHHhcCCCCcEEE
Confidence            5679999995 9999999988777898 69999999888766542 2   1221 235544322   2221123799999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .++|.
T Consensus       264 d~~g~  268 (371)
T 1f8f_A          264 ESTGS  268 (371)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99873

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.98  E-value=0.0016  Score=56.78  Aligned_cols=96  Identities=21%  Similarity=0.258  Sum_probs=57.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCc---CCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..+|.|.||+|.||+.+++.|.++.. +++++.+..+......+.   +.. .+   ..|+.-.+  ++ .++++|+||.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~-~v---~~dl~~~~--~~-~~~~vDvVf~   88 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRA-QK---LPTLVSVK--DA-DFSTVDAVFC   88 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTT-SC---CCCCBCGG--GC-CGGGCSEEEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcC-cc---cccceecc--hh-HhcCCCEEEE
Confidence            35899999999999999999998764 777776543222111111   111 11   13333222  32 2568999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      +++...                   +...+..++.| .++|-.|+..
T Consensus        89 atp~~~-------------------s~~~a~~~~aG-~~VId~sa~~  115 (359)
T 1xyg_A           89 CLPHGT-------------------TQEIIKELPTA-LKIVDLSADF  115 (359)
T ss_dssp             CCCTTT-------------------HHHHHHTSCTT-CEEEECSSTT
T ss_pred             cCCchh-------------------HHHHHHHHhCC-CEEEECCccc
Confidence            986432                   23445544334 4677777754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.97  E-value=0.00067  Score=58.34  Aligned_cols=98  Identities=11%  Similarity=0.121  Sum_probs=61.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      .++|.|.|| |.+|..++..|+..|+ +|++.++++++++.....+.      .....+..     ..+.+ + +.+.|+
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~~-a-l~~aD~   85 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-----ENNYE-Y-LQNSDV   85 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESCGG-G-GTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-----CCCHH-H-HCCCCE
Confidence            358999998 9999999999999998 99999999877664221110      01111111     12232 3 578999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      ||.++|....+..   ...+....|..-...+.+.+
T Consensus        86 VI~avg~p~k~g~---tr~dl~~~n~~i~~~i~~~i  118 (328)
T 2hjr_A           86 VIITAGVPRKPNM---TRSDLLTVNAKIVGSVAENV  118 (328)
T ss_dssp             EEECCSCCCCTTC---CSGGGHHHHHHHHHHHHHHH
T ss_pred             EEEcCCCCCCCCC---chhhHHhhhHHHHHHHHHHH
Confidence            9999986542221   11123344666666666655

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.97  E-value=0.0012  Score=54.51  Aligned_cols=36  Identities=25%  Similarity=0.258  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      +++++|+|.|+ ||+|.++++.|++.|. ++++++++.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~   62 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDD   62 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            45679999996 8899999999999997 688887653

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.95  E-value=0.0079  Score=51.27  Aligned_cols=35  Identities=17%  Similarity=0.081  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~  116 (250)
                      ++++|.|.| .|.+|..+++.|++.| ++|++.+|++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            346899999 7999999999999999 9999999997

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.95  E-value=0.0047  Score=52.90  Aligned_cols=101  Identities=13%  Similarity=0.161  Sum_probs=61.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      +++|.|.|| |.+|..++..|+..|+ +|+++++++++++.....+.      .....+..     ..+.+ + +.+.|+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-----t~d~~-a-l~~aD~   75 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-----SNTYD-D-LAGADV   75 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-----ECCGG-G-GTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE-----CCCHH-H-hCCCCE
Confidence            358999998 9999999999999998 99999999877654322111      01111111     12232 3 678999


Q ss_pred             EEEcCcCCCcCCCCCCC--CCCcceehHHHHHHHHHHc
Q 025619          155 VICCTGTTAFPSRRWDG--DNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~--~~~~~~~N~~g~~~l~~a~  190 (250)
                      ||.++|....+....+.  ..+....|..-.+.+.+.+
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i  113 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI  113 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence            99999865422211000  1122344555556666655

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.93  E-value=0.0034  Score=53.97  Aligned_cols=70  Identities=10%  Similarity=0.054  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..+.+|+|.|.|. |.||+.+++.|...|++|++.+|+.++.+...+    .++..     .   +++++ +.+.|+|+.
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~----~g~~~-----~---~l~e~-l~~aDvVi~  216 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE----FQAEF-----V---STPEL-AAQSDFIVV  216 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT----TTCEE-----C---CHHHH-HHHCSEEEE
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh----cCcee-----C---CHHHH-HhhCCEEEE
Confidence            3578999999995 999999999999999999999998765443321    12221     1   23333 567899998


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +...
T Consensus       217 ~vp~  220 (330)
T 2gcg_A          217 ACSL  220 (330)
T ss_dssp             CCCC
T ss_pred             eCCC
Confidence            7743

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.93  E-value=0.0005  Score=59.58  Aligned_cols=75  Identities=16%  Similarity=0.252  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh----hHhhhhCcCCCCCeeEEEeeCCC--ccCcchhhh--CCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQDEETLQVCKGDTRN--PKDLDPAIF--EGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~----~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~--~~~  152 (250)
                      .+++|||+||+|++|...++.+...|++|+++.+..+    +.+.+ +.+.. . .++  |..+  .+.+.+..-  +++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~-~~lGa-~-~vi--~~~~~~~~~~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL-KSLGA-E-HVI--TEEELRRPEMKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH-HHTTC-S-EEE--EHHHHHSGGGGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH-HhcCC-c-EEE--ecCcchHHHHHHHHhCCCCc
Confidence            5789999999999999999887778999888876532    22222 22211 1 122  3221  123433211  258


Q ss_pred             cEEEEcCc
Q 025619          153 THVICCTG  160 (250)
Q Consensus       153 D~vi~~Ag  160 (250)
                      |++|.++|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999987

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.91  E-value=0.0016  Score=58.41  Aligned_cols=77  Identities=19%  Similarity=0.154  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCC-CcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG-VTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~-~D~vi~  157 (250)
                      ++++|+|+|.|. |+.|.++|+.|.++|++|.+.+++........+.+...++++..+.-  ++   + .+.+ +|.||.
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~--~~---~-~~~~~~d~vv~   78 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH--PL---E-LLDEDFCYMIK   78 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCC--CG---G-GGGSCEEEEEE
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCC--hH---H-hhcCCCCEEEE
Confidence            567899999998 89999999999999999999998653111111111123565554432  11   1 2344 899999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      ..|+.
T Consensus        79 spgi~   83 (451)
T 3lk7_A           79 NPGIP   83 (451)
T ss_dssp             CTTSC
T ss_pred             CCcCC
Confidence            98874

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.91  E-value=0.0022  Score=55.75  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh-------------------hHhhhhCcCC--CC--CeeEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD--EE--TLQVCK  135 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~-------------------~~~~~~~~~~--~~--~~~~v~  135 (250)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++.-                   |.+.+++.+.  .+  +++.+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            35679999995 9999999999999997 7999988631                   1122211111  23  455666


Q ss_pred             eeCCCccCcchhhhCCCcEEEEcC
Q 025619          136 GDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus       136 ~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++++..++..  +.+.|+||.+.
T Consensus       195 ~~i~~~~~~~~--~~~~DlVvd~~  216 (353)
T 3h5n_A          195 LNINDYTDLHK--VPEADIWVVSA  216 (353)
T ss_dssp             CCCCSGGGGGG--SCCCSEEEECC
T ss_pred             cccCchhhhhH--hccCCEEEEec
Confidence            77776655654  68899999875

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.90  E-value=0.0047  Score=52.41  Aligned_cols=96  Identities=17%  Similarity=0.168  Sum_probs=62.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ++|.|.| +|.+|..++..|++.|  ++|++++|++++++.+...+.      ...+.+..   +|   .+ + +.+.|+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d---~~-~-~~~aDv   72 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---ND---WA-A-LADADV   72 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SC---GG-G-GTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CC---HH-H-hCCCCE
Confidence            5899999 7999999999999999  799999999887765542211      11222211   22   22 3 578999


Q ss_pred             EEEcCcCCCc----CCCCCCCCCCcceehHHHHHHHHHHc
Q 025619          155 VICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       155 vi~~Ag~~~~----~~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      ||.+++....    +..   ...+....|..-...+++.+
T Consensus        73 Viiav~~~~~~~~~~g~---~r~~l~~~n~~i~~~i~~~i  109 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTG---DRFAELKFTSSMVQSVGTNL  109 (309)
T ss_dssp             EEECCSCGGGTC----------CTTHHHHHHHHHHHHHHH
T ss_pred             EEEecCCcccCCCCCCC---CHHHHHHHHHHHHHHHHHHH
Confidence            9999886542    211   12234456776666777666

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.90  E-value=0.0016  Score=56.93  Aligned_cols=71  Identities=11%  Similarity=0.121  Sum_probs=53.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+.+|+|+|.| +|.+|+.+++.+.+.|++|++++.+++......      --..+..|..|.+.+.++ ..++|+|.-
T Consensus         9 ~~~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~------ad~~~~~~~~d~~~l~~~-~~~~dvi~~   79 (377)
T 3orq_A            9 LKFGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV------AHEFIQAKYDDEKALNQL-GQKCDVITY   79 (377)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG------SSEEEECCTTCHHHHHHH-HHHCSEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh------CCEEEECCCCCHHHHHHH-HHhCCccee
Confidence            45789999999 588999999999999999999988765321111      113567899998888864 567898743

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.89  E-value=0.0019  Score=54.06  Aligned_cols=68  Identities=22%  Similarity=0.291  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+++++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+.   .     ++.+  ++.   ..+.|+|||+.
T Consensus       118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~---~-----~~~~--~~~---~~~~DivInaT  183 (271)
T 1npy_A          118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG---Y-----AYIN--SLE---NQQADILVNVT  183 (271)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT---C-----EEES--CCT---TCCCSEEEECS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---C-----ccch--hhh---cccCCEEEECC
Confidence            357899999 69999999999999997 79999999998888765432   1     1111  111   24689999987


Q ss_pred             cCC
Q 025619          160 GTT  162 (250)
Q Consensus       160 g~~  162 (250)
                      ...
T Consensus       184 p~g  186 (271)
T 1npy_A          184 SIG  186 (271)
T ss_dssp             STT
T ss_pred             CCC
Confidence            654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.89  E-value=0.0011  Score=54.89  Aligned_cols=43  Identities=16%  Similarity=0.326  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFG  124 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~  124 (250)
                      .+++|.|.|+ |.+|..+++.|.+.|++ |.+++|++++.+.+.+
T Consensus         9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~   52 (266)
T 3d1l_A            9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQ   52 (266)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH
T ss_pred             CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH
Confidence            3457999996 99999999999999998 8899999988776543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.88  E-value=0.0027  Score=53.70  Aligned_cols=42  Identities=19%  Similarity=0.207  Sum_probs=37.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      .++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            45788887 7999999999999999999999999988877653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.87  E-value=0.002  Score=55.02  Aligned_cols=66  Identities=15%  Similarity=0.218  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.    ++..       ..+.+++ ..+.|+||-+.
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----g~~~-------~~~~~e~-~~~aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----GATI-------HEQARAA-ARDADIVVSML   95 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCEE-------ESSHHHH-HTTCSEEEECC
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----CCEe-------eCCHHHH-HhcCCEEEEEC
Confidence            456899997 59999999999999999999999999988876542    2221       1233332 45677777765

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.0014  Score=57.74  Aligned_cols=77  Identities=10%  Similarity=0.019  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEee----------------CCCc--
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD----------------TRNP--  141 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~D----------------l~d~--  141 (250)
                      ..+.+|+|.|+ |-+|..+++.+...|++|+++++++++++.+.+.    +..++..+                ++++  
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~----G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~  262 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL----GAKFIAVEDEEFKAAETAGGYAKEMSGEYQ  262 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT----TCEECCCCC-----------------CHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCceeecccccccccccccchhhhcchhhh
Confidence            35679999997 9999999999999999999999999887665431    22222222                1221  


Q ss_pred             ----cCcchhhhCCCcEEEEcCcCC
Q 025619          142 ----KDLDPAIFEGVTHVICCTGTT  162 (250)
Q Consensus       142 ----~~~~~~~~~~~D~vi~~Ag~~  162 (250)
                          +.+.++ +.+.|+||+++...
T Consensus       263 ~~~~~~l~e~-l~~aDVVI~tvlip  286 (405)
T 4dio_A          263 VKQAALVAEH-IAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHH-HHTCSEEEECCCCS
T ss_pred             hhhHhHHHHH-hcCCCEEEECCcCC
Confidence                234433 57899999987654

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=96.86  E-value=0.0018  Score=56.09  Aligned_cols=96  Identities=11%  Similarity=0.032  Sum_probs=56.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +++|.|.||+|.||+.+++.|.++.. +++.+.++.+....+.+.... .+.  ...++.+.   + . +.++|+||.++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~--~~~~~~~~---~-~-~~~vDvV~~a~   76 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGR--TNLKFVPP---E-K-LEPADILVLAL   76 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTT--CCCBCBCG---G-G-CCCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCc--ccccccch---h-H-hcCCCEEEEcC
Confidence            35899999999999999999998754 777776643322222111000 000  01112222   2 2 36899999998


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVG  204 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~  204 (250)
                      +...                   +..+++.+ +.| .++|-.|+..
T Consensus        77 g~~~-------------------s~~~a~~~~~aG-~~VId~Sa~~  102 (345)
T 2ozp_A           77 PHGV-------------------FAREFDRYSALA-PVLVDLSADF  102 (345)
T ss_dssp             CTTH-------------------HHHTHHHHHTTC-SEEEECSSTT
T ss_pred             CcHH-------------------HHHHHHHHHHCC-CEEEEcCccc
Confidence            6432                   22334333 455 4688888754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.86  E-value=0.0024  Score=56.94  Aligned_cols=40  Identities=18%  Similarity=0.125  Sum_probs=36.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      +|.|.| +|.+|..++..|++.|++|++++|++++.+.+.+
T Consensus         2 kI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~   41 (436)
T 1mv8_A            2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (436)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence            688888 7999999999999999999999999998887654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.86  E-value=0.007  Score=54.23  Aligned_cols=41  Identities=22%  Similarity=0.205  Sum_probs=36.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      ++|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence            5788888 5999999999999999999999999998877654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.84  E-value=0.0018  Score=55.67  Aligned_cols=75  Identities=15%  Similarity=0.149  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC--ccCcchhhh-CCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIF-EGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~-~~~D~vi  156 (250)
                      .+.+|+|+|+ |++|...++.+... |.+|+++++++++.+.+.+ +   +... ..|..+  .+.+.+..- .++|++|
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-l---Ga~~-~i~~~~~~~~~v~~~t~g~g~d~v~  244 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-V---GADA-AVKSGAGAADAIRELTGGQGATAVF  244 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-T---TCSE-EEECSTTHHHHHHHHHGGGCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c---CCCE-EEcCCCcHHHHHHHHhCCCCCeEEE
Confidence            4679999998 99999988877666 7899999999988776543 2   2221 123322  112222111 2799999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .++|.
T Consensus       245 d~~G~  249 (345)
T 3jv7_A          245 DFVGA  249 (345)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99874

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.83  E-value=0.0013  Score=60.63  Aligned_cols=69  Identities=22%  Similarity=0.265  Sum_probs=59.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++++|.|+ |-+|..+++.|.+.|++|+++++++++.+++       . .++.+|.+|++.++++-.++.|.+|-..+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-------~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-------H-VVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-------S-CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-------C-CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            68999996 9999999999999999999999998876542       1 68999999999998765678999997754

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.82  E-value=0.0019  Score=52.95  Aligned_cols=39  Identities=23%  Similarity=0.322  Sum_probs=34.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~  118 (250)
                      .+.+++|.|.| .|.+|.++++.|++.|++|++.+|++++
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45778999997 8999999999999999999999999886

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.81  E-value=0.0025  Score=54.10  Aligned_cols=43  Identities=26%  Similarity=0.237  Sum_probs=38.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      ..+++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus        19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            3557899998 799999999999999999999999998877765

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.81  E-value=0.00089  Score=57.87  Aligned_cols=75  Identities=19%  Similarity=0.097  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcc---hhhh-CCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIF-EGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~---~~~~-~~~D~v  155 (250)
                      .+.+|||+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +   +.. ...|..+.+..+   +..- .++|++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-l---Ga~-~vi~~~~~~~~~~v~~~t~g~g~D~v  239 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-Y---GAT-DIINYKNGDIVEQILKATDGKGVDKV  239 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-H---TCC-EEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-h---CCc-eEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence            4678999985 9999999988888899 79999999887765443 2   121 123443332222   1111 269999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |.++|.
T Consensus       240 ~d~~g~  245 (352)
T 3fpc_A          240 VIAGGD  245 (352)
T ss_dssp             EECSSC
T ss_pred             EECCCC
Confidence            999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.79  E-value=0.0055  Score=52.24  Aligned_cols=70  Identities=17%  Similarity=0.087  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCe-eEEEeeCCCccCcchhhhCCCcEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++.++|.|.| .|.||..+++.|.+.|+  +|++.+|++++.+...+.    ++ ....      .+.++.+..++|+||
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G~~~~~~------~~~~~~~~~~aDvVi   99 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEGT------TSIAKVEDFSPDFVM   99 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEEE------SCTTGGGGGCCSEEE
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----CCcchhc------CCHHHHhhccCCEEE
Confidence            3457899999 79999999999999999  999999999887765432    11 0011      223330246789999


Q ss_pred             EcCc
Q 025619          157 CCTG  160 (250)
Q Consensus       157 ~~Ag  160 (250)
                      .+.-
T Consensus       100 lavp  103 (314)
T 3ggo_A          100 LSSP  103 (314)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8763

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.74  E-value=0.0044  Score=50.97  Aligned_cols=73  Identities=21%  Similarity=0.225  Sum_probs=52.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEEEc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVICC  158 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi~~  158 (250)
                      +|.|.|++|.+|+.+++.+.+. |++++.+....+.++++..    .+.. +..|++.++...+.+    -.++++|+-.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigT   76 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGT   76 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcC
Confidence            7999999999999999999866 8998877654444444322    1222 678999998876532    3478998876


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      .|.
T Consensus        77 TG~   79 (245)
T 1p9l_A           77 TGF   79 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            653

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.74  E-value=0.0023  Score=52.65  Aligned_cols=66  Identities=12%  Similarity=0.096  Sum_probs=48.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|.|.| .|.+|..+++.|.+.|++|.+.+|++++.+.+.+..   ++.       ...+.+++ ..++|+||.+..
T Consensus         4 m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---g~~-------~~~~~~~~-~~~~D~Vi~~v~   69 (259)
T 2ahr_A            4 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL---ALP-------YAMSHQDL-IDQVDLVILGIK   69 (259)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH---TCC-------BCSSHHHH-HHTCSEEEECSC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc---CCE-------eeCCHHHH-HhcCCEEEEEeC
Confidence            4799999 799999999999999999999999998877655322   111       11223333 457888888775

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.73  E-value=0.0027  Score=55.21  Aligned_cols=44  Identities=16%  Similarity=0.071  Sum_probs=38.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      +++++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~   63 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER   63 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            4567899998 7999999999999999999999999998877653

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.72  E-value=0.0029  Score=56.91  Aligned_cols=104  Identities=17%  Similarity=0.266  Sum_probs=77.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      -|+|+|.| .|-||..+|+.| +++++|.++.+++++.+.+.+++  ++..++.+|-+|++-++++-....|++|-..+-
T Consensus       235 ~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l--~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~  310 (461)
T 4g65_A          235 YRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL--ENTIVFCGDAADQELLTEENIDQVDVFIALTNE  310 (461)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC--TTSEEEESCTTCHHHHHHTTGGGCSEEEECCSC
T ss_pred             ccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC--CCceEEeccccchhhHhhcCchhhcEEEEcccC
Confidence            46899988 588999999987 56799999999999999887765  467889999999998887656789999976531


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                                    -+.|+......-   +.|++++|-.-.-..|
T Consensus       311 --------------De~Ni~~~llAk---~~gv~kvIa~vn~~~~  338 (461)
T 4g65_A          311 --------------DETNIMSAMLAK---RMGAKKVMVLIQRGAY  338 (461)
T ss_dssp             --------------HHHHHHHHHHHH---HTTCSEEEEECSCHHH
T ss_pred             --------------cHHHHHHHHHHH---HcCCccccccccccch
Confidence                          166776543321   3477777765444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	250
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-12
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	1e-10
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-07
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-07
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-05
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-05
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	7e-05
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-04
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	5e-04
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	6e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	6e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	9e-04
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	0.001
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.002
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.002
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.003
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	0.003
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.003
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	0.003
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.004

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 62.4 bits (150), Expect = 6e-12
 Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 2/102 (1%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K + V G +G  G  ++    +     R  +   +       +     + + +G   N  
Sbjct: 4   KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAI-PNVTLFQGPLLNNV 62

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVR 184
            L   +FEG  H+     T+        G +  +     G  
Sbjct: 63  PLMDTLFEGA-HLAFINTTSQAGDEIAIGKDLADAAKRAGTI 103

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (136), Expect = 1e-10
 Identities = 21/162 (12%), Positives = 45/162 (27%), Gaps = 14/162 (8%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + K + + G +G  G   +A  +    +  +L+RD  +        +             
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVL 56

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
                     G   VI   GT    S           +       + +     + ++V  
Sbjct: 57  QAADVDKTVAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVAC 109

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTII 242
           +S       +       L  V          +++SGL +  +
Sbjct: 110 TS--AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAV 149

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 20/181 (11%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-----DPEKATTLFGKQDE--ETLQVC 134
           SK+ L+ G +G  G  +   LL +  +   + R     + E+   ++           + 
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
            GD  +  +L   + E     +   G  +  +  ++       VD  G   L+ A+    
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120

Query: 191 PSSLKRIVLVSSVGV------TKFNE-LPWSIMNLFGVLKY--KKMGEDFVQKSGLPFTI 241
                R    S+  +          E  P+   + + V K     +  ++ +  G+    
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACN 180

Query: 242 I 242
            
Sbjct: 181 G 181

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 49.0 bits (115), Expect = 2e-07
 Identities = 33/144 (22%), Positives = 43/144 (29%), Gaps = 13/144 (9%)

Query: 73  DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET-- 130
           D+ V P     LVLV G +G V   VV  LL    K R   R   K   L  + D +   
Sbjct: 4   DNAVLP--EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG 61

Query: 131 --LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
                   D       D  I                     +  +        G  N + 
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIA-----SVVSFSNKYDEVVTPAIGGTLNALR 116

Query: 188 -SALPSSLKRIVLVSSVGVTKFNE 210
            +A   S+KR VL SS       +
Sbjct: 117 AAAATPSVKRFVLTSSTVSALIPK 140

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 6e-06
 Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 21/181 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--------EKATTLFGKQDEETLQVC 134
            + L+ G +G  G  +   LL +  +   ++R          E          E  +++ 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
            GD  +   L   I E     I   G  +     +D       VD  G   L+ A+    
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121

Query: 191 PSSLKRIVLVSSVGV------TKFNE-LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTI 241
             +  +    S+  +          E  P+   + +G  K     +  +F +   L    
Sbjct: 122 LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 181

Query: 242 I 242
            
Sbjct: 182 G 182

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 43.2 bits (100), Expect = 1e-05
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 2/118 (1%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLL--LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           +L+ GG G +G  + +  LS+ I   +   L        L         +   GD RN  
Sbjct: 3   LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
           D+   I + +             +   D      +++  G  NL+ A+        ++
Sbjct: 63  DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 42.5 bits (98), Expect = 2e-05
 Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 17/167 (10%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQDEETLQVCKGDTRN 140
           VL+ GG+G +G+ +V + +S    + +L R    +      +     +   ++ +     
Sbjct: 6   VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS--- 62

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
                  + +    V          S    G  +   ++   +    +   +   +  L 
Sbjct: 63  -------LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVE--AIKEAGNIKRFLP 113

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFTIISLCIY 247
           S  G+                   K+     ++ + +P+T +S  ++
Sbjct: 114 SEFGMDPDIMEHALQPG-SITFIDKRKVRRAIEAASIPYTYVSSNMF 159

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 6/94 (6%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-----QVCK 135
           S   +L+ G +G +G+ V  + L     + LL+R+   ++     Q  E+       +  
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
           G   +   L     + V  VI   G+    S+  
Sbjct: 62  GSIDDHASLVE-AVKNVDVVISTVGSLQIESQVN 94

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K +L+ GG+G VG  +   L+    +  ++    +   T   +  E  +     +  N  
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVV----DNFFTGRKRNVEHWIGHENFELINHD 57

Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
            ++P ++  V  +       + P+  ++   T  K +  G  N++        R++L S+
Sbjct: 58  VVEP-LYIEVDQIYHLASPASPPNYMYNPIKT-LKTNTIGTLNMLGLAKRVGARLLLAST 115

Query: 203 VGVTKFNEL------------PWSIMNLFGVLKY--KKMGEDFVQKSGLPFTII 242
             V    E+            P      +   K   + M   ++++ G+   + 
Sbjct: 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 169

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 33/176 (18%), Positives = 58/176 (32%), Gaps = 20/176 (11%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLL--------LRDPEKATTLFGKQDEETLQVCKG 136
           +LV GG+G +G   V  LL+                L        L     +  L+   G
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62

Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
           D R+      A        I      +   R   G +   + + +G + L+  A+ + + 
Sbjct: 63  DIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 196 RIVLVSSVGV------TKFNE-LPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTII 242
           R+V VS+  V        + E  P    + +   K     +   + +  GL   I 
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.6 bits (93), Expect = 8e-05
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGK 125
           ++   VLV G SG  GQ+V   L   +    ++ L+R  +    + G+
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE 48

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (93), Expect = 1e-04
 Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEKATTLFGKQDEETLQVCKGDT 138
           SK+VLV GG+G +G   V  L+       +   L      +        +  +   + D 
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
            + K L+    E     +                      +  G   L+  
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLEL 111

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 19/178 (10%), Positives = 48/178 (26%), Gaps = 34/178 (19%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + + V +AG  G VG  +   L  R     +L    E                   +  +
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLD 42

Query: 141 PKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIV 198
            + +      E +  V                       +     N++ +A  + + +++
Sbjct: 43  SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 102

Query: 199 LVSSVGV------------TKFNELPWSIMNLFGVLKYK--KMGEDFVQKSGLPFTII 242
            + S  +                         + + K    K+ E + ++ G  +  +
Sbjct: 103 FLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSV 160

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 22/175 (12%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           + + G  G +   +   L                       +D    +    D R  ++ 
Sbjct: 18  ISITGAGGFIASHIARRLKHEGHYVIASDW----KKNEHMTEDMFCDEFHLVDLRVMENC 73

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
              + EGV HV                 +     +     N++ +A  + +KR    SS 
Sbjct: 74  LK-VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132

Query: 204 GVTKFNELPWSIM--------------NLFGVLKYK--KMGEDFVQKSGLPFTII 242
            +    +   +                + FG+ K    ++ + + +  G+   I 
Sbjct: 133 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIG 187

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 39.5 bits (91), Expect = 2e-04
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 9/119 (7%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
           S   V+V G + G+G  +V  L+       ++   RD EKAT L   +D   + V     
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-VHVLPLTV 60

Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191
              K LD  +             +         S   + +     +  +   N  S + 
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 20/163 (12%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           + VL+ GG+ G+G+ +V   ++   K  +L +  E+   L     +  L    GD R+ +
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVL-GIVGDVRSLE 64

Query: 143 DLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGV--RNLVS------ 188
           D   A       F  +  +I   G   + +   D         ++ V   N+        
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124

Query: 189 -ALPSSLKR----IVLVSSVGVTKFNELPWSIMNLFGVLKYKK 226
             LP+ +      I  +S+ G       P        ++   +
Sbjct: 125 ACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVR 167

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 1/108 (0%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-GKQDEETLQVCKGDTRNP 141
           K V V G +G  G  +   L +     +          +LF   +  + +Q   GD R+ 
Sbjct: 9   KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 68

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
             L  +I E    ++            +         +  G   L+ A
Sbjct: 69  NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEA 116

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.8 bits (86), Expect = 5e-04
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 9/89 (10%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
           + K VL+AG +G  G+ ++  +LS    ++++            ++              
Sbjct: 1   TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP---------ARKALAEHPRLDNPVGP 51

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
             +L P +   +    CC GTT   +   
Sbjct: 52  LAELLPQLDGSIDTAFCCLGTTIKEAGSE 80

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 6e-04
 Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 22/162 (13%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDT 138
           +L LV G SGG+G  V  +L+ + +K     R        A          TL   + D 
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 70

Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAF-PSRRWDGDNTPEKVD---WEGVRNLVS 188
            N +D+            GV   I   G                +  +            
Sbjct: 71  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130

Query: 189 ALPSSLK------RIVLVSSVGVTKFNELPWSIMNLFGVLKY 224
           A  S  +       I+ ++S+       LP S+ + +   KY
Sbjct: 131 AYQSMKERNVDDGHIININSMSG--HRVLPLSVTHFYSATKY 170

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (86), Expect = 6e-04
 Identities = 15/100 (15%), Positives = 31/100 (31%)

Query: 81  SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
            +K V + G SG  G++++  +L + + S++ L    K T           +V   +  +
Sbjct: 13  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 72

Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW 180
                    +     +  T   A        D        
Sbjct: 73  DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSA 112

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.6 bits (86), Expect = 9e-04
 Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 19/180 (10%)

Query: 80  SSSKLVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQDEETLQ 132
           +  K+ L+ G +G +G  ++ +LL  + K       +    R+ ++  +L  ++     +
Sbjct: 14  AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73

Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-- 190
             +GD RN  D + A       +      +   S   +   T    + +G  N++ A   
Sbjct: 74  FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRS--INDPITSNATNIDGFLNMLIAARD 131

Query: 191 PSSLKRIVLVSSVGVTKFNELPWS------IMNLFGVLKY--KKMGEDFVQKSGLPFTII 242
                     SS        LP         ++ + V KY  +   + F +  G     +
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGL 191

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 82  SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP 141
           +K+ ++ G SGG+GQ +   L +  + SRL L D      +                   
Sbjct: 1   AKVAVL-GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLG 58

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLV 200
            +  P   +G   V+   G    P +     +     +   V  L +A        ++ +
Sbjct: 59  PEQLPDCLKGCDVVVIPAG---VPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI 115

Query: 201 SSVGVTKFNELPWSIMNLFGVLKYKK 226
            S  V     +   +    GV    K
Sbjct: 116 ISNPVNSTIPITAEVFKKHGVYNPNK 141

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 36.9 bits (83), Expect = 0.002
 Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 2/85 (2%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
           VL+ G +G +G  +   LL  +      L     A + F           +GD     + 
Sbjct: 3   VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH--FHFVEGDISIHSEW 60

Query: 145 DPAIFEGVTHVICCTGTTAFPSRRW 169
                +    V+             
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTR 85

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 15/141 (10%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K V++ GG+ G+G       ++   +  L     E+      ++  +  +    D    +
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-RELGDAARYQHLDVTIEE 64

Query: 143 DLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEK---VDWEGVRNLVSALPSS 193
           D    +      F  V  ++   G +       +      K   ++  GV   +  +  +
Sbjct: 65  DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124

Query: 194 LK-----RIVLVSSVGVTKFN 209
           +K      IV +SS       
Sbjct: 125 MKDAGGGSIVNISSAAGLMGL 145

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 22/190 (11%), Positives = 51/190 (26%), Gaps = 32/190 (16%)

Query: 85  VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET---LQVCKGDTRNP 141
           +L+ GG+G +G  VV  ++     + + +     A  L    D            D  + 
Sbjct: 3   ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62

Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----------P 191
            ++     +     +      +   R   G     + +  G   L+              
Sbjct: 63  AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDK 122

Query: 192 SSLKRIVLVSSVGV-----------------TKFNELPWSIMNLFGVLKYK--KMGEDFV 232
            +  R   +S+  V                        ++  + +   K     +   + 
Sbjct: 123 KNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWR 182

Query: 233 QKSGLPFTII 242
           +  GLP  + 
Sbjct: 183 RTYGLPTIVT 192

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 14/135 (10%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K+ LV GG+ GVG  VV  LL    K      +      L  +  E ++ V + D  +  
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV-RHDVSSEA 65

Query: 143 DLDPAI------FEGVTHVICCTGTTA---FPSRRWDGDNTPEKVDWEGVRNLVSALPSS 193
           D    +         +  ++   G        + R +  +   K++ E V        ++
Sbjct: 66  DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125

Query: 194 LK----RIVLVSSVG 204
           +K     I+ ++SV 
Sbjct: 126 MKETGGSIINMASVS 140

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 13/114 (11%), Positives = 33/114 (28%), Gaps = 6/114 (5%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK-QDEETLQVCKGDTRNP 141
           K+ ++ GG+GG+G+      +    K  +     +    +       + +     D    
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD 66

Query: 142 KDLDPAIFE-----GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190
           +D+   +       G   ++         +     +   E        N+  A 
Sbjct: 67  EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 4/110 (3%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
           K  L+ G + G+G+    + +    +  +   + E A     +       +   D  +  
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI-ALDVTDQA 64

Query: 143 DLDP---AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
            +D     + +    +       A        + T E  D     N+   
Sbjct: 65  SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGT 114

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.8 bits (81), Expect = 0.004
 Identities = 22/182 (12%), Positives = 49/182 (26%), Gaps = 22/182 (12%)

Query: 83  KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--------EKATTLFGKQDEETLQVC 134
           K+ L+ G +G  G  +   LL +  +   L+R                    ++  +++ 
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA----- 189
             D  +   L   I       +      +  +  ++  +    V   G   L+ A     
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121

Query: 190 -LPSSLKRIVLVSSVGVTKFNELPWS------IMNLFGVLKYK--KMGEDFVQKSGLPFT 240
                  +     S  +      P S        + +   K        ++ +  GL   
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFAC 181

Query: 241 II 242
             
Sbjct: 182 NG 183

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	250
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.95
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.95
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.95
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.95
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.95
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.95
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.95
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.95
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.95
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.95
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.95
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.94
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.94
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.94
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.94
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.94
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.94
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.94
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.94
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.94
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.94
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.94
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.93
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.93
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.93
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.93
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.93
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.93
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.92
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.92
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.92
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.92
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.92
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.91
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.91
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.91
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.91
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.91
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.91
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.9
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.9
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.9
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.9
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.9
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.9
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.89
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.89
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.89
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.89
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.88
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.88
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.88
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.88
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.87
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.87
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.87
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.87
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.86
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.86
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.86
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.85
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.85
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.85
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.84
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.84
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.84
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.83
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.82
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.82
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.82
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.82
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.8
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.8
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.78
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.76
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.76
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.74
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.73
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.73
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.72
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.72
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.7
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.68
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.68
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.59
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.61
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.5
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.44
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.43
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.32
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.25
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.19
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.15
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.13
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.1
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.1
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	98.06
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.06
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.04
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	98.03
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.02
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.02
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.0
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	98.0
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.97
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.94
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.9
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.8
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.79
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.78
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.77
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.7
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.69
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.68
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.64
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.64
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.63
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.6
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.59
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.59
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.58
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.58
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.57
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.56
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.56
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.52
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.52
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.52
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.51
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.5
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.49
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.49
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.47
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.44
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.43
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.42
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.4
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.39
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.37
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.36
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.3
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.24
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.22
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.22
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.19
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.19
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.18
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.17
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.14
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.12
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.11
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.01
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.9
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.83
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.79
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.79
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.72
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.68
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.67
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.64
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.56
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	96.54
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.46
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.42
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.37
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.37
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.37
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.36
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.32
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.29
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.27
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.16
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.99
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	95.99
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.91
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.91
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	95.89
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.84
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.78
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.71
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.66
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.55
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.5
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.48
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.4
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	95.28
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.23
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.19
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.17
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.16
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.13
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.08
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.07
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.01
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.98
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.97
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.95
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.89
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.89
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.89
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.85
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.84
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.83
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.74
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.7
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.58
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.52
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.43
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.38
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.32
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.32
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.24
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.24
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	94.07
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.89
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.76
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.74
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.72
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.61
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.52
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.4
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.08
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.92
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.81
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.79
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.47
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.39
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.38
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.37
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.26
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.26
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.13
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	92.1
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.02
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	91.94
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.88
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.84
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.83
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.82
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	91.73
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.26
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.23
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.14
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	91.12
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.12
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.0
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.95
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.95
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	90.71
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.68
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	90.54
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	90.48
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.36
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.28
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	90.14
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	90.02
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	89.91
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	89.83
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.58
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.48
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.39
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	89.39
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.39
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	89.23
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	88.82
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	88.8
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.52
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	88.03
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	87.57
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.45
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.35
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	87.32
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	86.72
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.46
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	86.46
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	86.44
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.38
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.06
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	85.93
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	85.91
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	85.88
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	85.83
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.7
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	85.43
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.32
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.25
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	85.2
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	85.17
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	85.14
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	84.99
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	84.97
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	84.89
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.74
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	84.71
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.51
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.23
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	84.09
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.8
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	83.49
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.49
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.45
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	83.44
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	83.21
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.19
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	82.9
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.7
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.88
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.84
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	81.73
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.6
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.5
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	81.41
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	81.25
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	81.2
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	81.07
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	80.88
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	80.82
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	80.7

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=6.5e-29  Score=205.70  Aligned_cols=165  Identities=17%  Similarity=0.167  Sum_probs=131.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .++||++|||||++|||++++++|+++|++|++++|++++++++.+++ ..++.++++|++|++++++++      ++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999999999988877665 356788999999999988654      6799


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |++|||||......   .+.++.++.+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.+|.
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~asKa  157 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----GTVACHGYTATKF  157 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHH
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc----ccccccchhhHHH
Confidence            99999999865322   111223446688999999998865     34568999999999873    3344566766554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++.++||++++|.||++-
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~  186 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVK  186 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCcc
Confidence                 344456777899999999999874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.95  E-value=7.6e-29  Score=206.46  Aligned_cols=165  Identities=14%  Similarity=0.130  Sum_probs=131.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.+++ ..++.++++|++|++++++++      ++++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999999999999999999988877665 456889999999999998754      6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.++....+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.+|.
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----~~~~~~~Y~asKa  156 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----GLALTSSYGASKW  156 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHHHHH
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----cccchhhHHHHHH
Confidence            99999999875322   111222345688999999988866     34668999999998873    3344566765554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++.++||+|++|.||++.
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~  185 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTY  185 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCccc
Confidence                 334456677889999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.95  E-value=7.8e-29  Score=206.75  Aligned_cols=165  Identities=10%  Similarity=0.128  Sum_probs=130.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++ +.++..+++|++|++++++++      ++++
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-GPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            578999999999999999999999999999999999999988877666 457888999999999998754      6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      |++|||||......   .+.++.+..+++|+.|+.++.+++     + ...++||++||.++..    +.+....|+.+|
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asK  156 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR----GEALVGVYCATK  156 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTCHHHHHHH
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc----ccccccchhhhh
Confidence            99999999865322   111223445688999999988864     2 2457999999998873    344456676555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++.++||+|++|.||++-
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~  186 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVD  186 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence            3     344456677889999999999873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.9e-29  Score=207.81  Aligned_cols=165  Identities=18%  Similarity=0.140  Sum_probs=130.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++||+++||||++|||++++++|+++|++|++++|++++++++.+++ ..+...+.+|++|++++++++      ++++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            478999999999999999999999999999999999999988877655 346788999999999988654      6799


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.++....+++|+.|+..+.+++     +++.++||++||..+..    +.+....|+.+|.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----~~~~~~~Y~asKa  155 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM----GNGGQANYAAAKA  155 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTTCHHHHHHHH
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC----CCCCCHHHHHHHH
Confidence            99999999875322   112223445688999999988876     34668999999998873    3334456665554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++.++||++++|+||++-
T Consensus       156 al~~lt~~lA~ela~~gIrVN~I~PG~i~  184 (243)
T d1q7ba_         156 GLIGFSKSLAREVASRGITVNVVAPGFIE  184 (243)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecceEe
Confidence                 334456677899999999999873

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.1e-28  Score=205.67  Aligned_cols=167  Identities=10%  Similarity=0.069  Sum_probs=130.5

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.  +.++..+++|++|++++++++      +
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999998887765543  457888999999999988654      6


Q ss_pred             CCCcEEEEcCcCCCcCCCC--CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~--~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +++|++|||||.......+  .++.+..+++|+.|+.++.+++     +.+.++||++||..+..    +.+....|+.+
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~----~~~~~~~Y~as  162 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----KNINMTSYASS  162 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----CCTTCHHHHHH
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc----cccccccchhH
Confidence            8999999999986532211  1112335588999999988865     34667999999988874    33445567665


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++.++||+|++|.||++.
T Consensus       163 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~  193 (255)
T d1fmca_         163 KAAASHLVRNMAFDLGEKNIRVNGIAPGAIL  193 (255)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEeeeCcCc
Confidence            54     344556677889999999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=2.1e-28  Score=202.44  Aligned_cols=164  Identities=14%  Similarity=0.077  Sum_probs=129.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.++.  .++..+.+|++|++++++++  ++++|+||
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC--PGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            689999999999999999999999999999999999999988877664  46788999999999988765  67899999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      ||||......   .+.+..+..+++|+.|+.++.+++     + .+.++||++||.....    +.+....|+.+|.   
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----~~~~~~~Y~asKaal~  155 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----TFPNLITYSSTKGAMT  155 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHHH
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----cCCccccccchHHHHH
Confidence            9999865322   112223445688999998888754     2 3457999999988773    3344556765554   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        .+.+..++..+||++++|.||++.
T Consensus       156 ~lt~~lA~e~~~~gIrvN~I~PG~i~  181 (242)
T d1cyda_         156 MLTKAMAMELGPHKIRVNSVNPTVVL  181 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBT
T ss_pred             HHHHHHHHHhCccCeecccCCCCCcc
Confidence              344456677889999999999873

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=3.5e-28  Score=202.15  Aligned_cols=167  Identities=17%  Similarity=0.177  Sum_probs=127.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.   +.++..+++|++|++++++++      +
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999988776554331   456788999999999988754      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   .+.++.+..+++|+.|+.++.+++     +++.++||++||..+..   .+......|+.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~---~~~~~~~~Y~a  158 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE---VTMPNISAYAA  158 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC---CCSSSCHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc---ccCccccchHH
Confidence            79999999999864321   111222445688999999888865     34668999999976542   12233456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||++++|.||++-
T Consensus       159 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~  190 (251)
T d1vl8a_         159 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYR  190 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             HHHhHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence            553     344456677899999999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.95  E-value=5.3e-28  Score=201.82  Aligned_cols=165  Identities=13%  Similarity=0.136  Sum_probs=129.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++||++|||||++|||++++++|+++|++|++++|+.++++++.+++    ...++..+++|++|++++++++      +
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999998877654432    2446788999999999998754      6


Q ss_pred             CCCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|+||||||......    .+.++.+..+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~  157 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR----GIGNQSGYA  157 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----BCSSBHHHH
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc----CCCCchHHH
Confidence            89999999999764211    112223456689999999998865     24678999999998873    344456777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++.++||+|++|+||++.
T Consensus       158 asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~  190 (258)
T d1iy8a_         158 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIW  190 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHHhCccCceEEEEeeCccc
Confidence            6654     344556677889999999999874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=2.4e-28  Score=202.70  Aligned_cols=165  Identities=13%  Similarity=0.158  Sum_probs=126.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .+++|++|||||++|||+++++.|+++|++|++++|++++ .++..+.. +.++..+++|++|++++++++      +++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999998643 22222222 457889999999999998754      689


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|++|||||......   .+.++.+..+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.+|
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~asK  156 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----KIEAYTHYISTK  156 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----CCSSCHHHHHHH
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc----cCcccccchhhh
Confidence            999999999865321   122223456689999999988866     34668999999998873    334445676655


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++.++||++++|+||++.
T Consensus       157 aal~~ltk~lA~ela~~gIrVN~I~PG~i~  186 (247)
T d2ew8a1         157 AANIGFTRALASDLGKDGITVNAIAPSLVR  186 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred             ccHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            4     344456777889999999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=6.1e-28  Score=199.64  Aligned_cols=162  Identities=12%  Similarity=0.038  Sum_probs=125.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|++++++++.+++   +.+.+++|++|++++++++      ++++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            578999999999999999999999999999999999999988876644   5778999999999998754      6799


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||......   .+.++.++.+++|+.|+.++.+++     +.+.++++++||....+     .+....|+.+|.
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~-----~~~~~~Y~asKa  153 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----NLGQANYAASMA  153 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----CTTCHHHHHHHH
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC-----CCCCcchHHHHH
Confidence            99999999865321   111223446689999999988865     34556777777754442     333456665554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++..+||+|++|+||++-
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~  182 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCccc
Confidence                 334456677889999999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5e-28  Score=200.41  Aligned_cols=164  Identities=13%  Similarity=0.100  Sum_probs=129.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      .++||++|||||++|||++++++|+++|++|++++|++++++++.+++  .++..+.+|++|++++++++  ++++|+||
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC--PGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHHHHhCCceEEE
Confidence            579999999999999999999999999999999999999988877664  36788999999999998754  67899999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH---
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY---  224 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~---  224 (250)
                      ||||......   .+.++.+..+++|+.++.++.+++     + .+.++||++||..+..    +.+....|+.+|.   
T Consensus        82 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----~~~~~~~Y~asKaal~  157 (244)
T d1pr9a_          82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----AVTNHSVYCSTKGALD  157 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----CCTTBHHHHHHHHHHH
T ss_pred             eccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----cccchhhhhhhHHHHH
Confidence            9999865322   111223445688999988887754     2 3568999999998873    3344556765554   


Q ss_pred             --HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 --KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 --k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                        .+.+..++..+||++++|+||+|.
T Consensus       158 ~lt~~lA~el~~~gIrvN~I~PG~v~  183 (244)
T d1pr9a_         158 MLTKVMALELGPHKIRVNAVNPTVVM  183 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHhCCCcEEEEEEeeCcCc
Confidence              334446667789999999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=1.4e-28  Score=204.56  Aligned_cols=167  Identities=13%  Similarity=0.103  Sum_probs=130.6

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .++++|++|||||++|||++++++|+++|++|++++|++++++++.+++.  +.++..+++|++|++++++++      +
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            36789999999999999999999999999999999999998887765443  356888999999999988654      6


Q ss_pred             CCCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|++|||||........   .++....+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----~~~~~~~Y~a  161 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----GNVGQANYSS  161 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHH
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC----CCCCCHHHHH
Confidence            8999999999986532211   1122445588999998888865     34668999999998874    2334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||++++|.||++-
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~  193 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFIS  193 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEe
Confidence            553     344456677889999999999874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-28  Score=202.68  Aligned_cols=165  Identities=15%  Similarity=0.110  Sum_probs=127.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      ++.||+++||||++|||++++++|+++|++|++++|++++++++.+++.  +.++..+.||++|++++++++      ++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999999999888765543  457889999999999988654      67


Q ss_pred             CCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|++|||||........   .+..++.+++|+.|+.++++++     +++.++||++||..+.    .+.+....|+.+
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~----~~~~~~~~Y~as  159 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH----VSVPFLLAYCSS  159 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C----CCHHHHHHHHHH
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc----CCCCCcHHHHHH
Confidence            899999999987632211   1112346689999999888865     3567899999999988    345555666655


Q ss_pred             HHH-----HHHHHHHHh---cCCCEEEEecceE
Q 025619          223 KYK-----KMGEDFVQK---SGLPFTIISLCIY  247 (250)
Q Consensus       223 k~k-----~~~e~~~~~---~gi~~~~vrPg~v  247 (250)
                      |+.     +.+..++..   .||++++|+||+|
T Consensus       160 Kaal~~~~~~La~El~~~~~~gI~V~~i~PG~v  192 (244)
T d1yb1a_         160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFV  192 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence            541     222334433   5899999999976

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.7e-28  Score=201.19  Aligned_cols=164  Identities=17%  Similarity=0.136  Sum_probs=129.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .++||++|||||++|||++++++|+++|++|++++|++++++++.+++  .++.++++|++|++++++++      ++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--CCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999999999988877664  46788999999999998754      6899


Q ss_pred             cEEEEcCcCCCcCCC----CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......    +.++.++.+++|+.|+.++.+++    +++.++||++||..+..    +.+....|+.+|.
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~----~~~~~~~Y~asKa  156 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----GQAQAVPYVATKG  156 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----CCTTCHHHHHHHH
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc----cccCcchhHHHHh
Confidence            999999997643221    11223445689999999988866    34458999999998873    3334456765554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++..+||++++|+||+|-
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~  185 (250)
T d1ydea1         157 AVTAMTKALALDESPYGVRVNCISPGNIW  185 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             hHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence                 344456677899999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.95  E-value=4e-28  Score=201.81  Aligned_cols=166  Identities=13%  Similarity=0.104  Sum_probs=127.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      .++||++|||||++|||++++++|+++|++|++++|++++++++.+++. ..++.++++|++|++++++++      +++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999999999999999998887766543 457889999999999988754      689


Q ss_pred             CcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCC-CeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSL-KRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~-~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +|+||||||.......   +.++..+.+++|+.|+.++.+++     +.+. ++||++||..+..    +.+....|+.+
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----~~~~~~~Y~as  158 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----GDPSLGAYNAS  158 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----cCCCchhHHHH
Confidence            9999999998753211   11112345689999999988865     2343 4899999998873    33445677766


Q ss_pred             HHH-----HH--HHHHHHhcCCCEEEEecceEE
Q 025619          223 KYK-----KM--GEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~k-----~~--~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |..     +.  .|..+.++||+|++|.||++.
T Consensus       159 Kaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~  191 (251)
T d1zk4a1         159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK  191 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC
T ss_pred             HHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence            642     12  122356789999999999874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.95  E-value=4.2e-28  Score=202.59  Aligned_cols=166  Identities=14%  Similarity=0.139  Sum_probs=129.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.+++.  ..++.++++|++|++++++++      ++
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999998887765543  456788999999999888654      45


Q ss_pred             -CCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 -GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 -~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                       ++|++|||||......   .+.++.+..+++|+.|+.++.+++     +.+.++||++||..+..    +.+....|+.
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~a  160 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----AVPYEAVYGA  160 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----ccccccchHH
Confidence             6999999999865322   112223446689999999888865     34668999999998873    3334456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||+|++|.||+|-
T Consensus       161 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  192 (259)
T d2ae2a_         161 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA  192 (259)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhCcCceEEEEeeeCccc
Confidence            553     344456677889999999999873

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=5.5e-28  Score=200.61  Aligned_cols=162  Identities=15%  Similarity=0.035  Sum_probs=125.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .++||++|||||++|||++++++|+++|++|++++|+++..+.. +.   .+..++++|++|++++++++      ++++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-EA---IGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-HH---HTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HH---cCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999999998765433 22   24567899999999988754      6899


Q ss_pred             cEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH
Q 025619          153 THVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~  224 (250)
                      |+||||||.......   +.++.++.+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.+|.
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~asKa  153 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----AEQENAAYNASKG  153 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----BCTTBHHHHHHHH
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----cccccchhHHHHH
Confidence            999999998653211   11122345689999999988876     34668999999999873    3445566766554


Q ss_pred             -----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                           .+.+..++.++||+|++|.||++-
T Consensus       154 al~~ltk~lA~el~~~gIrVN~I~PG~v~  182 (248)
T d2d1ya1         154 GLVNLTRSLALDLAPLRIRVNAVAPGAIA  182 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence                 334456677889999999999873

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.94  E-value=2.9e-28  Score=203.72  Aligned_cols=165  Identities=11%  Similarity=0.035  Sum_probs=126.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.   +.++.++++|++|++++++++      +
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999997 455555443321   457888999999999998754      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +++|+||||||......   .+.++....+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~a  157 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV----ASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee----ccCCcchhhh
Confidence            89999999999875322   111223456689999999888865     34668999999999874    3344456765


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||++++|+||++-
T Consensus       158 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  189 (260)
T d1x1ta1         158 AKHGVVGFTKVTALETAGQGITANAICPGWVR  189 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             hhhhHHHhHHHHHHHhchhCcEEEEEecCCCC
Confidence            554     334446667789999999999873

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.5e-27  Score=187.51  Aligned_cols=155  Identities=21%  Similarity=0.240  Sum_probs=127.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |.+|+|+||||||+||++++++|+++|++|++++|++++++...    ..+++++.+|++|.+++.++ +.++|+|||++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~gD~~d~~~l~~a-l~~~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADVDKT-VAGQDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS----CCCSEEEESCTTSHHHHHHH-HTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc----ccccccccccccchhhHHHH-hcCCCEEEEEe
Confidence            46789999999999999999999999999999999998865432    45789999999999999876 78999999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCC
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP  238 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~  238 (250)
                      |...        .....+++..++.+++++++ .+++|+|++||..++............  +...+...|+++++.|++
T Consensus        76 g~~~--------~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~--~~~~~~~~e~~l~~~~~~  145 (205)
T d1hdoa_          76 GTRN--------DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQA--VTDDHIRMHKVLRESGLK  145 (205)
T ss_dssp             CCTT--------CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHH--HHHHHHHHHHHHHHTCSE
T ss_pred             ccCC--------chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccc--cchHHHHHHHHHHhcCCc
Confidence            8642        12233788999999999985 689999999998887654332222233  346678889999999999


Q ss_pred             EEEEecceEEe
Q 025619          239 FTIISLCIYCI  249 (250)
Q Consensus       239 ~~~vrPg~v~~  249 (250)
                      +++||||+++.
T Consensus       146 ~tiirp~~~~~  156 (205)
T d1hdoa_         146 YVAVMPPHIGD  156 (205)
T ss_dssp             EEEECCSEEEC
T ss_pred             eEEEecceecC
Confidence            99999999863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.94  E-value=9.2e-28  Score=200.63  Aligned_cols=166  Identities=16%  Similarity=0.106  Sum_probs=130.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .++||++|||||++|||++++++|+++|++|++++|++++++++.+++.  +.++..+++|++|++++++++      ++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999999998887665443  457888999999999988754      68


Q ss_pred             CCcEEEEcCcCCCcCC----CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      ++|++|||||......    .+.++....+++|+.++.++.+++     +++.++||++||..+..    +.+....|+.
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----~~~~~~~Y~a  157 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK----GPPNMAAYGT  157 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS----CCTTBHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc----CCcchHHHHH
Confidence            9999999999764211    122223445688999999988865     34678999999998873    3344556766


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++..+||++++|.||+|-
T Consensus       158 sKaal~~ltk~lA~el~~~gIrVN~I~PG~v~  189 (260)
T d1zema1         158 SKGAIIALTETAALDLAPYNIRVNAISPGYMG  189 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEeccCccc
Confidence            554     334456677889999999999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.94  E-value=3.8e-28  Score=202.61  Aligned_cols=164  Identities=15%  Similarity=0.131  Sum_probs=127.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .||++|||||++|||++++++|+++|++|++++|++++++++.+++.  ..++..+++|++|++++++++      ++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            37899999999999999999999999999999999998887765443  457888999999999998754      6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-c------CCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-P------SSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-~------~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      |+||||||......   .+.++.++.+++|+.|+.++.+++ +      ++.++||++||..+..    +.+....|+.+
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~----~~~~~~~Y~as  156 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----GVVHAAPYSAS  156 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc----ccccchhHHHH
Confidence            99999999865322   112223456689999999999865 2      3557999999998873    33444567655


Q ss_pred             HH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++.++||+|++|+||+|-
T Consensus       157 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~  187 (257)
T d2rhca1         157 KHGVVGFTKALGLELARTGITVNAVCPGFVE  187 (257)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence            54     334446667789999999999873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.94  E-value=1.7e-27  Score=199.83  Aligned_cols=167  Identities=12%  Similarity=0.171  Sum_probs=128.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|++++++++.+++. ...+.++++|++|++++++++      +++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999999999999888776654 346778999999999998754      689


Q ss_pred             CcEEEEcCcCCCcCCC-CC----CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          152 VTHVICCTGTTAFPSR-RW----DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~-~~----~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +|++|||||....... .+    +..+..+++|+.|+..+.+++     +++.+++|++||..+.....   .....|+.
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---~~~~~Y~a  159 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---GVSHVYTA  159 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---TSCHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc---ccccccch
Confidence            9999999998653211 11    122345588999998888865     35678999999988774211   11235555


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.++||+|++|.||++-
T Consensus       160 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  191 (268)
T d2bgka1         160 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVA  191 (268)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCS
T ss_pred             hHHHHHhCHHHHHHHhChhCeEEEecCCCCcc
Confidence            443     334446677889999999999873

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=7.2e-28  Score=201.14  Aligned_cols=166  Identities=14%  Similarity=0.126  Sum_probs=121.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F-  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~-  149 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|++++++++.+++.  ..++..+.+|++|++++++.+      + 
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            6799999999999999999999999999999999999998887765432  457889999999999887644      4 


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +.+|++|||||......   .+.++.+..+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.
T Consensus        85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----~~~~~~~Y~a  160 (259)
T d1xq1a_          85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV----SASVGSIYSA  160 (259)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------CCHHHH
T ss_pred             CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc----cccccccccc
Confidence            57999999999865321   111223445688999999988865     34678999999988873    2333456665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++..+||+|++|.||++-
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~  192 (259)
T d1xq1a_         161 TKGALNQLARNLACEWASDGIRANAVAPAVIA  192 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC
T ss_pred             cccchhhhhHHHHHHhcccCeEEEEeccCccc
Confidence            554     344456677889999999999873

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.94  E-value=1.2e-27  Score=199.07  Aligned_cols=165  Identities=18%  Similarity=0.107  Sum_probs=128.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .+++|++|||||++|||++++++|+++|++|++++|++++++++.+++ ..+..++++|++|++++++.+      ++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999999999988877665 456778999999999888654      6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      |+||||||......   .+.++.++.+++|+.|+..+++++    ++..++||++||..+..    +.+....|+.+|. 
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~----~~~~~~~Y~asKaa  157 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----PIEQYAGYSASKAA  157 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----CCTTBHHHHHHHHH
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc----CccccccccchhHH
Confidence            99999999865321   111223446688999988888765    44458999999998873    3444566776654 


Q ss_pred             ----HHHHHHHHHh--cCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQK--SGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~--~gi~~~~vrPg~v~  248 (250)
                          .+.+..++..  ++|++++|.||++.
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~  187 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIY  187 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEEC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCc
Confidence                2233344544  46999999999984

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=8.7e-28  Score=198.09  Aligned_cols=158  Identities=16%  Similarity=0.146  Sum_probs=119.8

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCC
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..+         ++..+++|++|++++++++      +++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------GLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc---------CceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999999999876543         4567899999999988654      679


Q ss_pred             CcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +|++|||||......   .+.++.++.+++|+.++..+.+++     +++.++||++||..+..    +.+....|+.+|
T Consensus        74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asK  149 (237)
T d1uzma1          74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----GIGNQANYAASK  149 (237)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------CCHHHHHHH
T ss_pred             ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc----CCcccHHHHHHH
Confidence            999999999865321   111222445689999998888755     35667999999998873    333445666555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++..+||+|++|+||++.
T Consensus       150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~  179 (237)
T d1uzma1         150 AGVIGMARSIARELSKANVTANVVAPGYID  179 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHhhhhcCCceeeeeeeCcCC
Confidence            4     333446677789999999999874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.94  E-value=1.3e-27  Score=199.83  Aligned_cols=166  Identities=17%  Similarity=0.164  Sum_probs=125.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++||+++||||++|||++++++|+++|++|++++|+.+ .++++.+++.  ..++..+++|++|++++++++      +
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999854 4555444332  456788999999999988754      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCC-CCeEEEEccCcccccCCCCcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~-~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      +++|++|||||......   .+.++..+.+++|+.|+.++.+++     +++ .++||++||.++..    +.+....|+
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~----~~~~~~~Y~  159 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----PWPLFVHYA  159 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----CCTTCHHHH
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc----cCccccccc
Confidence            79999999999865321   111222445688999988888765     233 45699999998873    344456676


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++..+||++++|.||++.
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~  192 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN  192 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCc
Confidence            5554     344556677889999999999874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.94  E-value=1.5e-27  Score=198.83  Aligned_cols=162  Identities=13%  Similarity=0.125  Sum_probs=125.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D~  154 (250)
                      |++|||||++|||++++++|+++|++|++++|++++++++.+++.  ..++..+++|++|++++++++      ++++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            567999999999999999999999999999999998887765443  457888999999999988754      689999


Q ss_pred             EEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cC-CCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       155 vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~-~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      ||||||......   .+.++.++.+++|+.|+.++++++     +. ..++||++||.++..    +.+....|+.+|. 
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~asKaa  157 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----GNPELAVYSSSKFA  157 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCTTBHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----cCcccccchhCHHH
Confidence            999999865322   112223446689999999988865     22 356899999988873    3444566765554 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+.+..++.++||++++|.||++-
T Consensus       158 l~~ltk~lA~el~~~gIrVN~I~PG~i~  185 (255)
T d1gega_         158 VRGLTQTAARDLAPLGITVNGYCPGIVK  185 (255)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             HHhhHHHHHHHhhhhCcEEEEEecCccc
Confidence                334456677889999999999873

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.94  E-value=1.4e-27  Score=197.27  Aligned_cols=161  Identities=14%  Similarity=0.186  Sum_probs=126.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCe-------EEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~-------V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      +||||||++|||++++++|+++|++       |++++|++++++++.+++.  +.++..+++|++|++++++++      
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            6899999999999999999999997       8999999998887765443  456788999999999988754      


Q ss_pred             hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||......   .+.++.++.+++|+.|+.++.+++     +++.++||++||.++..    +.+....|+
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----~~~~~~~Y~  158 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----AFRHSSIYC  158 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTCHHHH
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC----CCCCChHHH
Confidence            689999999999875322   112223446689999999988876     34668999999998873    344456777


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..+++++||++++|+||++-
T Consensus       159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~  191 (240)
T d2bd0a1         159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVY  191 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCccc
Confidence            6664     344556777899999999999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-26  Score=193.43  Aligned_cols=158  Identities=15%  Similarity=0.155  Sum_probs=123.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhh------hC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------FE  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~------~~  150 (250)
                      .||++|||||++|||++++++|+++|++|++++|+.+++++..+++    ...++.++++|++|++++++++      ++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999998877655433    2346788999999999988754      68


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc----c-C--C-CCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----P-S--S-LKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~----~-~--~-~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      ++|+||||||....  .   +.++.+++|+.++.++.+++    + .  + .++||++||.++..    +.+....|+.+
T Consensus        82 ~iDilVnnAg~~~~--~---~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~----~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNNE--K---NWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----PVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCCS--S---SHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTCHHHHHH
T ss_pred             CcCeeccccccccc--c---cchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc----CCCCccchHHH
Confidence            99999999998642  2   33456689999877776654    2 2  2 36899999999873    44455677766


Q ss_pred             HH-----HH--HHHHHHHhcCCCEEEEecceE
Q 025619          223 KY-----KK--MGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       223 k~-----k~--~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      |+     .+  .++.++..+||++++|+||+|
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i  184 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFV  184 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCB
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCC
Confidence            64     11  245567789999999999987

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=5.5e-27  Score=197.28  Aligned_cols=165  Identities=13%  Similarity=0.141  Sum_probs=125.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhh------
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++||+++||||++|||++++++|+++|++|++++|++++++++.+++.     ..++..+.+|++|++++++++      
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998877655432     236789999999999988754      


Q ss_pred             hCCCcEEEEcCcCCCcCCC-CC----CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAFPSR-RW----DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~-~~----~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|++|||||....... ..    +..+..+++|+.|+..+.+++     +.+.++|+++||.++..    +.+....
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~----~~~~~~~  157 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ----AHSGYPY  157 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS----CCTTSHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc----cCCCCce
Confidence            6899999999997543221 11    122345688999999888866     24556788888776653    2334456


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++..+||+|++|.||++-
T Consensus       158 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  192 (274)
T d1xhla_         158 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA  192 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             ehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCc
Confidence            665554     344456677889999999999974

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.93  E-value=2.2e-26  Score=193.72  Aligned_cols=164  Identities=17%  Similarity=0.145  Sum_probs=124.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.++. ..++..+.+|++|++++++++      ++++
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            578999999999999999999999999999999999999888776554 356888999999999888754      6899


Q ss_pred             cEEEEcCcCCCcCCCCCCC--------CCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          153 THVICCTGTTAFPSRRWDG--------DNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~--------~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      |++|||||........+..        .++.+++|+.|+.++.+++    ++..+++|+++|..+..    +.+....|+
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~----~~~~~~~Y~  156 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY----PNGGGPLYT  156 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS----TTSSCHHHH
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc----CCCCCchHH
Confidence            9999999986532211111        1244688999988888765    33347899999987763    333445676


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|.     .+.+..++.+ +|+|++|+||+|-
T Consensus       157 asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~  188 (276)
T d1bdba_         157 AAKHAIVGLVRELAFELAP-YVRVNGVGSGGIN  188 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEe
Confidence            5554     2333445554 5999999999873

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.93  E-value=2e-26  Score=193.61  Aligned_cols=166  Identities=17%  Similarity=0.161  Sum_probs=123.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|++|||||++|||++++++|+++|++|++++|++++++++.+++.     ..++..+++|++|++++++++     
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999998887655432     235788999999999988654     


Q ss_pred             -hCCCcEEEEcCcCCCcCCC---CCCC----CCCcceehHHHHHHHHHHc----cCCCCeEEEEccC-cccccCCCCcch
Q 025619          149 -FEGVTHVICCTGTTAFPSR---RWDG----DNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSV-GVTKFNELPWSI  215 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~~---~~~~----~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~-~~~~~~~~~~~~  215 (250)
                       ++++|++|||||.......   .++.    ....+++|+.|+.++.+++    +++.+++|+++|. ++..    +.+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~----~~~~  157 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ----AQPD  157 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS----CCCS
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc----CCCC
Confidence             6899999999998653211   1111    2234478999999988876    3344566666664 4442    3334


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ...|+.+|.     .+.+..++.++||+|++|.||+|-
T Consensus       158 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~  195 (272)
T d1xkqa_         158 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE  195 (272)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred             cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence            456665554     344556777899999999999873

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.1e-26  Score=191.94  Aligned_cols=167  Identities=20%  Similarity=0.213  Sum_probs=125.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~------  148 (250)
                      ++++|++|||||++|||+++|+.|+++|++|++++|++++++++.+++.    ..++..+++|++|++++++++      
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999998888765442    246788999999999988754      


Q ss_pred             hCCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cC--CCCeEEEEccCcccccCCCCcchhhH
Q 025619          149 FEGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PS--SLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~--~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++|+||||||.......   +.+..+..+++|+.|+.++.+++     +.  ..++||++||.++...  .|......
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~--~p~~~~~~  164 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV--LPLSVTHF  164 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--CSCGGGHH
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC--CCCcccHH
Confidence            7899999999998753211   11122335588999988877754     22  3579999999887632  23344456


Q ss_pred             HHHHHH-----HHHHHHHH--HhcCCCEEEEecceE
Q 025619          219 FGVLKY-----KKMGEDFV--QKSGLPFTIISLCIY  247 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~--~~~gi~~~~vrPg~v  247 (250)
                      |+.+|+     .+.+..++  ...||++++|.||.+
T Consensus       165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i  200 (257)
T d1xg5a_         165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVV  200 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred             HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC
Confidence            765554     22333444  457999999999976

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.93  E-value=3.2e-27  Score=195.48  Aligned_cols=162  Identities=16%  Similarity=0.128  Sum_probs=123.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEe-cChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~-R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~~D  153 (250)
                      ++||||||++|||++++++|+++|++|++.+ |+++.++++.+++.  +.++.++++|++|++++++++      ++++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999998874 56666666654432  457788999999999988654      67999


Q ss_pred             EEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-
Q 025619          154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-  224 (250)
Q Consensus       154 ~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-  224 (250)
                      ++|||||......   .+.++.++.+++|+.|+.++.+++     +++.++||++||..+..    +.+....|+.+|. 
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----~~~~~~~Y~asKaa  157 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----GNIGQANYAAAKAG  157 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----CCTTCHHHHHHHHH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----CCCCCHHHHHHHHH
Confidence            9999999875322   122223456689999999988865     34678999999998873    3334456665554 


Q ss_pred             ----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                          .+.+..++.++||++++|+||++-
T Consensus       158 l~~ltk~lA~el~~~gIrvN~I~PG~i~  185 (244)
T d1edoa_         158 VIGFSKTAAREGASRNINVNVVCPGFIA  185 (244)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             HHHChHHHHHHHhhhCcEEEEEecceec
Confidence                344556677889999999999873

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.93  E-value=1.8e-26  Score=192.08  Aligned_cols=161  Identities=17%  Similarity=0.160  Sum_probs=123.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh---CcCCCCCeeEEEeeCC-CccCcchhh------
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF---GKQDEETLQVCKGDTR-NPKDLDPAI------  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~---~~~~~~~~~~v~~Dl~-d~~~~~~~~------  148 (250)
                      ++++|+||||||++|||+++|++|+++|++|++++|+.++.+++.   ......++.++.+|++ |.+++++++      
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999988776544432   2233457888999998 545566543      


Q ss_pred             hCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cC---CCCeEEEEccCcccccCCCCcchhhHHH
Q 025619          149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PS---SLKRIVLVSSVGVTKFNELPWSIMNLFG  220 (250)
Q Consensus       149 ~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~---~~~~iV~iSS~~~~~~~~~~~~~~~~y~  220 (250)
                      ++++|+||||||...     .+..+..+++|+.|+.++.+++     ++   ..++||++||..++.    +.+....|+
T Consensus        82 ~g~iDilvnnAG~~~-----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~----~~~~~~~Y~  152 (254)
T d1sbya1          82 LKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN----AIHQVPVYS  152 (254)
T ss_dssp             HSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----CCTTSHHHH
T ss_pred             cCCCCEEEeCCCCCC-----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc----CCCCCHHHH
Confidence            689999999999753     2234556799999998888865     21   347899999999873    344455676


Q ss_pred             HHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          221 VLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       221 ~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+|+     .+.+..++..+||++++|+||+|.
T Consensus       153 asKaal~~~t~~la~el~~~gIrVn~I~PG~v~  185 (254)
T d1sbya1         153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITR  185 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHhhccccCeEEEEEEeCCCc
Confidence            6554     334456677889999999999985

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=9.4e-27  Score=194.84  Aligned_cols=167  Identities=15%  Similarity=0.168  Sum_probs=121.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhh-----
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI-----  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~-----  148 (250)
                      .+++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.     ..++..+++|++|++++++++     
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999998887655432     245889999999999988754     


Q ss_pred             -hCCCcEEEEcCcCCCcCC---C----CCCCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 -FEGVTHVICCTGTTAFPS---R----RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 -~~~~D~vi~~Ag~~~~~~---~----~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                       ++++|++|||||......   .    +.++.+..+++|+.|+.++.+++    +++.+++|+++|.....   .+.+..
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~---~~~~~~  158 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL---HATPDF  158 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS---SCCTTS
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc---ccCCCc
Confidence             689999999999864211   1    11122345688999998888866    33446777777655421   223334


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|.     .+.+..++..+||++++|+||+|-
T Consensus       159 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~  195 (264)
T d1spxa_         159 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA  195 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred             hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            56665554     344456777889999999999873

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.93  E-value=2.2e-26  Score=191.87  Aligned_cols=166  Identities=14%  Similarity=0.132  Sum_probs=128.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F-  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~-  149 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.+++.  ...+.++.+|++|.+++++.+      + 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999988887665443  456778999999999887654      4 


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +.+|+||||||.......   +.++....+++|+.++..+.+++     +++.++||++||..+..    +.+....|+.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~----~~~~~~~Y~~  158 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS----ALPSVSLYSA  158 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----CCTTCHHHHH
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc----ccccchhHHH
Confidence            469999999998653211   11122345588999998888865     34678999999999873    3344556665


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|.     .+.+..++.+.||++++|+||++.
T Consensus       159 sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~  190 (258)
T d1ae1a_         159 SKGAINQMTKSLACEWAKDNIRVNSVAPGVIL  190 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHHHHHHHHhcCcCcEEEEEEeeCccc
Confidence            553     334456667789999999999984

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=5.3e-26  Score=197.77  Aligned_cols=164  Identities=15%  Similarity=0.164  Sum_probs=121.2

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-----hHhhhhCc--CCCCCeeEEEeeCCCccCcchhhhC--CC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFGK--QDEETLQVCKGDTRNPKDLDPAIFE--GV  152 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-----~~~~~~~~--~~~~~~~~v~~Dl~d~~~~~~~~~~--~~  152 (250)
                      .|+||||||||+||++|+++|+++|++|++++|...     +++.+...  ....+++++++|++|.+++++. +.  ++
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~   79 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRI-LREVQP   79 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHH-HHHHCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHH-HhccCC
Confidence            379999999999999999999999999999999643     22222211  1145789999999999999976 44  57


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-C---CCCeEEEEccCccccc-------CCCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S---SLKRIVLVSSVGVTKF-------NELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~---~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~  221 (250)
                      |+|||+|+..+.+ ..+.++...+++|+.||.+++++++ .   +..|||++||..+|+.       ++.+..|.+.|+.
T Consensus        80 d~v~h~aa~~~~~-~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~  158 (357)
T d1db3a_          80 DEVYNLGAMSHVA-VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAV  158 (357)
T ss_dssp             SEEEECCCCCTTT-TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHH
T ss_pred             CEEEEeecccccc-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHH
Confidence            9999999987643 3344555567999999999999884 2   3458999999999863       3334556677775


Q ss_pred             HHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                      +  |.++|..    .+..|++++++||+.+||
T Consensus       159 s--K~~~E~~~~~~~~~~~l~~~ilR~~~vyG  188 (357)
T d1db3a_         159 A--KLYAYWITVNYRESYGMYACNGILFNHES  188 (357)
T ss_dssp             H--HHHHHHHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             H--HHHHHHHHHHHHHHhCCCEEEEEeccccC
Confidence            4  5555544    445799999999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.2e-26  Score=194.57  Aligned_cols=165  Identities=14%  Similarity=0.170  Sum_probs=124.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-------CCCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-------~~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      .++||++|||||++|||++++++|+++|++|++++|+.+++++..+++       ...++..+++|++|++++++++   
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998877654432       1357888999999999988754   


Q ss_pred             ---hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhh
Q 025619          149 ---FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMN  217 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~  217 (250)
                         ++++|+||||||......   ...++.+..+++|+.|+..+.+++     +.+.++||++|+.....     .+...
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-----~~~~~  163 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----FPLAV  163 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----CTTCH
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-----ccccc
Confidence               679999999999765322   111223445688999999988865     24567888887754432     23345


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++..+||+|++|+||+|.
T Consensus       164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~  199 (297)
T d1yxma1         164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIY  199 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCc
Confidence            5655543     334446667789999999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.92  E-value=2.1e-26  Score=192.34  Aligned_cols=170  Identities=16%  Similarity=0.150  Sum_probs=125.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++.   +.++..+++|++|++++++++      +
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999887766543321   457888999999999988754      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc------cCCCCeEEEEccCcccccCC---CCcchhh
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNE---LPWSIMN  217 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~------~~~~~~iV~iSS~~~~~~~~---~~~~~~~  217 (250)
                      +++|++|||||......   .+.++.++.+++|+.|+.++.+++      +.+.++|+.++|........   .+.....
T Consensus        86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~  165 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  165 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence            79999999999865321   111223445688999988888755      23556777777776653211   1112334


Q ss_pred             HHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          218 LFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       218 ~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .|+.+|.     .+.+..++.++||++++|.||++-
T Consensus       166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~  201 (260)
T d1h5qa_         166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVN  201 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCccc
Confidence            5665554     334456677899999999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=4.4e-26  Score=194.15  Aligned_cols=164  Identities=13%  Similarity=0.066  Sum_probs=121.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh---------hHhhhhCcCCCCCeeEEEeeCCCccCcchhh-
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---------KATTLFGKQDEETLQVCKGDTRNPKDLDPAI-  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~---------~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-  148 (250)
                      +++||++|||||++|||++++++|+++|++|++.+|+.+         .++++.+++. .......+|++|.+++++.+ 
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHHHHH
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHHHH
Confidence            689999999999999999999999999999999977543         3333333221 23446789999988877644 


Q ss_pred             -----hCCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcch
Q 025619          149 -----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSI  215 (250)
Q Consensus       149 -----~~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~  215 (250)
                           ++++|+||||||......   .+.++.+..+++|+.|+.++++++     +++.++||++||..+..    +.+.
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~----~~~~  158 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----GNFG  158 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----CCTT
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC----CCCC
Confidence                 689999999999875321   111223446689999999998876     34678999999998873    2334


Q ss_pred             hhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          216 MNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       216 ~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                      ...|+.+|.     .+.+..++.++||++++|.||++
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence            456665554     33445667788999999999976

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.92  E-value=2.6e-25  Score=184.30  Aligned_cols=166  Identities=16%  Similarity=0.038  Sum_probs=121.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHH---HCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh--------h
Q 025619           82 SKLVLVAGGSGGVGQLVVASLL---SRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI--------F  149 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~---~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~--------~  149 (250)
                      ||+||||||++|||+++|++|+   ++|++|++++|++++++++.+... ..++.++++|++|++++++++        +
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            6899999999999999999997   479999999999988776543221 468999999999999988643        3


Q ss_pred             CCCcEEEEcCcCCCcCCCCCC----CCCCcceehHHHHHHHHHHc----c------------CCCCeEEEEccCcccccC
Q 025619          150 EGVTHVICCTGTTAFPSRRWD----GDNTPEKVDWEGVRNLVSAL----P------------SSLKRIVLVSSVGVTKFN  209 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~----~~~~~~~~N~~g~~~l~~a~----~------------~~~~~iV~iSS~~~~~~~  209 (250)
                      +++|+||||||.........+    ..+..+++|+.|+..+++++    +            .+.+++|++||..+....
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            679999999998653221111    12345688999988888765    1            145799999998765322


Q ss_pred             CCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          210 ELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       210 ~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      . +......|+.+|+     .+.+..++++.||++++|+||+|-
T Consensus       162 ~-~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~  204 (248)
T d1snya_         162 N-TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK  204 (248)
T ss_dssp             C-CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred             C-CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence            1 2233445665553     223445667789999999999874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=3.1e-25  Score=182.32  Aligned_cols=156  Identities=17%  Similarity=0.108  Sum_probs=116.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi~  157 (250)
                      +++|++|||||++|||++++++|+++|++|++++|+++.+++.       ..+++.+|+++.  ++..+  ++++|++||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~~--~~~~~~~~g~iD~lVn   72 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRKD--LDLLFEKVKEVDILVL   72 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTTC--HHHHHHHSCCCSEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHHH--HHHHHHHhCCCcEEEe
Confidence            5789999999999999999999999999999999999877653       345788999864  33222  789999999


Q ss_pred             cCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----
Q 025619          158 CTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----  224 (250)
Q Consensus       158 ~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----  224 (250)
                      |||......   .+.++.++.+++|+.++..+.+++     +++.++||+++|.....    +......|+.+|.     
T Consensus        73 nAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~----~~~~~~~Y~asKaal~~l  148 (234)
T d1o5ia_          73 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----PIENLYTSNSARMALTGF  148 (234)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CCTTBHHHHHHHHHHHHH
T ss_pred             cccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc----cccccccchhHHHHHHHH
Confidence            999764321   111122345588999988888865     24668999999988763    3334455555443     


Q ss_pred             HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+.+..++.++||++++|+||++-
T Consensus       149 tk~lA~ela~~gIrVN~I~PG~v~  172 (234)
T d1o5ia_         149 LKTLSFEVAPYGITVNCVAPGWTE  172 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHHHHHhcccCeEEeecccCccc
Confidence            344456677889999999999874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.91  E-value=2e-25  Score=184.24  Aligned_cols=164  Identities=14%  Similarity=0.122  Sum_probs=124.3

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.++++|++|++++++++      ++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            478999999999999999999999999999999999999988877665 457888999999999998754      6899


Q ss_pred             cEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc---cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH--
Q 025619          153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL---PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY--  224 (250)
Q Consensus       153 D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~---~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~--  224 (250)
                      |++|||||......   .+.+...+.+++|+.++..+.+++   ....+.++++||.+..     +.+....|+.+|+  
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----~~~~~~~Y~~sK~al  155 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----GAFGLAHYAAGKLGV  155 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----CHHHHHHHHHCSSHH
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----cccCccccchhhHHH
Confidence            99999999865322   111122345588999999998876   2334566666665543     2334455654442  


Q ss_pred             ---HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 ---KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 ---k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         .+.+.+++..+||++++|.||++-
T Consensus       156 ~~lt~~lA~el~~~gIrvN~I~PG~v~  182 (241)
T d2a4ka1         156 VGLARTLALELARKGVRVNVLLPGLIQ  182 (241)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBC
T ss_pred             HHHHHHHHHHHhHhCCEEeeeccCcCC
Confidence               444556677889999999999873

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.4e-25  Score=186.68  Aligned_cols=166  Identities=15%  Similarity=0.080  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +++||++|||||+|  |||++++++|+++|++|++.+|+++..++..+... ..+...+++|++|++++++++      +
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            68999999999987  99999999999999999999998654443322111 345678999999999988654      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCC----CCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWD----GDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~----~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|++|||||......   ...+    +....+++|+.++..+++++.   ...++||++||..+..    +.+....|
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~----~~~~~~~Y  160 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----VVPKYNVM  160 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----BCTTCHHH
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC----CCCCchHH
Confidence            79999999999754211   1111    112345789999999988762   2237899999988873    33445667


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|.     .+.+..++..+||+|++|.||++.
T Consensus       161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~  194 (256)
T d1ulua_         161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVR  194 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence            65554     334556677889999999999874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.9e-25  Score=180.79  Aligned_cols=164  Identities=13%  Similarity=0.074  Sum_probs=125.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--hCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--~~~~D~vi  156 (250)
                      +++||++|||||++|||++++++|+++|++|++++|++++++++.+.   .++....+|+.+.+.++...  ++++|+||
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY---PGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS---TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc---cCCceeeeeccccccccccccccccceeEE
Confidence            47999999999999999999999999999999999999998887653   46778888988877666433  57899999


Q ss_pred             EcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH----
Q 025619          157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (250)
Q Consensus       157 ~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~----  224 (250)
                      ||||......   .+.+.....+++|+.++..+.+++     +.+.++||++||..+..   .++.....|+.+|.    
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---~~~~~~~~Y~~sKaal~~  156 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---KGVVNRCVYSTTKAAVIG  156 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---BCCTTBHHHHHHHHHHHH
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---CCccchhHHHHHHHHHHH
Confidence            9999876322   111122345588999999998866     34668999999876632   13444566766554    


Q ss_pred             -HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                       .+.+..++..+||++++|.||++-
T Consensus       157 l~r~lA~e~~~~gIrvN~I~PG~i~  181 (245)
T d2ag5a1         157 LTKSVAADFIQQGIRCNCVCPGTVD  181 (245)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESCEE
T ss_pred             HHHHHHHHhhhhCcEEEEEeeceee
Confidence             334456677889999999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.91  E-value=9.7e-25  Score=185.01  Aligned_cols=170  Identities=12%  Similarity=0.076  Sum_probs=123.0

Q ss_pred             CCCCCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhh---
Q 025619           75 KVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        75 ~~~~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      |+..+++||++|||||+||||+++|++|+++|++|++++|+.+++++..+++.   +..+..+++|++|.+++++.+   
T Consensus        18 ~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          18 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh
Confidence            44457999999999999999999999999999999999999988776554332   456788999999999987644   


Q ss_pred             ---hCCCcEEEEcCcCCCcCCCCCC---CCCCcceehHHHHHHHHHHc------cCCCCeEEEEccCcccccCCCCcchh
Q 025619          149 ---FEGVTHVICCTGTTAFPSRRWD---GDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 ---~~~~D~vi~~Ag~~~~~~~~~~---~~~~~~~~N~~g~~~l~~a~------~~~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                         ++++|++|||||..........   +....+.+|..+...+....      ....+.++.++|..+...    .+..
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~----~~~~  173 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----SGFV  173 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----CTTC
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----cccc
Confidence               6789999999998753221111   11223466777766665543      234567888888776632    2233


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+.+|+     .+.+..++..+||+|++|+||++.
T Consensus       174 ~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  210 (294)
T d1w6ua_         174 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIK  210 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccc
Confidence            45655543     334456667789999999999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.91  E-value=1.8e-24  Score=181.46  Aligned_cols=167  Identities=13%  Similarity=0.096  Sum_probs=122.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh-hhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~-~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      +|+||++|||||++|||++++++|+++|++|++++|+. +.++++.+++.  ..++.++++|++|++++++.+      +
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999998874 44555443322  457888999999999988754      6


Q ss_pred             CCCcEEEEcCcCCCcCC---CCCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|++|||||......   ...+...+.+++|+.++..+.+++.   ...+++++++|..+..   .+......|+.+|
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~---~~~~~~~~Y~asK  171 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA---KAVPKHAVYSGSK  171 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC---SSCSSCHHHHHHH
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc---ccccchhhHHHHH
Confidence            89999999999865322   1111223455889999999888762   2346888888776542   1223344565554


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +     .+.+..++..+||+|++|+||++-
T Consensus       172 aal~~ltk~lA~e~~~~gIrVN~I~PG~v~  201 (272)
T d1g0oa_         172 GAIETFARCMAIDMADKKITVNVVAPGGIK  201 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             HHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence            3     334456667789999999999873

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.6e-25  Score=185.41  Aligned_cols=125  Identities=18%  Similarity=0.220  Sum_probs=97.7

Q ss_pred             CCE-EEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------hCC
Q 025619           82 SKL-VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG  151 (250)
Q Consensus        82 ~k~-vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~~~  151 (250)
                      ||+ +|||||++|||+++|++|+++ |++|++++|++++++++.+++.  ..++.++++|++|.+++++++      +++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            444 599999999999999999986 8999999999999887765543  457889999999999988654      679


Q ss_pred             CcEEEEcCcCCCcCCCCCC---CCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCccc
Q 025619          152 VTHVICCTGTTAFPSRRWD---GDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVT  206 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~---~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~  206 (250)
                      +|+||||||+.........   +.+..+++|+.|+.++++++.   +..++||++||..+.
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~  142 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  142 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee
Confidence            9999999998753221111   112356889999999998762   223799999997664

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=7.9e-24  Score=175.44  Aligned_cols=167  Identities=18%  Similarity=0.087  Sum_probs=121.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hC--
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE--  150 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~--  150 (250)
                      +.|+||||||++|||++++++|+++|+  +|++.+|+.++++++.+.. ..+++++++|++|.+++++++      ++  
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            458999999999999999999999996  6888999999888876543 467899999999999988654      33  


Q ss_pred             CCcEEEEcCcCCCcCCCCCC----CCCCcceehHHHHHHHHHHc----cC------------CCCeEEEEccCcccccCC
Q 025619          151 GVTHVICCTGTTAFPSRRWD----GDNTPEKVDWEGVRNLVSAL----PS------------SLKRIVLVSSVGVTKFNE  210 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~----~~~~~~~~N~~g~~~l~~a~----~~------------~~~~iV~iSS~~~~~~~~  210 (250)
                      ++|+||||||.........+    ..++.+++|+.|+.++.+++    ++            ..++++++|+........
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            49999999998642111111    12345689999999988875    11            125788888876654221


Q ss_pred             ---CCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          211 ---LPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       211 ---~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         .+..+...|+.+|.     .+.+..++++.||++++|+||+|-
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~  206 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence               22233345665553     233445667889999999999973

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=4.2e-25  Score=184.21  Aligned_cols=167  Identities=14%  Similarity=0.112  Sum_probs=120.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec-ChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R-~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      ++.||++|||||++|||++++++|+++|++|++++| +.+.++++.+++.  +.++..+++|++|++++++.+      +
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            489999999999999999999999999999998755 5555555544432  457889999999999988654      6


Q ss_pred             CCCcEEEEcCcCCCcCCC---CCCCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLK  223 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k  223 (250)
                      +++|++|||||.......   ..+..+..+++|+.++.++++++.   ...+++++++|..+..   .+.+....|+.+|
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~---~~~~~~~~Y~asK  159 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM---TGIPNHALYAGSK  159 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC---CSCCSCHHHHHHH
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc---cCCCCchhHHHHH
Confidence            789999999998653221   111223456889999888888661   2235677776655432   2333445666555


Q ss_pred             H-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          224 Y-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       224 ~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .     .+.+..++...||++++|+||++-
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~  189 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVK  189 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence            3     334456677889999999999873

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=5.2e-25  Score=183.55  Aligned_cols=164  Identities=13%  Similarity=0.069  Sum_probs=122.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHH---CCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhh---
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI---  148 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~---  148 (250)
                      .|+||+++||||++|||++++++|++   +|++|++++|++++++++.+++.    ..++..+++|++|++++++++   
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999986   79999999999998888765432    346788999999999887653   


Q ss_pred             -------hCCCcEEEEcCcCCCcCC------CCCCCCCCcceehHHHHHHHHHHc----c-CC--CCeEEEEccCccccc
Q 025619          149 -------FEGVTHVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL----P-SS--LKRIVLVSSVGVTKF  208 (250)
Q Consensus       149 -------~~~~D~vi~~Ag~~~~~~------~~~~~~~~~~~~N~~g~~~l~~a~----~-~~--~~~iV~iSS~~~~~~  208 (250)
                             ...+|++|||||......      .+++..+..+++|+.|+.++.+++    + .+  .++||++||..+.. 
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~-  161 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC-
Confidence                   235789999999754211      111122345689999999988866    2 22  36899999998873 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHH-----HhcCCCEEEEecceEE
Q 025619          209 NELPWSIMNLFGVLKYKKMGEDFV-----QKSGLPFTIISLCIYC  248 (250)
Q Consensus       209 ~~~~~~~~~~y~~~k~k~~~e~~~-----~~~gi~~~~vrPg~v~  248 (250)
                         +.+....|+.+|.  .++.+.     +..||++++|+||++.
T Consensus       162 ---~~~~~~~Y~asKa--al~~lt~~la~e~~gIrVn~v~PG~i~  201 (259)
T d1oaaa_         162 ---PYKGWGLYCAGKA--ARDMLYQVLAAEEPSVRVLSYAPGPLD  201 (259)
T ss_dssp             ---CCTTCHHHHHHHH--HHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred             ---CCccchHHHHHHH--HHHHHHHHHHhCCCCCEEEEEEcCCCC
Confidence               4444566765554  332211     2579999999999874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.1e-25  Score=184.90  Aligned_cols=163  Identities=19%  Similarity=0.211  Sum_probs=119.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEE---EecChhhHhh---hhCcC--CCCCeeEEEeeCCCccCcchhh----h
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEKATT---LFGKQ--DEETLQVCKGDTRNPKDLDPAI----F  149 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~---~~R~~~~~~~---~~~~~--~~~~~~~v~~Dl~d~~~~~~~~----~  149 (250)
                      .|+||||||++|||+++|++|+++|++|+.   ..|+.+..+.   ..+++  ...++..+.+|++|.+++++++    .
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            367899999999999999999999987544   4555543332   22222  2457889999999999988654    4


Q ss_pred             CCCcEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGV  221 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~  221 (250)
                      +.+|+||||||.........   +.....+++|+.|+.++.+++     +++.++||++||.++..    +.+....|+.
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~----~~~~~~~Y~a  157 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM----GLPFNDVYCA  157 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----CCTTCHHHHH
T ss_pred             cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC----CCCCchHHHH
Confidence            67999999999876432211   122345689999999988865     35678999999998873    4444566776


Q ss_pred             HHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          222 LKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       222 ~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +|+     .+.+..++..+||++++|+||+|-
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~  189 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVH  189 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence            654     334456677899999999999873

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.90  E-value=9.5e-25  Score=181.32  Aligned_cols=157  Identities=10%  Similarity=-0.021  Sum_probs=118.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCCcEEEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVIC  157 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~D~vi~  157 (250)
                      ++|||||++|||+++|++|+++|++|++.+|+.++++++.+.    ...+..+|++|.+++++++      ++++|++||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            789999999999999999999999999999998877765432    1223468999999887654      689999999


Q ss_pred             cCcCCCcCC--C--CCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCcccccCCCCcchhhHHHHHHH----
Q 025619          158 CTGTTAFPS--R--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY----  224 (250)
Q Consensus       158 ~Ag~~~~~~--~--~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~----  224 (250)
                      |||......  .  ..++.+..+++|+.++.++++++     +++.++||++||..+..    +.+....|+.+|.    
T Consensus        78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~----~~~~~~~Y~asKaal~~  153 (252)
T d1zmta1          78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----PWKELSTYTSARAGACT  153 (252)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----CCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc----ccccccccccccccHHH
Confidence            999753211  1  11122345578999998888865     34668999999998874    3344456766654    


Q ss_pred             -HHHHHHHHHhcCCCEEEEecceEE
Q 025619          225 -KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       225 -k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                       .+.+..++.++||+|++|+||++-
T Consensus       154 lt~~lA~ela~~gIrVN~I~PG~i~  178 (252)
T d1zmta1         154 LANALSKELGEYNIPVFAIGPNYLH  178 (252)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBC
T ss_pred             HHHHHHHHhcccCcEEEEEecCCCc
Confidence             344556777899999999999874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-24  Score=187.16  Aligned_cols=163  Identities=19%  Similarity=0.187  Sum_probs=120.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh----hHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~----~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~  157 (250)
                      |+||||||+|+||++++++|+++|++|++++|-..    ..... +.....+++++++|++|.+.+.+++- .++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            46999999999999999999999999999986321    11111 11124578999999999999987532 27999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC--------CCcchhhHHHHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE--------LPWSIMNLFGVLKYKKMG  228 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~--------~~~~~~~~y~~~k~k~~~  228 (250)
                      +|+....+. ...++...+++|+.|+.+++++++ .+++++|++||..+++...        ....+...|+.  +|...
T Consensus        80 lAa~~~~~~-~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~--sK~~~  156 (338)
T d1udca_          80 FAGLKAVGE-SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGK--SKLMV  156 (338)
T ss_dssp             CCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHH--HHHHH
T ss_pred             CCCccchhh-HHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHH--HHhhh
Confidence            999754221 112334567999999999999995 6889999999999986321        12234566664  55555


Q ss_pred             HHHHH-----hcCCCEEEEecceEEe
Q 025619          229 EDFVQ-----KSGLPFTIISLCIYCI  249 (250)
Q Consensus       229 e~~~~-----~~gi~~~~vrPg~v~~  249 (250)
                      |..+.     ..+++++++||+.+||
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v~G  182 (338)
T d1udca_         157 EQILTDLQKAQPDWSIALLRYFNPVG  182 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEEEC
T ss_pred             hHHHHHHHhhccCCeEEEEeeccEEe
Confidence            54443     3589999999999997

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.5e-24  Score=174.92  Aligned_cols=153  Identities=23%  Similarity=0.265  Sum_probs=122.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      |++|+||||||||+||++++++|+++|.  +|++++|++.+.....    ...+....+|+.+.+++.++ +.++|++||
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~~~-~~~~d~vi~   86 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASA-FQGHDVGFC   86 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGG-GSSCSEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeeccccccccccc-ccccccccc
Confidence            4668999999999999999999999995  7999999875433221    24677788999998888865 789999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcC
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      ++|.....    .......++|+.++.++++++ +.++++||++||..++....      ..  |.++|..+|+.+++.+
T Consensus        87 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~------~~--Y~~~K~~~E~~l~~~~  154 (232)
T d2bkaa1          87 CLGTTRGK----AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN------FL--YLQVKGEVEAKVEELK  154 (232)
T ss_dssp             CCCCCHHH----HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS------SH--HHHHHHHHHHHHHTTC
T ss_pred             cccccccc----cchhhhhhhcccccceeeecccccCccccccCCccccccCcc------ch--hHHHHHHhhhcccccc
Confidence            99865311    122335588999999999988 46899999999998874332      23  4578888999999999


Q ss_pred             CC-EEEEecceEEe
Q 025619          237 LP-FTIISLCIYCI  249 (250)
Q Consensus       237 i~-~~~vrPg~v~~  249 (250)
                      .+ ++++|||.+||
T Consensus       155 ~~~~~IlRP~~i~G  168 (232)
T d2bkaa1         155 FDRYSVFRPGVLLC  168 (232)
T ss_dssp             CSEEEEEECCEEEC
T ss_pred             ccceEEecCceeec
Confidence            86 89999999997

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.9e-24  Score=177.65  Aligned_cols=166  Identities=16%  Similarity=0.146  Sum_probs=123.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.++.   ....+..+.+|+++.+.+....      +
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            379999999999999999999999999999999999999988875432   2456778889999887766432      5


Q ss_pred             CCCcEEEEcCcCCCcCCCCC---CCCCCcceehHHHHHHHHHHc----cCCCCeEEEEccCcccccCCCCcchhhHHHHH
Q 025619          150 EGVTHVICCTGTTAFPSRRW---DGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFNELPWSIMNLFGVL  222 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~---~~~~~~~~~N~~g~~~l~~a~----~~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~  222 (250)
                      +.+|+++||||.........   +.....+++|+.|+..+.+++    +++.+++|++||.++.    .+.+....|+.+
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~----~~~p~~~~Y~as  166 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK----VAYPMVAAYSAS  166 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT----SCCTTCHHHHHH
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc----CCCCCchHHHHH
Confidence            78999999999865322111   112335588999988887765    4456899999999887    344555677755


Q ss_pred             HH-----HHHHHHHHH--hcCCCEEEEecceEE
Q 025619          223 KY-----KKMGEDFVQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       223 k~-----k~~~e~~~~--~~gi~~~~vrPg~v~  248 (250)
                      |.     .+.+..++.  ..||+|++|+||+|-
T Consensus       167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v~  199 (269)
T d1xu9a_         167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  199 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence            54     122223333  357999999999874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.4e-24  Score=183.95  Aligned_cols=158  Identities=16%  Similarity=0.155  Sum_probs=112.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      |+||||||+|+||++++++|+++|++|++++|... +.+.+........     +|+.|.+.++.+ +.++|+|||+|+.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~-~~~~d~VihlAa~   75 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHEN-----FELINHDVVEPL-YIEVDQIYHLASP   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTT-----EEEEECCTTSCC-CCCCSEEEECCSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCc-----eEEEehHHHHHH-HcCCCEEEECccc
Confidence            78999999999999999999999999999987332 2222222121223     455555555543 5689999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC------------CCcchhhHHHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKKMGE  229 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k~k~~~e  229 (250)
                      ...+. ...++...+++|+.|+.+++++++....++|++||.++|+...            .|..|.+.|+  .+|.++|
T Consensus        76 ~~~~~-~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~--~sK~~~E  152 (312)
T d2b69a1          76 ASPPN-YMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD--EGKRVAE  152 (312)
T ss_dssp             CSHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH--HHHHHHH
T ss_pred             CCchh-HHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHH--HHHHHHH
Confidence            65321 1223445678999999999999964334899999999997321            2344566766  5566666


Q ss_pred             HHH----HhcCCCEEEEecceEEe
Q 025619          230 DFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       230 ~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      ..+    +..|++++++||+.|||
T Consensus       153 ~~~~~~~~~~~~~~~~lR~~~vyG  176 (312)
T d2b69a1         153 TMCYAYMKQEGVEVRVARIFNTFG  176 (312)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHHHHhCCcEEEEEeeeEEC
Confidence            554    56799999999999997

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1e-23  Score=182.22  Aligned_cols=163  Identities=20%  Similarity=0.193  Sum_probs=121.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh----hHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~----~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~  157 (250)
                      |+||||||||+||++++++|+++|++|+++++...    ..... +.....+++++.+|++|.++++.++. .++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-HhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            68999999999999999999999999999976321    11111 11114578999999999999987532 27999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC-----------CCCcchhhHHHHHHHH
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN-----------ELPWSIMNLFGVLKYK  225 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~-----------~~~~~~~~~y~~~k~k  225 (250)
                      +|+...... ..+.+...+.+|+.|+.+++++++ .+++++|++||..+|+..           +.+..+.+.|+  .+|
T Consensus        81 lAa~~~~~~-~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~--~sK  157 (347)
T d1z45a2          81 FAGLKAVGE-STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG--HTK  157 (347)
T ss_dssp             CCSCCCHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH--HHH
T ss_pred             ccccccccc-cccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhH--hHH
Confidence            999764211 122334456899999999999985 688999999999999731           23344556666  667


Q ss_pred             HHHHHHHH------hcCCCEEEEecceEEe
Q 025619          226 KMGEDFVQ------KSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~~------~~gi~~~~vrPg~v~~  249 (250)
                      .++|+.+.      ..+++++++||+.+||
T Consensus       158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         158 YAIENILNDLYNSDKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHHhhccCCcEEEEeecceEe
Confidence            77776543      2578999999999986

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.88  E-value=1.1e-23  Score=183.35  Aligned_cols=164  Identities=13%  Similarity=0.155  Sum_probs=119.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh---hHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~---~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~  158 (250)
                      |+||||||+|+||++|+++|+++|++|++..++..   ..+.+.......+++++.+|++|.+.+.+++-+ ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            47999999999999999999999998655543321   122222333356899999999999999875322 69999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC----------CCCeEEEEccCcccccC-----------------CC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKFN-----------------EL  211 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~----------~~~~iV~iSS~~~~~~~-----------------~~  211 (250)
                      |+....+ ..+.++...+++|+.|+.++++++..          +.++||++||..+|+..                 ..
T Consensus        81 Aa~~~~~-~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          81 AAESHVD-RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CSCCCHH-HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             ccccchh-hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            9976422 12224455679999999999998731          35699999999999731                 12


Q ss_pred             CcchhhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          212 PWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       212 ~~~~~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +..|.+.||  .+|.++|..+    +..|++++++||+.|||
T Consensus       160 ~~~p~s~Yg--~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyG  199 (361)
T d1kewa_         160 AYAPSSPYS--ASKASSDHLVRAWRRTYGLPTIVTNCSNNYG  199 (361)
T ss_dssp             CCCCCSHHH--HHHHHHHHHHHHHHHHHCCCEEEEEECEEES
T ss_pred             CCCCCCHHH--HHHHHHHHHHHHHHHHhCCCEEEEecCceEC
Confidence            234556677  5566666554    45799999999999997

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2e-23  Score=179.85  Aligned_cols=164  Identities=17%  Similarity=0.126  Sum_probs=120.0

Q ss_pred             CEE-EEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-----HhhhhCcC---CCCCeeEEEeeCCCccCcchhhh-CCC
Q 025619           83 KLV-LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF-EGV  152 (250)
Q Consensus        83 k~v-lVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-----~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~-~~~  152 (250)
                      |+| |||||+|+||++++++|+++|++|++++|..+.     ++.+....   ...+++++.+|++|.+.+.+++. .++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            466 999999999999999999999999999996532     22221111   13468899999999999987542 368


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC---CCeEEEEccCccccc-------CCCCcchhhHHHH
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS---LKRIVLVSSVGVTKF-------NELPWSIMNLFGV  221 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~---~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~  221 (250)
                      ++++|+|+..... ..+.+....+++|+.|+.+++++++ .+   ..++|++||.++|+.       ++.+..|.+.|+.
T Consensus        81 ~~v~~~~a~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~  159 (347)
T d1t2aa_          81 TEIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGA  159 (347)
T ss_dssp             SEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             ceeeeeeeccccc-hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHH
Confidence            8999999875421 1122333456899999999999884 33   358999999999863       3445556677774


Q ss_pred             HHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                        +|.++|+.+    +..+++++++||+.+||
T Consensus       160 --sK~~aE~~~~~~~~~~~~~~~ilr~~~vyG  189 (347)
T d1t2aa_         160 --AKLYAYWIVVNFREAYNLFAVNGILFNHES  189 (347)
T ss_dssp             --HHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             --HHHHHHHHHHHHHHHhCCCEEEEEecceeC
Confidence              555666554    55799999999999987

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=4.9e-23  Score=178.70  Aligned_cols=162  Identities=15%  Similarity=0.019  Sum_probs=121.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|+||||||+|+||++|+++|+++|++|++++|.......  ..  ....++..+|++|.+.+.++ +.++|+|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~--~~~~~~~~~D~~~~~~~~~~-~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED--MFCDEFHLVDLRVMENCLKV-TEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG--GTCSEEEECCTTSHHHHHHH-HTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh--cccCcEEEeechhHHHHHHH-hhcCCeEeeccc
Confidence            55689999999999999999999999999999875432111  01  23457788999999888864 689999999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccC--------------CCCcchhhHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFN--------------ELPWSIMNLFGVLKYK  225 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~--------------~~~~~~~~~y~~~k~k  225 (250)
                      ..................|+.|+.++++++ +.+++++|++||..+++..              ..+..|.+.|+  .+|
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg--~sK  166 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG--LEK  166 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHH--HHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHH--HHH
Confidence            765322112233445578999999999988 4788999999999998721              12334556777  455


Q ss_pred             HHHHHHH----HhcCCCEEEEecceEEe
Q 025619          226 KMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .++|+.+    +..|++++++||+.+||
T Consensus       167 ~~~E~~~~~~~~~~gl~~~ilR~~~vyG  194 (363)
T d2c5aa1         167 LATEELCKHYNKDFGIECRIGRFHNIYG  194 (363)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEec
Confidence            5666544    45699999999999997

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.88  E-value=2.1e-22  Score=173.71  Aligned_cols=162  Identities=22%  Similarity=0.207  Sum_probs=118.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc----CCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~----~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .||+||||||+|+||++++++|+++|++|+++.|+.++.+.+...    ........+.+|++|.+++.++ +.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV-IKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT-TTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhh-cccchhhh
Confidence            589999999999999999999999999999999998765544221    1122334577899999999975 78999999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-c-CCCCeEEEEccCccccc--------------------------
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-P-SSLKRIVLVSSVGVTKF--------------------------  208 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~-~~~~~iV~iSS~~~~~~--------------------------  208 (250)
                      |+|+.....    ......++.|+.|+.++++++ + .+++++|++||..+...                          
T Consensus        89 ~~a~~~~~~----~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          89 HIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             ECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhccccccc----ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            999875422    123345578999999999988 4 37899999999765321                          


Q ss_pred             -CCCCcchhhHHHHHHHHHHHHH----HHHhc--CCCEEEEecceEEe
Q 025619          209 -NELPWSIMNLFGVLKYKKMGED----FVQKS--GLPFTIISLCIYCI  249 (250)
Q Consensus       209 -~~~~~~~~~~y~~~k~k~~~e~----~~~~~--gi~~~~vrPg~v~~  249 (250)
                       +..+..+...|+.  +|..+|.    +.++.  ++++++++|+.++|
T Consensus       165 ~e~~~~~p~~~Y~~--sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~G  210 (342)
T d1y1pa1         165 PESDPQKSLWVYAA--SKTEAELAAWKFMDENKPHFTLNAVLPNYTIG  210 (342)
T ss_dssp             CTTSTTHHHHHHHH--HHHHHHHHHHHHHHHHCCSSEEEEEEESEEEC
T ss_pred             cccCCCCCcCcccc--hhHhHHHHHHHhhhhcccccccceecccceeC
Confidence             1112234445664  5555553    44444  57788999999987

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-22  Score=168.05  Aligned_cols=165  Identities=15%  Similarity=0.176  Sum_probs=125.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh------hCCC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV  152 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~------~~~~  152 (250)
                      +++||++|||||++|||++++++|+++|++|++++|+.++++++.+++ ........+|+.+.+++++..      ....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCCcccccccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999998888776655 356778899999987766432      4678


Q ss_pred             cEEEEcCcCCCcCCC----C-----CCCCCCcceehHHHHHHHHHHc----c-------CCCCeEEEEccCcccccCCCC
Q 025619          153 THVICCTGTTAFPSR----R-----WDGDNTPEKVDWEGVRNLVSAL----P-------SSLKRIVLVSSVGVTKFNELP  212 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~----~-----~~~~~~~~~~N~~g~~~l~~a~----~-------~~~~~iV~iSS~~~~~~~~~~  212 (250)
                      |.+++|++.......    .     .+.....+++|+.++.++.+++    .       .+.++||++||..+..    +
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----~  156 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----G  156 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----C
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc----C
Confidence            999999887542211    0     0112245588999999888865    1       1346899999999874    3


Q ss_pred             cchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          213 WSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       213 ~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      .+....|+.+|.     .+.+..++..+||++++|+||++.
T Consensus       157 ~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~  197 (248)
T d2o23a1         157 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG  197 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCcee
Confidence            344556765554     344556677889999999999874

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=2.8e-23  Score=178.90  Aligned_cols=165  Identities=17%  Similarity=0.177  Sum_probs=123.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----hhHhhhh---CcCCCCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLF---GKQDEETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----~~~~~~~---~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +.|+||||||||+||++++++|.++|++|++++|..    ...+...   ......+++++.+|+.|....... ....|
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNA-CAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHH-HTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccc-ccccc
Confidence            457999999999999999999999999999998732    2222221   111135788999999998887754 67889


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc-------CCCCcchhhHHHHHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYK  225 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k  225 (250)
                      .++|+++....+. ...++...+++|+.|+.++++++. .+.+++|++||..+|+.       ++.+..|.+.|+.  +|
T Consensus        94 ~v~~~~a~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~--sK  170 (341)
T d1sb8a_          94 YVLHQAALGSVPR-SINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAV--TK  170 (341)
T ss_dssp             EEEECCSCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHH--HH
T ss_pred             ccccccccccccc-cccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchH--HH
Confidence            9999998654221 112334466889999999999984 67889999999999973       3445666777775  55


Q ss_pred             HHHHHHH----HhcCCCEEEEecceEEe
Q 025619          226 KMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       226 ~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .++|.++    +..+++++++||+.|||
T Consensus       171 ~~~E~~~~~~~~~~~i~~~ilR~~~v~G  198 (341)
T d1sb8a_         171 YVNELYADVFSRCYGFSTIGLRYFNVFG  198 (341)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEEECCEEC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEeceeec
Confidence            5555444    45689999999999986

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=8.2e-23  Score=175.80  Aligned_cols=161  Identities=15%  Similarity=0.121  Sum_probs=121.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      |+||||||||+||++++++|+++| ++|+++++...+...+.+   .++++++.+|++|.+++.+.+.+++|+|||+|+.
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~---~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc---CCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            479999999999999999999999 489999887655444432   5689999999999887766456789999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccCC--------------CCcchhhHHHHHHHHHH
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE--------------LPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~~--------------~~~~~~~~y~~~k~k~~  227 (250)
                      .... ..+..+...+++|+.|+.++++++.+...+++++||..+++...              ....|...|+  .+|..
T Consensus        78 ~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~--~sK~~  154 (342)
T d2blla1          78 ATPI-EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYS--VSKQL  154 (342)
T ss_dssp             CCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHH--HHHHH
T ss_pred             cccc-ccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhh--hcccc
Confidence            6522 12223344668999999999999865556778899988876321              1123445566  55666


Q ss_pred             HHHHH----HhcCCCEEEEecceEEe
Q 025619          228 GEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +|+++    +..|++++++||+.+++
T Consensus       155 ~E~~~~~~~~~~~~~~~i~r~~~~~g  180 (342)
T d2blla1         155 LDRVIWAYGEKEGLQFTLFRPFNWMG  180 (342)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECSEEC
T ss_pred             hhhhhhhhhcccCceeEEeecccccc
Confidence            66555    45699999999999987

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.87  E-value=4.6e-23  Score=177.95  Aligned_cols=164  Identities=15%  Similarity=0.122  Sum_probs=119.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh---hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ||+||||||||+||++++++|+++|++|.+++++.   .............+++++.+|++|.+.+..+ +.+.|.++|+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~-~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKL-AAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHH-HTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHH-Hhhhhhhhhh
Confidence            57999999999999999999999998766655431   1111111122256899999999999999875 7889999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccccc-------------------CCCCcchhhHH
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF-------------------NELPWSIMNLF  219 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~-------------------~~~~~~~~~~y  219 (250)
                      |+....... ..++...+++|+.|+.++++++.....++|++||..+|+.                   +..+..|.+.|
T Consensus        81 a~~~~~~~~-~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNS-LNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHH-HHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccch-hhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            987653211 1234456789999999999988654468999999988852                   11233455677


Q ss_pred             HHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          220 GVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       220 ~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +.+  |.++|..+    +..|++++++||+.|||
T Consensus       160 ~~s--K~~~E~~~~~~~~~~~i~~~ilR~~~vyG  191 (346)
T d1oc2a_         160 SST--KAASDLIVKAWVRSFGVKATISNCSNNYG  191 (346)
T ss_dssp             HHH--HHHHHHHHHHHHHHHCCEEEEEEECCEES
T ss_pred             HHH--HHHHHHHHHHHHHHcCCCEEEEeecceeC
Confidence            754  55555444    56799999999999997

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.87  E-value=5.8e-23  Score=175.66  Aligned_cols=163  Identities=20%  Similarity=0.239  Sum_probs=119.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEE------EecC--hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRL------LLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~------~~R~--~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+||||||+|+||++++++|+++|++|..      +++.  ..+...+.......+++++.+|+++....... ...+|+
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE-LRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH-TTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcc-ccccce
Confidence            47999999999999999999999986543      3321  11111112212256789999999998877753 678999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc-------CCCCcchhhHHHHHHHHH
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~  226 (250)
                      |+|+|+...... ........+++|+.|+.++++++. .+.+++|++||.++|+.       ++.+..|.+.|+.+  |.
T Consensus        80 vi~~a~~~~~~~-~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~s--K~  156 (322)
T d1r6da_          80 IVHFAAESHVDR-SIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAAS--KA  156 (322)
T ss_dssp             EEECCSCCCHHH-HHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHH--HH
T ss_pred             EEeecccccccc-cccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHH--HH
Confidence            999998764221 112334456899999999999884 67899999999999873       34456667787754  45


Q ss_pred             HHHHHH----HhcCCCEEEEecceEEe
Q 025619          227 MGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .+|..+    ++.|++++++||+.|||
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~vyG  183 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNNYG  183 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEEC
Confidence            555443    56799999999999998

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=1.4e-22  Score=177.72  Aligned_cols=165  Identities=14%  Similarity=0.120  Sum_probs=115.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh--------------------hHhhhhCcCCCCCeeEEEeeCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--------------------KATTLFGKQDEETLQVCKGDTRNP  141 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~--------------------~~~~~~~~~~~~~~~~v~~Dl~d~  141 (250)
                      ||+||||||||+||++++++|+++|++|++++.-..                    .+... ......+++++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW-KALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHH-HHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHH-HhhcCCCcEEEEccCCCH
Confidence            689999999999999999999999999999872110                    00000 011145789999999999


Q ss_pred             cCcchhhhC-CCcEEEEcCcCCCcCCCCCC--CCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCcccccCCC-----
Q 025619          142 KDLDPAIFE-GVTHVICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKFNEL-----  211 (250)
Q Consensus       142 ~~~~~~~~~-~~D~vi~~Ag~~~~~~~~~~--~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~~~~-----  211 (250)
                      +.+++++-+ ++|+|||+|+....+....+  .+...+++|+.|+.+++++++ .+ ..++++.||...++....     
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~  159 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG  159 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence            999976322 68999999987653221111  122345789999999999885 34 456788888777753211     


Q ss_pred             ---------------CcchhhHHHHHHHHHHHHHH----HHhcCCCEEEEecceEEe
Q 025619          212 ---------------PWSIMNLFGVLKYKKMGEDF----VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       212 ---------------~~~~~~~y~~~k~k~~~e~~----~~~~gi~~~~vrPg~v~~  249 (250)
                                     +..|.+.|+.  +|..+|..    .++.|++++++||+.+||
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~--sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G  214 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHL--SKVHDSHNIAFTCKAWGIRATDLNQGVVYG  214 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHH--HHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             cccccccccccccccccccccHHHH--HhhhhcccccccccccceeeeecccccccC
Confidence                           2334456774  55555544    357799999999999997

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.3e-22  Score=172.47  Aligned_cols=148  Identities=11%  Similarity=0.042  Sum_probs=110.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEEEEcCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTG  160 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~Ag  160 (250)
                      .|+||||||||+||++|+++|+++|+.|+++++..                  .+|++|.+.+++.+ ...+|.|+|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~------------------~~~~~~~~~~~~~~~~~~~d~v~~~a~   63 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDFFASERIDQVYLAAA   63 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch------------------hccccCHHHHHHHHhhcCCCEEEEcch
Confidence            36899999999999999999999999988765432                  15888888887653 237999999997


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccCC------------CCcchhhHHHHHHHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE------------LPWSIMNLFGVLKYKKM  227 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~~------------~~~~~~~~y~~~k~k~~  227 (250)
                      ..........+..+.++.|+.|+.++++++ +.+++++|++||.++|+...            .+..+.++|+  .+|.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~--~sK~~  141 (315)
T d1e6ua_          64 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA--IAKIA  141 (315)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH--HHHHH
T ss_pred             hccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHH--HHHHH
Confidence            654211111223345578999999999988 46889999999999997321            1122334566  56666


Q ss_pred             HHHHH----HhcCCCEEEEecceEEe
Q 025619          228 GEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 ~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                      +|+.+    ++.|++++++||+.|||
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyG  167 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYG  167 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEES
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEEC
Confidence            77655    45699999999999997

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.86  E-value=2.2e-22  Score=167.22  Aligned_cols=163  Identities=20%  Similarity=0.161  Sum_probs=117.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhh---HhhhhCcC--CCCCeeEEEeeCCCccCcchhh-----hC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----FE  150 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~---~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~-----~~  150 (250)
                      ++++|||||+||||++++++|+++|+ +|++++|+..+   .+++.+++  .+.++.++.+|++|.+++++++     ..
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            46999999999999999999999999 58888997533   22222222  1457889999999999887643     23


Q ss_pred             CCcEEEEcCcCCCcCCCC---CCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH-
Q 025619          151 GVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK-  225 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~---~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k-  225 (250)
                      ++|.||||||........   .+.....+++|+.|+.++.++++ .+.++||++||..+..    +......|+.+|.- 
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~----g~~~~~~YaAaka~l  164 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF----GAPGLGGYAPGNAYL  164 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----CCTTCTTTHHHHHHH
T ss_pred             cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc----CCcccHHHHHHHHhH
Confidence            689999999987632211   11123345789999999998875 4668999999998873    33334556654431 


Q ss_pred             HHHHHHHHhcCCCEEEEecceEE
Q 025619          226 KMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..+.++++..|+++++|+||.+.
T Consensus       165 ~~la~~~~~~Gi~v~~I~pg~~~  187 (259)
T d2fr1a1         165 DGLAQQRRSDGLPATAVAWGTWA  187 (259)
T ss_dssp             HHHHHHHHHTTCCCEEEEECCBC
T ss_pred             HHHHHHHHhCCCCEEECCCCccc
Confidence            12335567789999999999763

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=5.8e-22  Score=168.76  Aligned_cols=164  Identities=20%  Similarity=0.181  Sum_probs=120.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH--hhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~--~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~A  159 (250)
                      |+||||||||+||++++++|+++||+|++++|.....  +.+......++++++.+|++|.+++.+.+.. ..++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            6899999999999999999999999999999975321  1111111145789999999999988865433 678888888


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CC-CCeEEEEccCccccc-------CCCCcchhhHHHHHHHHHHHHH
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGED  230 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~-~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~~~e~  230 (250)
                      +..... ..+......++.|+.|+.+++++++ .+ .+++++.||...++.       ++.+..+.+.|+  .+|.++|.
T Consensus        81 ~~~~~~-~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~--~sK~~~E~  157 (321)
T d1rpna_          81 AQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYG--VAKLYGHW  157 (321)
T ss_dssp             SCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH--HHHHHHHH
T ss_pred             cccccc-ccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhH--HHHHHHHH
Confidence            765422 2222334456889999999999884 34 457888888877752       344556677777  45555555


Q ss_pred             HH----HhcCCCEEEEecceEEe
Q 025619          231 FV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~----~~~gi~~~~vrPg~v~~  249 (250)
                      .+    +..+++++++||+.+||
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyG  180 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHES  180 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEEC
T ss_pred             HHHHHHhhcCCcEEEEEEecccC
Confidence            44    45799999999999987

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=4.4e-22  Score=170.60  Aligned_cols=164  Identities=14%  Similarity=0.142  Sum_probs=118.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh-----hHhhhhC---cCCCCCeeEEEeeCCCccCcchhh-hCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFG---KQDEETLQVCKGDTRNPKDLDPAI-FEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~-----~~~~~~~---~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D  153 (250)
                      |++|||||||+||++|+++|+++||+|++++|..+     +.+.+..   ......++++.+|+++.+.+.+.+ ..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            79999999999999999999999999999999643     2222211   122456788999999999888653 24789


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc------CCCCeEEEEccCccccc------CCCCcchhhHHHH
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKF------NELPWSIMNLFGV  221 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~------~~~~~iV~iSS~~~~~~------~~~~~~~~~~y~~  221 (250)
                      +|||+|+..... ...+.+....+.|+.|+.+++++++      ....++++.||...++.      ++.|..|.+.|+.
T Consensus        82 ~Vih~Aa~~~~~-~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~  160 (339)
T d1n7ha_          82 EVYNLAAQSHVA-VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA  160 (339)
T ss_dssp             EEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred             hhhhcccccccc-ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence            999999975421 1112333455889999999998873      23457788888776653      3455667788886


Q ss_pred             HHHHHHHH----HHHHhcCCCEEEEecceEEe
Q 025619          222 LKYKKMGE----DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       222 ~k~k~~~e----~~~~~~gi~~~~vrPg~v~~  249 (250)
                      +|.  .+|    .+.+..+++++++||+.|||
T Consensus       161 sK~--~~E~~~~~~~~~~~~~~~ilR~~~vyG  190 (339)
T d1n7ha_         161 SKC--AAHWYTVNYREAYGLFACNGILFNHES  190 (339)
T ss_dssp             HHH--HHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             HHH--HHHHHHHHHHHHhCCCEEEEEEccccC
Confidence            554  444    34466799999999999997

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.7e-22  Score=170.38  Aligned_cols=165  Identities=18%  Similarity=0.151  Sum_probs=119.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh----------hhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-  149 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~----------~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-  149 (250)
                      |.|+||||||||+||++|+++|+++|++|++++|..          +..+.+. .....++.++.+|++|.+.+.+++. 
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELTGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHH-HHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHH-HhcCCCcEEEEeeccccccccccccc
Confidence            347999999999999999999999999999997521          1111111 1125678999999999999987542 


Q ss_pred             CCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCC--------CcchhhHHH
Q 025619          150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNEL--------PWSIMNLFG  220 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~--------~~~~~~~y~  220 (250)
                      ..+|+++|+|+...... ....+...+++|+.|+.+++++++ .+++++|++||..+++....        ...+.++|+
T Consensus        80 ~~~~~i~h~Aa~~~~~~-~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~  158 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGE-SVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYG  158 (346)
T ss_dssp             CCEEEEEECCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHH
T ss_pred             cccccccccccccCcHh-hHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHH
Confidence            36789999999765321 112234456889999999999984 68899999999999874221        122345666


Q ss_pred             HHHHHHHHHHHH----Hh-cCCCEEEEecceEEe
Q 025619          221 VLKYKKMGEDFV----QK-SGLPFTIISLCIYCI  249 (250)
Q Consensus       221 ~~k~k~~~e~~~----~~-~gi~~~~vrPg~v~~  249 (250)
                      .  +|..+|+.+    +. .+++.+++||+.+||
T Consensus       159 ~--~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G  190 (346)
T d1ek6a_         159 K--SKFFIEEMIRDLCQADKTWNAVLLRYFNPTG  190 (346)
T ss_dssp             H--HHHHHHHHHHHHHHHCTTCEEEEEEECEEEC
T ss_pred             H--HHHHHHHHHHHHHHhccCCceEEEeecceec
Confidence            4  444454433    33 589999999999997

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.84  E-value=1.8e-21  Score=170.08  Aligned_cols=165  Identities=19%  Similarity=0.177  Sum_probs=118.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEecCh------------hhHhh-hh------CcCCCCCeeEEEeeCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDP------------EKATT-LF------GKQDEETLQVCKGDTRNP  141 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~R~~------------~~~~~-~~------~~~~~~~~~~v~~Dl~d~  141 (250)
                      +|+||||||+|+||++|+++|++ .|++|+++++-.            +.... +.      .......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            35899999999999999999996 689999987410            11100 00      011134678999999999


Q ss_pred             cCcchhh--hCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCccccc----------
Q 025619          142 KDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF----------  208 (250)
Q Consensus       142 ~~~~~~~--~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~----------  208 (250)
                      +.+++++  .+++|+|||+|+....+.. .......+++|+.++.+++++++ .+.++++++||...+..          
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~-~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  160 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGES-VRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHH-HHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHhhhhhhccceeehhhccccccccccc-ccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence            9988764  3578999999997653211 11223355889999999999884 67889999998888752          


Q ss_pred             ----CCCCcchhhHHHHHHHHHHHHHHH----HhcCCCEEEEecceEEe
Q 025619          209 ----NELPWSIMNLFGVLKYKKMGEDFV----QKSGLPFTIISLCIYCI  249 (250)
Q Consensus       209 ----~~~~~~~~~~y~~~k~k~~~e~~~----~~~gi~~~~vrPg~v~~  249 (250)
                          ++.+..|.+.|+  .+|...|+.+    +.+|++++++||+.+||
T Consensus       161 ~~~~e~~~~~p~~~Y~--~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG  207 (383)
T d1gy8a_         161 EPIDINAKKSPESPYG--ESKLIAERMIRDCAEAYGIKGICLRYFNACG  207 (383)
T ss_dssp             CCBCTTSCCBCSSHHH--HHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred             cccccccCCCCCCHHH--hhHhHHHHHHHHHHHHhCCCEEEEecceeec
Confidence                123345667776  5555555544    45799999999999997

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=9.9e-22  Score=161.33  Aligned_cols=154  Identities=15%  Similarity=0.060  Sum_probs=104.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--------hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--------FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--------~~~~  152 (250)
                      ++|+||||||+||||++++++|+++|++|+++++++.+..        .....+.+|..+.++.+...        .+++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            4799999999999999999999999999999998764321        12234455655554444211        2369


Q ss_pred             cEEEEcCcCCCcCCCCC----CCCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHH
Q 025619          153 THVICCTGTTAFPSRRW----DGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYK  225 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~----~~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k  225 (250)
                      |+||||||........+    +..+..+++|+.++.++.+++.   +..++||++||.++..    +.+....|+.  +|
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----~~~~~~~Y~a--sK  146 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----GTPGMIGYGM--AK  146 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHHH--HH
T ss_pred             eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC----CccCCcccHH--HH
Confidence            99999999643211111    1123456889999888887651   2347999999998873    3333455654  44


Q ss_pred             HHHHHH-------HH--hcCCCEEEEecceEE
Q 025619          226 KMGEDF-------VQ--KSGLPFTIISLCIYC  248 (250)
Q Consensus       226 ~~~e~~-------~~--~~gi~~~~vrPg~v~  248 (250)
                      .+++.+       ++  +.||++++|+||++.
T Consensus       147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~  178 (236)
T d1dhra_         147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD  178 (236)
T ss_dssp             HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEE
T ss_pred             HHHHHHHHHHHHHhccCCCcEEEEEEEeccCc
Confidence            444433       23  358999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.84  E-value=1.8e-21  Score=167.89  Aligned_cols=168  Identities=14%  Similarity=0.084  Sum_probs=119.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh-hCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI-FEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~  158 (250)
                      ++|+||||||||+||++++++|+++|++|++++|+..+...+.+... ..+++++.+|++|++.+.+++ ...+|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            67999999999999999999999999999999998765444322211 457899999999999988754 2378999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc--CCCCeEEEEccCccccc--------CCCCcchhhHHHHHHHHHH-
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTKF--------NELPWSIMNLFGVLKYKKM-  227 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~--~~~~~iV~iSS~~~~~~--------~~~~~~~~~~y~~~k~k~~-  227 (250)
                      |+.... ...+..+...+++|+.|+.+++++++  .....+++.|+...+..        +..+..|.+.|+..+.... 
T Consensus        87 aa~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~  165 (356)
T d1rkxa_          87 AAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL  165 (356)
T ss_dssp             CSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred             hccccc-cccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchh
Confidence            987542 11122344566889999999999984  34556666666555532        2334456667775543211 


Q ss_pred             -HHHH---------HHhcCCCEEEEecceEEe
Q 025619          228 -GEDF---------VQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       228 -~e~~---------~~~~gi~~~~vrPg~v~~  249 (250)
                       ...+         ....++.++++||+.+||
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyG  197 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIG  197 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeC
Confidence             1111         124588999999999987

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=4.4e-20  Score=149.52  Aligned_cols=161  Identities=29%  Similarity=0.459  Sum_probs=120.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCe--EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~--V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +++||||||||+||++++++|+++|++  |+.+.|++++.+.+     ..+++++.+|++|.+++.++ ++++|+|||+|
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~-~~~~d~vi~~a   76 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPA-FQGIDALVILT   76 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHH-HTTCSEEEECC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-----cCCcEEEEeeeccccccccc-cccceeeEEEE
Confidence            579999999999999999999999975  66678998876654     34678999999999999875 78999999999


Q ss_pred             cCCCcCCCC------------CCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          160 GTTAFPSRR------------WDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       160 g~~~~~~~~------------~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      +....+...            .........+|+.|+.+++.... ...++..+.|+.....+.. +........+...+.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~  155 (252)
T d2q46a1          77 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-PLNKLGNGNILVWKR  155 (252)
T ss_dssp             CCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC-GGGGGGGCCHHHHHH
T ss_pred             eeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc-ccccccccchhhhhh
Confidence            876432111            11122334678899999998774 5678888888877764322 222222223445566


Q ss_pred             HHHHHHHhcCCCEEEEecceEEe
Q 025619          227 MGEDFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       227 ~~e~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ..+.+....|++++++|||+++|
T Consensus       156 ~~~~~~~~~~~~~~ilRp~~v~g  178 (252)
T d2q46a1         156 KAEQYLADSGTPYTIIRAGGLLD  178 (252)
T ss_dssp             HHHHHHHHSSSCEEEEEECEEEC
T ss_pred             hhhhhhhcccccceeecceEEEC
Confidence            67778888999999999999986

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.82  E-value=2.4e-20  Score=156.49  Aligned_cols=161  Identities=8%  Similarity=0.015  Sum_probs=106.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC-hhhHhhhhCcCC---CCCeeEE-----------------EeeCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVC-----------------KGDTRNP  141 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~-~~~~~~~~~~~~---~~~~~~v-----------------~~Dl~d~  141 (250)
                      .++|||||++|||++++++|+++|++|++++|+ .+..+++.+++.   ......+                 .+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            479999999999999999999999999998765 444444433221   2233333                 4557777


Q ss_pred             cCcchhh------hCCCcEEEEcCcCCCcCC------CCCCCCC-----------CcceehHHHHHHHHHHc--------
Q 025619          142 KDLDPAI------FEGVTHVICCTGTTAFPS------RRWDGDN-----------TPEKVDWEGVRNLVSAL--------  190 (250)
Q Consensus       142 ~~~~~~~------~~~~D~vi~~Ag~~~~~~------~~~~~~~-----------~~~~~N~~g~~~l~~a~--------  190 (250)
                      +++++++      ++++|+||||||......      ..|+...           ..+.+|+.++..+.+++        
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            6666543      689999999999865321      1111111           13467888888877753        


Q ss_pred             --c-CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceE
Q 025619          191 --P-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIY  247 (250)
Q Consensus       191 --~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v  247 (250)
                        + .+.++||+++|.....    +......|+.+|.     .+.+..++.++||++++|.||++
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t  223 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQ----PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  223 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHhcCCCCcccccccccccC----CccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence              1 2345788888877763    3344456665554     34455667789999999999974

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=2.1e-21  Score=159.15  Aligned_cols=153  Identities=14%  Similarity=0.079  Sum_probs=103.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh--------hCCCc
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--------FEGVT  153 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~--------~~~~D  153 (250)
                      +++||||||++|||++++++|+++|++|++++|++++...        ....+.+|+.+.+......        ++++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--------SNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS--------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc--------ccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            3578999999999999999999999999999998754221        2233445665544333211        46799


Q ss_pred             EEEEcCcCCCcCC-CCCC---CCCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHH
Q 025619          154 HVICCTGTTAFPS-RRWD---GDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKK  226 (250)
Q Consensus       154 ~vi~~Ag~~~~~~-~~~~---~~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~  226 (250)
                      +||||||...... ..++   ..+..+++|+.++..+.+++.   +..++||++||..+..    +.+....|+  .+|.
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~----~~~~~~~Y~--asKa  147 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----PTPSMIGYG--MAKA  147 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----CCTTBHHHH--HHHH
T ss_pred             EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC----CcccccchH--HHHH
Confidence            9999999754322 1111   122345889999888887651   2237999999988873    333445555  4555


Q ss_pred             HHHHHH-------H--hcCCCEEEEecceEE
Q 025619          227 MGEDFV-------Q--KSGLPFTIISLCIYC  248 (250)
Q Consensus       227 ~~e~~~-------~--~~gi~~~~vrPg~v~  248 (250)
                      +++.+.       +  ..+|+++.|+||++-
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i~Pg~~~  178 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD  178 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEEEESCBC
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEEecCcCc
Confidence            544333       2  257899999999873

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.82  E-value=7.4e-21  Score=162.24  Aligned_cols=163  Identities=18%  Similarity=0.194  Sum_probs=111.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecC--hhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~--~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~Ag  160 (250)
                      +||||||+|+||++++++|+++|++|+++++-  ....+.+.......+++++.+|++|.+++.+++-+ ++|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            79999999999999999999999999998742  22222211111246789999999999999876422 5799999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccC------------------------CCCcch
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN------------------------ELPWSI  215 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~------------------------~~~~~~  215 (250)
                      ...... ...++...+++|+.||.++++++. .+.+++|+.||...+...                        ..+..+
T Consensus        82 ~~~~~~-~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          82 QVAMTT-SIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccccc-cccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            865321 112334566899999999999884 566666666665544311                        112234


Q ss_pred             hhHHHHHHHHHHHH----HHHHhcCCCEEEEecceEEe
Q 025619          216 MNLFGVLKYKKMGE----DFVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       216 ~~~y~~~k~k~~~e----~~~~~~gi~~~~vrPg~v~~  249 (250)
                      ...|+..  |...|    ...+..++....+++..+++
T Consensus       161 ~~~y~~~--k~~~e~~~~~~~~~~~~~~~~~~~~~~~~  196 (338)
T d1orra_         161 HSPYGCS--KGAADQYMLDYARIFGLNTVVFRHSSMYG  196 (338)
T ss_dssp             CHHHHHH--HHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             ccccccc--cchhhhhhhhhhhccCcccccccccceee
Confidence            4556644  44444    34456789998888877763

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=6.1e-21  Score=158.22  Aligned_cols=166  Identities=11%  Similarity=0.071  Sum_probs=115.4

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .+++|++|||||+|  |||+++|+.|+++|++|++++|+++..+.+.+... ......+..|+++..++.+.+      +
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            36899999999999  89999999999999999999998654443322111 345677889999987766543      5


Q ss_pred             CCCcEEEEcCcCCCcCCCCCCC--------CCCcceehHHHHHHHHHHcc---CCCCeEEEEccCcccccCCCCcchhhH
Q 025619          150 EGVTHVICCTGTTAFPSRRWDG--------DNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~~--------~~~~~~~N~~g~~~l~~a~~---~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      +.+|++||||+...........        ....+++|+.+...+.+++.   +..+.||++||..+..    +.+....
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----~~~~~~~  157 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----AIPNYNV  157 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----BCTTTTH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc----CCCCcHH
Confidence            6789999999886532211111        01122556777777777652   2345799999987763    3334456


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|+     .+.+..++..+||++++|+||+|.
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~  192 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIR  192 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeecccccccc
Confidence            665554     334456667789999999999984

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.80  E-value=1.1e-19  Score=151.19  Aligned_cols=165  Identities=11%  Similarity=0.031  Sum_probs=107.0

Q ss_pred             CCCCCEEEEEcC--CChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcCCCCCeeEEEeeCCCccCcchhh-------
Q 025619           79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAI-------  148 (250)
Q Consensus        79 ~~~~k~vlVTGa--sG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------  148 (250)
                      .|+||++|||||  +.|||++++++|+++|++|++++|+.++. +++.+++ ..+...+++|++|++++++++       
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhcc
Confidence            478999999995  45899999999999999999999998776 3344444 456778999999987766532       


Q ss_pred             --hCCCcEEEEcCcCCCcCCCCCCCCC--------CcceehHHHHHHHHHHccC--CCCeEEEEccCcccccCCCCcchh
Q 025619          149 --FEGVTHVICCTGTTAFPSRRWDGDN--------TPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNELPWSIM  216 (250)
Q Consensus       149 --~~~~D~vi~~Ag~~~~~~~~~~~~~--------~~~~~N~~g~~~l~~a~~~--~~~~iV~iSS~~~~~~~~~~~~~~  216 (250)
                        ++.+|+++||||..........+..        ..+.+|+.+......+...  ....+++++|.....    +.+..
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----~~p~~  157 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----AMPAY  157 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS----CCTTT
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc----cCccc
Confidence              3568999999997642221111111        1113344444444444421  223344444444432    22334


Q ss_pred             hHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          217 NLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       217 ~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..|+++|.     .+.+..++.++||+|++|+||+|.
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~  194 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIR  194 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCC
Confidence            56665554     334446677889999999999874

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.80  E-value=2.7e-20  Score=149.70  Aligned_cols=146  Identities=21%  Similarity=0.262  Sum_probs=107.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .|+||||||||+||++++++|+++|+  +|++..|++...        ...+   ..+..|..++...+.+.+|+|||++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPRL---DNPVGPLAELLPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTTE---ECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------cccc---cccccchhhhhhccccchheeeeee
Confidence            37999999999999999999999998  566667654211        1232   3344444444433356799999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCC
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLP  238 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~  238 (250)
                      |......   .......+.|+.++.+++++++ .++++++++||.+++....      +.  |.++|..+|+.+++.+.+
T Consensus        71 g~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~------~~--y~~~K~~~E~~l~~~~~~  139 (212)
T d2a35a1          71 GTTIKEA---GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS------IF--YNRVKGELEQALQEQGWP  139 (212)
T ss_dssp             CCCHHHH---SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS------SH--HHHHHHHHHHHHTTSCCS
T ss_pred             eeecccc---ccccccccchhhhhhhcccccccccccccccccccccccccc------cc--hhHHHHHHhhhccccccc
Confidence            8753211   1223455889999999999885 6889999999998874322      23  447788899999998875


Q ss_pred             -EEEEecceEEe
Q 025619          239 -FTIISLCIYCI  249 (250)
Q Consensus       239 -~~~vrPg~v~~  249 (250)
                       ++++||+.|||
T Consensus       140 ~~~I~Rp~~v~G  151 (212)
T d2a35a1         140 QLTIARPSLLFG  151 (212)
T ss_dssp             EEEEEECCSEES
T ss_pred             cceeeCCcceeC
Confidence             99999999987

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.80  E-value=8.4e-20  Score=152.54  Aligned_cols=166  Identities=11%  Similarity=0.085  Sum_probs=104.9

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhh------h
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI------F  149 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~------~  149 (250)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+.+.+.. ......++.+|+++++++++.+      +
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            37899999999876  8999999999999999999999864322222111 1345677899999998887654      6


Q ss_pred             CCCcEEEEcCcCCCcCCCCCC---CCCCcceeh----HHHHHHHHHHc-c--CCCCeEEEEccCcccccCCCCcchhhHH
Q 025619          150 EGVTHVICCTGTTAFPSRRWD---GDNTPEKVD----WEGVRNLVSAL-P--SSLKRIVLVSSVGVTKFNELPWSIMNLF  219 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~~~~---~~~~~~~~N----~~g~~~l~~a~-~--~~~~~iV~iSS~~~~~~~~~~~~~~~~y  219 (250)
                      +++|++|||+|..........   .....+..+    ..+.......+ +  .....|+++|+.+....    ......|
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~----~~~~~~y  157 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----MAHYNVM  157 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----CTTCHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc----cccchhh
Confidence            789999999998653211111   111111112    22233333332 2  12234666666655532    2223445


Q ss_pred             HHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          220 GVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       220 ~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      +.+|.     .+.+..++...||++++|+||++.
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~  191 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIR  191 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCccc
Confidence            54443     334456677899999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=9e-20  Score=149.25  Aligned_cols=153  Identities=17%  Similarity=0.157  Sum_probs=107.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~vi  156 (250)
                      +|++|||||++|||+++|++|+++|++|++++|+++..          +...+++|+++........     ....|.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE----------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc----------cceEeeccccchhhhHHHHHhhhccccccchh
Confidence            48999999999999999999999999999999986532          3456789999876665432     23566777


Q ss_pred             EcCcCCCcCCC---CC----CCCCCcceehHHHHHHHHHHc-----------cCCCCeEEEEccCcccccCCCCcchhhH
Q 025619          157 CCTGTTAFPSR---RW----DGDNTPEKVDWEGVRNLVSAL-----------PSSLKRIVLVSSVGVTKFNELPWSIMNL  218 (250)
Q Consensus       157 ~~Ag~~~~~~~---~~----~~~~~~~~~N~~g~~~l~~a~-----------~~~~~~iV~iSS~~~~~~~~~~~~~~~~  218 (250)
                      ++++.......   ..    +.....+++|+.+...+++.+           +.+.++||++||..+..    +.+....
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----~~~~~~~  146 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE----GQIGQAA  146 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----CCTTCHH
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc----CCCCchh
Confidence            77765432110   00    011234577888877766543           12457999999998873    3334456


Q ss_pred             HHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          219 FGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       219 y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      |+.+|.     .+.+..++.++||++++|.||++.
T Consensus       147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~  181 (241)
T d1uaya_         147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFD  181 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccc
Confidence            665554     334456677899999999999874

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.76  E-value=4.4e-19  Score=149.61  Aligned_cols=167  Identities=13%  Similarity=0.008  Sum_probs=100.9

Q ss_pred             CCCCCEEEEEcCCC--hHHHHHHHHHHHCCCeEEEEecChhhHhhh---h------CcC-C---CCCe-eEEEeeC----
Q 025619           79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTL---F------GKQ-D---EETL-QVCKGDT----  138 (250)
Q Consensus        79 ~~~~k~vlVTGasG--~IG~~la~~L~~~G~~V~~~~R~~~~~~~~---~------~~~-~---~~~~-~~v~~Dl----  138 (250)
                      +|+||++|||||+|  |||++++++|+++|++|++.+|+++.....   .      ... .   .... ....+|.    
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            68999999999887  999999999999999999999976422111   0      000 0   0111 2233432    


Q ss_pred             ----------------CCccCcchhh------hCCCcEEEEcCcCCCcCC---C--CCCCCCCcceehHHHHHHHHHHcc
Q 025619          139 ----------------RNPKDLDPAI------FEGVTHVICCTGTTAFPS---R--RWDGDNTPEKVDWEGVRNLVSALP  191 (250)
Q Consensus       139 ----------------~d~~~~~~~~------~~~~D~vi~~Ag~~~~~~---~--~~~~~~~~~~~N~~g~~~l~~a~~  191 (250)
                                      +|..++++++      ++++|+||||||......   .  +.+.....+++|+.++..+++++.
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence                            2333333322      689999999999753211   1  111123455789999999988762


Q ss_pred             ---CCCCeEEEEccCcccccCCCCcchhhHHHHHHH-----HHHHHHHH-HhcCCCEEEEecceEE
Q 025619          192 ---SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKY-----KKMGEDFV-QKSGLPFTIISLCIYC  248 (250)
Q Consensus       192 ---~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~-----k~~~e~~~-~~~gi~~~~vrPg~v~  248 (250)
                         ...++++.+++.+.....   ......|+.+|.     .+.+..++ .++||++++|+||++.
T Consensus       165 ~~~~~~g~~~~~~~~~~~~~~---~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~  227 (297)
T d1d7oa_         165 PIMNPGGASISLTYIASERII---PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GGEEEEEEEEEEECGGGTSCC---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHhhcCCcceeeeehhhcccc---cccccceecccccccccccccchhccccceEEeccccccccc
Confidence               223456666665544211   122334544443     11222333 4679999999999874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.76  E-value=4.9e-18  Score=140.75  Aligned_cols=161  Identities=14%  Similarity=0.146  Sum_probs=100.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH-hhhhCcC---CCCCeeEEEeeCCCccCcchhh----------h
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ---DEETLQVCKGDTRNPKDLDPAI----------F  149 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~-~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~----------~  149 (250)
                      ++|||||++|||++++++|+++|++|++++|+.++. +++.+++   .......++.|+.+..+.++.+          +
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999986543 3333322   2446667777777654433211          6


Q ss_pred             CCCcEEEEcCcCCCcCCC------CCCCCCCc--------ceehHHHHHHHHHHc----c------CCCCeEEEEccCcc
Q 025619          150 EGVTHVICCTGTTAFPSR------RWDGDNTP--------EKVDWEGVRNLVSAL----P------SSLKRIVLVSSVGV  205 (250)
Q Consensus       150 ~~~D~vi~~Ag~~~~~~~------~~~~~~~~--------~~~N~~g~~~l~~a~----~------~~~~~iV~iSS~~~  205 (250)
                      +++|++|||||.......      .+......        +..|+.+........    .      .....++.+|+..+
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            799999999998652110      01111111        122333333333222    1      12346777777766


Q ss_pred             cccCCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          206 TKFNELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       206 ~~~~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                      ..    +.+....|+.+|+     .+.+..++.++||++++|+||++.
T Consensus       163 ~~----~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~  206 (266)
T d1mxha_         163 DL----PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSL  206 (266)
T ss_dssp             GS----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred             cc----cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEe
Confidence            53    3334456665543     334456667789999999999874

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.74  E-value=3e-19  Score=148.55  Aligned_cols=145  Identities=21%  Similarity=0.148  Sum_probs=108.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~~Ag~  161 (250)
                      |+||||||||+||++++++|.++|++|++++|+.                   +|++|.+++++.+- .++|+|||+|+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHcCCCEEEeeccc
Confidence            3699999999999999999999999999998752                   48899988887532 278999999987


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccccC-------CCCcchhhHHHHHHHHHHHHHHHHh
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-------ELPWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~~-------~~~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      ..... ...........|+.....+.+.+......+++.||..+++..       ..+..+...|  .+.+...|.++++
T Consensus        63 ~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~--~~~k~~~e~~~~~  139 (281)
T d1vl0a_          63 TAVDK-CEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAY--GKTKLEGENFVKA  139 (281)
T ss_dssp             CCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH--HHHHHHHHHHHHH
T ss_pred             ccccc-ccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccchhhh--hhhhhHHHHHHHH
Confidence            64211 111222334667778888877776555678888888777632       2223334444  4778888999999


Q ss_pred             cCCCEEEEecceEEe
Q 025619          235 SGLPFTIISLCIYCI  249 (250)
Q Consensus       235 ~gi~~~~vrPg~v~~  249 (250)
                      .+.+++++||+++||
T Consensus       140 ~~~~~~i~R~~~vyG  154 (281)
T d1vl0a_         140 LNPKYYIVRTAWLYG  154 (281)
T ss_dssp             HCSSEEEEEECSEES
T ss_pred             hCCCccccceeEEeC
Confidence            999999999999997

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.73  E-value=7.2e-18  Score=141.57  Aligned_cols=152  Identities=17%  Similarity=0.195  Sum_probs=112.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh----hhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~----~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++||||||||+||++++++|+++|++|++++|++.....    ....+...+++++++|++|.+++.++ +.+.++++++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~-~~~~~~~~~~   82 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA-LKQVDVVISA   82 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH-HTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhh-ccCcchhhhh
Confidence            469999999999999999999999999999997532111    11112245789999999999999865 7899999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcccccC-CCCcchhhHHHHHHHHHHHHHHHHhcC
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFN-ELPWSIMNLFGVLKYKKMGEDFVQKSG  236 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~~~~~-~~~~~~~~~y~~~k~k~~~e~~~~~~g  236 (250)
                      ++....            ..|..++.++++++ +.+..++++.||.+..... ..+..+...  +...+...+++.+..+
T Consensus        83 ~~~~~~------------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  148 (312)
T d1qyda_          83 LAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSI--TFIDKRKVRRAIEAAS  148 (312)
T ss_dssp             CCCSSS------------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTH--HHHHHHHHHHHHHHTT
T ss_pred             hhhccc------------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhh--hhHHHHHHHHhhcccc
Confidence            875421            34566677777776 4566778888887666432 222233333  3456778888899999


Q ss_pred             CCEEEEecceEEe
Q 025619          237 LPFTIISLCIYCI  249 (250)
Q Consensus       237 i~~~~vrPg~v~~  249 (250)
                      ++++++||+.+++
T Consensus       149 ~~~~i~r~~~~~g  161 (312)
T d1qyda_         149 IPYTYVSSNMFAG  161 (312)
T ss_dssp             CCBCEEECCEEHH
T ss_pred             cceEEeccceeec
Confidence            9999999999875

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.73  E-value=8e-19  Score=146.73  Aligned_cols=147  Identities=20%  Similarity=0.143  Sum_probs=107.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhC-CCcEEEEcCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT  161 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~-~~D~vi~~Ag~  161 (250)
                      |+||||||+|+||++++++|.++|+.| .++++...               +.+|++|.+.+++.+-+ ++|+|||+||.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~---------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE---------------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS---------------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc---------------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            479999999999999999999988754 44443211               23799999988875322 68999999997


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccccc-------CCCCcchhhHHHHHHHHHHHHHHHHh
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF-------NELPWSIMNLFGVLKYKKMGEDFVQK  234 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~~-------~~~~~~~~~~y~~~k~k~~~e~~~~~  234 (250)
                      .... ..+..+...++.|+.++.+++++++....+++++||..++..       +..+..|.+.|+  ++|..+|.++..
T Consensus        65 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~--~~k~~~e~~~~~  141 (298)
T d1n2sa_          65 TAVD-KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG--KTKLAGEKALQD  141 (298)
T ss_dssp             CCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH--HHHHHHHHHHHH
T ss_pred             cccc-ccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHh--hhhhhhhhhHHh
Confidence            6532 223344456688999999999999766678899998887753       223334455655  678888888888


Q ss_pred             cCCCEEEEecceEE
Q 025619          235 SGLPFTIISLCIYC  248 (250)
Q Consensus       235 ~gi~~~~vrPg~v~  248 (250)
                      ......+++++..+
T Consensus       142 ~~~~~~~~~~~~~~  155 (298)
T d1n2sa_         142 NCPKHLIFRTSWVY  155 (298)
T ss_dssp             HCSSEEEEEECSEE
T ss_pred             hhccccccccccee
Confidence            77777787777665

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.72  E-value=9.1e-18  Score=144.45  Aligned_cols=149  Identities=19%  Similarity=0.186  Sum_probs=111.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      .|+|+||||||+||++++++|+++|++|+++.|++++..... .....+++++++|++|..++.+.+++++|+++++...
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~-~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEE-LQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHH-HHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhh-hcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            479999999999999999999999999999999876543211 1114579999999999776444458899999987542


Q ss_pred             CCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhcCCCEE
Q 025619          162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKSGLPFT  240 (250)
Q Consensus       162 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~gi~~~  240 (250)
                      .             ...|+..+.+++++++ .++.++|+.||......... .. ...  +...|...+.+..+.+++++
T Consensus        82 ~-------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~-~~-~~~--~~~~k~~~~~~~~~~~~~~~  144 (350)
T d1xgka_          82 Q-------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-WP-AVP--MWAPKFTVENYVRQLGLPST  144 (350)
T ss_dssp             T-------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-CC-CCT--TTHHHHHHHHHHHTSSSCEE
T ss_pred             c-------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc-cc-chh--hhhhHHHHHHHHHhhccCce
Confidence            2             1467888999999884 68888888888766542211 11 111  22456778888999999999


Q ss_pred             EEecceEE
Q 025619          241 IISLCIYC  248 (250)
Q Consensus       241 ~vrPg~v~  248 (250)
                      ++||++++
T Consensus       145 ~vr~~~~~  152 (350)
T d1xgka_         145 FVYAGIYN  152 (350)
T ss_dssp             EEEECEEG
T ss_pred             eeeeceee
Confidence            99999875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.72  E-value=4.2e-18  Score=146.03  Aligned_cols=163  Identities=12%  Similarity=0.074  Sum_probs=105.6

Q ss_pred             CCEEEEEc--CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh----CcCC----------CCCeeEEEe---------
Q 025619           82 SKLVLVAG--GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF----GKQD----------EETLQVCKG---------  136 (250)
Q Consensus        82 ~k~vlVTG--asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~----~~~~----------~~~~~~v~~---------  136 (250)
                      +|++||||  +++|||++++++|+++|++|++.+++........    +...          ........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            58999999  5579999999999999999999988754322110    0000          011123333         


Q ss_pred             -----------eCCCccCcchhh------hCCCcEEEEcCcCCCcCC-----CCCCCCCCcceehHHHHHHHHHHcc---
Q 025619          137 -----------DTRNPKDLDPAI------FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP---  191 (250)
Q Consensus       137 -----------Dl~d~~~~~~~~------~~~~D~vi~~Ag~~~~~~-----~~~~~~~~~~~~N~~g~~~l~~a~~---  191 (250)
                                 |+++.+++++.+      ++++|++|||||......     .++++....+++|+.++.++++++.   
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       555666666533      689999999999754211     1112223455889999888888762   


Q ss_pred             CCCCeEEEEccCcccccCCCCcch-hhHHHHHHH-----HHHHHHHHH-hcCCCEEEEecceEE
Q 025619          192 SSLKRIVLVSSVGVTKFNELPWSI-MNLFGVLKY-----KKMGEDFVQ-KSGLPFTIISLCIYC  248 (250)
Q Consensus       192 ~~~~~iV~iSS~~~~~~~~~~~~~-~~~y~~~k~-----k~~~e~~~~-~~gi~~~~vrPg~v~  248 (250)
                      +..++||++||.++...    ++. ...|+.+|.     .+.+..++. ++||||++|+||++-
T Consensus       162 ~~~GsIv~iss~~~~~~----~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKV----VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSC----CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccccceeehhccc----ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence            23468999999877642    221 234554443     333445554 479999999999874

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.70  E-value=1.2e-17  Score=139.25  Aligned_cols=149  Identities=19%  Similarity=0.247  Sum_probs=108.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh-----hCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-----FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~-----~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      .|+||||||||+||++++++|+++|++|++++|+.......     ...+...+++++.+|+.+...+.+. +.++|.++
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~vi   81 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEA-VKNVDVVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHH-HHTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhh-hhhceeee
Confidence            46899999999999999999999999999999976432211     1111245788999999999888765 68899999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCCCCcchhhHHHHHHHHHHHHHHHHhc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFVQKS  235 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~~~~~~~~~y~~~k~k~~~e~~~~~~  235 (250)
                      |+++..                +..++.++++++. .+..++++.|+................  +...+...+.++++.
T Consensus        82 ~~~~~~----------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  143 (307)
T d1qyca_          82 STVGSL----------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKS--VFEVKAKVRRAIEAE  143 (307)
T ss_dssp             ECCCGG----------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHH--HHHHHHHHHHHHHHH
T ss_pred             eccccc----------------ccchhhHHHHHHHHhccccceeeeccccccccccccccccc--cccccccccchhhcc
Confidence            998643                2234456667663 577788888886665443332222222  224566777888889


Q ss_pred             CCCEEEEecceEEe
Q 025619          236 GLPFTIISLCIYCI  249 (250)
Q Consensus       236 gi~~~~vrPg~v~~  249 (250)
                      |++++++||+.++|
T Consensus       144 ~~~~~i~r~~~v~g  157 (307)
T d1qyca_         144 GIPYTYVSSNCFAG  157 (307)
T ss_dssp             TCCBEEEECCEEHH
T ss_pred             CCCceecccceecC
Confidence            99999999999975

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.68  E-value=9e-17  Score=132.41  Aligned_cols=148  Identities=14%  Similarity=0.144  Sum_probs=91.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-------hCCCcE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH  154 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-------~~~~D~  154 (250)
                      ||+||||||++|||++++++|+++|++|++++|+.++               ...|+.+.+..+...       .+.+|+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            6899999999999999999999999999999997542               134666554443321       346999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-----cCCCCeEEEEccCccccc---------------------
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF---------------------  208 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-----~~~~~~iV~iSS~~~~~~---------------------  208 (250)
                      ++||||..... .   .......+|..+...+.+..     +.......++++......                     
T Consensus        66 lv~~Ag~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s  141 (257)
T d1fjha_          66 LVLCAGLGPQT-K---VLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA  141 (257)
T ss_dssp             EEECCCCCTTC-S---SHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred             EEEcCCCCCcH-H---HHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence            99999875411 1   11223356777776666543     223445555555433210                     


Q ss_pred             ---CCCCcchhhHHHHHHH-----HHHHHHHHHhcCCCEEEEecceEE
Q 025619          209 ---NELPWSIMNLFGVLKY-----KKMGEDFVQKSGLPFTIISLCIYC  248 (250)
Q Consensus       209 ---~~~~~~~~~~y~~~k~-----k~~~e~~~~~~gi~~~~vrPg~v~  248 (250)
                         ..........|+.+|.     .+.+..++.++||++++|+||++-
T Consensus       142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~  189 (257)
T d1fjha_         142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE  189 (257)
T ss_dssp             HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred             ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcC
Confidence               0001112234554443     223335567789999999999984

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.68  E-value=2.1e-18  Score=136.85  Aligned_cols=83  Identities=20%  Similarity=0.210  Sum_probs=72.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+|+||||+||||++++++|+++|++|++++|+.++++++.+.+. ..++.+..+|++|.++++++ ++++|+|||
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~iDilin   98 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VKGAHFVFT   98 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TTTCSEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHH-hcCcCeeee
Confidence            6899999999999999999999999999999999999998877655432 23556788999999999875 799999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      |||..
T Consensus        99 ~Ag~g  103 (191)
T d1luaa1          99 AGAIG  103 (191)
T ss_dssp             CCCTT
T ss_pred             cCccc
Confidence            99964

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=6.9e-16  Score=128.94  Aligned_cols=157  Identities=12%  Similarity=0.062  Sum_probs=94.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh--hhHhhhhCcCCCCCeeEEE-eeCCCccCcchhhhCCCcEEEEcCc
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP--EKATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~--~~~~~~~~~~~~~~~~~v~-~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ||||||+|+||++++++|+++|+ +|+++++-.  .+...+.+   ........ .|+.+...... .+..+++++|.|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD---LNIADYMDKEDFLIQIMAGE-EFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT---SCCSEEEEHHHHHHHHHTTC-CCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc---cchhhhccchHHHHHHhhhh-cccchhhhhhhcc
Confidence            89999999999999999999996 588876322  22222211   11111111 11111111111 1467899999998


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEccCcccccCC-------CCcchhhHHHHHHHH--HHHHH
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE-------LPWSIMNLFGVLKYK--KMGED  230 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS~~~~~~~~-------~~~~~~~~y~~~k~k--~~~e~  230 (250)
                      .....   ..+.....+.|+.++.++++++. .+++ +|+.||..++....       .+..+.+.|+.+|..  ..++.
T Consensus        78 ~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          78 CSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             CCCTT---CCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccc---cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchhhhhccc
Confidence            65422   11223345778999999999885 4554 55666555554211       122345677755542  22334


Q ss_pred             HHHhcCCCEEEEecceEEe
Q 025619          231 FVQKSGLPFTIISLCIYCI  249 (250)
Q Consensus       231 ~~~~~gi~~~~vrPg~v~~  249 (250)
                      +.++.+++++++||+.+||
T Consensus       154 ~~~~~~~~~~~~r~~~vyG  172 (307)
T d1eq2a_         154 ILPEANSQIVGFRYFNVYG  172 (307)
T ss_dssp             HGGGCSSCEEEEEECEEES
T ss_pred             cccccccccccccceeEee
Confidence            4466899999999999997

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.61  E-value=5e-08  Score=71.27  Aligned_cols=73  Identities=25%  Similarity=0.254  Sum_probs=62.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |+|+|.|+ |.+|+.+++.|.++|++|+++++++++.+.+.+..   +..++.+|.+|++.++++-....|.++-..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            58999997 99999999999999999999999999888765432   567899999999999876567889888753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.50  E-value=5e-08  Score=74.95  Aligned_cols=44  Identities=23%  Similarity=0.222  Sum_probs=39.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ  126 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~  126 (250)
                      |+|.|+||+|+||+++++.|+++|++|++.+|++++++++.+++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            46889999999999999999999999999999999988776543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.44  E-value=3.4e-07  Score=69.44  Aligned_cols=74  Identities=24%  Similarity=0.187  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +|+|+|.|| |.+|+.+++.|+++|++|++++|+.++++.+.+...  .......+..+...... .....|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~--~~~~~~~~~~~~~~~~~-~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDA-EVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT--TEEEEECCTTCHHHHHH-HHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc--ccccccccccchhhhHh-hhhccceeEeec
Confidence            589999986 999999999999999999999999999998876542  33334445544444443 356778887654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.43  E-value=2.8e-07  Score=67.15  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=61.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      |+++|.|+ |-+|+++++.|.++|++|++++.++++.+.+.+    .....+.+|.+|++.++++-+.++|.+|-..+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----TCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----hCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            56888875 899999999999999999999999999887653    34567889999999888764678998887653

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.32  E-value=6.9e-07  Score=68.59  Aligned_cols=102  Identities=18%  Similarity=0.197  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi  156 (250)
                      +|++|||+||+|++|...++.....|++|+++++++++.+.+.+.    +...+ .|-.+++..++..    -+++|+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~----Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFDAA-FNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEE-EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh----hhhhh-cccccccHHHHHHHHhhcCCCceeE
Confidence            578999999999999999998888999999999999887765532    22222 4555554444321    34799999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      ++.|...                   ....++.++.+ ++++.++....++
T Consensus       104 D~vG~~~-------------------~~~~~~~l~~~-G~~v~~G~~~~~~  134 (182)
T d1v3va2         104 DNVGGEF-------------------LNTVLSQMKDF-GKIAICGAISVYN  134 (182)
T ss_dssp             ESSCHHH-------------------HHHHGGGEEEE-EEEEECCCGGGTT
T ss_pred             EecCchh-------------------hhhhhhhccCC-CeEEeecceeecc
Confidence            9886211                   12344444444 6788877665553

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.25  E-value=2.4e-06  Score=63.11  Aligned_cols=112  Identities=20%  Similarity=0.179  Sum_probs=73.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCCCC-eeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~-~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      +|.|+||+|.+|++++..|+.+|.  ++++++.++.+.+.+.  +.+.. ......-+ ...+..+. +++.|+||..||
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~D--l~~~~~~~~~~~~~-~~~~~~~~-~~~aDivVitag   77 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAAD--LSHIETRATVKGYL-GPEQLPDC-LKGCDVVVIPAG   77 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHH--HTTSSSSCEEEEEE-SGGGHHHH-HTTCSEEEECCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHH--HhhhhhhcCCCeEE-cCCChHHH-hCCCCEEEECCC
Confidence            789999999999999999999885  6999998876544321  11111 11122222 23444443 688999999999


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      ....+   .....+..+.|..-.+.+++.+. .+..-++.+-|
T Consensus        78 ~~~~~---g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          78 VPRKP---GMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CCCCT---TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cCCCC---CCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            75433   22334566889999999999884 34444444443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.19  E-value=1.1e-06  Score=67.24  Aligned_cols=102  Identities=18%  Similarity=0.214  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC--ccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|||+||+||+|...++.....|++|+++++++++.+.+.+.  ... .++  |-.+  .+.++..--+++|+||.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l--Ga~-~vi--~~~~~~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL--GAK-EVL--AREDVMAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT--TCS-EEE--ECC---------CCSCCEEEEEEC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc--ccc-eee--ecchhHHHHHHHhhccCcCEEEEc
Confidence            467899999999999999998888999999999998887765532  112 122  3222  222221113479999999


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      .|-..                   ....++.++.+ +|+|.++......
T Consensus       106 vgg~~-------------------~~~~l~~l~~~-Griv~~G~~~g~~  134 (176)
T d1xa0a2         106 VGGRT-------------------LATVLSRMRYG-GAVAVSGLTGGAE  134 (176)
T ss_dssp             STTTT-------------------HHHHHHTEEEE-EEEEECSCCSSSC
T ss_pred             CCchh-------------------HHHHHHHhCCC-ceEEEeecccCcc
Confidence            87432                   12344555543 6888888766553

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.15  E-value=6.9e-06  Score=60.70  Aligned_cols=110  Identities=13%  Similarity=0.160  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcC-----CCCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~-----~~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +.++|.|.|+ |.+|..++..|+.+|  .+|+++++++++.+....++     ..........|   .   + . +.++|
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~---~-~-~~~ad   74 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---Y---S-D-CKDAD   74 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---G---G-G-GTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---H---H-H-hcccc
Confidence            3468999995 999999999999988  48999999987654322111     01222333333   2   2 2 46789


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      +||.+||....+.   ....+..+.|..-.+.+.+.+. .+.+-++.+-|
T Consensus        75 ivvitag~~~~~g---~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          75 LVVITAGAPQKPG---ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEecccccCCC---CCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            9999999765332   2334455778888888888773 44444554444

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2.9e-06  Score=64.38  Aligned_cols=99  Identities=21%  Similarity=0.247  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh---h-hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA---I-FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~---~-~~~~D~vi  156 (250)
                      .+++|||+||+|++|...++.+...|++|+++++++++.+.+.+ +   +... ..|.++.+..++.   . -+++|+++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~---Ga~~-vi~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-N---GAHE-VFNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccc-c---Cccc-ccccccccHHHHhhhhhccCCceEEe
Confidence            57799999999999999999888899999999999888766543 2   2221 2476665433321   1 23589999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCc
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG  204 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~  204 (250)
                      .+.|..                   .....++.++++ +++|.++...
T Consensus       103 d~~g~~-------------------~~~~~~~~l~~~-G~iv~~G~~~  130 (174)
T d1yb5a2         103 EMLANV-------------------NLSKDLSLLSHG-GRVIVVGSRG  130 (174)
T ss_dssp             ESCHHH-------------------HHHHHHHHEEEE-EEEEECCCCS
T ss_pred             ecccHH-------------------HHHHHHhccCCC-CEEEEEecCC
Confidence            987621                   122345566554 6888886543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.10  E-value=2.2e-06  Score=64.40  Aligned_cols=74  Identities=24%  Similarity=0.275  Sum_probs=57.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.+++|||.|+ |.+|..+++.|..+|+ ++.++.|+.++.+++.+.+.   ...     .+.+++.+. +...|+||+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~-----~~~~~~~~~-l~~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA-----VRFDELVDH-LARSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE-----CCGGGHHHH-HHTCSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc-----ccchhHHHH-hccCCEEEE
Confidence            467889999997 9999999999999998 69999999999888765442   222     233455554 678999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            98753

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.10  E-value=2.5e-06  Score=63.06  Aligned_cols=110  Identities=16%  Similarity=0.155  Sum_probs=68.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChh--hHhhhhCcC------CCCCeeEEEeeCCCccCcchhhhCCC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPE--KATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~--~~~~~~~~~------~~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      ++|.|.||+|.+|..++..|+.+|.  ++++++++++  +++....++      .....+....-   .++.+ . +.+.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~---~~d~~-~-l~~a   75 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES---DENLR-I-IDES   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE---TTCGG-G-GTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC---cchHH-H-hccc
Confidence            4799999999999999999999984  8999998763  222221111      01222222111   11233 2 5789


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEE
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLV  200 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~i  200 (250)
                      |+||-+||....+.+   ...+.++.|..-.+.+.+.+. .+.+.++.+
T Consensus        76 DvVVitAG~~~~~g~---sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          76 DVVIITSGVPRKEGM---SRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             SEEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eEEEEecccccCCCC---ChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            999999997653322   223355778888888888773 344555544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=98.06  E-value=1.4e-06  Score=66.04  Aligned_cols=101  Identities=20%  Similarity=0.178  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC--ccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d--~~~~~~~~~~~~D~vi~~  158 (250)
                      .+..|||+||+||+|...++.....|++|+++++++++.+.+.+.  .... ++  |-.|  .+.+....-+++|+++.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l--Gad~-vi--~~~~~~~~~~~~~~~~gvd~vid~   97 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL--GASE-VI--SREDVYDGTLKALSKQQWQGAVDP   97 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH--TCSE-EE--EHHHHCSSCCCSSCCCCEEEEEES
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh--cccc-eE--eccchhchhhhcccCCCceEEEec
Confidence            355799999999999999987777899999999998887776532  1121 22  2222  222322213479999998


Q ss_pred             CcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       159 Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                      .|-..                   ....++.++. .+++|.++.....
T Consensus        98 vgg~~-------------------~~~~~~~l~~-~G~iv~~G~~~g~  125 (167)
T d1tt7a2          98 VGGKQ-------------------LASLLSKIQY-GGSVAVSGLTGGG  125 (167)
T ss_dssp             CCTHH-------------------HHHHHTTEEE-EEEEEECCCSSCS
T ss_pred             CcHHH-------------------HHHHHHHhcc-CceEEEeeccCCC
Confidence            76321                   1224444444 3578887766654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.06  E-value=4.2e-06  Score=63.85  Aligned_cols=100  Identities=20%  Similarity=0.211  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~v  155 (250)
                      .+++|||+||+|++|..+++.+...|++|+++++++++.+.+.+.    +... ..|..+++ +.+.+     -.++|++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~----Ga~~-vi~~~~~~-~~~~v~~~t~~~g~d~v   98 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GVEY-VGDSRSVD-FADEILELTDGYGVDVV   98 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CCSE-EEETTCST-HHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccccccc----cccc-cccCCccC-HHHHHHHHhCCCCEEEE
Confidence            467999999999999999998888899999999998887766532    2222 24555543 32222     1469999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                      |.+.|..                   .....++.++.+ +++|.++.....
T Consensus        99 ~d~~g~~-------------------~~~~~~~~l~~~-G~~v~~G~~~~~  129 (183)
T d1pqwa_          99 LNSLAGE-------------------AIQRGVQILAPG-GRFIELGKKDVY  129 (183)
T ss_dssp             EECCCTH-------------------HHHHHHHTEEEE-EEEEECSCGGGT
T ss_pred             Eecccch-------------------HHHHHHHHhcCC-CEEEEEccCCCC
Confidence            9988621                   112345556554 688888655444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.04  E-value=2.2e-06  Score=65.08  Aligned_cols=74  Identities=18%  Similarity=0.224  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++|||+||+|++|...++.+...|++|+++++++++.+.+.+ +   +.+. ..|..+....... .+++|++|.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-l---Ga~~-~i~~~~~~~~~~~-~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-L---GAEE-AATYAEVPERAKA-WGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-T---TCSE-EEEGGGHHHHHHH-TTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-c---ccce-eeehhhhhhhhhc-cccccccccccc
Confidence            57899999999999999999888899999999999887766543 2   2221 1244332111111 457999999765

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=2.9e-06  Score=55.58  Aligned_cols=43  Identities=26%  Similarity=0.265  Sum_probs=38.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      .+++|||+||+|++|...++.+...|++|+++.+++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4678999999999999999988889999999999998877654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=8.3e-06  Score=62.42  Aligned_cols=82  Identities=15%  Similarity=0.163  Sum_probs=61.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhC---cCC-CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFG---KQD-EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~---~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++++|+|+|.|+ ||.|++++..|.+.|. +++++.|++++.+.+.+   .+. .........|+.+.+.+... ....|
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d   92 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA-LASAD   92 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHTCS
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhh-hcccc
Confidence            468899999996 8999999999999997 68999998776554322   111 22344567888888877754 67899


Q ss_pred             EEEEcCcCC
Q 025619          154 HVICCTGTT  162 (250)
Q Consensus       154 ~vi~~Ag~~  162 (250)
                      +|||+....
T Consensus        93 iiIN~Tp~G  101 (182)
T d1vi2a1          93 ILTNGTKVG  101 (182)
T ss_dssp             EEEECSSTT
T ss_pred             eeccccCCc
Confidence            999997653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=9.9e-06  Score=59.73  Aligned_cols=114  Identities=20%  Similarity=0.178  Sum_probs=69.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-CC--CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLS-RN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~-~G--~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|.|+|++|.+|.+++..|+. .+  .++++++.++. .+....++.+........-+...++.+ + +.+.|+||.+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~~~~~~~~-~-~~~aDvvvita   77 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATP-A-LEGADVVLISA   77 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEECSSCCHH-H-HTTCSEEEECC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEEEcCCCcc-c-cCCCCEEEECC
Confidence            4799999999999999988764 34  68999987643 322211111111111111122233333 3 57899999999


Q ss_pred             cCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       160 g~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      |....+.   ....+..+.|..-.+.+.+.+. .+. ..+|.+|.
T Consensus        78 G~~~k~g---~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          78 GVRRKPG---MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             SCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CccCCCC---cchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            9864332   2334566889888888888873 333 34555553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=4.3e-06  Score=62.08  Aligned_cols=75  Identities=15%  Similarity=0.199  Sum_probs=61.2

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      +|+|.|. |-+|..++++|.++|++|+++..++++.....+.....++.++.+|.+|++.++++-..+.|.+|-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            6888886 89999999999999999999999887544333222245789999999999999876577899998765

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=4.6e-06  Score=63.69  Aligned_cols=102  Identities=15%  Similarity=0.065  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+.+|||+||+||+|...++.....|++|++++|++++.+.+.+.    +...+ .|-.+.+..+...-...|.+|.+.|
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~l----Gad~v-i~~~~~~~~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL----GASRV-LPRDEFAESRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TEEEE-EEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhh----ccccc-cccccHHHHHHHHhhcCCeeEEEcc
Confidence            345899999999999999998888999999999999987765432    23222 3443433333211234688888775


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      -.                   -....++.++. .+++|.++......
T Consensus       106 g~-------------------~~~~~l~~l~~-~Griv~~G~~~~~~  132 (177)
T d1o89a2         106 DK-------------------VLAKVLAQMNY-GGCVAACGLAGGFT  132 (177)
T ss_dssp             HH-------------------HHHHHHHTEEE-EEEEEECCCTTCSC
T ss_pred             hH-------------------HHHHHHHHhcc-ccceEeecccCCcc
Confidence            21                   12234444443 36888887766553

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=6e-06  Score=62.72  Aligned_cols=76  Identities=17%  Similarity=0.095  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--h--hCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--I--FEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~--~~~~D~vi  156 (250)
                      .+++|+|+||+|++|..+++.....|++|+++++++++.+.+++.    +.+ ...|.++++-.++.  .  -+++|+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l----Ga~-~vi~~~~~d~~~~v~~~t~g~g~d~v~  102 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW-QVINYREEDLVERLKEITGGKKVRVVY  102 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc----CCe-EEEECCCCCHHHHHHHHhCCCCeEEEE
Confidence            467999999999999999998888899999999999988776542    222 22476665433321  1  23689999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .+.|.
T Consensus       103 d~~g~  107 (179)
T d1qora2         103 DSVGR  107 (179)
T ss_dssp             ECSCG
T ss_pred             eCccH
Confidence            98863

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.94  E-value=3.8e-05  Score=56.64  Aligned_cols=109  Identities=19%  Similarity=0.259  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      .+++|.|.|| |.+|..++..|+.+|.  +++++++++++++....++.      .....+...   |   .+ . +.+.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---d---~~-~-l~da   75 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG---D---YD-D-CRDA   75 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC---C---GG-G-TTTC
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEEC---C---HH-H-hccc
Confidence            4678999996 9999999999999885  79999999887544322111      122222222   2   22 2 5678


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVS  201 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iS  201 (250)
                      |+||.+||....+   .....+....|..-.+.+.+.++ .+. ..++.+|
T Consensus        76 Dvvvitag~~~~~---~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          76 DLVVICAGANQKP---GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             SEEEECCSCCCCT---TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eeEEEeccccccc---CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            9999999976432   22334455778887777877763 333 3455544

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=2.6e-05  Score=58.87  Aligned_cols=75  Identities=20%  Similarity=0.221  Sum_probs=54.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..++|+|+|.|| ||.+++++..|.+.|.+|+++.|+.++.+++.+.+.. ..+..  .+.   ++..   ...+|+|||
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~---~~~~---~~~~dliIN   85 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSM---DELE---GHEFDLIIN   85 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCS---GGGT---TCCCSEEEE
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--ccc---cccc---ccccceeec
Confidence            357899999995 9999999999999999999999999998887654431 12221  222   1111   346899999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +....
T Consensus        86 ~Tp~G   90 (170)
T d1nyta1          86 ATSSG   90 (170)
T ss_dssp             CCSCG
T ss_pred             ccccC
Confidence            87543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=2.5e-05  Score=61.69  Aligned_cols=77  Identities=16%  Similarity=0.269  Sum_probs=56.0

Q ss_pred             CCCCCEEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc
Q 025619           79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK  142 (250)
Q Consensus        79 ~~~~k~vlVTGa----------------sG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~  142 (250)
                      ++.||+||||+|                ||-.|.+||+++.++|++|+++.-......       ...+..+  .+.+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~-------p~~~~~~--~~~t~~   73 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT-------PPFVKRV--DVMTAL   73 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC-------CTTEEEE--ECCSHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc-------ccccccc--eehhhH
Confidence            678999999987                789999999999999999999866442110       2344443  344444


Q ss_pred             Ccchhh---hCCCcEEEEcCcCCCc
Q 025619          143 DLDPAI---FEGVTHVICCTGTTAF  164 (250)
Q Consensus       143 ~~~~~~---~~~~D~vi~~Ag~~~~  164 (250)
                      ++.+++   +...|++|++|++..+
T Consensus        74 ~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          74 EMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHHHhhhccceeEeeeechhhh
Confidence            444433   5689999999998764

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.79  E-value=3.4e-05  Score=57.68  Aligned_cols=113  Identities=15%  Similarity=0.124  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC----CCeeEEEeeCCCccCcchhhhCCCc
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE----ETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      .+.++|.|.|+ |.+|..++..|+.+|.  ++++++++++..+....++.+    .+...+.. -   .+.++  +.+.|
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~-~---~d~~~--~~~ad   90 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVA-D---KDYSV--TANSK   90 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEE-C---SSGGG--GTTCS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEe-c---cchhh--ccccc
Confidence            34568999996 9999999999999986  799999998766443222111    01111111 1   22232  56789


Q ss_pred             EEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEcc
Q 025619          154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iSS  202 (250)
                      +||..||....+.+   ...+..+.|..-.+.+.+.++ .+.+ -++++|-
T Consensus        91 iVVitAg~~~~~g~---tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          91 IVVVTAGVRQQEGE---SRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             EEEECCSCCCCTTC---CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEecCCccccCc---chHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            99999997653322   233455778888888888774 3433 4555543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.78  E-value=5.6e-05  Score=56.66  Aligned_cols=77  Identities=18%  Similarity=0.154  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc--Ccchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~--~~~~~~----~~~~D~  154 (250)
                      .+.+|+|+| +|+||...++.+...|++|+++++++++++.+.+.  ... ..+..|-.+.+  ++.+.+    -+++|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~--ga~-~~~~~~~~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC--GAD-VTLVVDPAKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TCS-EEEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc--CCc-EEEeccccccccchhhhhhhcccccCCce
Confidence            456899997 79999999998888999999999999988765432  112 12233322221  121111    246999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.77  E-value=2.3e-05  Score=58.95  Aligned_cols=76  Identities=16%  Similarity=0.219  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+.+|+|.|+ |++|...++.+...|++|+++++++++++...+.    +...+ .|-.+...+.+...++.|+++.+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l----Ga~~~-i~~~~~~~~~~~~~~~~d~vi~~~~  100 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GADHY-IATLEEGDWGEKYFDTFDLIVVCAS  100 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCSEE-EEGGGTSCHHHHSCSCEEEEEECCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc----CCcEE-eeccchHHHHHhhhcccceEEEEec
Confidence            4679999986 9999998887778899999999999888765432    22211 2433333333333567999999877


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus       101 ~~  102 (168)
T d1piwa2         101 SL  102 (168)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.70  E-value=4.6e-05  Score=57.56  Aligned_cols=76  Identities=16%  Similarity=0.090  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC----CCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~----~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .|+|.|.|| |.+|..++..|+++|++|.+++|++++.+.+.+...    .+.............+..++ +++.|++|.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~aD~iii   78 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA-VKDADVILI   78 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH-HTTCSEEEE
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhH-hcCCCEEEE
Confidence            378999996 999999999999999999999999988776543210    11111111111112234443 678999998


Q ss_pred             cC
Q 025619          158 CT  159 (250)
Q Consensus       158 ~A  159 (250)
                      +.
T Consensus        79 ~v   80 (184)
T d1bg6a2          79 VV   80 (184)
T ss_dssp             CS
T ss_pred             EE
Confidence            65

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.69  E-value=4.5e-05  Score=57.60  Aligned_cols=75  Identities=23%  Similarity=0.255  Sum_probs=54.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC-CCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ..++|+|+|.| +||.+++++..|.+.+.+|+++.|+.++++.+.+.+.. ..+..+..|     ...   ...+|+|||
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----~~~---~~~~diiIN   85 (171)
T d1p77a1          15 LRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-----SIP---LQTYDLVIN   85 (171)
T ss_dssp             CCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----GCC---CSCCSEEEE
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc-----ccc---ccccceeee
Confidence            45789999998 58999999999999888999999999998887654421 223222222     111   467899999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +....
T Consensus        86 ~tp~g   90 (171)
T d1p77a1          86 ATSAG   90 (171)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            97654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.68  E-value=3.4e-05  Score=57.63  Aligned_cols=112  Identities=18%  Similarity=0.183  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC----C-CCeeEEEeeCCCccCcchhhhCCC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD----E-ETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~----~-~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      ++..+|.|.|+ |.+|..++..|+.+|.  +++++++++++++....++.    . ..-..+..  .|   .+ . +.+.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d---~~-~-~~~a   88 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KD---YN-V-SANS   88 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SS---GG-G-GTTE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cc---hh-h-hccc
Confidence            34457999995 9999999999999985  79999999876544322111    1 11111221  12   22 2 4678


Q ss_pred             cEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCC-CeEEEEcc
Q 025619          153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVSS  202 (250)
Q Consensus       153 D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~-~~iV~iSS  202 (250)
                      |+||..||....+.+   ...+.++.|..-.+.+.+.++ .+. +.++.+|.
T Consensus        89 divvitag~~~~~~~---~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          89 KLVIITAGARMVSGQ---TRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EEEEECCSCCCCTTT---CSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             cEEEEecccccCCCC---CHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            999999997654432   334455778888777777663 333 34555543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=4.2e-05  Score=57.37  Aligned_cols=74  Identities=14%  Similarity=0.159  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .|.+|+|.|+ |+||...++.+...|++++++++++++.+.+.+ +   +.. ...|..+.+.... ..+++|++|.+.|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~-l---Gad-~~i~~~~~~~~~~-~~~~~D~vid~~g  102 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L---GAD-EVVNSRNADEMAA-HLKSFDFILNTVA  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCS-EEEETTCHHHHHT-TTTCEEEEEECCS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc-c---CCc-EEEECchhhHHHH-hcCCCceeeeeee
Confidence            4679999986 999999998888899999999999887765432 2   121 1246666554443 2568999999987


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      .
T Consensus       103 ~  103 (168)
T d1uufa2         103 A  103 (168)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.64  E-value=5.2e-05  Score=57.61  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccC--cchhh-----hCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD--LDPAI-----FEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~--~~~~~-----~~~~  152 (250)
                      .|.+|||+|| |+||...++.+...|+ +|+++++++++.+.+.+ +   +.. ...|..+.+.  ..+.+     -.++
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~-~vi~~~~~~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-I---GAD-LTLNRRETSVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-T---TCS-EEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccccc-c---cce-EEEeccccchHHHHHHHHHhhCCCCc
Confidence            5789999996 9999999999989998 79999999998876543 2   221 1235554331  11112     1368


Q ss_pred             cEEEEcCcC
Q 025619          153 THVICCTGT  161 (250)
Q Consensus       153 D~vi~~Ag~  161 (250)
                      |+||.++|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999875

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.64  E-value=0.0002  Score=52.46  Aligned_cols=111  Identities=16%  Similarity=0.151  Sum_probs=67.7

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+|.|.|+ |.+|..++..|+.+|.  +++++++++++++....++.      ........   .|.   + . +.+.|+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~---~-~-l~~adi   72 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW---A-A-LADADV   72 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG---G-G-GTTCSE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCH---H-H-hccccE
Confidence            68999995 9999999999999884  79999999887544322111      11222221   222   2 2 467899


Q ss_pred             EEEcCcCCCcCCC-CCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          155 VICCTGTTAFPSR-RWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~-~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      ||-.||....... ......+..+.|..-.+.+.+.++ .+..-++.+-|
T Consensus        73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            9999997542211 111223455778888888887774 34344444433

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.63  E-value=3.4e-05  Score=58.58  Aligned_cols=111  Identities=15%  Similarity=0.085  Sum_probs=66.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC---C----eEEEEecCh--hhHhhhhCcC---CCCCeeEEEeeCCCccCcchhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN---I----KSRLLLRDP--EKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G---~----~V~~~~R~~--~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      -+|.||||+|.||.+++..|++.+   .    .+.+++.+.  +.++.+.-++   .......+..  +  .+..++ +.
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~--~--~~~~~~-~~   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G--IDPYEV-FE   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E--SCHHHH-TT
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc--c--ccchhh-cc
Confidence            479999999999999999998753   2    455555544  2233222111   1122222111  1  122333 68


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccC--C-CCeEEEEc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--S-LKRIVLVS  201 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~--~-~~~iV~iS  201 (250)
                      +.|+||-.||....+.+   ...+.++.|..-.+.+.+++.+  . ..+|+.+|
T Consensus       100 ~aDvVvi~ag~~rkpg~---tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRGPGM---ERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCCCCC---cHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            89999999998653332   3344557788888888888742  2 23455554

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.60  E-value=1.4e-05  Score=59.53  Aligned_cols=101  Identities=12%  Similarity=0.051  Sum_probs=61.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC---------eEEEEecChhhHhhhhCcC---CCCCeeEEEeeCCCccCcchhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI---------KSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~---------~V~~~~R~~~~~~~~~~~~---~~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      ++|.|+||+|.+|+.++..|+..+.         +++...++.++.+....+.   .......+...    ....++ +.
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~   79 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVA-FK   79 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHH-TT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhh-cc
Confidence            4899999999999999999998753         1222233444444332211   12233333332    222233 67


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP  191 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~  191 (250)
                      +.|+||..||....+.   .+..+.++.|+.-.+.+.+.+.
T Consensus        80 ~advViitaG~~~~pg---~~r~dl~~~N~~i~~~~~~~i~  117 (154)
T d1y7ta1          80 DADYALLVGAAPRKAG---MERRDLLQVNGKIFTEQGRALA  117 (154)
T ss_dssp             TCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccEEEeecCcCCCCC---CcHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999865322   2333455678888888888774

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.59  E-value=0.00024  Score=53.58  Aligned_cols=98  Identities=17%  Similarity=0.166  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-Ccchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-~~~~~~----~~~~D~  154 (250)
                      .+.+|+|.| +|+||...+..+...|+ .|+++++++++++..++ +   +...+ .|..+.+ ..+...    -+++|+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~---Ga~~~-i~~~~~~~~~~~~~~~~~~~G~d~  101 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-L---GATDC-LNPRELDKPVQDVITELTAGGVDY  101 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCSEE-ECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-h---CCCcc-cCCccchhhhhhhHhhhhcCCCcE
Confidence            567999997 59999999999999998 57888999888765443 2   22111 2332222 222111    358999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS  202 (250)
                      +|.++|...                  .....++.++.+.++++.++-
T Consensus       102 vie~~G~~~------------------~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2         102 SLDCAGTAQ------------------TLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             EEESSCCHH------------------HHHHHHHTBCTTTCEEEECCC
T ss_pred             EEEecccch------------------HHHHHHHHhhcCCeEEEecCC
Confidence            999998531                  112334445565578887764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.59  E-value=0.00014  Score=53.15  Aligned_cols=107  Identities=16%  Similarity=0.148  Sum_probs=66.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEecC--hhhHhhhhCcC----C-CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRD--PEKATTLFGKQ----D-EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~--~~~~~~~~~~~----~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      +|.|+||+|.+|..++..|+.+|.  ++++++.+  ++..+....++    . .....+...|   .   ++  +.+.|+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~---~~--~~~aDi   73 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---Y---ED--TAGSDV   73 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---G---GG--GTTCSE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---H---HH--hhhcCE
Confidence            789999999999999999999985  68888854  33332211111    0 2223332222   2   22  468899


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVS  201 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iS  201 (250)
                      ||..||....+.+   ...+.++.|..-.+.+.+.++ .+.+ .++.+|
T Consensus        74 VvitaG~~~~~g~---~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          74 VVITAGIPRQPGQ---TRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEecccccccCC---chhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            9999997543321   223455778888888888774 3433 444443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.58  E-value=9.9e-05  Score=54.69  Aligned_cols=115  Identities=16%  Similarity=0.134  Sum_probs=70.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      +.++|.|.|+ |.+|..++..|+..+. ++++++.++++++.....+.      ..... +.+    ..+.+++ +.+.|
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~----~~~~~~~-~~~ad   78 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRA----EYSYEAA-LTGAD   78 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEE----ECSHHHH-HTTCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-Eec----cCchhhh-hcCCC
Confidence            4578999997 9999999998888884 89999988876554322211      11111 111    1122333 57899


Q ss_pred             EEEEcCcCCCcCCCCC--CCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          154 HVICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       154 ~vi~~Ag~~~~~~~~~--~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      +|+..||....+...-  ....+..+.|..-...+++.++ .+..-++.+-|
T Consensus        79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999999876443211  1223345668888888888773 34444444443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.58  E-value=3.9e-05  Score=57.04  Aligned_cols=38  Identities=26%  Similarity=0.356  Sum_probs=34.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      |+|+|.|+ |.||..++..|++.|++|.+++|++++.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~   38 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS   38 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhh
Confidence            58999997 999999999999999999999998875544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.57  E-value=2.3e-05  Score=57.57  Aligned_cols=106  Identities=15%  Similarity=0.150  Sum_probs=66.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      +|.|.|+ |.+|.+++..|+.+|.  +++++++++++++....++.     .....+...     ++.+ . +.+.|+||
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~-----~~~~-~-~~daDvVV   74 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-----DDPE-I-CRDADMVV   74 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-----SCGG-G-GTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC-----CCHH-H-hhCCcEEE
Confidence            6888896 9999999999999985  79999999876544221111     112222111     2233 2 46789999


Q ss_pred             EcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEE
Q 025619          157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLV  200 (250)
Q Consensus       157 ~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~i  200 (250)
                      ..||....+.+   ...+..+.|..-.+.+.+.++ .+...++.+
T Consensus        75 itaG~~~~~g~---~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          75 ITAGPRQKPGQ---SRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             ECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             EecccccCCCC---chhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            99997653321   223345678877777777663 344334443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.56  E-value=8.6e-05  Score=55.75  Aligned_cols=67  Identities=19%  Similarity=0.278  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|+|+|.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.+.   ...  .+     ...   ....|+|||+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~---~~~--~~-----~~~---~~~~DliINaT   81 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG---YAY--IN-----SLE---NQQADILVNVT   81 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT---CEE--ES-----CCT---TCCCSEEEECS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh---hhh--hh-----ccc---ccchhhheecc
Confidence            4578999995 9999999999999997 79999999998887765431   111  11     111   24679999876


Q ss_pred             cC
Q 025619          160 GT  161 (250)
Q Consensus       160 g~  161 (250)
                      ..
T Consensus        82 pi   83 (167)
T d1npya1          82 SI   83 (167)
T ss_dssp             ST
T ss_pred             cc
Confidence            54

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.56  E-value=2e-05  Score=57.82  Aligned_cols=107  Identities=16%  Similarity=0.061  Sum_probs=65.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ++|.|+|| |.+|..++..|+..|  .+++++++++++++.....+.      .....+...  .|   .+ + +.+.|+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~---~~-~-~~dadv   72 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YA-D-TANSDI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GG-G-GTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC---HH-H-hcCCeE
Confidence            36888896 999999999999998  489999998876544321110      112222211  12   22 2 578899


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEE
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLV  200 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~i  200 (250)
                      +|.+||....+..   ...+..+.|..-...+.+.++ .+..-++.+
T Consensus        73 vvitag~~~~~g~---~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          73 VIITAGLPRKPGM---TREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             EEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             EEEEEecCCCCCC---chHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            9999997543321   222334567776777777663 333334433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.52  E-value=8.8e-05  Score=55.55  Aligned_cols=76  Identities=18%  Similarity=0.124  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~v  155 (250)
                      .+.+|+|.|++|++|..++..+...|. +|+++++++++.+.+.+.    +.+ ...|.++.+..++..    -+++|++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~----Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~v  101 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD-YVINASMQDPLAEIRRITESKGVDAV  101 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc----CCc-eeeccCCcCHHHHHHHHhhcccchhh
Confidence            457899999999999999998888885 899999999887765432    221 123444443333211    2368999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |.++|.
T Consensus       102 id~~g~  107 (170)
T d1jvba2         102 IDLNNS  107 (170)
T ss_dssp             EESCCC
T ss_pred             hccccc
Confidence            999874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=2.3e-05  Score=60.06  Aligned_cols=102  Identities=15%  Similarity=0.105  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeE-EEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKS-RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V-~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~~~~D~vi~  157 (250)
                      +++|||+||+|++|...++.....|+++ +.+++++++...+.+++.. .   ...|..+++..+.   ..-+++|+++.
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga-d---~vi~~~~~~~~~~~~~~~~~GvDvv~D  106 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF-D---AAVNYKTGNVAEQLREACPGGVDVYFD  106 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC-S---EEEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc-e---EEeeccchhHHHHHHHHhccCceEEEe
Confidence            4689999999999999999877789864 4456676665555443321 1   2346665443321   11347999999


Q ss_pred             cCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       158 ~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      +.|-.                   -....++.++. .+++|.+++.+.+.
T Consensus       107 ~vGg~-------------------~~~~~~~~l~~-~G~iv~~G~~s~~~  136 (187)
T d1vj1a2         107 NVGGD-------------------ISNTVISQMNE-NSHIILCGQISQYN  136 (187)
T ss_dssp             SSCHH-------------------HHHHHHTTEEE-EEEEEEC-------
T ss_pred             cCCch-------------------hHHHHhhhccc-cccEEEeccccccc
Confidence            88621                   01233444443 36888887766653

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.52  E-value=4e-05  Score=56.11  Aligned_cols=109  Identities=15%  Similarity=0.110  Sum_probs=65.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|.|+ |.+|..++..|+.++. ++++++.++++.+.....+.      .....+...     .+.++  +.+.|++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-----~d~~~--~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-----NNYAD--TANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SCGGG--GTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec-----CcHHH--hcCCCEE
Confidence            57889996 9999999999998874 89999988776544322111      111111111     22332  4678999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      |-+||....+..   ...+..+.|..-.+.+++.+. .+..-++.+.|
T Consensus        74 vitag~~~~~~~---~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          74 VVTSGAPRKPGM---SREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EECCSCC------------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEeeeccCCcCc---chhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999997653322   334455788888888888774 34444444433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.51  E-value=6.4e-05  Score=55.33  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=37.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      +..+|+|.|.||.|.+|..+++.|.++||+|.+.+|+.....+
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE   48 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccc
Confidence            4467899999999999999999999999999999998765443

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.50  E-value=4.6e-05  Score=54.63  Aligned_cols=70  Identities=20%  Similarity=0.258  Sum_probs=57.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |+++|.| -|-+|.++++.|  +|.+|++++.+++..+.+.    ..++.++.+|.+|++.++++-+.+.+.+|-+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVL----RSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            5788988 588999999998  4677888999988777654    34788999999999999876577899998754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.49  E-value=0.00033  Score=52.82  Aligned_cols=99  Identities=13%  Similarity=0.060  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~  154 (250)
                      .+.+|+|.|+ |++|...+..+...|+ +|+++++++++++...+.    +... ..|..|.+...+.+     -+++|+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~----GA~~-~in~~~~~~~~~~~~~~~~g~G~d~  102 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV----GATE-CISPKDSTKPISEVLSEMTGNNVGY  102 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH----TCSE-EECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc----CCcE-EECccccchHHHHHHHHhccccceE
Confidence            5679999985 9999999999999995 799999999998765432    1211 12433433322211     247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccC
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV  203 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~  203 (250)
                      +|.+.|...                  .....+..+..+.+++|.++..
T Consensus       103 vi~~~g~~~------------------~~~~a~~~~~~~~G~~v~vG~~  133 (176)
T d1d1ta2         103 TFEVIGHLE------------------TMIDALASCHMNYGTSVVVGVP  133 (176)
T ss_dssp             EEECSCCHH------------------HHHHHHTTSCTTTCEEEECSCC
T ss_pred             EEEeCCchH------------------HHHHHHHHhhcCCeEEEEEEcc
Confidence            999987531                  0112223334566788888754

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=0.0002  Score=53.57  Aligned_cols=76  Identities=16%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCee-EEEeeCCCccCcchhh---h-CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQ-VCKGDTRNPKDLDPAI---F-EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~---~-~~~D~  154 (250)
                      .+.+|+|.|+ |++|...+..+...|+ +|+++++++++++...+ +   +.+ ++..+-.+.....+.+   . .++|+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~---Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dv  100 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-I---GADLVLQISKESPQEIARKVEGQLGCKPEV  100 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCSEEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-h---CCcccccccccccccccccccccCCCCceE
Confidence            4568999986 9999999999989998 79999999998876543 2   222 2222222222222211   2 36899


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       101 vid~~G~  107 (171)
T d1pl8a2         101 TIECTGA  107 (171)
T ss_dssp             EEECSCC
T ss_pred             EEeccCC
Confidence            9999874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.47  E-value=0.00018  Score=54.14  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCcc-Ccchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~-~~~~~~----~~~~D~  154 (250)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+...+.    +... ..|..+.+ .+.+..    .+++|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~----Ga~~-~i~~~~~~~~~~~~~~~~~~~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GATE-CVNPQDYKKPIQEVLTEMSNGGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh----CCee-EEecCCchhHHHHHHHHHhcCCCCE
Confidence            5679999998 7899999999999985 799999999987765432    2221 12332322 222211    357999


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      +|.+.|..
T Consensus       102 vid~~G~~  109 (176)
T d2jhfa2         102 SFEVIGRL  109 (176)
T ss_dssp             EEECSCCH
T ss_pred             EEecCCch
Confidence            99998753

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.44  E-value=6.5e-05  Score=54.94  Aligned_cols=107  Identities=16%  Similarity=0.130  Sum_probs=62.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCCC-----CCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~-----~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|.|+ |.+|..++..|+.+|.  +++++++++++++....++.+     .......      .+.+ . +.+.|+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~------~~~~-~-~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA------GDYS-D-VKDCDVI   72 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--------CGG-G-GTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEee------CcHH-H-hCCCceE
Confidence            36888897 9999999999999875  799999988765433222211     1221111      1122 2 5788999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCC-eEEEEc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLK-RIVLVS  201 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~-~iV~iS  201 (250)
                      |..||....+.   ....+..+.|..-.+.+++.++ .+.+ .++.+|
T Consensus        73 vitag~~~~~~---~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          73 VVTAGANRKPG---ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEecccccCcC---cchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99999764322   1223344668877778887774 3433 344444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.43  E-value=0.00026  Score=51.44  Aligned_cols=107  Identities=17%  Similarity=0.165  Sum_probs=66.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChhhHhhhhCcCC-----CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~~~~~~~~~~~-----~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++|.|.|+ |.+|..++..|+.+|  .+++++++++++++....++.     .........   |   .+ + +.+.|+|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~---~~-~-~~~adiv   71 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---D---YA-D-LKGSDVV   71 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---C---GG-G-GTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---c---HH-H-hcCCCEE
Confidence            37888896 999999999999887  479999999876654321110     112222211   2   22 2 5778999


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVS  201 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iS  201 (250)
                      |.+||....+..   ...+....|..-.+.+.+.++ .+..-++.+-
T Consensus        72 vitag~~~~~g~---~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          72 IVAAGVPQKPGE---TRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             EECCCCCCCSSC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEecccccCCCc---chhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence            999997653321   222344667776777777663 3434344443

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.42  E-value=0.00044  Score=51.98  Aligned_cols=98  Identities=15%  Similarity=0.106  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCc-chhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL-DPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~-~~~~----~~~~D~  154 (250)
                      .+.+|+|.|+ |++|...+..+...|+ +|+++++++++++...+ +   +.+. ..|..+.+.. .+..    -+++|+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l---Ga~~-~i~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GATE-CLNPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TCSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c---CCcE-EEcCCCchhHHHHHHHHhcCCCCcE
Confidence            5679999985 9999999999998997 68889999988876543 2   2221 1344443322 2211    247999


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS  202 (250)
                      +|-++|..                  ......+..+..+.++++.++-
T Consensus       101 vid~~g~~------------------~~~~~~~~~~~~~~G~~v~vG~  130 (174)
T d1p0fa2         101 AVECAGRI------------------ETMMNALQSTYCGSGVTVVLGL  130 (174)
T ss_dssp             EEECSCCH------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             EEEcCCCc------------------hHHHHHHHHHHHhcCceEEEEE
Confidence            99988742                  1223344455566677777764

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.40  E-value=0.00026  Score=52.62  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=35.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      |+|.|.| .|-+|..+++.|.+.|++|++.+|+++..+...+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence            3688887 5999999999999999999999999988776543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.39  E-value=0.00029  Score=51.33  Aligned_cols=109  Identities=13%  Similarity=0.120  Sum_probs=67.6

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      |+|.|.|+ |.+|..++..|+.+|.  +++++++++++++....++.      .....+...     .+.+ . +.+.|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~-----~d~~-~-~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-----ADYS-L-LKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-----SCGG-G-GTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC-----CCHH-H-hccccE
Confidence            47888896 9999999999998884  69999999877554321111      111122211     1222 2 578899


Q ss_pred             EEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHcc-CCCCeEEEEcc
Q 025619          155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS  202 (250)
Q Consensus       155 vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~-~~~~~iV~iSS  202 (250)
                      ||-.||....+..   ...+....|..-...+.+.++ .+..-++.+-|
T Consensus        73 Vvitag~~~~~g~---~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          73 IVVTAGLARKPGM---TRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEECCCCCCCSSC---CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEeccccCCCCC---chHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            9999997653322   223344667777777777763 34444444444

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.38  E-value=3.5e-05  Score=58.44  Aligned_cols=76  Identities=24%  Similarity=0.260  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---CCC-eeEEEeeCCCccCcchhhhCCCcE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EET-LQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---~~~-~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      ++++|+|+|.| +||.+++++..|.+.| +|.++.|+.++.+++.+.+.   ... ...  .++   +++... ....|+
T Consensus        15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~--~~~---~~~~~~-~~~~dl   86 (177)
T d1nvta1          15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEE--VKF---SGLDVD-LDGVDI   86 (177)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHH--EEE---ECTTCC-CTTCCE
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhh--hhh---hhhhhc-cchhhh
Confidence            46889999998 5899999999998777 99999999999887654321   111 111  121   222221 356899


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      +||+....
T Consensus        87 iIn~tp~g   94 (177)
T d1nvta1          87 IINATPIG   94 (177)
T ss_dssp             EEECSCTT
T ss_pred             hccCCccc
Confidence            99987654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.0003  Score=47.28  Aligned_cols=74  Identities=18%  Similarity=0.253  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++++|+|+|.|. |..|.++++.|.++|++|++.+.+.....  .+.+ .........+.      ....+.++|.||-.
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~-~~~~~~~~~~~------~~~~~~~~d~vi~S   71 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKL-PEAVERHTGSL------NDEWLMAADLIVAS   71 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGS-CTTSCEEESBC------CHHHHHHCSEEEEC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHH-hhccceeeccc------chhhhccCCEEEEC
Confidence            578999999997 88999999999999999999998654211  1111 12333333322      11225678999998


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      -|+.
T Consensus        72 PGi~   75 (93)
T d2jfga1          72 PGIA   75 (93)
T ss_dssp             TTSC
T ss_pred             CCCC
Confidence            8764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.36  E-value=0.00018  Score=53.02  Aligned_cols=111  Identities=14%  Similarity=0.192  Sum_probs=68.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .+|-|.|+ |.+|..++..|+.++. +++++++++++++....++.      .....+...|  +   .+ . +.+.|+|
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~---~~-~-~~~advv   75 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T---YD-D-LAGADVV   75 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C---GG-G-GTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c---cc-c-cCCCcEE
Confidence            47889995 9999999988888774 79999998876554322211      1122222211  1   22 2 4678999


Q ss_pred             EEcCcCCCcCCCCCC--CCCCcceehHHHHHHHHHHcc-CCCCe-EEEEc
Q 025619          156 ICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALP-SSLKR-IVLVS  201 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~--~~~~~~~~N~~g~~~l~~a~~-~~~~~-iV~iS  201 (250)
                      |.+||....+.....  ...+..+.|..-.+.+.+.++ .+..- ++++|
T Consensus        76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999998764432211  123345678888888888774 34344 44444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00012  Score=53.64  Aligned_cols=70  Identities=14%  Similarity=0.179  Sum_probs=42.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC----CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G----~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ||+|.|.||||.+|+.+++.|+++.    .++++..++..........  ...  ....++.+     ...+.++|++|.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~--~~~--~~~~~~~~-----~~~~~~~DivF~   71 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG--GTT--GTLQDAFD-----LEALKALDIIVT   71 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG--TCC--CBCEETTC-----HHHHHTCSEEEE
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc--CCc--eeeecccc-----hhhhhcCcEEEE
Confidence            5789999999999999999888763    2566666654322211100  111  11122222     112578999999


Q ss_pred             cCc
Q 025619          158 CTG  160 (250)
Q Consensus       158 ~Ag  160 (250)
                      +++
T Consensus        72 a~~   74 (146)
T d1t4ba1          72 CQG   74 (146)
T ss_dssp             CSC
T ss_pred             ecC
Confidence            874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.24  E-value=0.00065  Score=52.36  Aligned_cols=70  Identities=16%  Similarity=0.129  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +++||+|.|-| -|.+|.++++.|.+.|++|++.+.+.++.......    +.+.     -+   .++.+..++|+++-|
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~----g~~~-----~~---~~~~~~~~~DI~iPc   90 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL----GHTA-----VA---LEDVLSTPCDVFAPC   90 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCEE-----CC---GGGGGGCCCSEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh----cccc-----cC---ccccccccceeeecc
Confidence            57999999998 89999999999999999999999998877654321    2221     11   222323478999988


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      |..
T Consensus        91 A~~   93 (201)
T d1c1da1          91 AMG   93 (201)
T ss_dssp             SCS
T ss_pred             ccc
Confidence            754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.22  E-value=0.0024  Score=47.77  Aligned_cols=72  Identities=10%  Similarity=0.126  Sum_probs=50.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      ++|-+.| -|-+|..+++.|++.|++|++.+|++++.+++.+........  . -..+.+++.+. ....|.++.+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~--~-~a~~~~~~~~~-~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV--L-GAHSLEEMVSK-LKKPRRIILLV   74 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC--E-ECSSHHHHHHH-BCSSCEEEECS
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccc--c-chhhhhhhhhh-hcccceEEEec
Confidence            4688888 599999999999999999999999999988875432111110  1 12233344432 56788888775

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.22  E-value=0.00013  Score=55.07  Aligned_cols=74  Identities=22%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh---h--CCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~---~--~~~D~  154 (250)
                      .+.+|+|.|+ |+||...++.+...|+ +|+++++++++.+...+ +   +.. ...|..+.+..+ .+   .  .++|+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-l---Ga~-~~i~~~~~~~~~-~v~~~t~g~G~D~   99 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-Y---GAT-DILNYKNGHIED-QVMKLTNGKGVDR   99 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-H---TCS-EEECGGGSCHHH-HHHHHTTTSCEEE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-h---Ccc-ccccccchhHHH-HHHHHhhccCcce
Confidence            4668999985 9999999998888897 69999999988766543 2   121 123444433222 22   2  35999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.++|.
T Consensus       100 vid~~g~  106 (174)
T d1jqba2         100 VIMAGGG  106 (174)
T ss_dssp             EEECSSC
T ss_pred             EEEccCC
Confidence            9999985

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.19  E-value=0.00044  Score=51.71  Aligned_cols=75  Identities=17%  Similarity=0.140  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc-cCcchhh----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~~~~~~----~~~~D~  154 (250)
                      .+.+|+|.|+ ||+|...++.+...|+ .|+++++++++.+..++ +.   ... ..|..+. +.+.+.+    -+++|+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~-lG---a~~-~i~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FG---ATE-CINPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HT---CSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH-hC---CcE-EEeCCchhhHHHHHHHHHcCCCCcE
Confidence            4679999997 6899999998888996 57777788877665442 21   111 1233322 2333221    357999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999874

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.19  E-value=0.00068  Score=49.90  Aligned_cols=100  Identities=16%  Similarity=0.062  Sum_probs=61.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC-------eEEEEecCh--hhHhhhhCc---CCCCCeeEEEeeCCCccCcchhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~-------~V~~~~R~~--~~~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      .+|.|+||+|.+|++++..|+..+.       .+++.+.+.  ++++.+..+   ........+..  ++  +..++ +.
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~--~~~~~-~~   78 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TD--KEEIA-FK   78 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ES--CHHHH-TT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Cc--ccccc-cC
Confidence            3899999999999999999987542       355555443  233332211   11122222222  11  12222 67


Q ss_pred             CCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc
Q 025619          151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL  190 (250)
Q Consensus       151 ~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~  190 (250)
                      +.|+||-.||....+   .....+.++.|..-.+.+.+.+
T Consensus        79 ~~dvVVitag~~~~~---g~sr~dll~~N~~i~k~~~~~i  115 (154)
T d5mdha1          79 DLDVAILVGSMPRRD---GMERKDLLKANVKIFKCQGAAL  115 (154)
T ss_dssp             TCSEEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecccCCCC---CCchhHHHHHhHHHHHHHHHHH
Confidence            899999999976533   2344456688888888888877

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.18  E-value=0.00049  Score=51.63  Aligned_cols=75  Identities=12%  Similarity=0.068  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcch---hhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~---~~~~~~D~vi  156 (250)
                      .+.+|+|.|+ |+||...+..+...|++ |+++++++++++.+++. .  -.++  .|..+++..++   ..-+++|++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~-G--a~~~--i~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-G--ATHV--INSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-T--CSEE--EETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc-C--CeEE--EeCCCcCHHHHHHHHcCCCCcEEE
Confidence            4678999987 99999999888888986 55667888887765432 1  1122  45555433332   1124799999


Q ss_pred             EcCcC
Q 025619          157 CCTGT  161 (250)
Q Consensus       157 ~~Ag~  161 (250)
                      .+.|.
T Consensus       102 d~~G~  106 (174)
T d1f8fa2         102 ESTGS  106 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCc
Confidence            99874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.17  E-value=0.0011  Score=45.90  Aligned_cols=71  Identities=17%  Similarity=0.161  Sum_probs=50.0

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++|+|+|.| +|-+|..-++.|++.|++|++++..... ...+.+   ..++++..-+..+ +     .+.+.+.|+.
T Consensus         9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---~~~i~~~~~~~~~-~-----dl~~~~lv~~   78 (113)
T d1pjqa1           9 QLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---EGMLTLVEGPFDE-T-----LLDSCWLAIA   78 (113)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---TTSCEEEESSCCG-G-----GGTTCSEEEE
T ss_pred             EeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---cCCceeeccCCCH-H-----HhCCCcEEee
Confidence            57899999999 5889999999999999999999876532 222222   3456666544432 1     2456788876


Q ss_pred             cC
Q 025619          158 CT  159 (250)
Q Consensus       158 ~A  159 (250)
                      +.
T Consensus        79 at   80 (113)
T d1pjqa1          79 AT   80 (113)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.14  E-value=0.00033  Score=52.04  Aligned_cols=74  Identities=15%  Similarity=0.162  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchh--hhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~--~~~~~D~vi~~  158 (250)
                      .+.+|+|.|+ |+||...+..+...|++|+++++++++++...+.    +.. ...|.++.+..++.  ...+.|.+|-+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~----Ga~-~~i~~~~~~~~~~~~~~~~g~~~~i~~  100 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKL----GAS-LTVNARQEDPVEAIQRDIGGAHGVLVT  100 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TCS-EEEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhcc----Ccc-ccccccchhHHHHHHHhhcCCcccccc
Confidence            4678999886 9999999988888899999999999888765432    221 12455555444321  13455555555


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      ++
T Consensus       101 ~~  102 (166)
T d1llua2         101 AV  102 (166)
T ss_dssp             CS
T ss_pred             cc
Confidence            44

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.12  E-value=8.6e-05  Score=56.77  Aligned_cols=105  Identities=18%  Similarity=0.262  Sum_probs=60.7

Q ss_pred             CCCEEEE-EcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCe-eEEEeeCCCccCcchhh-------hCC
Q 025619           81 SSKLVLV-AGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAI-------FEG  151 (250)
Q Consensus        81 ~~k~vlV-TGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~v~~Dl~d~~~~~~~~-------~~~  151 (250)
                      .+.+++| +||+|++|...++-....|++|+++.|+.++.++..+.+..-+. +++..|-.+..++.+.+       -++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence            3455555 69999999999988778899999999876654433221111122 22322211222222111       246


Q ss_pred             CcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcc
Q 025619          152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV  205 (250)
Q Consensus       152 ~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~  205 (250)
                      +|+++.+.|..                   .....++.++.+ +++|.++....
T Consensus       108 vdvv~D~vg~~-------------------~~~~~~~~l~~~-G~~v~~G~~~~  141 (189)
T d1gu7a2         108 AKLALNCVGGK-------------------SSTGIARKLNNN-GLMLTYGGMSF  141 (189)
T ss_dssp             EEEEEESSCHH-------------------HHHHHHHTSCTT-CEEEECCCCSS
T ss_pred             ceEEEECCCcc-------------------hhhhhhhhhcCC-cEEEEECCccC
Confidence            99999987621                   112345555554 68888876543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.11  E-value=8.3e-05  Score=57.05  Aligned_cols=77  Identities=16%  Similarity=0.241  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCC----CCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE----ETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      +.|++|.|.| +|..|.+++..|++.|++|.+.+|+++..+.+.+.-.+    +++.. .-++.-..+++++ +.+.|+|
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a-~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKA-YNGAEII   81 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHH-HTTCSCE
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhc-cCCCCEE
Confidence            4567899999 68899999999999999999999999887766432111    12111 1111112334443 5677888


Q ss_pred             EEcC
Q 025619          156 ICCT  159 (250)
Q Consensus       156 i~~A  159 (250)
                      |.+.
T Consensus        82 iiav   85 (189)
T d1n1ea2          82 LFVI   85 (189)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            8754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00058  Score=52.23  Aligned_cols=42  Identities=19%  Similarity=0.137  Sum_probs=36.7

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL  122 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~  122 (250)
                      |+-|+|.|.|| |-+|+.+|..++..|++|++.+++++.++..
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            34579999997 9999999999999999999999998765543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.93  E-value=0.0021  Score=47.63  Aligned_cols=42  Identities=24%  Similarity=0.214  Sum_probs=35.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecChhhHhhhhC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFG  124 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~~~~~~~~~  124 (250)
                      ||+|+|.| .|-||..+++.|.+.|+  +|++.+|+++..+...+
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            46899998 69999999999999996  68889999988776543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.90  E-value=0.00077  Score=50.33  Aligned_cols=74  Identities=22%  Similarity=0.205  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~v  155 (250)
                      .+.+|+|.|+ |++|...+..+...|+ +|+++++++++++...+.  . ..++  .|..+ +.+++..    -.++|++
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~--g-a~~~--i~~~~-~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL--G-ADHV--VDARR-DPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT--T-CSEE--EETTS-CHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc--c-ccee--ecCcc-cHHHHHHHhhCCCCceEE
Confidence            4678999885 9999999998887886 677788998887765532  1 1223  34332 2222211    2369999


Q ss_pred             EEcCcC
Q 025619          156 ICCTGT  161 (250)
Q Consensus       156 i~~Ag~  161 (250)
                      |.++|.
T Consensus       105 id~~g~  110 (172)
T d1h2ba2         105 MDFVGS  110 (172)
T ss_dssp             EESSCC
T ss_pred             EEecCc
Confidence            999874

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0011  Score=46.10  Aligned_cols=70  Identities=13%  Similarity=0.108  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhh-CCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-~~~D~vi~  157 (250)
                      .+.+|.|.| +|.+|+.++....+.|+++++++.+++......      .-+++.+|..|.+.+.+... .++|+|-.
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v------a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV------AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG------SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc------CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            456899999 799999999999999999999998876433211      12567899999999886533 36898853

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.83  E-value=0.0017  Score=49.56  Aligned_cols=75  Identities=19%  Similarity=0.147  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~  154 (250)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++++...+.    +...+ .|-.+ +++.+.+     -.++|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~----Ga~~~-~~~~~-~~~~~~i~~~t~g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GFEIA-DLSLD-TPLHEQIAALLGEPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCEEE-ETTSS-SCHHHHHHHHHSSSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc----cccEE-EeCCC-cCHHHHHHHHhCCCCcEE
Confidence            4679999985 9999888888777787 788899999887765432    33322 23223 3332222     236999


Q ss_pred             EEEcCcCC
Q 025619          155 VICCTGTT  162 (250)
Q Consensus       155 vi~~Ag~~  162 (250)
                      +|.+.|..
T Consensus        98 vid~vG~~  105 (195)
T d1kola2          98 AVDAVGFE  105 (195)
T ss_dssp             EEECCCTT
T ss_pred             EEECcccc
Confidence            99998843

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.79  E-value=0.0012  Score=48.29  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=36.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGK  125 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~  125 (250)
                      |+|.+.|+ |-+|.++++.|++.| ++|.+.+|++++.+.+.++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            36778875 999999999999887 8999999999988887654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.79  E-value=0.0018  Score=50.76  Aligned_cols=73  Identities=12%  Similarity=0.084  Sum_probs=54.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++++|+|+|-| -|-+|.++++.|.+.|++|++.+.+....+......   +..     ..+.+++.   ..+||+++-|
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~---g~~-----~~~~~~~~---~~~cDIl~Pc  103 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE---GAD-----AVAPNAIY---GVTCDIFAPC  103 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CCE-----ECCGGGTT---TCCCSEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc---CCc-----ccCCcccc---cccccEeccc
Confidence            57899999998 799999999999999999999999988776654332   111     12333322   3478999999


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      |....
T Consensus       104 A~~~~  108 (230)
T d1leha1         104 ALGAV  108 (230)
T ss_dssp             SCSCC
T ss_pred             ccccc
Confidence            86543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.72  E-value=0.00076  Score=49.86  Aligned_cols=43  Identities=19%  Similarity=0.173  Sum_probs=36.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      .+.+|+|.|+ |+||...++.+...|++|+++++++++++.+++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            4678999875 999999999888899999999999998876653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.68  E-value=0.0012  Score=48.83  Aligned_cols=41  Identities=17%  Similarity=0.170  Sum_probs=36.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF  123 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~  123 (250)
                      |++|.+.| .|-+|+++++.|+++|++|.+.+|++++.+.+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            46788887 799999999999999999999999998877654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0028  Score=46.87  Aligned_cols=39  Identities=26%  Similarity=0.307  Sum_probs=36.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~  118 (250)
                      .+.||+++|.| .|-||+.+|+.+...|++|+++.++|-+
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch
Confidence            57899999999 8999999999999999999999999854

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.64  E-value=0.0015  Score=47.80  Aligned_cols=65  Identities=12%  Similarity=0.100  Sum_probs=47.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      |+|.+.| +|-+|+++++.|.+.|++|++.+|++++.+++.++..   +.+       ..+.++. ..+.|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g---~~~-------~~~~~~~-~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA---LPY-------AMSHQDL-IDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT---CCB-------CSSHHHH-HHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc---eee-------echhhhh-hhccceeeeec
Confidence            3577776 8999999999999999999999999998887754431   111       1233333 46789888775

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.56  E-value=0.0016  Score=49.00  Aligned_cols=75  Identities=13%  Similarity=0.246  Sum_probs=47.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh--hHhhhhCcCCCCC--eeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQDEET--LQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~--~~~~~~~~~~~~~--~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      |+|.|.| +|..|.+++..|++.|++|.+.+|+.+  ..+.+.+.-..+.  ...-..++.-.++++++ +.+.|+||.+
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~ad~Ii~a   78 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC-LENAEVVLLG   78 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH-HTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHH-Hhccchhhcc
Confidence            4788999 599999999999999999999998543  3444432211111  11111122223445544 6788999886


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      .
T Consensus        79 v   79 (180)
T d1txga2          79 V   79 (180)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=96.54  E-value=0.002  Score=46.98  Aligned_cols=33  Identities=18%  Similarity=0.295  Sum_probs=25.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC----CeEEEEecC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRD  115 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G----~~V~~~~R~  115 (250)
                      ++|.|.||||.+|+++++.|+++.    .++..++.+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~   37 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS   37 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence            479999999999999999888653    355555443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.46  E-value=0.0019  Score=46.90  Aligned_cols=34  Identities=32%  Similarity=0.446  Sum_probs=27.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCC---eEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~---~V~~~~R~~  116 (250)
                      ++|.|.||||.+|+++++.|.++++   ++..++.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            3799999999999999999986653   576665443

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.42  E-value=0.0029  Score=47.19  Aligned_cols=83  Identities=14%  Similarity=-0.037  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeC--CCccCcchhhhCCCcEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT--RNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl--~d~~~~~~~~~~~~D~vi  156 (250)
                      ++.||+++|.|-|.=+|+-++..|+++|+.|..+..+............  -......|+  ...+.+++. ....|+||
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lk~~-~~~aDIvI  102 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK--LNKHHVEDLGEYSEDLLKKC-SLDSDVVI  102 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS--CCCCEEEEEEECCHHHHHHH-HHHCSEEE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccccee--eeeeccccccccchhHHhhc-cccCCEEE
Confidence            5799999999999999999999999999999988765321100000000  001112222  122334432 45689999


Q ss_pred             EcCcCCCc
Q 025619          157 CCTGTTAF  164 (250)
Q Consensus       157 ~~Ag~~~~  164 (250)
                      ..+|...+
T Consensus       103 savG~p~~  110 (171)
T d1edza1         103 TGVPSENY  110 (171)
T ss_dssp             ECCCCTTC
T ss_pred             EccCCCcc
Confidence            99887553

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.37  E-value=0.0015  Score=49.46  Aligned_cols=38  Identities=16%  Similarity=0.065  Sum_probs=34.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT  121 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~  121 (250)
                      |+|.|.|| |-||+.++..++..|++|++.+++++.++.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            57999997 999999999999999999999999876554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.37  E-value=0.0024  Score=47.05  Aligned_cols=41  Identities=22%  Similarity=0.242  Sum_probs=36.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      |+|-|.| .|-+|+.+++.|+++|++|++.+|++++.+++.+
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            3678887 6999999999999999999999999998887654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.37  E-value=0.0017  Score=48.61  Aligned_cols=41  Identities=20%  Similarity=0.239  Sum_probs=36.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK  125 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~  125 (250)
                      +|-|.| .|-+|..+++.|++.|++|.+.+|++++.+++.++
T Consensus         3 kIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           3 DVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            577776 89999999999999999999999999998877554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.36  E-value=0.0019  Score=47.00  Aligned_cols=36  Identities=31%  Similarity=0.426  Sum_probs=32.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      .+++|+|||.|| |.+|..-++.|++.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999997 889999999999999999999653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.32  E-value=0.0014  Score=50.00  Aligned_cols=38  Identities=16%  Similarity=0.063  Sum_probs=34.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .+.||++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            57899999998 799999999999999999999988643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.29  E-value=0.0078  Score=45.24  Aligned_cols=65  Identities=22%  Similarity=0.301  Sum_probs=49.1

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      +.+.+|+|.|.| .|.||+.+++.+...|.+|++.+|.+....                 ..-.+++++ ++...|+|+.
T Consensus        38 ~~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----------------~~~~~~l~e-ll~~sDiv~~   98 (181)
T d1qp8a1          38 PLIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP-----------------WRFTNSLEE-ALREARAAVC   98 (181)
T ss_dssp             CCCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS-----------------SCCBSCSHH-HHTTCSEEEE
T ss_pred             CcccCceEEEec-cccccccceeeeeccccccccccccccccc-----------------eeeeechhh-hhhccchhhc
Confidence            357899999999 688999999999999999999998753211                 011235665 4788999998


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      +.-.
T Consensus        99 ~~pl  102 (181)
T d1qp8a1          99 ALPL  102 (181)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            7643

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.27  E-value=0.0069  Score=44.82  Aligned_cols=75  Identities=17%  Similarity=0.124  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-----hCCCcE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTH  154 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-----~~~~D~  154 (250)
                      .+.+|+|.|+ |++|...+..+...|. +|+++++++++++...+.    +... ..|..+.+...+..     -+++|+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~----GAd~-~in~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GATD-FVNPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCCE-EECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc----CCcE-EEcCCCcchhHHHHHHhhccCCcce
Confidence            5678999985 7788888888888876 688899999888765532    2211 23444443332111     247999


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      ++.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999874

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.16  E-value=0.0038  Score=47.68  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=36.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      |+|.|.| .|++|..++..|++.|++|++++.++++.+.+.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            3678885 8999999999999999999999999998887653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.99  E-value=0.0037  Score=47.75  Aligned_cols=66  Identities=14%  Similarity=0.059  Sum_probs=46.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.| .|.||+.+++.|..-|.+|++.++.........      .        ...+++++. +...|+|+.+
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~------~--------~~~~~l~~~-l~~sDii~~~  103 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKK------G--------YYVDSLDDL-YKQADVISLH  103 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT------T--------CBCSCHHHH-HHHCSEEEEC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccccc------e--------eeecccccc-cccccccccc
Confidence            57899999999 899999999999999999999987654322210      1        112345543 5667777766


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .-
T Consensus       104 ~p  105 (197)
T d1j4aa1         104 VP  105 (197)
T ss_dssp             SC
T ss_pred             CC
Confidence            53

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.99  E-value=0.0065  Score=49.10  Aligned_cols=35  Identities=23%  Similarity=0.137  Sum_probs=31.8

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R  114 (250)
                      ++++|+|+|-| .|-+|.++++.|.+.|++|+.++.
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            57899999999 699999999999999999988863

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.91  E-value=0.0077  Score=45.03  Aligned_cols=31  Identities=23%  Similarity=0.265  Sum_probs=25.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC-CCeEEEE
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLL  112 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~  112 (250)
                      |++|.|.||||++|.++++.|.++ ..++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            468999999999999999999987 4566544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.91  E-value=0.0055  Score=45.41  Aligned_cols=108  Identities=14%  Similarity=0.059  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ...+|+|.| .|-.|.+-++...+.|++|.+++.+.++++.+..... ..++   .-..+.+.+++. +.+.|+||.++-
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-~~~~---~~~~~~~~l~~~-~~~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVE---LLYSNSAEIETA-VAEADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSE---EEECCHHHHHHH-HHTCSEEEECCC
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-ccce---eehhhhhhHHHh-hccCcEEEEeee
Confidence            456899999 5999999999999999999999999999887754432 2232   233455666654 688999999987


Q ss_pred             CCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCcccc
Q 025619          161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK  207 (250)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~~  207 (250)
                      +....     . ..+.      +..+++.+++| .-||=++...+-.
T Consensus       105 ipG~~-----a-P~lI------t~~mv~~Mk~G-SVIVDvaidqGG~  138 (168)
T d1pjca1         105 VPGRR-----A-PILV------PASLVEQMRTG-SVIVDVAVDQGGC  138 (168)
T ss_dssp             CTTSS-----C-CCCB------CHHHHTTSCTT-CEEEETTCTTCCS
T ss_pred             cCCcc-----c-Ceee------cHHHHhhcCCC-cEEEEeecCCCCc
Confidence            65421     1 1111      45667777765 3567666655543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=95.89  E-value=0.0068  Score=45.61  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=25.5

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC-CeEEEEe
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLL  113 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~  113 (250)
                      .+|.|.||||+.|.++++.|.++- .++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            479999999999999999998874 3665554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.84  E-value=0.0064  Score=46.12  Aligned_cols=39  Identities=13%  Similarity=0.145  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        78 ~~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      ..+.+|++.|.| .|.||+.+++.+...|.+|...++...
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            357899999998 799999999999999999999987543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.78  E-value=0.019  Score=38.32  Aligned_cols=70  Identities=16%  Similarity=0.194  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCChHH-HHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG-~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      +.|+|.+.| -||+| +++|+.|.++|++|...++.... .+.+.+    .++.+..++-  ++    . ..+.|.||..
T Consensus         7 ~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----~Gi~v~~g~~--~~----~-i~~~d~vV~S   74 (96)
T d1p3da1           7 RVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ----AGAKIYIGHA--EE----H-IEGASVVVVS   74 (96)
T ss_dssp             TCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----TTCEEEESCC--GG----G-GTTCSEEEEC
T ss_pred             hCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----CCCeEEECCc--cc----c-CCCCCEEEEC
Confidence            567899998 46666 67899999999999999987432 233332    2454433321  11    2 3567999988


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      .++.
T Consensus        75 ~AI~   78 (96)
T d1p3da1          75 SAIK   78 (96)
T ss_dssp             TTSC
T ss_pred             CCcC
Confidence            7764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.71  E-value=0.027  Score=41.57  Aligned_cols=102  Identities=14%  Similarity=0.073  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC---------------CCCeeEEEeeCCCccCcc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---------------EETLQVCKGDTRNPKDLD  145 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~---------------~~~~~~v~~Dl~d~~~~~  145 (250)
                      .+++||..|+..|   ..+..|+++|++|++++.+++.++...+..+               .....++.+|..+.....
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            5679999997665   4666888999999999999877665543221               233456677765533222


Q ss_pred             hhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEE
Q 025619          146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVL  199 (250)
Q Consensus       146 ~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~  199 (250)
                         ....|.|+........+.          +.......++.+.++.| ++++.
T Consensus        97 ---~~~~D~i~~~~~l~~l~~----------~~~~~~~~~i~~~Lkpg-G~l~l  136 (201)
T d1pjza_          97 ---IGHCAAFYDRAAMIALPA----------DMRERYVQHLEALMPQA-CSGLL  136 (201)
T ss_dssp             ---HHSEEEEEEESCGGGSCH----------HHHHHHHHHHHHHSCSE-EEEEE
T ss_pred             ---ccceeEEEEEeeeEecch----------hhhHHHHHHHHHhcCCC-cEEEE
Confidence               346787776544332110          11223345566666766 44443

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.66  E-value=0.0096  Score=41.53  Aligned_cols=35  Identities=20%  Similarity=0.388  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .|+++|.| +|++|.++|..|.++|.+|.++.+.+.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            46899988 699999999999999999999998754

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.55  E-value=0.013  Score=40.97  Aligned_cols=35  Identities=20%  Similarity=0.160  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .+|+|+|.| +|++|.++|..|.+.|.+|+++.|.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            457899987 69999999999999999999998864

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.049  Score=40.19  Aligned_cols=79  Identities=14%  Similarity=0.063  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ++.||+|.|.|.+.-+|+-++..|+++|++|..+......+.+...     +.+++..-.-.++-++...+ +.+++|-.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~~-----~aDivi~a~G~~~~i~~~~v-k~g~iviD  109 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVN-----KGDILVVATGQPEMVKGEWI-KPGAIVID  109 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHT-----TCSEEEECCCCTTCBCGGGS-CTTCEEEE
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHHh-----hccchhhccccccccccccc-cCCCeEec
Confidence            5789999999999999999999999999999999876655444321     22333333344444554322 33444445


Q ss_pred             CcCCC
Q 025619          159 TGTTA  163 (250)
Q Consensus       159 Ag~~~  163 (250)
                      +|...
T Consensus       110 vgi~~  114 (170)
T d1a4ia1         110 CGINY  114 (170)
T ss_dssp             CCCBC
T ss_pred             cCccc
Confidence            56543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.48  E-value=0.006  Score=46.13  Aligned_cols=67  Identities=10%  Similarity=0.002  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.++++.|.| .|.||+.+++.+...|.+|+..++.......        ..    ..   .+++++. +...|+|+.+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~----~~---~~~l~el-l~~sDii~i~  103 (188)
T d1sc6a1          41 EARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG--------NA----TQ---VQHLSDL-LNMSDVVSLH  103 (188)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT--------TC----EE---CSCHHHH-HHHCSEEEEC
T ss_pred             cccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh--------hh----hh---hhhHHHH-Hhhccceeec
Confidence            57899999997 8999999999999999999999886432110        11    01   1345543 6778888877


Q ss_pred             CcCC
Q 025619          159 TGTT  162 (250)
Q Consensus       159 Ag~~  162 (250)
                      +...
T Consensus       104 ~plt  107 (188)
T d1sc6a1         104 VPEN  107 (188)
T ss_dssp             CCSS
T ss_pred             ccCC
Confidence            6443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.40  E-value=0.0081  Score=43.84  Aligned_cols=24  Identities=29%  Similarity=0.497  Sum_probs=21.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI  107 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~  107 (250)
                      +|.|.||||++|.++++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999888864

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.28  E-value=0.0069  Score=45.35  Aligned_cols=34  Identities=21%  Similarity=0.125  Sum_probs=26.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEecC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRD  115 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R~  115 (250)
                      |.+|.|.||||.+|.++++.|.++- .++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            4589999999999999999998864 466655433

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.23  E-value=0.014  Score=40.22  Aligned_cols=34  Identities=24%  Similarity=0.248  Sum_probs=30.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      |+++|.| +|.||.++|..|.+.|.+|+++.|.+.
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            6899999 599999999999999999999988654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.19  E-value=0.017  Score=44.43  Aligned_cols=35  Identities=34%  Similarity=0.405  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      ..|+|+|.| +|-.|..+|.+|+++|++|+++.|+.
T Consensus         5 ~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            346899999 59999999999999999999999853

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.046  Score=42.00  Aligned_cols=77  Identities=8%  Similarity=-0.055  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--------------------CCCCeeEEEeeCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------------------DEETLQVCKGDTRN  140 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--------------------~~~~~~~v~~Dl~d  140 (250)
                      .+++||..|+..|   ..+..|+++|++|++++-+++.++...+..                    ...+++++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            4579999997665   457778999999999999987765543211                    12356777777765


Q ss_pred             ccCcchhhhCCCcEEEEcCcCCC
Q 025619          141 PKDLDPAIFEGVTHVICCTGTTA  163 (250)
Q Consensus       141 ~~~~~~~~~~~~D~vi~~Ag~~~  163 (250)
                      .....   .+..|+|+-.....+
T Consensus       122 l~~~~---~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         122 LPRTN---IGKFDMIWDRGALVA  141 (229)
T ss_dssp             GGGSC---CCCEEEEEESSSTTT
T ss_pred             ccccc---cCceeEEEEEEEEEe
Confidence            44322   245788877665543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.16  E-value=0.031  Score=36.71  Aligned_cols=68  Identities=13%  Similarity=0.081  Sum_probs=44.7

Q ss_pred             CEEEEEcCCChHH-HHHHHHHHHCCCeEEEEecChhh-HhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG-~~la~~L~~~G~~V~~~~R~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|.+.| -||+| +++|+.|.++|++|...++.... .+.+.    ..++.+..+  -+.+.+     .+.|.||...+
T Consensus         2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~----~~Gi~i~~g--h~~~~i-----~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR----KLGIPIFVP--HSADNW-----YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH----HTTCCEESS--CCTTSC-----CCCSEEEECTT
T ss_pred             cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH----HCCCeEEee--eccccc-----CCCCEEEEecC
Confidence            4677776 67777 47899999999999999987633 22232    234544332  222223     45799998887


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      +.
T Consensus        70 I~   71 (89)
T d1j6ua1          70 VR   71 (89)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.13  E-value=0.024  Score=39.96  Aligned_cols=70  Identities=17%  Similarity=0.077  Sum_probs=48.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEE-ecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~-~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi~  157 (250)
                      ++|.|.|++|-+|+.+++.+.++|+++++. +++..  +.    +...+   +..|++.++.+.+.+    -.++-+|+=
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~----~~~~D---VvIDFS~p~~~~~~l~~~~~~~~p~ViG   71 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EE----LDSPD---VVIDFSSPEALPKTVDLCKKYRAGLVLG   71 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EE----CSCCS---EEEECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HH----hccCC---EEEEecCHHHHHHHHHHHHhcCCCEEEE
Confidence            479999999999999999999999987654 44321  11    11233   467999999877643    236677775


Q ss_pred             cCcC
Q 025619          158 CTGT  161 (250)
Q Consensus       158 ~Ag~  161 (250)
                      ..|.
T Consensus        72 TTG~   75 (128)
T d1vm6a3          72 TTAL   75 (128)
T ss_dssp             CCSC
T ss_pred             cCCC
Confidence            5554

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.09  E-value=0.025  Score=42.25  Aligned_cols=105  Identities=11%  Similarity=-0.009  Sum_probs=65.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCc---------------------
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---------------------  141 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~---------------------  141 (250)
                      -+|+|.| .|-.|.+-++.....|++|.+++.++++++++.+..    ..++..+..+.                     
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~----~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~  104 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG----GKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ  104 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT----CEECCC-----------------------CCH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh----cceEEEeccccccccccccchhhcCHHHHHHH
Confidence            4899999 599999999999999999999999998887765432    11221111111                     


Q ss_pred             -cCcchhhhCCCcEEEEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHccCCCCeEEEEccCccc
Q 025619          142 -KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVT  206 (250)
Q Consensus       142 -~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS~~~~  206 (250)
                       +.+.+. +.+.|+||-.+-+....     .+. +.      +..+++.+++| .-||=++...+-
T Consensus       105 ~~~l~~~-l~~aDlVI~talipG~~-----aP~-li------t~~mv~~Mk~G-SVIVDvaidqGG  156 (183)
T d1l7da1         105 AEAVLKE-LVKTDIAITTALIPGKP-----APV-LI------TEEMVTKMKPG-SVIIDLAVEAGG  156 (183)
T ss_dssp             HHHHHHH-HTTCSEEEECCCCTTSC-----CCC-CS------CHHHHTTSCTT-CEEEETTGGGTC
T ss_pred             HHHHHHH-HHhhhhheeeeecCCcc-----cce-ee------hHHHHHhcCCC-cEEEEEeecCCC
Confidence             112221 56899999988765421     111 11      34566677665 356666655443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.08  E-value=0.017  Score=43.29  Aligned_cols=39  Identities=23%  Similarity=0.111  Sum_probs=34.4

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK  118 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~  118 (250)
                      .+.+|++.|.| .|.||+++++.+..-|.+|+..++...+
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            56889999988 7999999999999999999999987544

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.07  E-value=0.014  Score=40.59  Aligned_cols=33  Identities=18%  Similarity=0.332  Sum_probs=30.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.+|.++|..|.+.|.+|+++.|.+
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            5889988 69999999999999999999998865

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0075  Score=51.53  Aligned_cols=34  Identities=26%  Similarity=0.398  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      ++.+|||.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            4568999996 8899999999999998 79988875

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.98  E-value=0.017  Score=40.25  Aligned_cols=33  Identities=18%  Similarity=0.192  Sum_probs=30.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.||.++|..|.+.|.+|.++.|++
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            6899999 69999999999999999999998865

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.017  Score=39.76  Aligned_cols=33  Identities=21%  Similarity=0.180  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            5888888 69999999999999999999999865

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.95  E-value=0.0087  Score=40.76  Aligned_cols=38  Identities=16%  Similarity=-0.007  Sum_probs=31.9

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .+++|+|+|.| +|--|..++..|++.+.+++...|+..
T Consensus        29 ~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            57899999999 578999999999998888777777653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.89  E-value=0.016  Score=43.62  Aligned_cols=37  Identities=16%  Similarity=0.151  Sum_probs=33.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .+.++++.|.| .|.||+++++.|...|.+|...+|..
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            57889999998 79999999999999999999999854

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.018  Score=40.19  Aligned_cols=33  Identities=18%  Similarity=0.290  Sum_probs=30.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.||.++|..|.+.|.+|+++.|.+
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            6899999 58999999999999999999999864

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.89  E-value=0.067  Score=37.86  Aligned_cols=73  Identities=21%  Similarity=0.221  Sum_probs=47.5

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh----hCCCcEEEEc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVICC  158 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~----~~~~D~vi~~  158 (250)
                      +|.|.|++|-+|+++++.+.+. +++++......+.+......  ..+   +..|++.++.+.+.+    -.++-.|+=.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~~~~~ViGT   75 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDG--NTE---VVIDFTHPDVVMGNLEFLIDNGIHAVVGT   75 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTT--TCS---EEEECCCTTTHHHHHHHHHHTTCEEEECC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccc--cCC---EEEEcccHHHHHHHHHHHHhcCCCEEEec
Confidence            6899999999999999988765 57766543332333322211  222   568999999877543    2467777754


Q ss_pred             CcC
Q 025619          159 TGT  161 (250)
Q Consensus       159 Ag~  161 (250)
                      .|.
T Consensus        76 TG~   78 (135)
T d1yl7a1          76 TGF   78 (135)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.85  E-value=0.055  Score=39.72  Aligned_cols=41  Identities=20%  Similarity=0.152  Sum_probs=35.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~  119 (250)
                      ++.||+|+|.|.+.-+|+-++..|.++|++|+.+......+
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            47899999999999999999999999999999886654433

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.84  E-value=0.018  Score=39.82  Aligned_cols=33  Identities=21%  Similarity=0.288  Sum_probs=30.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|+|.| +|.||.++|..|.+.|.+|+++.|..
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            6899998 59999999999999999999999854

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.83  E-value=0.022  Score=39.39  Aligned_cols=34  Identities=15%  Similarity=0.062  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .++++|.| +|.||.++|..|.+.|.+|+++.|..
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            36899999 69999999999999999999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.74  E-value=0.023  Score=40.11  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .|+++|.| +|.+|.++|..|.+.|.+|.++.+.+.
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            57899998 699999999999999999999988653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.70  E-value=0.017  Score=45.13  Aligned_cols=34  Identities=21%  Similarity=0.235  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      +|+|+|.| +|.-|...|.+|+++|++|+++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            58999998 69999999999999999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.65  E-value=0.026  Score=42.10  Aligned_cols=37  Identities=22%  Similarity=0.245  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      ..+.|+|+|.| +|-.|.+.|..|+++|++|+++.+++
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            34678999999 69999999999999999999999865

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.58  E-value=0.021  Score=39.69  Aligned_cols=32  Identities=19%  Similarity=0.216  Sum_probs=29.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      ++++|.| +|.||.++|..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            5788888 6999999999999999999999886

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.52  E-value=0.033  Score=38.25  Aligned_cols=36  Identities=14%  Similarity=0.155  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .+|+++|.| +|.||.++|..|.+.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            467899988 699999999999999999999998653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.43  E-value=0.022  Score=39.06  Aligned_cols=33  Identities=12%  Similarity=0.158  Sum_probs=29.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.+|.++|..|.+.|.+|+++.|.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            6888887 69999999999999999999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.38  E-value=0.025  Score=40.73  Aligned_cols=65  Identities=22%  Similarity=0.164  Sum_probs=43.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      ++|-|.| .|-+|+.+++.|+++|++|++.+|++++.......    +..+  .     ++..++ ...+|+||.+.-
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~--~-----~~~~e~-~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR----TVGV--T-----ETSEED-VYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH----HHTC--E-----ECCHHH-HHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh----cccc--c-----ccHHHH-HhhcCeEEEEec
Confidence            3677776 69999999999999999999988876554433211    1111  1     123333 567898888753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.32  E-value=0.037  Score=35.30  Aligned_cols=52  Identities=23%  Similarity=0.233  Sum_probs=39.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN  140 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d  140 (250)
                      +|+|.|.| +|.+|+.++.+-.+.|+++++++-+++......      ...++..++.+
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~------a~dvIT~e~E~   52 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF------QQSVITAEIER   52 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG------GGSEEEESSSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCccccc------ccceEEEeecc
Confidence            47899999 699999999999999999999987765432211      23456666665

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.32  E-value=0.023  Score=42.13  Aligned_cols=35  Identities=11%  Similarity=0.101  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~~  117 (250)
                      +|+|+|.| +|-.|...|..|.++|++ |+++.|+..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            47899999 699999999999999995 999988653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.24  E-value=0.065  Score=39.11  Aligned_cols=40  Identities=28%  Similarity=0.336  Sum_probs=36.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhH
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA  119 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~  119 (250)
                      .+.||+++|.| =|.+|+-+|+.|...|++|+++..+|-+.
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a   59 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA   59 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh
Confidence            57899999999 79999999999999999999999998553

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.24  E-value=0.032  Score=41.89  Aligned_cols=40  Identities=28%  Similarity=0.217  Sum_probs=33.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      |+|.|.| .|++|..++..| ++|++|++++-++++.+.+..
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence            4678886 899999999766 579999999999998877653

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.07  E-value=0.34  Score=33.64  Aligned_cols=90  Identities=16%  Similarity=0.093  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcCC---ChHHHHHHHHHHHCC-CeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGS---GGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGas---G~IG~~la~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      ++-|.|.|.|||   +..|..+.+.|.+.| ++|+.+..+.+...         +..       -..++.+. -+.+|.+
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~---------G~~-------~y~sl~dl-p~~vDlv   68 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ---------GVK-------AYKSVKDI-PDEIDLA   68 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET---------TEE-------CBSSTTSC-SSCCSEE
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC---------CeE-------eecchhhc-CCCCceE
Confidence            456799999999   899999999987766 57887755432211         111       12233321 2468988


Q ss_pred             EEcCcCCCcCCCCCCCCCCcceehHHHHHHHHHHc-cCCCCeEEEEccCcc
Q 025619          156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGV  205 (250)
Q Consensus       156 i~~Ag~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~-~~~~~~iV~iSS~~~  205 (250)
                      +-+...                   ..+..+++.+ +.|.+.++.+|+...
T Consensus        69 vi~vp~-------------------~~~~~~~~~~~~~g~~~~vi~s~Gf~  100 (129)
T d2csua1          69 IIVVPK-------------------RFVKDTLIQCGEKGVKGVVIITAGFG  100 (129)
T ss_dssp             EECSCH-------------------HHHHHHHHHHHHHTCCEEEECCCSST
T ss_pred             EEecCh-------------------HHhHHHHHHHHHcCCCEEEEeccccc
Confidence            865421                   2233455544 678888888887544

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.97  E-value=0.026  Score=44.18  Aligned_cols=31  Identities=23%  Similarity=0.338  Sum_probs=28.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|-+|..+|.+|+++|.+|+++.++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88888 69999999999999999999999864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.89  E-value=0.022  Score=39.67  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=30.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      |+++|.| +|.||.++|..|.+.|.+|+++.|.+.
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            6899998 699999999999999999999988654

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.76  E-value=0.04  Score=44.68  Aligned_cols=35  Identities=20%  Similarity=0.352  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .|+|+|.| +|.-|..+|..|+++|++|.++.++..
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            57999999 699999999999999999999987653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.74  E-value=0.038  Score=39.98  Aligned_cols=35  Identities=17%  Similarity=0.249  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC--eEEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~--~V~~~~R~~  116 (250)
                      .||+|+|.| +|.+|.+++..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999 59999999999999885  688887765

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.72  E-value=0.034  Score=38.80  Aligned_cols=34  Identities=12%  Similarity=0.091  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .++++|.| +|.||.++|..|.+.|.+|+++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            36899999 69999999999999999999998864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.61  E-value=0.047  Score=42.14  Aligned_cols=35  Identities=17%  Similarity=0.252  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .++|+|.| +|-.|..+|..|+++|++|+++.|+++
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            45899999 599999999999999999999998653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.52  E-value=0.055  Score=38.87  Aligned_cols=36  Identities=8%  Similarity=0.001  Sum_probs=29.5

Q ss_pred             CCEEEEE-cCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVA-GGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVT-GasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      ++.++|. .++|+||.++|..|+++|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3455554 46799999999999999999999988753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.40  E-value=0.092  Score=39.62  Aligned_cols=69  Identities=13%  Similarity=0.065  Sum_probs=49.1

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++.||+||=.|+..|+   ++..++..|+ +|++++.+++.++...+.  ..+++++.+|+.+.       -+++|+||-
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N--~~~~~~~~~D~~~l-------~~~fD~Vi~  113 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN--CGGVNFMVADVSEI-------SGKYDTWIM  113 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH--CTTSEEEECCGGGC-------CCCEEEEEE
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc--cccccEEEEehhhc-------CCcceEEEe
Confidence            5689999999966552   2334666775 699999998877655433  34678888887542       257899998


Q ss_pred             cC
Q 025619          158 CT  159 (250)
Q Consensus       158 ~A  159 (250)
                      |-
T Consensus       114 NP  115 (197)
T d1ne2a_         114 NP  115 (197)
T ss_dssp             CC
T ss_pred             Cc
Confidence            84

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.19  E-value=0.043  Score=41.56  Aligned_cols=65  Identities=17%  Similarity=0.166  Sum_probs=46.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+.+|+|.|.| .|.||+.+++.|..-|.+|++.++...+..       .....        ..++++ ++..+|+|+.+
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~--------~~~l~~-l~~~~D~v~~~  104 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD-------HPDFD--------YVSLED-LFKQSDVIDLH  104 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC-------CTTCE--------ECCHHH-HHHHCSEEEEC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCccchhh-------hcchh--------HHHHHH-HHHhcccceee
Confidence            57889999999 799999999999999999999998654311       11111        123554 35677888776


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .-
T Consensus       105 ~p  106 (199)
T d1dxya1         105 VP  106 (199)
T ss_dssp             CC
T ss_pred             ec
Confidence            53

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.08  E-value=0.062  Score=38.80  Aligned_cols=45  Identities=11%  Similarity=0.200  Sum_probs=33.0

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEe--cChhhHhhhhCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLL--RDPEKATTLFGKQ  126 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~--R~~~~~~~~~~~~  126 (250)
                      ||+|.|.|+||.||....+-+.+.  .++|++++  ++.+.+.+...++
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            578999999999999999887775  46777663  5555555544433

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.92  E-value=0.095  Score=37.75  Aligned_cols=45  Identities=16%  Similarity=0.250  Sum_probs=33.3

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHC--CCeEEEEe--cChhhHhhhhCcC
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLL--RDPEKATTLFGKQ  126 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~--G~~V~~~~--R~~~~~~~~~~~~  126 (250)
                      .|+|.|.|+||.||....+-+.+.  .++|++++  ++.+.+.+...++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence            479999999999999998888765  47777664  5556665554444

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.81  E-value=0.098  Score=40.06  Aligned_cols=36  Identities=19%  Similarity=0.264  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      ...|+|+|.| +|..|...|.+|+++|++|+++.++.
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            4678999999 59999999999999999999998764

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.79  E-value=0.13  Score=39.06  Aligned_cols=78  Identities=14%  Similarity=0.110  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+.+||-.|+..|--.++..++...+.+|+.++.+++..+...+.   ....++.++.+|..+.  .. . .+..|+|+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~--~~-~-~~~fD~I~~  150 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG--VP-E-FSPYDVIFV  150 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--CG-G-GCCEEEEEE
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc--cc-c-ccchhhhhh
Confidence            466899888766655555555566677899999998766554332   2234666777665431  22 1 356899998


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +++..
T Consensus       151 ~~~~~  155 (213)
T d1dl5a1         151 TVGVD  155 (213)
T ss_dssp             CSBBS
T ss_pred             hccHH
Confidence            87654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.47  E-value=0.064  Score=41.72  Aligned_cols=35  Identities=31%  Similarity=0.367  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      ++.++|+|.| .||+|.+++..|++.|. ++++++.+
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4557999999 79999999999999997 68888764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.39  E-value=0.04  Score=48.16  Aligned_cols=34  Identities=15%  Similarity=0.194  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD  115 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~  115 (250)
                      +..+|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            4458999995 8999999999999996 68888764

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.38  E-value=0.02  Score=42.44  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=45.7

Q ss_pred             CEEEEEcCCChHHHH--HHHHHHHC----CCeEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhC
Q 025619           83 KLVLVAGGSGGVGQL--VVASLLSR----NIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~~--la~~L~~~----G~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      ++|.|.|| |.+|..  ++..++..    +.+++++++++++++.......      .....+     ....+.+++ +.
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i-----~~~td~~ea-L~   75 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKF-----EKTMNLDDV-II   75 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEE-----EEESCHHHH-HT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEE-----EEeCChhhc-cc
Confidence            47889996 877754  44445543    4589999999987765322110      122222     122334444 68


Q ss_pred             CCcEEEEcCcCCC
Q 025619          151 GVTHVICCTGTTA  163 (250)
Q Consensus       151 ~~D~vi~~Ag~~~  163 (250)
                      +.|+|++.++...
T Consensus        76 dad~Vv~~~~~g~   88 (171)
T d1obba1          76 DADFVINTAMVGG   88 (171)
T ss_dssp             TCSEEEECCCTTH
T ss_pred             CCCeEeeeccccc
Confidence            8999999987653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.37  E-value=0.064  Score=42.38  Aligned_cols=35  Identities=20%  Similarity=0.243  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      ..|+|+|.| +|-.|...|..|+++|++|+++.+++
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            447999999 68999999999999999999998754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.26  E-value=0.028  Score=40.30  Aligned_cols=37  Identities=22%  Similarity=0.292  Sum_probs=26.7

Q ss_pred             CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC
Q 025619           90 GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ  126 (250)
Q Consensus        90 asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~  126 (250)
                      |+|-+|+++++.|.+.++.+.+.+|++++++.+.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            3899999999987654444468899999988876543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.26  E-value=0.061  Score=41.68  Aligned_cols=32  Identities=38%  Similarity=0.389  Sum_probs=28.6

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      +|+|.|| |--|...|.+|+++|++|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            6889995 9999999999999999999998753

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.13  E-value=0.19  Score=37.28  Aligned_cols=75  Identities=12%  Similarity=-0.001  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ...+||=.|+.  .|. .+..|+++|++|++++.+++.++.+...   ..-..+++...|+.+..-     -+..|+|+.
T Consensus        30 ~~grvLDiGcG--~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----~~~fD~I~~  101 (198)
T d2i6ga1          30 APGRTLDLGCG--NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----DGEYDFILS  101 (198)
T ss_dssp             CSCEEEEETCT--TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----CCCEEEEEE
T ss_pred             CCCcEEEECCC--CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----cccccEEEE
Confidence            34589999974  454 4567889999999999998766654322   112346666666655431     245799987


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +.-..+
T Consensus       102 ~~~~~~  107 (198)
T d2i6ga1         102 TVVMMF  107 (198)
T ss_dssp             ESCGGG
T ss_pred             eeeeec
Confidence            665443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.10  E-value=0.061  Score=41.82  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=29.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHH-CCCeEEEEe
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLL  113 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~-~G~~V~~~~  113 (250)
                      ++++++|.|-| .|-+|+++++.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            46889999987 89999999999975 599988776

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.02  E-value=0.11  Score=40.38  Aligned_cols=35  Identities=23%  Similarity=0.203  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R  114 (250)
                      ++++|+|+|-| -|-+|.++++.|.+.|++|+.++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            47899999998 899999999999999999988764

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.94  E-value=0.067  Score=40.69  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCChHHHH-----HHHHHHHCCCeEEEEecC
Q 025619           81 SSKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~R~  115 (250)
                      |+|+|.|+|+-||+|+.     ++..|+++|.+|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            57889999999999974     667778899999999865

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.88  E-value=0.39  Score=38.33  Aligned_cols=72  Identities=18%  Similarity=0.099  Sum_probs=47.8

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHhhh---hCcCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~---~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .++|+||-.|++.|+   ++..++++|+ +|++++.++......   .+.....++.++.+|+.+...-    ...+|+|
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~----~~~~D~I  106 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLP----VEKVDVI  106 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS----CSCEEEE
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCc----cccceEE
Confidence            468899999977664   4556677886 699999886532211   1111145788899998775422    2468999


Q ss_pred             EEc
Q 025619          156 ICC  158 (250)
Q Consensus       156 i~~  158 (250)
                      +..
T Consensus       107 vse  109 (311)
T d2fyta1         107 ISE  109 (311)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            874

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.84  E-value=0.24  Score=36.14  Aligned_cols=74  Identities=23%  Similarity=0.284  Sum_probs=43.7

Q ss_pred             CEEEEEcCCChHHH-HHHHHHHHC-----CCeEEEEecChhhHhhhhCcCC------CCCeeEEEeeCCCccCcchhhhC
Q 025619           83 KLVLVAGGSGGVGQ-LVVASLLSR-----NIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFE  150 (250)
Q Consensus        83 k~vlVTGasG~IG~-~la~~L~~~-----G~~V~~~~R~~~~~~~~~~~~~------~~~~~~v~~Dl~d~~~~~~~~~~  150 (250)
                      .+|.|.||++ +|. .++..++.+     +.++++++.++++++.....+.      .....+...     .+.+++ ++
T Consensus         4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~ea-l~   76 (167)
T d1u8xx1           4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEA-FT   76 (167)
T ss_dssp             EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHH-HS
T ss_pred             ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhc-cC
Confidence            3688888754 443 344455543     2479999999988764322111      112222211     234444 68


Q ss_pred             CCcEEEEcCcCCC
Q 025619          151 GVTHVICCTGTTA  163 (250)
Q Consensus       151 ~~D~vi~~Ag~~~  163 (250)
                      +.|+||+.||...
T Consensus        77 ~AD~Vvitag~~~   89 (167)
T d1u8xx1          77 DVDFVMAHIRVGK   89 (167)
T ss_dssp             SCSEEEECCCTTH
T ss_pred             CCCEEEECCCcCC
Confidence            8999999999754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.83  E-value=0.084  Score=39.52  Aligned_cols=31  Identities=19%  Similarity=0.175  Sum_probs=28.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|--|...|..|+++|++|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78888 79999999999999999999998864

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.82  E-value=0.034  Score=40.76  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=25.2

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL  112 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~  112 (250)
                      .+|.|.|++|-+|+++++.+.+. +.+++..
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~   35 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAA   35 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            37999999999999999999876 6676544

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.73  E-value=0.17  Score=38.29  Aligned_cols=76  Identities=12%  Similarity=0.075  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCChHH-HHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG-~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .|.+||=.|++.|.- .++++ +...| +|++++.+++.++.+.+... ..++.++..|..++...... +..+|+++|.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~-~v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~-~~~vd~v~~~  132 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLAD-IVDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI-VEKVDLIYQD  132 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHH-HTTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT-CCCEEEEEEC
T ss_pred             CCCEEEEeCCcCCHHHHHHHH-hccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccc-cceEEEEEec
Confidence            467899999766543 44444 44445 89999999987766543221 45788899999887766643 5678888875


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      .
T Consensus       133 ~  133 (209)
T d1nt2a_         133 I  133 (209)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.26  E-value=0.015  Score=42.63  Aligned_cols=74  Identities=18%  Similarity=0.108  Sum_probs=43.5

Q ss_pred             CEEEEEcCCChHHHHHHHH-HHHC-----CCeEEEEecChhhHhhhhCcCC---CCCeeEEEeeCCCccCcchhhhCCCc
Q 025619           83 KLVLVAGGSGGVGQLVVAS-LLSR-----NIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGVT  153 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~-L~~~-----G~~V~~~~R~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~~~~~~~~~~D  153 (250)
                      ++|.|.|| |.+|...+-. +++.     +.++++++.++++++...+...   .....+   .++  .+..++ +.+.|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~---~~t--~~~~~~-l~~aD   73 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV---LIS--DTFEGA-VVDAK   73 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE---EEC--SSHHHH-HTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE---EEe--cCcccc-cCCCC
Confidence            36889997 4466555432 3221     3589999999988765432111   122222   112  122333 68899


Q ss_pred             EEEEcCcCCC
Q 025619          154 HVICCTGTTA  163 (250)
Q Consensus       154 ~vi~~Ag~~~  163 (250)
                      +||..||...
T Consensus        74 vVVita~~~~   83 (162)
T d1up7a1          74 YVIFQFRPGG   83 (162)
T ss_dssp             EEEECCCTTH
T ss_pred             EEEEecccCC
Confidence            9999999754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.23  E-value=0.31  Score=36.63  Aligned_cols=76  Identities=13%  Similarity=0.096  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC---cCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+++||=.|++.|.-   +..|+++|.+|++++-+++-++...+   ....++++++.+|..+.. +.   -+..|+|+.
T Consensus        15 ~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~---~~~fD~v~~   87 (231)
T d1vl5a_          15 GNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FT---DERFHIVTC   87 (231)
T ss_dssp             SCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SC---TTCEEEEEE
T ss_pred             CcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-cc---ccccccccc
Confidence            356899999776643   35678889999999999876544322   223467889999987743 22   256899988


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +....+
T Consensus        88 ~~~l~~   93 (231)
T d1vl5a_          88 RIAAHH   93 (231)
T ss_dssp             ESCGGG
T ss_pred             cccccc
Confidence            766554

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.14  E-value=0.11  Score=40.81  Aligned_cols=35  Identities=26%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEec
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR  114 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R  114 (250)
                      ++++|+|.|.| .|-+|.++++.|.+.|++|+.++.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            57899999999 799999999999999999988753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.12  E-value=0.37  Score=35.87  Aligned_cols=73  Identities=14%  Similarity=0.005  Sum_probs=50.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+||=.|++.|.   ++..|++.|++|++++.+++.++..++..  ....+..+.+|..+.. ..   -+..|+|+....
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-~~---~~~fD~I~~~~~  111 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FE---DKTFDYVIFIDS  111 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SC---TTCEEEEEEESC
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc-cc---CcCceEEEEecc
Confidence            479999977765   56678889999999999987665543321  1345677778877643 11   246799887755


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus       112 l~  113 (226)
T d1ve3a1         112 IV  113 (226)
T ss_dssp             GG
T ss_pred             hh
Confidence            43

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.12  E-value=0.1  Score=37.84  Aligned_cols=34  Identities=21%  Similarity=0.277  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      ++++|+|.| +|.+|.+++..|.+.|++|.++.+.
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence            356899988 6999999999999999876555443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.00  E-value=0.11  Score=39.93  Aligned_cols=72  Identities=13%  Similarity=0.034  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+++||=.|++.|.   ++..|+++|.+|++++.+++-++.+.+..  .+.+++++.+|+.+.+.     -+..|+|+..
T Consensus        37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~i~~~  108 (246)
T d1y8ca_          37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----NRKFDLITCC  108 (246)
T ss_dssp             CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----SCCEEEEEEC
T ss_pred             CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----ccccccccee
Confidence            45789999977664   67788899999999999987665543321  13468888888876431     2468999865


Q ss_pred             Cc
Q 025619          159 TG  160 (250)
Q Consensus       159 Ag  160 (250)
                      .+
T Consensus       109 ~~  110 (246)
T d1y8ca_         109 LD  110 (246)
T ss_dssp             TT
T ss_pred             ee
Confidence            43

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.95  E-value=0.042  Score=38.50  Aligned_cols=75  Identities=15%  Similarity=0.062  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-h
Q 025619           81 SSKLVLVAGGSG----------GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-F  149 (250)
Q Consensus        81 ~~k~vlVTGasG----------~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~  149 (250)
                      .-|+|||.|+..          +-+.+.+++|.+.|++++++.-|++....-.+.  ..++-   .+--..+++.+.+ .
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~lY---fePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADATY---IEPIHWEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSEEE---CSCCCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cceee---eecCCHHHHHHHHHH
Confidence            457999999843          678899999999999999999998865432111  12222   2222334444322 4


Q ss_pred             CCCcEEEEcCc
Q 025619          150 EGVTHVICCTG  160 (250)
Q Consensus       150 ~~~D~vi~~Ag  160 (250)
                      .++|.|+-..|
T Consensus        81 E~pd~il~~~G   91 (127)
T d1a9xa3          81 ERPDAVLPTMG   91 (127)
T ss_dssp             HCCSEEECSSS
T ss_pred             hCcCCeEEEee
Confidence            58999987655

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.95  E-value=0.29  Score=37.20  Aligned_cols=77  Identities=16%  Similarity=0.221  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhh---CcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF---GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~---~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+.+||..|+.+|=-.++..+++  |.+|+.+.++++-.+...   +...-.++.++.+|..+-  ...  .+..|.++-
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g--~~~--~~pfD~Iiv  151 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG--FPP--KAPYDVIIV  151 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--CGG--GCCEEEEEE
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC--Ccc--cCcceeEEe
Confidence            45689988877666666666666  567999999976444332   233356888999987542  221  357899998


Q ss_pred             cCcCCC
Q 025619          158 CTGTTA  163 (250)
Q Consensus       158 ~Ag~~~  163 (250)
                      +++...
T Consensus       152 ~~a~~~  157 (215)
T d1jg1a_         152 TAGAPK  157 (215)
T ss_dssp             CSBBSS
T ss_pred             eccccc
Confidence            887654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=90.71  E-value=0.11  Score=40.74  Aligned_cols=37  Identities=24%  Similarity=0.411  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCChHHHHH-----HHHHHHCCCeEEEEecChh
Q 025619           81 SSKLVLVAGGSGGVGQLV-----VASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~l-----a~~L~~~G~~V~~~~R~~~  117 (250)
                      .+++|+|+.|-||+|+-+     +..|+++|++|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            456788888899999865     7888999999999999864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.68  E-value=0.12  Score=40.32  Aligned_cols=31  Identities=26%  Similarity=0.341  Sum_probs=27.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            78888 69999999999999999999998753

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.54  E-value=0.087  Score=39.96  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCChHHH-----HHHHHHHHCCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQ-----LVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~-----~la~~L~~~G~~V~~~~R~~  116 (250)
                      ||+|.|+++-||+|+     ++|..|+++|.+|.+++-++
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999999999996     45677888999999998764

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=90.48  E-value=0.079  Score=41.47  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCChHHHH-----HHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~R~~~  117 (250)
                      ||+|.|+| -||+|+-     ++..|++.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            57899998 9999975     45588899999999998864

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.36  E-value=0.12  Score=40.75  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=28.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      .|+|.| +|-+|..+|.+|+++|. +|+++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            488888 58999999999999996 699998863

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.28  E-value=0.2  Score=39.09  Aligned_cols=34  Identities=26%  Similarity=0.291  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      +.++|+|.| +|--|...|.+|.++|++|+++-++
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345799999 6999999999999999999998654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.14  E-value=0.41  Score=36.44  Aligned_cols=79  Identities=13%  Similarity=0.045  Sum_probs=55.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--------CCCCeeEEEeeCCCccCcchhhhCCC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------DEETLQVCKGDTRNPKDLDPAIFEGV  152 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--------~~~~~~~v~~Dl~d~~~~~~~~~~~~  152 (250)
                      .|.+||-.|+..|--.++..+++....+|+.++++++-++...+.+        ...++.++.+|..+.  ...  .+..
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~--~~~--~~~f  151 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG--YAE--EAPY  151 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC--CGG--GCCE
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc--cch--hhhh
Confidence            4679999998888888887778888889999999987655432211        124567777776432  221  3568


Q ss_pred             cEEEEcCcCCC
Q 025619          153 THVICCTGTTA  163 (250)
Q Consensus       153 D~vi~~Ag~~~  163 (250)
                      |+|+.+++...
T Consensus       152 D~I~~~~~~~~  162 (224)
T d1i1na_         152 DAIHVGAAAPV  162 (224)
T ss_dssp             EEEEECSBBSS
T ss_pred             hhhhhhcchhh
Confidence            99999887543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=90.02  E-value=0.19  Score=34.17  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=26.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~R~~  116 (250)
                      .++++|.|| |.+|.++|..|.+   +|.+|+++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            368999996 9999999966554   456899998864

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=89.91  E-value=0.45  Score=36.33  Aligned_cols=75  Identities=11%  Similarity=-0.040  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC-CCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .+.+||-.|+..|--.+   .|++.+.+|+.+.++++..+...+.. ...++.++.+|..+  ...+  .+..|+|+.++
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~--g~~~--~~pfD~Iiv~~  142 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL--GYEE--EKPYDRVVVWA  142 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG--CCGG--GCCEEEEEESS
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhh--cchh--hhhHHHHHhhc
Confidence            45689999977664333   45555678999999987655443322 14578888888654  2222  35689999888


Q ss_pred             cCC
Q 025619          160 GTT  162 (250)
Q Consensus       160 g~~  162 (250)
                      +..
T Consensus       143 a~~  145 (224)
T d1vbfa_         143 TAP  145 (224)
T ss_dssp             BBS
T ss_pred             chh
Confidence            754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=89.83  E-value=0.052  Score=39.49  Aligned_cols=34  Identities=21%  Similarity=0.291  Sum_probs=22.9

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH-C-CCeEEEE-ecChh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLS-R-NIKSRLL-LRDPE  117 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~-~-G~~V~~~-~R~~~  117 (250)
                      .+|.|.| +|+||..+...+++ . ..+++++ +|+++
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            3799999 99999875444444 3 3466665 67654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.58  E-value=0.099  Score=39.06  Aligned_cols=31  Identities=16%  Similarity=0.204  Sum_probs=26.6

Q ss_pred             CEEEEEcCCChHHH-----HHHHHHHHCCCeEEEEe
Q 025619           83 KLVLVAGGSGGVGQ-----LVVASLLSRNIKSRLLL  113 (250)
Q Consensus        83 k~vlVTGasG~IG~-----~la~~L~~~G~~V~~~~  113 (250)
                      |+++|||-..|+|+     .|++.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999997669997     57788889999999986

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.48  E-value=0.14  Score=40.10  Aligned_cols=33  Identities=27%  Similarity=0.343  Sum_probs=29.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      .|+|.|| |-.|..+|..|.++|++|+++.|+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999995 69999999999999999999998764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.23  Score=39.52  Aligned_cols=32  Identities=28%  Similarity=0.439  Sum_probs=23.6

Q ss_pred             CEEEEEcCCChHHH-----HHHHHHHHCCCeEEEEecC
Q 025619           83 KLVLVAGGSGGVGQ-----LVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        83 k~vlVTGasG~IG~-----~la~~L~~~G~~V~~~~R~  115 (250)
                      |+|+|++|+.| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57888775324 54     5889999999999877643

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.41  Score=38.88  Aligned_cols=71  Identities=8%  Similarity=0.008  Sum_probs=47.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC---cCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+=.-+|+|.+|..++    +++.+|+++..+++..+.+..   ...-.+++++.+|+.+.-.........+|+||-.
T Consensus       216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilD  289 (358)
T d1uwva2         216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD  289 (358)
T ss_dssp             EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred             EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeC
Confidence            3345688899987764    567899999999877655432   2224578889998876433222223568999875

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.15  Score=40.60  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=29.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      ..|+|.| +|.-|..+|++|++.|++|.++.++.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4689999 69999999999999999999998764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=89.23  E-value=0.12  Score=38.67  Aligned_cols=78  Identities=15%  Similarity=0.152  Sum_probs=55.1

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhh-hCCCcEEEEcCc
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTG  160 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~Ag  160 (250)
                      .+=+|-|+||.-.++.+.+ . +.+|++++++++.++...+.+.  ..++.++.++..+...+.... .+.+|.|+.-.|
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~DlG  104 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDLG  104 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeeccc
Confidence            4446778888888888765 3 5789999999987766544332  457889999887755443221 357999999888


Q ss_pred             CCC
Q 025619          161 TTA  163 (250)
Q Consensus       161 ~~~  163 (250)
                      +..
T Consensus       105 vSs  107 (192)
T d1m6ya2         105 VST  107 (192)
T ss_dssp             CCH
T ss_pred             hhH
Confidence            753

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.82  E-value=0.49  Score=35.97  Aligned_cols=71  Identities=15%  Similarity=0.055  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      ..++||=.|++.|   .++..|+++|++|++++.+++-++...+..  .+.+++++.+|+++.. .    -+..|.|+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-~----~~~fD~I~~~  112 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-F----KNEFDAVTMF  112 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-C----CSCEEEEEEC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-c----ccccchHhhh
Confidence            3468999997665   445678899999999999987665543322  1346888999986643 1    2457988875


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      -
T Consensus       113 ~  113 (251)
T d1wzna1         113 F  113 (251)
T ss_dssp             S
T ss_pred             h
Confidence            3

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.80  E-value=0.79  Score=34.12  Aligned_cols=71  Identities=20%  Similarity=0.120  Sum_probs=47.0

Q ss_pred             CCCCCEEEEEcC-CChHHHHHHHHHHHCCC-eEEEEecChhhHhhhhCcCC--CCCeeEEEeeCCCccCcchhhhCCCcE
Q 025619           79 ASSSKLVLVAGG-SGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTH  154 (250)
Q Consensus        79 ~~~~k~vlVTGa-sG~IG~~la~~L~~~G~-~V~~~~R~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~~~~~~~~~~D~  154 (250)
                      +++|++||=.|+ +|.+|.+    ++.+|+ +|++++.+++.++.+.+.+.  ....+++.+|+.+.       .++.|+
T Consensus        44 dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------~~~fD~  112 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------NSRVDI  112 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------CCCCSE
T ss_pred             CCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------CCcCcE
Confidence            568899998885 4555543    446675 79999999887665443221  34566776665331       357899


Q ss_pred             EEEcCc
Q 025619          155 VICCTG  160 (250)
Q Consensus       155 vi~~Ag  160 (250)
                      ||-|.-
T Consensus       113 Vi~nPP  118 (201)
T d1wy7a1         113 VIMNPP  118 (201)
T ss_dssp             EEECCC
T ss_pred             EEEcCc
Confidence            998863

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=88.03  E-value=0.27  Score=35.72  Aligned_cols=64  Identities=22%  Similarity=0.343  Sum_probs=39.1

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEE-ecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~-~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+|.|.| +|.||+..++.+.+. +.+++++ +|+++...       ...  ..  +.   .+.... ..++|+|+.+..
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-------~~~--~~--~~---~~~~~~-~~~~D~Vvi~tp   67 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-------KTP--VF--DV---ADVDKH-ADDVDVLFLCMG   67 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-------SSC--EE--EG---GGGGGT-TTTCSEEEECSC
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-------ccc--cc--cc---hhhhhh-ccccceEEEeCC
Confidence            3688888 699999999999875 5676655 55543221       111  11  11   122222 467999998775


Q ss_pred             CC
Q 025619          161 TT  162 (250)
Q Consensus       161 ~~  162 (250)
                      ..
T Consensus        68 ~~   69 (170)
T d1f06a1          68 SA   69 (170)
T ss_dssp             TT
T ss_pred             Cc
Confidence            43

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.45  E-value=0.36  Score=38.72  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecChh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE  117 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~~  117 (250)
                      .+|+|+|.| +|--|..+|..|+++|  ++|+++.|+.+
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            458999999 5899999999999877  58999988753

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.35  E-value=0.34  Score=39.68  Aligned_cols=32  Identities=22%  Similarity=0.241  Sum_probs=24.5

Q ss_pred             CEEEEEcC------CChHH---HHHHHHHHHCCCeEEEEec
Q 025619           83 KLVLVAGG------SGGVG---QLVVASLLSRNIKSRLLLR  114 (250)
Q Consensus        83 k~vlVTGa------sG~IG---~~la~~L~~~G~~V~~~~R  114 (250)
                      |+||+.+.      +||+|   .+|+++|+++|++|.++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            35666554      58887   5579999999999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=87.32  E-value=0.99  Score=32.17  Aligned_cols=99  Identities=17%  Similarity=0.160  Sum_probs=57.2

Q ss_pred             EEEEEcCCChHHHH-HHHHHHHC-CCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCcC
Q 025619           84 LVLVAGGSGGVGQL-VVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT  161 (250)
Q Consensus        84 ~vlVTGasG~IG~~-la~~L~~~-G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag~  161 (250)
                      +|.|.| +|++|.. ....|.+. +.+++++++++++.+.+.+.+.....      .+|   +++.+-.++|+|+-+...
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~------~~~---~~~ll~~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSAT------CTD---YRDVLQYGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCC------CSS---TTGGGGGCCSEEEECSCG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccc------ccc---HHHhcccccceecccccc
Confidence            688888 5888966 55666555 45788889999888877655432111      122   232222368998876533


Q ss_pred             CCc-CC----CCCCC---CCCcceehHHHHHHHHHHccC
Q 025619          162 TAF-PS----RRWDG---DNTPEKVDWEGVRNLVSALPS  192 (250)
Q Consensus       162 ~~~-~~----~~~~~---~~~~~~~N~~g~~~l~~a~~~  192 (250)
                      ... +.    .....   .+.....|......+.+++++
T Consensus        73 ~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~  111 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEK  111 (167)
T ss_dssp             GGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccCCCCcCCHHHHHHHHHHHHH
Confidence            210 00    00000   122336688888888888754

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.72  E-value=1.4  Score=33.48  Aligned_cols=77  Identities=17%  Similarity=0.141  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .|.+||=.|++ |..-.++++ +...+-+|++++.++..++.+.+... ..++..+..|..+++..... ...+|++++.
T Consensus        73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~-~~~vD~i~~d  150 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRAL-VPKVDVIFED  150 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTT-CCCEEEEEEC
T ss_pred             CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccccc-ccceEEEEEE
Confidence            57789988855 555566666 44446789999999987776644332 45677888999888776643 5678999875


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      .
T Consensus       151 ~  151 (227)
T d1g8aa_         151 V  151 (227)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.46  E-value=2  Score=31.22  Aligned_cols=72  Identities=11%  Similarity=0.074  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC-----cCCCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-----KQDEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~-----~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .+++||=.|+..|   .++..+++.+.+|++++.++...+...+     .+...+++++.+|+.+  .+.   -+..|.|
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~--~~~---~~~fD~I  123 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE--NVK---DRKYNKI  123 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT--TCT---TSCEEEE
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhh--hhc---cCCceEE
Confidence            4568888885444   2334556678899999999876555432     1224568888899865  233   2468999


Q ss_pred             EEcCc
Q 025619          156 ICCTG  160 (250)
Q Consensus       156 i~~Ag  160 (250)
                      +.+.-
T Consensus       124 i~~~p  128 (194)
T d1dusa_         124 ITNPP  128 (194)
T ss_dssp             EECCC
T ss_pred             EEccc
Confidence            98743

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.46  E-value=0.59  Score=36.04  Aligned_cols=35  Identities=14%  Similarity=0.230  Sum_probs=29.7

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHC-CCeEEEEec
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLR  114 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R  114 (250)
                      ++++|+|+|-| -|-+|.++++.|.+. |+.|+.+..
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence            47899999999 589999999999864 899887754

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.44  E-value=0.059  Score=40.92  Aligned_cols=26  Identities=23%  Similarity=0.277  Sum_probs=22.8

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeE
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKS  109 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V  109 (250)
                      ++|+|.| +|-+|..+|.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            4799999 6999999999999999753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.38  E-value=0.34  Score=36.09  Aligned_cols=32  Identities=25%  Similarity=0.255  Sum_probs=27.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecCh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP  116 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~  116 (250)
                      +|+|.| +|--|...|.+|.++|+ +|+++.++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            588888 69999999999999996 699998764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.06  E-value=0.52  Score=31.67  Aligned_cols=33  Identities=21%  Similarity=0.207  Sum_probs=27.4

Q ss_pred             CEEEEEcCCChHHHHHHHHHHH---CCCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~---~G~~V~~~~R~~  116 (250)
                      |+++|.| +|.+|-++|..|.+   .|.+|.++.|.+
T Consensus        19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence            6899999 69999999976654   488999998864

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=85.93  E-value=0.17  Score=36.92  Aligned_cols=30  Identities=23%  Similarity=0.243  Sum_probs=24.3

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL  113 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G~~V~~~~  113 (250)
                      .+|+|.| +|.+|.+++..|.+.|.++.++.
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEE
Confidence            3588889 79999999999999997654443

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=85.91  E-value=1.1  Score=35.00  Aligned_cols=74  Identities=18%  Similarity=0.172  Sum_probs=46.2

Q ss_pred             CEEEEEc-CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CC-CCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           83 KLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        83 k~vlVTG-asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      ++++-.| |+|.||..+++   ....+|++++.+++.++-..+.   .. ...+.+..+|+.+..  .. ..+++|+||.
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~--~~-~~~~fDlIVs  185 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF--KE-KFASIEMILS  185 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--GG-GTTTCCEEEE
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccccccc--cc-ccCcccEEEE
Confidence            3566444 55556655543   3568999999998876544321   11 235667778876542  22 1478999999


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      |--+.
T Consensus       186 NPPYI  190 (271)
T d1nv8a_         186 NPPYV  190 (271)
T ss_dssp             CCCCB
T ss_pred             ccccc
Confidence            97655

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.88  E-value=0.46  Score=34.91  Aligned_cols=33  Identities=24%  Similarity=0.222  Sum_probs=27.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHCC--CeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~G--~~V~~~~R~~  116 (250)
                      |+|+|.| +|.+|.++|..|.+.+  .+|+++.|+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            4788989 5799999999998874  5788888753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=85.83  E-value=1.6  Score=34.81  Aligned_cols=77  Identities=10%  Similarity=-0.049  Sum_probs=49.2

Q ss_pred             CCCCEEEEEc-CCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CCCCCeeEEEeeCCCccC-cchhhhCCCcE
Q 025619           80 SSSKLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKD-LDPAIFEGVTH  154 (250)
Q Consensus        80 ~~~k~vlVTG-asG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~~~~~~~v~~Dl~d~~~-~~~~~~~~~D~  154 (250)
                      .+|++||=.+ ++|+.+.++    ++.|.+|+.++.++..++.+.+.   ..-.+++++.+|..+... +... -+..|.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~-~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKE-GERFDL  218 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHT-TCCEEE
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhh-hcCCCE
Confidence            3677888766 556665443    34567999999999876665432   122467888888766322 2211 347899


Q ss_pred             EEEcCcC
Q 025619          155 VICCTGT  161 (250)
Q Consensus       155 vi~~Ag~  161 (250)
                      ||.+.-.
T Consensus       219 Vi~DpP~  225 (318)
T d1wxxa2         219 VVLDPPA  225 (318)
T ss_dssp             EEECCCC
T ss_pred             EEEcCCc
Confidence            9998643

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.70  E-value=0.42  Score=37.64  Aligned_cols=31  Identities=23%  Similarity=0.257  Sum_probs=27.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|--|...|.+|+++|++|+++.++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67888 68999999999999999999998754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.43  E-value=0.47  Score=33.59  Aligned_cols=30  Identities=17%  Similarity=0.308  Sum_probs=25.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      +|+|.| +|.+|.+++..|. ++.+|+++.|.
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~   31 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKE   31 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEecc
Confidence            688888 5899999999885 57899999874

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.32  E-value=0.53  Score=32.71  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=27.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHH----CCCeEEEEecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~----~G~~V~~~~R~~  116 (250)
                      .|+++|.| +|++|-+++..|.+    .|.+|+++.+++
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            46899998 59999999998863    589999988754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.25  E-value=0.43  Score=36.18  Aligned_cols=32  Identities=22%  Similarity=0.313  Sum_probs=28.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      |+|.| +|-.|...|..|+++|++|+++.+++.
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78888 589999999999999999999988753

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.20  E-value=1.2  Score=32.27  Aligned_cols=110  Identities=11%  Similarity=0.064  Sum_probs=62.0

Q ss_pred             EEEEEcCCChHHHHHHHHHHHC-CCeEEE-EecChhhHhhhhCcCCCC-CeeEEEeeCCCccCcchhh-hCCCcEEEEcC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAI-FEGVTHVICCT  159 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~-G~~V~~-~~R~~~~~~~~~~~~~~~-~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~A  159 (250)
                      +|.|.| +|.+|+..++.+... +.+|++ +++++++.+.+.+...-+ ...+       .+++++.+ -.++|+|+-+.
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI-------HGSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE-------ESSHHHHHHCTTCCEEEECC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee-------cCcHHHhhhccccceeeecc
Confidence            688888 588999999988775 567774 488888877665443211 1111       12344332 24689988765


Q ss_pred             cCCCc-CC----CCCC-C--CCCcceehHHHHHHHHHHccCCCCeEEEEcc
Q 025619          160 GTTAF-PS----RRWD-G--DNTPEKVDWEGVRNLVSALPSSLKRIVLVSS  202 (250)
Q Consensus       160 g~~~~-~~----~~~~-~--~~~~~~~N~~g~~~l~~a~~~~~~~iV~iSS  202 (250)
                      ..... ..    .... +  .+.....|......+++.+++. +..+.++-
T Consensus        75 p~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~-~~~~~v~~  124 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEAN-GVQIMDGT  124 (184)
T ss_dssp             CGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTT-TCCEEECC
T ss_pred             cchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhh-CCEEEEEE
Confidence            33210 00    0000 0  1223356788888888877543 22344443

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.17  E-value=1.1  Score=35.53  Aligned_cols=71  Identities=15%  Similarity=0.139  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChhhHh--hhhCc-CCCCCeeEEEeeCCCccCcchhhhCCCcEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKAT--TLFGK-QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI  156 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~~~~--~~~~~-~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi  156 (250)
                      ++|+||-.|+..|+   ++..+++.|+ +|++++.++....  +..+. .-..++.++.+|+.+.+.-    .+.+|+|+
T Consensus        33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~----~~~~D~iv  105 (316)
T d1oria_          33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP----VEKVDIII  105 (316)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SSCEEEEE
T ss_pred             CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccc----cceeEEEe
Confidence            67899999976664   4556777886 6999987753211  11111 1145688999998775322    24689998


Q ss_pred             Ec
Q 025619          157 CC  158 (250)
Q Consensus       157 ~~  158 (250)
                      ..
T Consensus       106 s~  107 (316)
T d1oria_         106 SE  107 (316)
T ss_dssp             EC
T ss_pred             ee
Confidence            75

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.14  E-value=0.29  Score=38.49  Aligned_cols=35  Identities=29%  Similarity=0.465  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCChHHHH-----HHHHHHHCCCeEEEEecChh
Q 025619           82 SKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~-----la~~L~~~G~~V~~~~R~~~  117 (250)
                      ||+|.|.| =||+|+-     ++..|+++|++|.+++-++.
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            57888987 8999975     57889999999999998763

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.99  E-value=2.1  Score=32.37  Aligned_cols=76  Identities=17%  Similarity=0.154  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCC-CCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .|.+||=.|++ |..-.++++. .. +..|++++.++..++.+.+... .+++..+.+|..++...... ...+|++++.
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~-~~~v~~i~~~  150 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANI-VEKVDVIYED  150 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT-CCCEEEEEEC
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccc-cceeEEeecc
Confidence            57799999965 4455666653 33 3489999999987666543322 46778888998888766543 3456666654


Q ss_pred             C
Q 025619          159 T  159 (250)
Q Consensus       159 A  159 (250)
                      .
T Consensus       151 ~  151 (230)
T d1g8sa_         151 V  151 (230)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.97  E-value=1.9  Score=34.27  Aligned_cols=73  Identities=15%  Similarity=0.092  Sum_probs=46.1

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh--hHhhhhCcC-CCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE--KATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~--~~~~~~~~~-~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .++|+||-.|+..|+   ++..++++|+ +|++++.++.  .+.+..... ...+++++.+|+.+...-    -+.+|+|
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~----~~~~D~i  109 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLP----FPKVDII  109 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS----SSCEEEE
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCc----ccceeEE
Confidence            367899999976653   3455677886 6888887752  111111111 145788899998765321    2468999


Q ss_pred             EEcC
Q 025619          156 ICCT  159 (250)
Q Consensus       156 i~~A  159 (250)
                      +..-
T Consensus       110 ~se~  113 (328)
T d1g6q1_         110 ISEW  113 (328)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            8754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.89  E-value=0.68  Score=31.36  Aligned_cols=32  Identities=19%  Similarity=0.366  Sum_probs=28.1

Q ss_pred             CEEEEEcCC---ChHHHHHHHHHHHCCCeEEEEec
Q 025619           83 KLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLR  114 (250)
Q Consensus        83 k~vlVTGas---G~IG~~la~~L~~~G~~V~~~~R  114 (250)
                      |.|.|.|+|   +-.|..+.+.|.+.|++|+.+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP   36 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   36 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence            689999998   67999999999999999887753

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.74  E-value=0.46  Score=37.33  Aligned_cols=31  Identities=35%  Similarity=0.522  Sum_probs=28.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|..|...|.+|+++|++|+++.+.+
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            88888 69999999999999999999998764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.71  E-value=0.69  Score=32.43  Aligned_cols=34  Identities=18%  Similarity=0.165  Sum_probs=29.7

Q ss_pred             CCEEEEEcCC---ChHHHHHHHHHHHCCCeEEEEecC
Q 025619           82 SKLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        82 ~k~vlVTGas---G~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      .|+|.|.|||   +..|..+++.|.+.|++|+.+..+
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            3689999999   789999999999999998887543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.51  E-value=1.2  Score=32.23  Aligned_cols=34  Identities=21%  Similarity=0.273  Sum_probs=25.8

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CeEEEE-ecCh
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLL-LRDP  116 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~-~R~~  116 (250)
                      ..+|.|-| -|-||+.+++.+.++. .+|+.+ +..+
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~   37 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKP   37 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSC
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCC
Confidence            35899999 6999999999998764 566655 4443

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.23  E-value=0.54  Score=37.91  Aligned_cols=30  Identities=17%  Similarity=0.197  Sum_probs=27.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      |+|.| +|.-|..+|.+|+++|++|+++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            67888 7999999999999999999999773

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.09  E-value=0.69  Score=31.63  Aligned_cols=74  Identities=18%  Similarity=0.194  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCC----------hHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hC
Q 025619           82 SKLVLVAGGSG----------GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FE  150 (250)
Q Consensus        82 ~k~vlVTGasG----------~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~  150 (250)
                      .|+|||.|+..          .-+.+.+++|.+.|++++++.-|++...--.+.  ..++   ..+--..+.+.+.+ ..
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~--aD~l---Yfeplt~e~v~~Ii~~E   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT--SDRL---YFEPVTLEDVLEIVRIE   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS--SSEE---ECCCCSHHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh--cCce---EEccCCHHHHHHHHHHh
Confidence            46899999754          678899999999999999999998765421111  1122   12212233333321 45


Q ss_pred             CCcEEEEcCc
Q 025619          151 GVTHVICCTG  160 (250)
Q Consensus       151 ~~D~vi~~Ag  160 (250)
                      ++|.|+-..|
T Consensus        79 ~p~~ii~~~G   88 (121)
T d1a9xa4          79 KPKGVIVQYG   88 (121)
T ss_dssp             CCSEEECSSS
T ss_pred             CCCEEEeehh
Confidence            8898886655

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.80  E-value=2.2  Score=32.94  Aligned_cols=76  Identities=12%  Similarity=0.061  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC---C-CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~---~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .+.+||=.|+. |+....++++   .|++|++++-++..++...+..   . ..+++++.+|..+.. +.   -+.+|+|
T Consensus        67 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-~~---~~sfD~V  139 (282)
T d2o57a1          67 RQAKGLDLGAGYGGAARFLVRK---FGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CE---DNSYDFI  139 (282)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SC---TTCEEEE
T ss_pred             CCCEEEEeCCCCcHHHhhhhcc---CCcEEEEEeccchhhhhhhccccccccccccccccccccccc-cc---ccccchh
Confidence            46789999864 4444444332   2889999999887654433211   1 357899999987743 22   2568999


Q ss_pred             EEcCcCCC
Q 025619          156 ICCTGTTA  163 (250)
Q Consensus       156 i~~Ag~~~  163 (250)
                      +..-...+
T Consensus       140 ~~~~~l~h  147 (282)
T d2o57a1         140 WSQDAFLH  147 (282)
T ss_dssp             EEESCGGG
T ss_pred             hccchhhh
Confidence            87655443

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=83.49  E-value=1.8  Score=32.36  Aligned_cols=75  Identities=11%  Similarity=0.079  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CCCCCeeEEEeeCCCccCcchhhhCCCcEEEE
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC  157 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~  157 (250)
                      .+++||=.|+..|.   ++..|+++|.+|++++-+++-++...+.   ....++.++.+|+.+.. +.   -+.+|+|+.
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~---~~~fD~v~~   88 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FP---DDSFDIITC   88 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SC---TTCEEEEEE
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-cc---ccccceeee
Confidence            46689999977663   4456677889999999998765443221   12356888999986532 22   256898887


Q ss_pred             cCcCC
Q 025619          158 CTGTT  162 (250)
Q Consensus       158 ~Ag~~  162 (250)
                      +-...
T Consensus        89 ~~~l~   93 (234)
T d1xxla_          89 RYAAH   93 (234)
T ss_dssp             ESCGG
T ss_pred             eceee
Confidence            65443

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.49  E-value=0.55  Score=33.33  Aligned_cols=39  Identities=26%  Similarity=0.158  Sum_probs=30.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhC
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG  124 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~  124 (250)
                      +|-+.| .|-+|..+++.|++.|+.+ +..|+.++...+.+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            477778 5999999999999988865 57787776655543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.45  E-value=2.1  Score=31.25  Aligned_cols=76  Identities=25%  Similarity=0.257  Sum_probs=50.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhh-hCCCcEEEEcCcCCC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTGTTA  163 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~-~~~~D~vi~~Ag~~~  163 (250)
                      ++|=+ |=|-|.+ .+++++++.+|++++|+++.++...+. ...++.++..+..+.+...... .+++|.|+-.-|+..
T Consensus        21 ~~vD~-T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~-~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          21 VYVDA-TLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL-HLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             EEEET-TCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT-CCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             EEEEe-CCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc-cccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence            44543 3333334 456677788999999999877654432 3568889998888755443221 457999999888865

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.44  E-value=0.66  Score=34.52  Aligned_cols=37  Identities=24%  Similarity=0.299  Sum_probs=32.5

Q ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        79 ~~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      +++||+|+|.| +|--|-.+|.++++.+.+++.+.|..
T Consensus        29 ~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence            57899999998 57789999999999999988888765

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=83.21  E-value=0.66  Score=36.04  Aligned_cols=70  Identities=16%  Similarity=0.105  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC--CCCCeeEEEeeCCCccCcchhhhCCCcEEEEc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC  158 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~  158 (250)
                      .+++||=.|+..|+   ++..+++.|++|++++.+++.++...+..  .+.+.+++.+|+.+.  +.   .+..|+|+.|
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~--~~---~~~fD~V~an  191 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LP---FGPFDLLVAN  191 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GG---GCCEEEEEEE
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc--cc---ccccchhhhc
Confidence            57899999977775   33456778999999999998766554321  133456677765431  11   3578999876

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=83.19  E-value=1.1  Score=32.81  Aligned_cols=30  Identities=23%  Similarity=0.364  Sum_probs=24.9

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCC-CeEEEEec
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLR  114 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G-~~V~~~~R  114 (250)
                      +|.|-| .|-||+.++|.+.+++ .+|+++..
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            688888 8999999999999874 67777643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.90  E-value=0.82  Score=34.71  Aligned_cols=33  Identities=33%  Similarity=0.361  Sum_probs=28.7

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCC-eEEEEecChh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE  117 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~-~V~~~~R~~~  117 (250)
                      +|+|.| +|--|..+|..|.++|. +|+++.|+++
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            689999 59999999999999995 8889888653

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.70  E-value=0.71  Score=34.17  Aligned_cols=30  Identities=20%  Similarity=0.252  Sum_probs=27.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      ++|.|| |..|...+..+++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            788885 999999999999999999999875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.88  E-value=1.1  Score=33.87  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHH-HCC----CeEEEEecChhhHhhhhCc--------CCCCCeeEEEeeCCCccCcchh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLL-SRN----IKSRLLLRDPEKATTLFGK--------QDEETLQVCKGDTRNPKDLDPA  147 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~-~~G----~~V~~~~R~~~~~~~~~~~--------~~~~~~~~v~~Dl~d~~~~~~~  147 (250)
                      .+.+||..|+.+|--.++..+++ ..|    .+|+.+.++++-.+...+.        ....++.++.+|..+.  ... 
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~--~~~-  156 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG--YPP-  156 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC--CGG-
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc--ccc-
Confidence            45799999976666666555555 455    4899999988654433211        1124678888887542  221 


Q ss_pred             hhCCCcEEEEcCcCC
Q 025619          148 IFEGVTHVICCTGTT  162 (250)
Q Consensus       148 ~~~~~D~vi~~Ag~~  162 (250)
                       .+..|.|+..++..
T Consensus       157 -~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         157 -NAPYNAIHVGAAAP  170 (223)
T ss_dssp             -GCSEEEEEECSCBS
T ss_pred             -ccceeeEEEEeech
Confidence             35789999988764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=81.84  E-value=2  Score=30.95  Aligned_cols=31  Identities=26%  Similarity=0.351  Sum_probs=24.9

Q ss_pred             CCEEEEEcCCChHHHHHHHHHHHCC-CeEEEEe
Q 025619           82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLL  113 (250)
Q Consensus        82 ~k~vlVTGasG~IG~~la~~L~~~G-~~V~~~~  113 (250)
                      |++|.|-| -|-||+.+.|.+..++ .+|+.+.
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaIn   32 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVS   32 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEe
Confidence            46899987 7999999999998876 4666553

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=81.73  E-value=1  Score=32.73  Aligned_cols=71  Identities=17%  Similarity=0.242  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCc---CC-CCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QD-EETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~---~~-~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .+.+||=.|+. |.++    ..|++.+.+|++++.+++.++...+.   .. ..+++++.+|..+..  ..  .+.+|.+
T Consensus        33 ~g~~VLDiGcGsG~~s----~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~--~~--~~~~D~v  104 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVT----LELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL--CK--IPDIDIA  104 (186)
T ss_dssp             TTCEEEEESCTTSHHH----HHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH--TT--SCCEEEE
T ss_pred             CCCEEEEEECCeEccc----ccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcc--cc--cCCcCEE
Confidence            45688888854 4444    34566778999999999876655432   22 357888888864321  11  3568999


Q ss_pred             EEcC
Q 025619          156 ICCT  159 (250)
Q Consensus       156 i~~A  159 (250)
                      +.+.
T Consensus       105 ~~~~  108 (186)
T d1l3ia_         105 VVGG  108 (186)
T ss_dssp             EESC
T ss_pred             EEeC
Confidence            8764

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.60  E-value=0.73  Score=35.73  Aligned_cols=33  Identities=18%  Similarity=0.315  Sum_probs=29.0

Q ss_pred             CEEEEEcCCChHHHHHHHHHHHC-CCeEEEEecCh
Q 025619           83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDP  116 (250)
Q Consensus        83 k~vlVTGasG~IG~~la~~L~~~-G~~V~~~~R~~  116 (250)
                      .-|+|.|| |--|..+|.+|+++ |++|+++.+++
T Consensus        34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            35999996 99999999999875 99999999875

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.50  E-value=0.71  Score=36.59  Aligned_cols=32  Identities=22%  Similarity=0.176  Sum_probs=28.8

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      .|+|.| +|.-|..++.+|.++|.+|+++.+++
T Consensus         9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            589999 58999999999999999999998754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.41  E-value=1.2  Score=31.61  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=28.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCe-EEEEecCh
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP  116 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~-V~~~~R~~  116 (250)
                      .+++|+|.| +|.+|...|..+.+.|++ |+++.|+.
T Consensus        44 ~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            356788887 699999999999999985 77777653

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=81.25  E-value=2.3  Score=31.58  Aligned_cols=71  Identities=17%  Similarity=0.101  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcCc
Q 025619           81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG  160 (250)
Q Consensus        81 ~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~Ag  160 (250)
                      .+++||=.|++.|.   .+..|++.|++|++++.+++.++.+.+..   ....+.+|+.+.. ..   -+..|+|+....
T Consensus        42 ~~~~vLDiGcG~G~---~~~~l~~~~~~v~giD~s~~~l~~a~~~~---~~~~~~~~~~~l~-~~---~~~fD~ii~~~~  111 (246)
T d2avna1          42 NPCRVLDLGGGTGK---WSLFLQERGFEVVLVDPSKEMLEVAREKG---VKNVVEAKAEDLP-FP---SGAFEAVLALGD  111 (246)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHTTTCEEEEEESCHHHHHHHHHHT---CSCEEECCTTSCC-SC---TTCEEEEEECSS
T ss_pred             CCCEEEEECCCCch---hcccccccceEEEEeeccccccccccccc---ccccccccccccc-cc---cccccceeeecc
Confidence            34689988865442   34567788999999999988776655432   2235677776642 11   256899987665


Q ss_pred             C
Q 025619          161 T  161 (250)
Q Consensus       161 ~  161 (250)
                      +
T Consensus       112 ~  112 (246)
T d2avna1         112 V  112 (246)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=81.20  E-value=1.2  Score=33.42  Aligned_cols=71  Identities=8%  Similarity=0.025  Sum_probs=49.0

Q ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcCCCCCeeEEEeeCCCccCcchhhhCCCcEEEEcC
Q 025619           80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT  159 (250)
Q Consensus        80 ~~~k~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~~D~vi~~A  159 (250)
                      .++++||=.|++.|   .+++.|+++|++|++++-+++.++...+.. ..++.++.+|+.+...     -+..|+|+...
T Consensus        19 ~~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~-~~~~~~~~~~~~~~~~-----~~~fD~I~~~~   89 (225)
T d2p7ia1          19 FRPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRL-KDGITYIHSRFEDAQL-----PRRYDNIVLTH   89 (225)
T ss_dssp             CCSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHS-CSCEEEEESCGGGCCC-----SSCEEEEEEES
T ss_pred             CCCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhccc-cccccccccccccccc-----ccccccccccc
Confidence            35567898886554   234668888999999999988776654433 3468888887765431     24689888653

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=81.07  E-value=1.9  Score=33.16  Aligned_cols=72  Identities=14%  Similarity=0.174  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCC-ChHHHHHHHHHHHCCCeEEEEecChhhHhhhhCcC----CCCCeeEEEeeCCCccCcchhhhCCCcEE
Q 025619           81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEGVTHV  155 (250)
Q Consensus        81 ~~k~vlVTGas-G~IG~~la~~L~~~G~~V~~~~R~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~~~~~~~~~~D~v  155 (250)
                      .|++||=.|+. |++..++++.+ ..+.+|+.++++++.++.+.+.+    ...++++..+|+.+.  +.   -+.+|.|
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v-~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~--~~---~~~fD~V  158 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYAL-NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--IS---DQMYDAV  158 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHH-TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CC---SCCEEEE
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc--cc---cceeeee
Confidence            47899999955 55666666655 34568999999998766554322    245788888888753  22   1457998


Q ss_pred             EEc
Q 025619          156 ICC  158 (250)
Q Consensus       156 i~~  158 (250)
                      +.+
T Consensus       159 ~ld  161 (250)
T d1yb2a1         159 IAD  161 (250)
T ss_dssp             EEC
T ss_pred             eec
Confidence            865

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=80.88  E-value=0.74  Score=36.44  Aligned_cols=31  Identities=35%  Similarity=0.538  Sum_probs=28.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEecCh
Q 025619           85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP  116 (250)
Q Consensus        85 vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~  116 (250)
                      |+|.| +|..|...|.+|+++|++|+++.+.+
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88888 69999999999999999999998754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.82  E-value=0.67  Score=36.79  Aligned_cols=26  Identities=23%  Similarity=0.307  Sum_probs=23.3

Q ss_pred             CCChHHHHHHHHHHHCCCeEEEEecC
Q 025619           90 GSGGVGQLVVASLLSRNIKSRLLLRD  115 (250)
Q Consensus        90 asG~IG~~la~~L~~~G~~V~~~~R~  115 (250)
                      .||-.|.++|++++.+|++|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            36899999999999999999999765

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=80.70  E-value=0.82  Score=34.85  Aligned_cols=33  Identities=15%  Similarity=0.238  Sum_probs=29.4

Q ss_pred             EEEEEcCCChHHHHHHHHHHHCCCeEEEEecChh
Q 025619           84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE  117 (250)
Q Consensus        84 ~vlVTGasG~IG~~la~~L~~~G~~V~~~~R~~~  117 (250)
                      -|+|.| +|--|...|.+|+++|.+|+++.+++.
T Consensus         6 DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            488888 599999999999999999999998764